# terms

id: PBO:0053973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1284","termid":"PBO:0053973"}


id: PBO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.20","termid":"PBO:0000798"}


id: PBO:0040601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 5","termid":"PBO:0040601"}


id: PBO:0005714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp0 (predicted)","termid":"PBO:0005714"}


id: RO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_starts","termid":"RO:0002088"}


id: PBO:0040431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting beta","termid":"PBO:0040431"}


id: POMBASE_GENE_EX_REL:directly_localizes
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"_global:has_input"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_localizes","termid":"POMBASE_GENE_EX_REL:directly_localizes"}


id: PBO:0030284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sulfide","termid":"PBO:0030284"}


id: GO:0002833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to biotic stimulus","synonyms":[{"name":"activation of response to biotic stimulus","type":"narrow"},{"name":"stimulation of response to biotic stimulus","type":"narrow"},{"name":"up regulation of response to biotic stimulus","type":"exact"},{"name":"up-regulation of response to biotic stimulus","type":"exact"},{"name":"upregulation of response to biotic stimulus","type":"exact"}],"termid":"GO:0002833"}


id: PBO:0080787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 7","termid":"PBO:0080787"}


id: PBO:0091771
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CeNTaurin b5-like gene","termid":"PBO:0091771"}


id: PBO:0068227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 534","termid":"PBO:0068227"}


id: GO:0099172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynapse organization","synonyms":[{"name":"presynapse development","type":"exact"},{"name":"presynapse morphogenesis","type":"related"},{"name":"presynapse organisation","type":"exact"},{"name":"presynapse organization and biogenesis","type":"related"}],"termid":"GO:0099172"}


id: GO:0140649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a hyphal filament from one host cell to another. This process involves the clearance of plant-derived plasmodesmal occlusion materials, cytoskeleton based constriction of invasive hypha to traverse plasmodesmata. Septins and F-actin are reorganized into an hourglass shape at the point of maximum hyphal constriction.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-to-cell migration by invasive hypha","synonyms":[{"name":"host tissue colonization","type":"broad"},{"name":"invasive growth","type":"broad"},{"name":"invasive hyphae formation","type":"exact"},{"name":"plant tissue colonization","type":"broad"}],"termid":"GO:0140649"}


id: PBO:0074852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 41","termid":"PBO:0074852"}


id: FYPO:0001184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal maltase activity","synonyms":[{"name":"abnormal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001184"}


id: GO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming a pro-T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell lineage commitment","synonyms":[{"name":"pro-T cell fate commitment","type":"exact"},{"name":"pro-T lymphocyte fate commitment","type":"exact"},{"name":"pro-T lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002680"}


id: FYPO:0003559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to doxorubicin. Cells stop growing (and may die) at a concentration of doxorubicin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to doxorubicin","synonyms":[{"name":"hypersensitive to doxorubicin","type":"exact"},{"name":"sensitive to doxorubicin during mitotic cell cycle","type":"related"},{"name":"sensitive to doxorubicin during vegetative growth","type":"exact"}],"termid":"FYPO:0003559"}


id: GO:0015229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-ascorbate from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-198870"],"synonyms":[{"name":"L-ascorbate transporter activity","type":"exact"},{"name":"vitamin C transporter activity","type":"exact"}],"termid":"GO:0015229"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: MOD:01714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01714"}


id: GO:0032791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lead (Pb) ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lead ion binding","termid":"GO:0032791"}


id: PBO:0086317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to cyclin-dependent kinase inhibitors; downregulates low-affinity phosphate transport during phosphate limitation by targeting Pho87p to the vacuole; upstream region harbors putative hypoxia response element (HRE) cluster; overproduction suppresses a plc1 null mutation; promoter shows an increase in Snf2p occupancy after heat shock; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0086317"}


id: PATO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having or resembling the shape of a telescope.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telescopic","termid":"PATO:0002313"}


id: GO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"positively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone biosynthetic process","synonyms":[{"name":"activation of hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of hormone anabolism","type":"exact"},{"name":"positive regulation of hormone biosynthesis","type":"exact"},{"name":"positive regulation of hormone formation","type":"exact"},{"name":"positive regulation of hormone synthesis","type":"exact"},{"name":"stimulation of hormone biosynthetic process","type":"narrow"},{"name":"up regulation of hormone biosynthetic process","type":"exact"},{"name":"up-regulation of hormone biosynthetic process","type":"exact"},{"name":"upregulation of hormone biosynthetic process","type":"exact"}],"termid":"GO:0046886"}


id: GO:0032186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Control of the formation, spatial distribution, and breakdown of a septin ring located at the bud neck.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring organization","termid":"GO:0031106"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"part_of","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0007010","GO:0000281"],"is_obsolete":false,"name":"cellular bud neck septin ring organization","synonyms":[{"name":"cellular bud neck septin ring organisation","type":"exact"}],"termid":"GO:0032186"}


id: PBO:0056884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 4","termid":"PBO:0056884"}


id: GO:0047768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 3-carboxy-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.5","RHEA:14977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0009975","GO:0003674"],"is_obsolete":false,"name":"carboxy-cis,cis-muconate cyclase activity","secondary_identifiers":["MetaCyc:CARBOXY-CISCIS-MUCONATE-CYCLASE-RXN","KEGG_REACTION:R03308"],"synonyms":[{"name":"3-carboxy-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"},{"name":"3-carboxy-cis,cis-muconate lactonizing enzyme activity","type":"related"},{"name":"3-carboxymuconate cyclase activity","type":"related"}],"termid":"GO:0047768"}


id: PBO:0067560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 713, pseudogene","termid":"PBO:0067560"}


id: GO:0097579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining copper ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mr","PMID:3099306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of copper ion","termid":"GO:0097578"},{"relation_name":"part_of","term_name":"intracellular copper ion homeostasis","termid":"GO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extracellular sequestering of copper ion","synonyms":[{"name":"extracellular copper ion retention","type":"exact"},{"name":"extracellular copper ion sequestering","type":"exact"},{"name":"extracellular copper ion sequestration","type":"exact"},{"name":"extracellular copper ion storage","type":"exact"},{"name":"extracellular retention of copper ion","type":"exact"},{"name":"extracellular sequestration of copper ion","type":"exact"},{"name":"extracellular storage of copper ion","type":"exact"}],"termid":"GO:0097579"}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: GO:0070139
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74160,101570],"is_not":false,"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within the small conjugating protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein-specific endopeptidase activity","termid":"GO:0070137"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0016787","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"SUMO-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2990842","Reactome:R-HSA-2990840","Reactome:R-HSA-2993763"],"termid":"GO:0070139","terms_by_termid":{"GO:0070139":null}}


id: PBO:0039769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 4","termid":"PBO:0039769"}


id: GO:0010538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of the Hsp27 molecular chaperone.","definition_xrefs":["GOC:dph","PMID:11546764","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp27 protein regulator activity (obsolete GO:0010538)","synonyms":[{"name":"Hsp27 protein regulator activity","type":"exact"}],"termid":"GO:0010538"}


id: PBO:0084505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific regulatory subunit of the Glc7p protein phosphatase; regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p","termid":"PBO:0084505"}


id: GO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"respiratory burst","termid":"GO:0045730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory burst","termid":"GO:0060263"}


id: GO:1904463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosteryl 3-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:26116408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"saponin biosynthetic process","termid":"GO:0016135"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"},{"relation_name":"is_a","term_name":"ergosteryl 3-beta-D-glucoside metabolic process","termid":"GO:1904461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosteryl 3-beta-D-glucoside biosynthetic process","synonyms":[{"name":"ergosteryl 3-beta-D-glucoside anabolism","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside biosynthesis","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside formation","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside synthesis","type":"exact"}],"termid":"GO:1904463"}


id: PBO:0036165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036165"}


id: PBO:0066881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 181","termid":"PBO:0066881"}


id: GO:0047684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + an arylamine = UDP + an N-D-glucosylarylamine.","definition_xrefs":["EC:2.4.1.71","MetaCyc:ARYLAMINE-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"arylamine glucosyltransferase activity","synonyms":[{"name":"UDP glucose-arylamine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-arylamine glucosyltransferase activity","type":"related"}],"termid":"GO:0047684"}


id: FYECO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lysine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lys","synonyms":[{"name":"lysine added","type":"exact"}],"termid":"FYECO:0000199"}


id: PBO:0080220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog","termid":"PBO:0080220"}


id: PBO:0066014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 1","termid":"PBO:0066014"}


id: FYPO:0007356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Smp focus formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal Smp focus formation","synonyms":[{"name":"normal Sme2 focus formation","type":"narrow"},{"name":"normal Smp dot formation","type":"exact"},{"name":"normal Smp focus assembly","type":"exact"}],"termid":"FYPO:0007356"}


id: PR:Q9UTK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein NOB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01341","PRO:DNx","PANTHER:PTHR12814:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S-pre-rRNA D-site endonuclease nob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.09","secondary_identifiers":["UniProtKB:Q9UTK0"],"synonyms":[{"name":"Spom972h-NOB1","type":"exact"},{"name":"pre-rRNA-processing endonuclease nob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK0"}


id: GO:0019216
data:
  {"annotated_genes":["SJAG_03940","SJAG_02044","SJAG_04092","SJAG_03130","SJAG_02380","SJAG_04018","SJAG_01906","SJAG_02104","SJAG_01187","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113270],"is_not":false,"summary":null,"term":"GO:0019216"},{"annotations":[89517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[70895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[110741,106716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[108069,105115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[105231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[74954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[84332,101276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01307":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null,"SJAG_04018":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of lipid metabolism","type":"exact"}],"termid":"GO:0019216","terms_by_termid":{"GO:0010895":null,"GO:0019216":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0070452":null,"GO:0071072":null,"GO:2001211":null}}


id: GO:1903017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["GOC:TermGenie","GOC:rl","GO_REF:0000059","PMID:23544079","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of exo-alpha-sialidase activity","termid":"GO:1903015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exo-alpha-sialidase activity","synonyms":[{"name":"activation of N-acylneuraminate glycohydrolase activity","type":"narrow"},{"name":"activation of acetylneuraminidase activity","type":"narrow"},{"name":"activation of acetylneuraminyl hydrolase activity","type":"narrow"},{"name":"activation of alpha-neuraminidase activity","type":"narrow"},{"name":"activation of exo-alpha-sialidase activity","type":"narrow"},{"name":"activation of neuraminidase activity","type":"narrow"},{"name":"activation of sialidase activity","type":"narrow"},{"name":"positive regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"positive regulation of acetylneuraminidase activity","type":"exact"},{"name":"positive regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"positive regulation of alpha-neuraminidase activity","type":"exact"},{"name":"positive regulation of neuraminidase activity","type":"exact"},{"name":"positive regulation of sialidase activity","type":"exact"},{"name":"up regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up regulation of acetylneuraminidase activity","type":"exact"},{"name":"up regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up regulation of neuraminidase activity","type":"exact"},{"name":"up regulation of sialidase activity","type":"exact"},{"name":"up-regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up-regulation of acetylneuraminidase activity","type":"exact"},{"name":"up-regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up-regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up-regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up-regulation of neuraminidase activity","type":"exact"},{"name":"up-regulation of sialidase activity","type":"exact"},{"name":"upregulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"upregulation of acetylneuraminidase activity","type":"exact"},{"name":"upregulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"upregulation of alpha-neuraminidase activity","type":"exact"},{"name":"upregulation of exo-alpha-sialidase activity","type":"exact"},{"name":"upregulation of neuraminidase activity","type":"exact"},{"name":"upregulation of sialidase activity","type":"exact"}],"termid":"GO:1903017"}


id: GO:2001264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of C-C chemokine binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine binding","termid":"GO:2001263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of C-C chemokine binding","termid":"GO:2001264"}


id: PBO:0088269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex beta subunit Apl1","termid":"PBO:0088269"}


id: PBO:0029896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint","termid":"PBO:0029896"}


id: PBO:0041946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 6","termid":"PBO:0041946"}


id: PBO:0090191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, conserved in fungi plants and protozoa","termid":"PBO:0090191"}


id: PBO:0030699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_catalase_activity","termid":"PBO:0030699"}


id: GO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"negatively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of catagen","synonyms":[{"name":"down regulation of catagen","type":"related"},{"name":"down-regulation of catagen","type":"related"},{"name":"downregulation of catagen","type":"related"},{"name":"inhibition of catagen","type":"narrow"},{"name":"negative regulation of catagen","type":"related"}],"termid":"GO:0051796"}


id: FYPO:0006675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed during conjugation in which a pattern of transcriptional regulation that normally differs between parental genomes has the opposite parental specificity compared to normal. For example, a gene that is normally transcribed first from the P (h+) parental genome is instead transcribed from the M (h-) genome earlier.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"reversed parental genome-dependent asymmetric transcription","synonyms":[{"name":"reversed asymmetric transcription from parental genomes","type":"exact"},{"name":"reversed parental genome-dependent transcriptional asymmetry","type":"exact"}],"termid":"FYPO:0006675"}


id: GO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs when the cell is in a non-dividing, or quiescent, state.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete chronological cell aging (obsolete GO:0001300)","synonyms":[{"name":"chronological cell ageing","type":"exact"}],"termid":"GO:0001300"}


id: PBO:0056655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 22","termid":"PBO:0056655"}


id: PBO:0068149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 456","termid":"PBO:0068149"}


id: PBO:0030793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_morphology","termid":"PBO:0030793"}


id: PBO:0028617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2_snRNP_binding","termid":"PBO:0028617"}


id: SO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding aspartyl tRNA (SO:0000257).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic_acid_tRNA_primary_transcript","synonyms":[{"name":"aspartic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000214"}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: PBO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinates updated from 3789585..3789948 to 3789400..3789948","termid":"PBO:0013794"}


id: GO:1903914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:23575248","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral entry into host cell","termid":"GO:0046597"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of fusion of virus membrane with host plasma membrane","termid":"GO:1903913"},{"relation_name":"negatively_regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"down regulation of viral-cell fusion molecule activity","type":"related"},{"name":"down regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down-regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down-regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down-regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down-regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down-regulation of viral-cell fusion molecule activity","type":"related"},{"name":"downregulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"downregulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"downregulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"downregulation of viral penetration via membrane fusion","type":"exact"},{"name":"downregulation of viral-cell fusion molecule activity","type":"related"},{"name":"inhibition of fusion of virus membrane with host plasma membrane","type":"narrow"},{"name":"inhibition of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"inhibition of viral envelope fusion with host cell membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host plasma membrane","type":"narrow"},{"name":"inhibition of viral penetration via membrane fusion","type":"narrow"},{"name":"inhibition of viral-cell fusion molecule activity","type":"related"},{"name":"negative regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"negative regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"negative regulation of viral penetration via membrane fusion","type":"exact"},{"name":"negative regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903914"}


id: PBO:0067897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 199","termid":"PBO:0067897"}


id: GO:0015230
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73409],"is_not":false,"summary":null,"term":"GO:0015230"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of flavin-adenine dinucleotide (FAD) from one side of a membrane to the other. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"FAD transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0005472"],"synonyms":[{"name":"FAD carrier activity","type":"related"},{"name":"FAD transporter activity","type":"broad"},{"name":"flavin adenine dinucleotide carrier activity","type":"related"},{"name":"flavin adenine dinucleotide transmembrane transporter activity","type":"exact"},{"name":"flavin-adenine dinucleotide carrier activity","type":"related"},{"name":"flavin-adenine dinucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015230","terms_by_termid":{"GO:0015230":null}}


id: PBO:0041260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 230","termid":"PBO:0041260"}


id: PBO:0050482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA10 antisense RNA","termid":"PBO:0050482"}


id: PBO:0043515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 4","termid":"PBO:0043515"}


id: PBO:0076576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 4","termid":"PBO:0076576"}


id: MOD:00332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glucosyl-arginine.","definition_xrefs":["RESID:AA0327","PubMed:8521968","PubMed:15279557","Unimod:41#R","PubMed:9536051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"omega-N-glycosyl-L-arginine","termid":"MOD:01980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"omega-N-glucosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc) arginine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:00332"}


id: PBO:0064194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 2","termid":"PBO:0064194"}


id: PBO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains","termid":"PBO:0090444"}


id: PBO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type proton ATPase, P3-type Pma1","termid":"PBO:0002263"}


id: PBO:0073199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEM1 pseudogene 1","termid":"PBO:0073199"}


id: GO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the swim bladder. This process pertains to the initial formation of a structure from unspecified parts. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"swim bladder morphogenesis","termid":"GO:0048795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder formation","synonyms":[{"name":"gas bladder biosynthesis","type":"exact"},{"name":"gas bladder formation","type":"exact"}],"termid":"GO:0048797"}


id: PBO:0031133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_nitrogen_starvation","termid":"PBO:0031133"}


id: PBO:0031015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_vanadate","termid":"PBO:0031015"}


id: GO:0097009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the balance between food intake (energy input) and energy expenditure.","definition_xrefs":["GOC:yaf","PMID:15919751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy homeostasis","secondary_identifiers":["GO:2000507","GO:2000505","GO:2000506"],"synonyms":[{"name":"negative regulation of energy homeostasis","type":"related"},{"name":"positive regulation of energy homeostasis","type":"related"},{"name":"regulation of energy homeostasis","type":"related"}],"termid":"GO:0097009"}


id: GO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichloroethylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce"],"synonyms":[{"name":"TCE metabolic process","type":"exact"},{"name":"TCE metabolism","type":"exact"},{"name":"trichloroethene metabolic process","type":"exact"},{"name":"trichloroethene metabolism","type":"exact"},{"name":"trichloroethylene metabolism","type":"exact"}],"termid":"GO:0018979"}


id: PBO:0090537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine aminotransferase Alt1","termid":"PBO:0090537"}


id: FYPO:0000042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires sulfite in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for sulfite","synonyms":[{"name":"growth auxotrophic for sulfite during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for sulfite during vegetative growth","type":"exact"},{"name":"growth auxotrophic for sulphite","type":"exact"},{"name":"sulfite auxotrophy","type":"exact"}],"termid":"FYPO:0000042"}


id: GO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","OMIM:602754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel activity","synonyms":[{"name":"SK KCa channels","type":"exact"},{"name":"SK calcium-activated potassium channel activity","type":"exact"},{"name":"small conductance KCa channels","type":"exact"}],"termid":"GO:0016286"}


id: GO:0140157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an ammonium ion from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:16999738","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium transmembrane transport","termid":"GO:0072488"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"ammonium import across plasma membrane","termid":"GO:0140157"}


id: GO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate.","definition_xrefs":["EC:1.13.11.34","RHEA:32307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-9018859","Reactome:R-HSA-9020256","Reactome:R-HSA-9020259","Reactome:R-HSA-9020277","Reactome:R-HSA-9018863","Reactome:R-HSA-9020278","Reactome:R-HSA-9025996","Reactome:R-HSA-9025999","Reactome:R-HSA-9026005","Reactome:R-HSA-9018894","Reactome:R-HSA-9027628","Reactome:R-HSA-9027633","Reactome:R-HSA-9018858","Reactome:R-HSA-9025995","Reactome:R-HSA-9026405","Reactome:R-HSA-9020282","Reactome:R-HSA-9020251","Reactome:R-HSA-9020264","MetaCyc:ARACHIDONATE-5-LIPOXYGENASE-RXN","Reactome:R-HSA-9024997","Reactome:R-HSA-265296","Reactome:R-HSA-9020255","Reactome:R-HSA-9027624","Reactome:R-HSA-266051"],"synonyms":[{"name":"5-delta-lipoxygenase activity","type":"related"},{"name":"5-lipoxygenase activity","type":"related"},{"name":"5Delta-lipoxygenase activity","type":"related"},{"name":"C-5-lipoxygenase activity","type":"related"},{"name":"LTA synthase activity","type":"narrow"},{"name":"arachidonate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"arachidonic 5-lipoxygenase activity","type":"related"},{"name":"arachidonic acid 5-lipoxygenase activity","type":"related"},{"name":"delta(5)-lipoxygenase activity","type":"related"},{"name":"delta5-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"},{"name":"leukotriene-A(4) synthase activity","type":"narrow"},{"name":"leukotriene-A4 synthase activity","type":"related"}],"termid":"GO:0004051"}


id: PR:Q9UTM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1420.01c gene.","definition_xrefs":["UniProtKB:Q9UTM5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1420.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.01c","synonyms":[{"name":"Spom972h-SPAC1420.01c","type":"exact"}],"termid":"PR:Q9UTM5"}


id: PBO:0050948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 22, pseudogene","termid":"PBO:0050948"}


id: PBO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug22","termid":"PBO:0000739"}


id: PBO:0012306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper binding protein of the mitochondrial inner membrane Cmc2 (predicted)","termid":"PBO:0012306"}


id: PBO:0073146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 interacting protein","termid":"PBO:0073146"}


id: GO:0018741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary linear alkyl sulfate ester + H2O =>a primary alcohol + H(+) + sulfate.","definition_xrefs":["UM-BBD_reactionID:r0602","RHEA:67908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"linear primary-alkylsulfatase activity","secondary_identifiers":["EC:3.1.6.21"],"synonyms":[{"name":"alkyl sulfatase activity","type":"broad"}],"termid":"GO:0018741"}


id: PBO:0039780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 5","termid":"PBO:0039780"}


id: GO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 3 activity (obsolete GO:0004249)","synonyms":[{"name":"MMP-11","type":"exact"},{"name":"matrix metalloproteinase 11","type":"exact"},{"name":"stromelysin 3 activity","type":"exact"}],"termid":"GO:0004249"}


id: GO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"},{"relation_name":"negatively_regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044085"],"is_obsolete":false,"name":"negative regulation of sphingolipid biosynthetic process","secondary_identifiers":["GO:0090157"],"synonyms":[{"name":"negative regulation of sphingolipid biosynthesis involved in cellular sphingolipid homeostasis","type":"related"}],"termid":"GO:0090155"}


id: PBO:0066788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 87","termid":"PBO:0066788"}


id: GO:0072103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the glomerulus vasculature are generated and organized. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"kidney vasculature morphogenesis","termid":"GO:0061439"},{"relation_name":"part_of","term_name":"glomerulus vasculature development","termid":"GO:0072012"},{"relation_name":"part_of","term_name":"glomerulus morphogenesis","termid":"GO:0072102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"}


id: PBO:0042026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 85A","termid":"PBO:0042026"}


id: PBO:0045341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 1","termid":"PBO:0045341"}


id: FYPO:0009021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-cysteine as the nitrogen source.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on cysteine nitrogen source","synonyms":[{"name":"decreased growth on cysteine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on cysteine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with cysteine nitrogen source","type":"related"},{"name":"reduced cell growth on cysteine nitrogen source","type":"related"},{"name":"slow cell growth on cysteine nitrogen source","type":"narrow"}],"termid":"FYPO:0009021"}


id: FYPO:0003460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"decreased cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during oxidative stress response","type":"exact"},{"name":"decreased cellular trehalose level during vegetative growth and during cellular response to oxidative stress","type":"exact"},{"name":"decreased cellular trehalose level in response to oxidative stress","type":"exact"},{"name":"decreased trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"reduced cellular trehalose level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003460"}


id: PBO:0053636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 682","termid":"PBO:0053636"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: GO:0120105
data:
  {"annotated_genes":["SJAG_03625","SJAG_03145","SJAG_02831","SJAG_00807","SJAG_04597","SJAG_03379","SJAG_02392","SJAG_03564","SJAG_03704","SJAG_00268","SJAG_01889","SJAG_00082","SJAG_01787","SJAG_00845","SJAG_03703","SJAG_02278","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84050,85706,86469,90028,90544,91443,91903,92783,96454,99181,101639,104455,106157,107632,108675,113088,113105],"is_not":false,"summary":null,"term":"GO:0120105"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring in between the proximal layer and the actin filament layer. This region contains the accessory protein network, some actin filaments and connections between the proximal layer and the actin filament layer.","definition_xrefs":["GOC:krc","GOC:vw","PMID:28914606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00268":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02278":null,"SJAG_02392":null,"SJAG_02831":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015629","GO:0005938","GO:0070938"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, intermediate layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, intermediate layer","type":"exact"}],"termid":"GO:0120105","terms_by_termid":{"GO:0120105":null}}


id: PBO:0041254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 185","termid":"PBO:0041254"}


id: GO:0038128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB2 on the surface of a cell. The pathway ends with regulation of a downstream cellular process, e.g. transcription. ERBB2 receptors are themselves unable to bind to ligands, but act as a signal-amplifying tyrosine kinase within a heterodimeric pair.","definition_xrefs":["GOC:jc","PMID:16460914","Reactome:R-HSA-1227986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB2 signaling pathway","synonyms":[{"name":"ERBB2 signalling pathway","type":"exact"},{"name":"HER2 signaling pathway","type":"exact"},{"name":"NEU signaling","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-2 signaling pathway","type":"exact"}],"termid":"GO:0038128"}


id: GO:2000804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000804"}


id: PBO:0059751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 25","termid":"PBO:0059751"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: GO:0061124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis to cAMP","termid":"GO:0061122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061124"}


id: PBO:0089823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase Hen1","termid":"PBO:0089823"}


id: PBO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member M, pseudogene","termid":"PBO:0046988"}


id: PBO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase B","termid":"PBO:0051702"}


id: PBO:0017678
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer's disease","termid":"PBO:0017678"}


id: GO:0045337
data:
  {"annotated_genes":["SJAG_04568","SJAG_03715","SJAG_04499","SJAG_00580","SJAG_01474","SJAG_03352","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70839,77437,97380],"is_not":false,"summary":null,"term":"GO:0045337"},{"annotations":[78528,73878,109063,110193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of farnesyl diphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"farnesyl diphosphate metabolic process","termid":"GO:0045338"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5123"],"synonyms":[{"name":"farnesyl diphosphate anabolism","type":"exact"},{"name":"farnesyl diphosphate biosynthesis","type":"exact"},{"name":"farnesyl diphosphate formation","type":"exact"},{"name":"farnesyl diphosphate synthesis","type":"exact"}],"termid":"GO:0045337","terms_by_termid":{"GO:0010142":null,"GO:0045337":null}}


id: PBO:0089478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon subunit Sec61 homolog","termid":"PBO:0089478"}


id: PBO:0049943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 1","termid":"PBO:0049943"}


id: PBO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae PMP3","termid":"PBO:0016995"}


id: PBO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase like 1","termid":"PBO:0051709"}


id: PBO:0057781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2861","termid":"PBO:0057781"}


id: GO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to limited nutrients in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to starvation","termid":"GO:0060275"}


id: GO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor activity","termid":"GO:0001614"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"P2Y","type":"related"},{"name":"P2Y receptor","type":"related"},{"name":"purinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"purinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0045028"}


id: GO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BMP receptor.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BMP receptor binding","synonyms":[{"name":"bone morphogenetic protein receptor binding","type":"exact"}],"termid":"GO:0070700"}


id: PBO:0091288
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific splicing","termid":"PBO:0091288"}


id: RO:HOM0000036
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves two members of a larger set of homologs.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_many_to_many_homology_relationship_with","synonyms":[{"name":"many to many homologous to","type":"exact"},{"name":"many-to-many homology","type":"exact"},{"name":"many:many homology ","type":"exact"}],"termid":"RO:HOM0000036"}


id: FYPO:0002098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein phosphorylation during cellular response to HU","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to HU","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002098"}


id: GO:0016237
data:
  {"annotated_genes":["SJAG_01722","SJAG_00355","SJAG_02100","SJAG_01135","SJAG_04232","SJAG_03851","SJAG_06309","SJAG_04655","SJAG_01283","SJAG_00059","SJAG_01382","SJAG_01080","SJAG_03100","SJAG_04502","SJAG_05017","SJAG_00645","SJAG_03718","SJAG_01274"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77409],"is_not":false,"summary":null,"term":"GO:0016237"},{"annotations":[72343,75904,72315,72675,95226,78358,71914,70413,73082,72774,78223,100288,76043,71306,72977,73840,72165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"A type of autophagy where cytosolic components are ingested by late endosomes, lysosomes or yeast-type lytic vacuoles by direct invagination of the compartment membrane without prior sequestration into an autophagosome. The engulfing membranes fuse, resulting in the lysosomal delivery of the cargo wrapped in a single membrane derived from the invaginated lysosomal membrane.","definition_xrefs":["PMID:14679207","PMID:16973210","PMID:15798367","PMID:9566964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01080":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"microautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"lysosomal microautophagy","type":"broad"}],"termid":"GO:0016237","terms_by_termid":{"GO:0016237":null,"GO:0034727":null}}


id: GO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"epiboly involved in wound healing","termid":"GO:0090505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of cells","synonyms":[{"name":"cell migration involved in wound healing epiboly","type":"exact"}],"termid":"GO:0044319"}


id: GO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Peyer's patch is generated and organized. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"Peyer's patch development","termid":"GO:0048541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch morphogenesis","termid":"GO:0061146"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_00342","SJAG_04705","SJAG_03622","SJAG_00297","SJAG_03573","SJAG_00904","SJAG_03590","SJAG_01952","SJAG_05341","SJAG_01403","SJAG_00909","SJAG_01771","SJAG_02391","SJAG_02494","SJAG_04099","SJAG_04820","SJAG_00150","SJAG_02551","SJAG_03061","SJAG_04647","SJAG_02849","SJAG_05203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83246,85437,86083,86387,89962,90072,90986,91463,94234,94582,97460,98896,99163,101483,101674,101809,104125,104153,104432,110020,110572,114102],"is_not":false,"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:tb","GOC:txnOH","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0060261":null}}


id: PBO:0083464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MET4/YNL104C","termid":"PBO:0083464"}


id: PBO:0028417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiosis_I","termid":"PBO:0028417"}


id: GO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amphetamine","termid":"GO:0001975"}


id: GO:1901798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signal transduction by p53 class mediator","synonyms":[{"name":"activation of signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:1901798"}


id: PR:O14057
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.03c","secondary_identifiers":["UniProtKB:O14057"],"synonyms":[{"name":"GAH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Guanase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GDA","type":"exact"},{"name":"guanine aminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"guanine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14057"}


id: PBO:0054994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2409","termid":"PBO:0054994"}


id: GO:1900998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitrobenzene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00923","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrobenzene metabolic process","termid":"GO:0018916"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"nitrobenzene catabolic process","synonyms":[{"name":"nitrobenzene breakdown","type":"exact"},{"name":"nitrobenzene catabolism","type":"exact"},{"name":"nitrobenzene degradation","type":"exact"}],"termid":"GO:1900998"}


id: GO:1902082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:8349590","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"positively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"activation of calcium ion import into sarcoplasmic reticulum","type":"narrow"},{"name":"up regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"up-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"upregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"}],"termid":"GO:1902082"}


id: PBO:0083819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER; other members are Sec62p, Sec66p, and Sec72p","termid":"PBO:0083819"}


id: PBO:0065788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1 pseudogene 1","termid":"PBO:0065788"}


id: PBO:0054901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2315","termid":"PBO:0054901"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: GO:0031799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 metabotropic glutamate receptor binding","synonyms":[{"name":"type 2 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031799"}


id: PBO:0052812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 78","termid":"PBO:0052812"}


id: PBO:0070828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 7","termid":"PBO:0070828"}


id: PBO:0064285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O2","termid":"PBO:0064285"}


id: PBO:0004835
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.6","termid":"PBO:0004835"}


id: PR:O13999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug155 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 155 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.04c","synonyms":[{"name":"Spom972h-mug155","type":"exact"}],"termid":"PR:O13999"}


id: PBO:0034754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome co-factor Txc1","termid":"PBO:0034754"}


id: GO:0072095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"branch elongation involved in ureteric bud branching","termid":"GO:0060681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branch elongation involved in ureteric bud branching","termid":"GO:0072095"}


id: SO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the structure of the gene is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:gene_variant","type":"exact"},{"name":"VAAST:gene_variant","type":"exact"},{"name":"gene structure variant","type":"exact"},{"name":"snpEff:GENE","type":"exact"}],"termid":"SO:0001564"}


id: PBO:0056354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 3","termid":"PBO:0056354"}


id: PBO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof14","termid":"PBO:0001437"}


id: GO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thyrotropin releasing hormone and secretagogue-like receptors activity (obsolete GO:0001615)","synonyms":[{"name":"thyrotropin releasing hormone and secretagogue-like receptors activity","type":"exact"}],"termid":"GO:0001615"}


id: PBO:0054558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1960","termid":"PBO:0054558"}


id: PBO:0045311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMT3L antisense RNA 1","termid":"PBO:0045311"}


id: PBO:0059685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 51","termid":"PBO:0059685"}


id: GO:0022403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell cycle phase","termid":"GO:0022403"}


id: PBO:0057253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 454","termid":"PBO:0057253"}


id: PBO:0054241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1623","termid":"PBO:0054241"}


id: GO:0004739
data:
  {"annotated_genes":["SJAG_02006","SJAG_03064"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72468,77802],"is_not":false,"summary":null,"term":"GO:0004739"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2.","definition_xrefs":["EC:1.2.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase activity","termid":"GO:0004738"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02006":null,"SJAG_03064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyruvate dehydrogenase (acetyl-transferring) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-1134","RHEA:19189"],"synonyms":[{"name":"MtPDC (mitochondrial pyruvate dehydogenase complex) activity","type":"narrow"},{"name":"PDH","type":"related"},{"name":"pyruvate dehydrogenase (lipoamide) activity","type":"exact"},{"name":"pyruvate dehydrogenase complex activity","type":"related"},{"name":"pyruvate:dihydrolipoyllysine-residue acetyltransferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-acetylating)","type":"related"},{"name":"pyruvate:lipoamide 2-oxidoreductase (decarboxylating and acceptor-acetylating) activity","type":"related"}],"termid":"GO:0004739","terms_by_termid":{"GO:0004739":null}}


id: GO:0046277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"methylgallate metabolic process","termid":"GO:0019489"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylgallate biosynthetic process","synonyms":[{"name":"methylgallate anabolism","type":"exact"},{"name":"methylgallate biosynthesis","type":"exact"},{"name":"methylgallate formation","type":"exact"},{"name":"methylgallate synthesis","type":"exact"}],"termid":"GO:0046277"}


id: PBO:0065736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxidasin like","termid":"PBO:0065736"}


id: PBO:0051010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 1","termid":"PBO:0051010"}


id: GO:0044374
data:
  {"annotated_genes":["SJAG_05153","SJAG_04009","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[102483,104212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to DNA in a sequence-specific manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding, bending","termid":"GO:0008301"},{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04009":null,"SJAG_04855":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sequence-specific DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA bending involving sequence-specific DNA binding","type":"exact"}],"termid":"GO:0044374","terms_by_termid":{"GO:0044377":null,"GO:0110035":null}}


id: GO:0098506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 3' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 3' dephosphorylation","termid":"GO:0098506"}


id: PBO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn5","termid":"PBO:0001871"}


id: PBO:0079991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 29","termid":"PBO:0079991"}


id: PBO:0056060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LURAP1L antisense RNA 1","termid":"PBO:0056060"}


id: SO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTTRTTTACA, bound by transcription factors with a forkhead DNA-binding domain.","definition_xrefs":["PMID:15195092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead_motif","synonyms":[{"name":"forkhead motif","type":"exact"}],"termid":"SO:0001847"}


id: PBO:0081996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 29","termid":"PBO:0081996"}


id: PBO:0049530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 1","termid":"PBO:0049530"}


id: PBO:0066666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR family member 3","termid":"PBO:0066666"}


id: PBO:0059422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome recycling factor pseudogene 1","termid":"PBO:0059422"}


id: PBO:0077881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polymerization promoting protein","termid":"PBO:0077881"}


id: GO:0100045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates arginine catabolic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter (obsolete GO:0100045)","termid":"GO:0100045"}


id: PATO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is in the parasagittal plane.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasagittal orientation","termid":"PATO:0005023"}


id: PBO:0078627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 77","termid":"PBO:0078627"}


id: PBO:0031483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_pigment_accumulation_phenotype","termid":"PBO:0031483"}


id: PBO:0055154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2573","termid":"PBO:0055154"}


id: GO:0099162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurotransmitter loading into synaptic vesicles.","definition_xrefs":["PMID:25176177","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"},{"relation_name":"regulates","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter loading into synaptic vesicle","synonyms":[{"name":"regulation of neurotransmitter uptake into synaptic vesicle","type":"exact"},{"name":"regulation of synaptic vesicle neurotransmitter loading","type":"exact"}],"termid":"GO:0099162"}


id: PBO:0005864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 4","termid":"PBO:0005864"}


id: PBO:0063622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase, platelet","termid":"PBO:0063622"}


id: GO:0061242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a mesonephric nephron tubule over time, from its initial formation to the mature structure. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule development","termid":"GO:0061242"}


id: RO:HOM0000002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that results from independent evolution.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homoplasy_relationship_with","synonyms":[{"name":"analogy","type":"related"},{"name":"homoplasous to","type":"exact"}],"termid":"RO:HOM0000002"}


id: PBO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1 (predicted)","termid":"PBO:0002223"}


id: GO:1990555
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84187],"is_not":false,"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The process in which oxaloacetate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate(2-) transmembrane transport","termid":"GO:1902356"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial oxaloacetate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990555","terms_by_termid":{"GO:1990555":null}}


id: PBO:0077037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 5","termid":"PBO:0077037"}


id: GO:0140394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of azoles, heterocyclic compound found in many biologically important substances, from one side of a membrane to the other according to the reaction: ATP + H2O + azole(in) = ADP + phosphate + azole(out).","definition_xrefs":["RHEA:33503","PMID:31501141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type azole transporter activity","synonyms":[{"name":"ATPase-coupled azole transmembrane transporter activity","type":"related"},{"name":"azole ABC transporter activity","type":"exact"}],"termid":"GO:0140394"}


id: PATO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitate","termid":"PATO:0001980"}


id: PBO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 2","termid":"PBO:0050976"}


id: FYPO:0002366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methylation during vegetative growth","termid":"FYPO:0000870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4me during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 methylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002366"}


id: PBO:0071937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 14","termid":"PBO:0071937"}


id: GO:0000978
data:
  {"annotated_genes":["SJAG_03911","SJAG_01930","SJAG_03346","SJAG_00979","SJAG_06576","SJAG_02149","SJAG_02730","SJAG_02956","SJAG_04191","SJAG_02406","SJAG_04388","SJAG_00987","SJAG_04092","SJAG_04813","SJAG_03622","SJAG_04036","SJAG_00304","SJAG_02218","SJAG_01243","SJAG_04749","SJAG_00266","SJAG_01343","SJAG_03388","SJAG_02052","SJAG_03918","SJAG_03538","SJAG_02138","SJAG_00037","SJAG_00124","SJAG_01725","SJAG_00210","SJAG_01583","SJAG_02709","SJAG_05343","SJAG_02311","SJAG_02938","SJAG_04584","SJAG_01694","SJAG_00163","SJAG_00802","SJAG_04855","SJAG_01532","SJAG_03519","SJAG_05006","SJAG_01307","SJAG_00698","SJAG_00693","SJAG_02472","SJAG_04839","SJAG_02252","SJAG_03473","SJAG_02326","SJAG_03241","SJAG_03143","SJAG_03484","SJAG_00926","SJAG_02569","SJAG_04421","SJAG_05153","SJAG_00386","SJAG_03735","SJAG_00664","SJAG_03183","SJAG_04009","SJAG_04712","SJAG_02810","SJAG_05288","SJAG_05247","SJAG_05337","SJAG_02048","SJAG_00792","SJAG_06599","SJAG_01441","SJAG_03879","SJAG_04249","SJAG_01740"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70084,71694,71971,72446,72720,73028,73278,73336,73532,73718,74399,75034,75123,75565,76589,76953,77238,77254,77945,78168,78446,78539,78630,78919,83816,84177,84232,84790,85203,85819,87582,88117,88930,89704,90340,90357,91643,92166,92514,92643,92956,93105,93106,93107,93108,93109,93683,93991,95038,95334,95647,97009,97547,97778,98187,99038,99931,101552,101692,103005,104044,104584,106224,106240,106256,106412,107227,107268,108726,109004,110126,111733,111866,113542],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[102483,104212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","termid":"GO:0000977"},{"relation_name":"is_a","term_name":"cis-regulatory region sequence-specific DNA binding","termid":"GO:0000987"}],"gene_count":76,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000980"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding","type":"related"}],"termid":"GO:0000978","terms_by_termid":{"GO:0000978":null,"GO:0044377":null}}


id: PBO:0047803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J3","termid":"PBO:0047803"}


id: FYPO:0002350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal stress granule assembly during vegetative growth","synonyms":[{"name":"normal cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during mitotic cell cycle","type":"related"},{"name":"normal stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002350"}


id: PBO:0067990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 292","termid":"PBO:0067990"}


id: FYPO:0007954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:mlr","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}


id: PBO:0082816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal protein with similarity to zinc carboxypeptidases; in some strains required for normal cell wall assembly","termid":"PBO:0082816"}


id: PBO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.13.-","termid":"PBO:0004706"}


id: PBO:0053565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 578","termid":"PBO:0053565"}


id: PBO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp1","termid":"PBO:0004136"}


id: GO:0036473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to an oxidative stress stimulus.","definition_xrefs":["GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to oxidative stress (obsolete GO:0036473)","termid":"GO:0036473"}


id: GO:0030317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a cilium (aka flagellum) that contributes to the movement of a flagellated sperm.","definition_xrefs":["PMID:26680031","GO_REF:0000060","GOC:cilia","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium-dependent cell motility","termid":"GO:0060285"},{"relation_name":"is_a","term_name":"cilium movement involved in cell motility","termid":"GO:0060294"},{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellated sperm motility","secondary_identifiers":["GO:0097724","GO:1905419","Wikipedia:Sperm_motility"],"synonyms":[{"name":"flagellated sperm movement","type":"exact"},{"name":"sperm flagellum movement","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm motility","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm movement","type":"exact"},{"name":"sperm motility","type":"broad"},{"name":"sperm movement","type":"broad"}],"termid":"GO:0030317"}


id: FYPO:0006379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to endoplasmic reticulum during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to ER during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum during nitrogen deprivation","type":"exact"},{"name":"protein localization to endoplasmic reticulum abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006379"}


id: GO:0047537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexanoate + 2-oxoglutarate = 2-oxohexanoate + L-glutamate.","definition_xrefs":["EC:2.6.1.67","MetaCyc:2-AMINOHEXANOATE-AMINOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"2-aminohexanoate transaminase activity","secondary_identifiers":["RHEA:23600"],"synonyms":[{"name":"2-aminohexanoate aminotransferase activity","type":"exact"},{"name":"L-2-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"leucine L-norleucine: 2-oxoglutarate aminotransferase activity","type":"related"},{"name":"norleucine (leucine) aminotransferase activity","type":"related"},{"name":"norleucine aminotransferase activity","type":"related"},{"name":"norleucine transaminase activity","type":"related"}],"termid":"GO:0047537"}


id: PBO:0070088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 2 pseudogene","termid":"PBO:0070088"}


id: GO:0006538
data:
  {"annotated_genes":["SJAG_00674","SJAG_03434","SJAG_01019","SJAG_00937","SJAG_03293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78185,113577],"is_not":false,"summary":null,"term":"GO:0006538"},{"annotations":[84195,87375,83235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_03293":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019459"],"synonyms":[{"name":"glutamate breakdown","type":"exact"},{"name":"glutamate catabolism","type":"exact"},{"name":"glutamate deamidation","type":"related"},{"name":"glutamate degradation","type":"exact"},{"name":"glutamic acid catabolic process","type":"exact"},{"name":"glutamic acid catabolism","type":"exact"}],"termid":"GO:0006538","terms_by_termid":{"GO:0006538":null,"GO:0006540":null}}


id: PR:O74770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC24C6.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.09c","synonyms":[{"name":"Spom972h-SPBC24C6.09c","type":"exact"}],"termid":"PR:O74770"}


id: PBO:0067794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 96","termid":"PBO:0067794"}


id: GO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"rhythmic synaptic transmission","termid":"GO:0060024"}


id: GO:0032053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum).","definition_xrefs":["GOC:jl","PMID:9889124","GOC:cilia","GOC:dph","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"ciliary basal body organization","synonyms":[{"name":"microtubule basal body organisation","type":"broad"},{"name":"microtubule basal body organization","type":"broad"},{"name":"microtubule basal body organization and biogenesis","type":"related"}],"termid":"GO:0032053"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: PBO:0076477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 2, ATP binding cassette subfamily B member","termid":"PBO:0076477"}


id: PR:O94293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.08","synonyms":[{"name":"Spom972h-SPBC887.08","type":"exact"}],"termid":"PR:O94293"}


id: FYPO:0005713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cytokinesis checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the cytokinesis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle.","definition_xrefs":["PomBase:mah","GO:0044878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis checkpoint","termid":"FYPO:0003830"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytokinesis checkpoint","synonyms":[{"name":"abolished cytokinesis checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished cytokinesis checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cytokinesis checkpoint","type":"exact"}],"termid":"FYPO:0005713"}


id: GO:0005371
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71423],"is_not":false,"summary":null,"term":"GO:0005371"},{"annotations":[72296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tricarboxylate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0005370"],"synonyms":[{"name":"tricarboxylate carrier activity","type":"exact"}],"termid":"GO:0005371","terms_by_termid":{"GO:0005371":null,"GO:0071913":null}}


id: PBO:0030202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multiseptate_vegetative_cell","termid":"PBO:0030202"}


id: GO:0050631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 2 NADPH + palmatine = S-adenosyl-L-homocysteine + corydaline + 2 NADP+.","definition_xrefs":["RHEA:14773","EC:2.1.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"corydaline synthase activity","secondary_identifiers":["KEGG_REACTION:R07241","MetaCyc:2.1.1.147-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:protoberberine 13-C-methyltransferase activity","type":"related"}],"termid":"GO:0050631"}


id: GO:0046327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"glycerol biosynthetic process","termid":"GO:0006114"},{"relation_name":"part_of","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol biosynthetic process from pyruvate","synonyms":[{"name":"glycerol anabolism from pyruvate","type":"exact"},{"name":"glycerol formation from pyruvate","type":"exact"},{"name":"glycerol synthesis from pyruvate","type":"exact"},{"name":"glyceroneogenesis","type":"exact"}],"termid":"GO:0046327"}


id: PBO:0054783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2196","termid":"PBO:0054783"}


id: RO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an arterial structure and another structure, where the arterial structure acts as a conduit channeling fluid, substance or energy.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supplies","termid":"RO:0002178"}


id: PR:O94399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- twf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.06","synonyms":[{"name":"Spom972h-twf1","type":"exact"}],"termid":"PR:O94399"}


id: GO:1901268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephalosporin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cephalosporin biosynthetic process","termid":"GO:0043646"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cephalosporin C biosynthetic process","synonyms":[{"name":"cephalosporin C anabolism","type":"exact"},{"name":"cephalosporin C biosynthesis","type":"exact"},{"name":"cephalosporin C formation","type":"exact"},{"name":"cephalosporin C synthesis","type":"exact"}],"termid":"GO:1901268"}


id: PBO:0049051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 50","termid":"PBO:0049051"}


id: PBO:0083251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by homology to a hemiascomycetous yeast protein","termid":"PBO:0083251"}


id: PBO:0086800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR285W is not an essential gene","termid":"PBO:0086800"}


id: PBO:0057737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1343","termid":"PBO:0057737"}


id: PBO:0054708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2117","termid":"PBO:0054708"}


id: MOD:00195
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-alanine residue and a glycine residue to form L-alanine 5-imidazolinone glycine.","definition_xrefs":["PubMed:10220322","RESID:AA0187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1-aminoethyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[1-aminoethyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"4-methylidene-imidazole-5-one active site","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Ala-Gly)","type":"exact"},{"name":"L-alanine 5-imidazolinone glycine","type":"exact"},{"name":"XLNK-1Ala-NGly(Imidazole)","type":"exact"},{"name":"alanyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00195"}


id: PBO:0012834
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens HRAS","termid":"PBO:0012834"}


id: MOD:01814
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a cysteine and two serine residues to form L-cysteine 3-hydroxy-2,5-pyridinedicarboxylic acid.","definition_xrefs":["PubMed:18406324","PubMed:893891","PubMed:19678698","RESID:AA0540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine 3-hydroxy-2,5-pyridinedicarboxylic acid","synonyms":[{"name":"6-[(1R)-1-amino-2-sulfanylethyl]-3-hydroxypyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"6-[1-azanyl-2-sulfanylethyl]-3-hydroxypyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"CROSSLNK 3-hydroxypyridine-2,5-dicarboxylic acid (Ser-Cys)","type":"related"},{"name":"L-cysteine 3-hydroxy-2,5-pyridinedicarboxylic acid","type":"exact"}],"termid":"MOD:01814"}


id: PR:Q9Y7Z5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 33 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04102","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetra-spanning protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.04","secondary_identifiers":["UniProtKB:Q9Y7Z5"],"synonyms":[{"name":"Spom972h-TMEM33","type":"exact"}],"termid":"PR:Q9Y7Z5"}


id: PBO:0050397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 2","termid":"PBO:0050397"}


id: PBO:0059763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 37","termid":"PBO:0059763"}


id: PBO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphoglycerate_mutase_activity","termid":"PBO:0030064"}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: PBO:0110305
data:
  {"annotation_feature_type":"gene","cv_name":"feature_pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_pub_source","termid":"PBO:0110305"}


id: PBO:0077511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM229B pseudogene 1","termid":"PBO:0077511"}


id: PBO:0028141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sulfide_absent_from_cell","termid":"PBO:0028141"}


id: PBO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOSLID antisense RNA 1","termid":"PBO:0060369"}


id: PBO:0060250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL antisense RNA 1","termid":"PBO:0060250"}


id: GO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NADPH + O2 = (24S)-24-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["EC:1.14.14.25","RHEA:22716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol 24-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07207","MetaCyc:1.14.13.98-RXN","Reactome:R-HSA-192061"],"synonyms":[{"name":"CYP46","type":"related"},{"name":"CYP46A1","type":"related"},{"name":"cholesterol 24-monooxygenase activity","type":"related"},{"name":"cholesterol 24S-hydroxylase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (24-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 46A1","type":"related"}],"termid":"GO:0033781"}


id: PBO:0055020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2435","termid":"PBO:0055020"}


id: GO:0050607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + mycothiol + NAD+ = S-formylmycothiol + NADH + H+.","definition_xrefs":["MetaCyc:1.2.1.66-RXN","EC:1.1.1.306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mycothiol-dependent formaldehyde dehydrogenase activity","secondary_identifiers":["RHEA:28502"],"synonyms":[{"name":"NAD/factor-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"formaldehyde:NAD+ oxidoreductase (mycothiol-formylating)","type":"exact"}],"termid":"GO:0050607"}


id: PBO:0070317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 6","termid":"PBO:0070317"}


id: FYPO:0001305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of any long-chain fatty acid-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"abnormal long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"abnormal lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001305"}


id: SO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region that is rich in a particular amino acid or homopolymeric and greater than three residues in length.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"compositionally_biased_region_of_peptide","secondary_identifiers":["BS:00068"],"synonyms":[{"name":"compbias","type":"related"},{"name":"compositional bias","type":"related"},{"name":"compositionally biased","type":"related"},{"name":"compositionally biased region of peptide","type":"related"},{"name":"compositionally_biased_region","type":"exact"}],"termid":"SO:0001066"}


id: GO:0120095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle membrane contact site formed at the junction of the vacuolar membrane and the isolation membrane or phagophore in response to starvation or other stresses, leading to the formation of the autophagosome.","definition_xrefs":["PMID:23549786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vacuole-isolation membrane contact site","synonyms":[{"name":"VICS","type":"related"},{"name":"vacuole-IM contact site","type":"exact"},{"name":"vacuole-phagophore contact site","type":"exact"}],"termid":"GO:0120095"}


id: FYPO:0004230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to UV","synonyms":[{"name":"normal protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to ultraviolet light","type":"related"}],"termid":"FYPO:0004230"}


id: PBO:0059399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 1","termid":"PBO:0059399"}


id: GO:1902216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["PMID:17210636","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"positively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"activation of IL-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902216"}


id: PBO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp1","termid":"PBO:0001564"}


id: GO:2000768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nephron tubule epithelial cell differentiation","termid":"GO:2000768"}


id: PBO:0083875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein that regulates pheromone-dependent morphogenesis; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain","termid":"PBO:0083875"}


id: GO:0070249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["ISBN:0781765196","GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"positively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell apoptotic process","synonyms":[{"name":"activation of natural killer cell apoptosis","type":"narrow"},{"name":"positive regulation of NK cell apoptosis","type":"exact"},{"name":"positive regulation of natural killer cell apoptosis","type":"narrow"},{"name":"stimulation of natural killer cell apoptosis","type":"narrow"},{"name":"up regulation of natural killer cell apoptosis","type":"exact"},{"name":"up-regulation of natural killer cell apoptosis","type":"exact"},{"name":"upregulation of natural killer cell apoptosis","type":"exact"}],"termid":"GO:0070249"}


id: PBO:0057287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 507","termid":"PBO:0057287"}


id: PBO:0027890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0027890"}


id: PBO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 10","termid":"PBO:0042956"}


id: PBO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 3","termid":"PBO:0050457"}


id: GO:0044864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where an infecting virus activates or increases the frequency, rate or extent of its host's cell division.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cell division","termid":"GO:0044863"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by virus of host cell division","termid":"GO:0044864"}


id: FYPO:0004300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATPase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal ATPase activity","termid":"FYPO:0004300"}


id: PBO:0074820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 18C","termid":"PBO:0074820"}


id: GO:1902535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A membrane invagination which involves another organism.","definition_xrefs":["GOC:TermGenie","GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane invagination (obsolete GO:1902535)","termid":"GO:1902535"}


id: PATO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during dark cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark phase","termid":"PATO:0000501"}


id: PBO:0068648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 29, pseudogene","termid":"PBO:0068648"}


id: GO:0120300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (L-lysyl-[protein] + lactoyl-CoA = CoA + H+ + N(6)-lactoyl-L-lysyl-[protein].","definition_xrefs":["GOC:sp","PMID:31645732","RHEA:61996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"peptide lactyltransferase activity","termid":"GO:0120300"}


id: FYPO:0001955
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[114383,114409,114372,114377],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null,"SJAG_04703":null},"genotype_count":5,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"spheroid cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_03453","SJAG_01794","SJAG_00514","SJAG_02819","SJAG_04703"],"single_locus_genotype_uniquenames":["scd1delta","scd2delta","ras1delta","efc25delta","for3delta"],"synonyms":[{"name":"cell morphology, round cells","type":"related"},{"name":"cell morphology, rounded cells","type":"related"},{"name":"rounded cell","type":"exact"}],"termid":"FYPO:0001955","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001956":null,"FYPO:0002380":null}}


id: PBO:0036059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0036059"}


id: PBO:0042266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 1","termid":"PBO:0042266"}


id: GO:1990355
data:
  {"annotated_genes":["SJAG_00419","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91167,95526],"is_not":false,"summary":null,"term":"GO:1990355"}]},"cv_name":"biological_process","definition":"The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00419":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"L-methionine salvage from methionine sulphoxide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355","terms_by_termid":{"GO:1990355":null}}


id: GO:0004471
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72836],"is_not":false,"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.","definition_xrefs":["EC:1.1.1.38","EC:1.1.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malic enzyme activity","termid":"GO:0004470"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"malate dehydrogenase (decarboxylating) (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00214","Reactome:R-HSA-9012268","RHEA:12653","MetaCyc:1.1.1.39-RXN","GO:0004472","GO:0016619"],"synonyms":[{"name":"'malic' enzyme","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"(S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating)","type":"related"},{"name":"NAD-linked malic enzyme","type":"related"},{"name":"NAD-malic enzyme activity","type":"broad"},{"name":"NAD-specific malic enzyme","type":"related"},{"name":"malate dehydrogenase (decarboxylating) activity","type":"related"},{"name":"malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"GO:0004471","terms_by_termid":{"GO:0004471":null}}


id: PBO:0059988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 8","termid":"PBO:0059988"}


id: GO:0021693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar Purkinje cell layer. This process pertains to the physical shaping of a rudimentary structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["ISBN:0838580343","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer structural organization","synonyms":[{"name":"cerebellar Purkinje cell layer structural organisation","type":"exact"}],"termid":"GO:0021693"}


id: GO:0015765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methylgalactoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methylgalactoside is a compound in which the H of the OH group on carbon-1 of galactose is replaced by a methyl group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"methylgalactoside transport","termid":"GO:0015765"}


id: PBO:0004089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Hba1","termid":"PBO:0004089"}


id: PBO:0110099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase-like protein, human ADCK5 ortholog, unknown role, possible chaperone for ubiquinone biosynthesis","termid":"PBO:0110099"}


id: PBO:0077351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 91","termid":"PBO:0077351"}


id: PBO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 1 like","termid":"PBO:0042975"}


id: PBO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase (predicted)","termid":"PBO:0000645"}


id: PBO:0076382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin precursor 4","termid":"PBO:0076382"}


id: PBO:0053291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain kinase 1","termid":"PBO:0053291"}


id: PBO:0108948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 5","termid":"PBO:0108948"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:hal","GO_REF:0000075","GOC:TermGenie","PMID:19762432","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: PBO:0085324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-phosphate 5-kinase; involved in actin cytoskeleton organization and cell morphogenesis; multicopy suppressor of stt4 mutation","termid":"PBO:0085324"}


id: GO:0032452
data:
  {"annotated_genes":["SJAG_01465","SJAG_03635","SJAG_02401","SJAG_03041","SJAG_03664","SJAG_03997","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83186,70476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[112973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[74291,70300,71739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[70472,112974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[89714,98713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a histone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylase activity","termid":"GO:0140457"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone demethylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4754181","Reactome:R-HSA-4754187","Reactome:R-HSA-4722133","Reactome:R-HSA-5661116","Reactome:R-HSA-4754176","Reactome:R-HSA-5625848","Reactome:R-HSA-5661114","Reactome:R-HSA-5661122","Reactome:R-HSA-3214912","Reactome:R-HSA-5661123","Reactome:R-HSA-5423117","Reactome:R-HSA-5661120","Reactome:R-HSA-5625797","Reactome:R-HSA-5661121","Reactome:R-HSA-5625870","Reactome:R-HSA-5661125","Reactome:R-HSA-5661124","Reactome:R-HSA-4724284","Reactome:R-HSA-5661115","Reactome:R-HSA-4724279"],"termid":"GO:0032452","terms_by_termid":{"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: PBO:0074350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomedin B domain containing 1, pseudogene","termid":"PBO:0074350"}


id: PBO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein","termid":"PBO:0001785"}


id: PBO:0069306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 562, pseudogene","termid":"PBO:0069306"}


id: PBO:0109301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization increases the mRNA concentration","termid":"PBO:0109301"}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: GO:0039706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a coreceptor. A coreceptor acts in cooperation with a primary receptor to transmit a signal within the cell.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"co-receptor binding","termid":"GO:0039706"}


id: PBO:0068440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 14, pseudogene","termid":"PBO:0068440"}


id: FYPO:0006458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: PBO:0052037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumping translocation breakpoint pseudogene 1","termid":"PBO:0052037"}


id: GO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chromoplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast envelope","termid":"GO:0031898"}


id: PBO:0017781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein protein Nod1","termid":"PBO:0017781"}


id: PBO:0005443
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.6","termid":"PBO:0005443"}


id: GO:0009182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009182"}


id: GO:0051305
data:
  {"annotated_genes":["SJAG_03540","SJAG_02624","SJAG_01805","SJAG_02814","SJAG_01297","SJAG_03683","SJAG_02761","SJAG_01613","SJAG_04076","SJAG_02336","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111190,90913,95906,113340,94773,104539,89435,97931,113843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[95908,103669,99384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"}]},"cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome migration to spindle pole","type":"exact"},{"name":"chromosome movement","type":"broad"},{"name":"chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0051305","terms_by_termid":{"GO:0007079":null,"GO:1990571":null}}


id: PBO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit SUMO ligase subunit Nse2","termid":"PBO:0034733"}


id: PBO:0067036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 50, pseudogene","termid":"PBO:0067036"}


id: MOD:00247
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-serine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:8183941","PubMed:8895467","RESID:AA0242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Ser-Cys)","type":"exact"},{"name":"L-serine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00247"}


id: GO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary alcohol + O2 = an aldehyde + H2O2.","definition_xrefs":["EC:1.1.3.13","MetaCyc:ALCOHOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alcohol oxidase activity","secondary_identifiers":["RHEA:19829"],"synonyms":[{"name":"AOX activity","type":"related"},{"name":"alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"ethanol oxidase activity","type":"related"}],"termid":"GO:0047639"}


id: GO:0045598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adipocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fat cell differentiation","synonyms":[{"name":"regulation of adipocyte cell differentiation","type":"exact"},{"name":"regulation of adipocyte differentiation","type":"exact"}],"termid":"GO:0045598"}


id: SO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene that arose via gene duplication. Generally duplicated pseudogenes have the same structure as the original gene, including intron-exon structure and some regulatory sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated_pseudogene","synonyms":[{"name":"duplicated pseudogene","type":"related"}],"termid":"SO:0001758"}


id: GO:0102144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxyspermidine + H2O + NADP = L-aspartic acid 4-semialdehyde betaine + 1,4-butanediammonium + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.5.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carboxyspermidine dehydrogenase II activity","secondary_identifiers":["RHEA:34111","MetaCyc:RXN-11566"],"termid":"GO:0102144"}


id: PBO:0052279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6A","termid":"PBO:0052279"}


id: PBO:0058497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5691","termid":"PBO:0058497"}


id: PBO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP58 divergent transcript","termid":"PBO:0042850"}


id: GO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-term memory","secondary_identifiers":["Wikipedia:Long-term_memory"],"termid":"GO:0007616"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: PBO:0062741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 8","termid":"PBO:0062741"}


id: PBO:0038457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis associated tyrosine kinase","termid":"PBO:0038457"}


id: PBO:0076960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3","termid":"PBO:0076960"}


id: GO:0070348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell proliferation","termid":"GO:0070345"},{"relation_name":"is_a","term_name":"regulation of brown fat cell proliferation","termid":"GO:0070347"},{"relation_name":"negatively_regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brown fat cell proliferation","synonyms":[{"name":"down regulation of brown fat cell proliferation","type":"exact"},{"name":"down-regulation of brown fat cell proliferation","type":"exact"},{"name":"downregulation of brown fat cell proliferation","type":"exact"},{"name":"inhibition of brown fat cell proliferation","type":"narrow"},{"name":"negative regulation of brown adipocyte proliferation","type":"exact"},{"name":"negative regulation of brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070348"}


id: PR:Q9UU76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio homology domain family member 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.11","synonyms":[{"name":"Spom972h-puf6","type":"exact"}],"termid":"PR:Q9UU76"}


id: PBO:0003898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, DUF1773 family","termid":"PBO:0003898"}


id: PBO:0073065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 3","termid":"PBO:0073065"}


id: PBO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase","termid":"PBO:0001482"}


id: GO:0008528
data:
  {"annotated_genes":["SJAG_01978","SJAG_01345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[83926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with a peptide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled peptide receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G protein coupled peptide receptor activity","type":"exact"},{"name":"G-protein coupled peptide receptor activity","type":"exact"},{"name":"peptide receptor activity, G protein coupled","type":"exact"},{"name":"peptide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008528","terms_by_termid":{"GO:0004932":null,"GO:0036320":null}}


id: PBO:0088318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein, tRNA chaperone Sla1","termid":"PBO:0088318"}


id: GO:0102412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = valerena-4,7(11)-diene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.139","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"valerena-4,7(11)-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-13769","RHEA:34467"],"termid":"GO:0102412"}


id: PR:G2TRK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC110.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C110.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.05","synonyms":[{"name":"Spom972h-SPAC110.05","type":"exact"}],"termid":"PR:G2TRK5"}


id: PBO:0030678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_shape","termid":"PBO:0030678"}


id: GO:0005319
data:
  {"annotated_genes":["SJAG_01329","SJAG_05209","SJAG_03172","SJAG_02943","SJAG_03741","SJAG_00587","SJAG_04984","SJAG_02323","SJAG_00669","SJAG_04370","SJAG_02375","SJAG_00018","SJAG_01731","SJAG_00589","SJAG_03746","SJAG_01722","SJAG_02516","SJAG_02957","SJAG_03416","SJAG_03338","SJAG_03718","SJAG_02114","SJAG_00230","SJAG_01470","SJAG_01229","SJAG_02132","SJAG_06440","SJAG_01945","SJAG_16459","SJAG_02897","SJAG_00576","SJAG_01305","SJAG_03050","SJAG_03710","SJAG_01590","SJAG_02581","SJAG_03721","SJAG_01095","SJAG_03100","SJAG_03851","SJAG_01225","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86248,86249,86246,97836,100528,86244,86250,86247,86245,86251,86252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[90050,93504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[95765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[104060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120013"},{"annotations":[95011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[96804,97716,70101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[93506,90052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[95717,90053,93507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[93128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[90054,95013,107830,93508,95718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[93129,75723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[95014,107832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[90055,95015,107833,93509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[72818,99073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[102950,84975,102178,99537,104915,86605,101288,103081,93065,94191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"},{"annotations":[104759,89871,106675,111494,98101,75987,103623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of lipids into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174786","Reactome:R-HSA-5683672","Reactome:R-HSA-1369028","Reactome:R-HSA-8848053","Reactome:R-HSA-5682311","Reactome:R-HSA-8866329","Reactome:R-HSA-5683714","Reactome:R-HSA-5682285","Reactome:R-HSA-5688397","Reactome:R-HSA-6801250","Reactome:R-HSA-1369052"],"synonyms":[{"name":"apolipoprotein","type":"related"},{"name":"lipophorin","type":"narrow"}],"termid":"GO:0005319","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120013":null,"GO:0120014":null,"GO:0120015":null,"GO:0120019":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: PBO:0063205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 1","termid":"PBO:0063205"}


id: PBO:0049166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: PATO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the middle of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medially rotated","synonyms":[{"name":"internally rotated","type":"exact"}],"termid":"PATO:0002155"}


id: GO:0140472
data:
  {"annotated_genes":["SJAG_03379","SJAG_03126","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96449,107286,113112],"is_not":false,"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"The region directly beneath the plasma membrane at the cell tip at which no growth takes place.","definition_xrefs":["PMID:17895368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex of cell tip","termid":"GO:0051285"},{"relation_name":"part_of","term_name":"non-growing cell tip","termid":"GO:0035839"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03126":null,"SJAG_03379":null,"SJAG_03705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cell cortex of non-growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140472","terms_by_termid":{"GO:0140472":null}}


id: PBO:0034703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein Cph2","termid":"PBO:0034703"}


id: PBO:0038811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 18","termid":"PBO:0038811"}


id: FYPO:0006926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is greater than normal (the ration observed in wild type is approximately 0.076-0.089).","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleus:cytoplasm ratio","synonyms":[{"name":"increased nuclear:cytoplasmic ratio","type":"exact"},{"name":"increased nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"increased nucleus:cell volume ratio","type":"exact"},{"name":"increased nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"increased nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"increased nucleus:cytoplasm volume ratio","type":"exact"}],"termid":"FYPO:0006926"}


id: SO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Rearranged genomic DNA of immunoglobulin/T-cell receptor gene including L-part1, V-intron and V-D-J-exon, with the 5'UTR (SO:0000204) and 3'UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDJ_gene_segment","synonyms":[{"name":"V-D-J-GENE","type":"exact"},{"name":"VDJ gene","type":"exact"}],"termid":"SO:0000574"}


id: FYPO:0007312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 at the central core of the centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere central core during vegetative growth","termid":"FYPO:0003415"},{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation during vegetative growth","termid":"FYPO:0005309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K5 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5 acetylation at centromeric central core during vegetative growth","type":"exact"},{"name":"increased histone H4K5 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007312"}


id: GO:0021645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vagus nerve morphogenesis","termid":"GO:0021644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve structural organization","synonyms":[{"name":"CN X structural organization","type":"related"},{"name":"vagus nerve structural organisation","type":"exact"}],"termid":"GO:0021645"}


id: GO:0051368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-threonine to form peptidyl-O3-octanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["RESID:AA0387","GOC:jsg","PMID:11546772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-threonine octanoylation","secondary_identifiers":["RESID:AA0386"],"termid":"GO:0051368"}


id: FYPO:0003598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is decreased.","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased snRNA 3'-end processing","synonyms":[{"name":"decreased snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"reduced snRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0003598"}


id: PBO:0056169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADCAM1 antisense RNA 1","termid":"PBO:0056169"}


id: GO:0034009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate = diphosphate + isoprene.","definition_xrefs":["EC:4.2.3.27","RHEA:13369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"isoprene synthase activity","secondary_identifiers":["KEGG_REACTION:R08199","MetaCyc:4.2.3.27-RXN"],"synonyms":[{"name":"ISPC","type":"related"},{"name":"ISPS","type":"related"},{"name":"dimethylallyl-diphosphate diphosphate-lyase (isoprene-forming) activity","type":"related"}],"termid":"GO:0034009"}


id: PBO:0057394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-2","termid":"PBO:0057394"}


id: PBO:0068330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 34","termid":"PBO:0068330"}


id: GO:0031463
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74271],"is_not":false,"summary":null,"term":"GO:0031463"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul3 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a BTB-domain-containing protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul3-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"BC3B complex","type":"exact"},{"name":"BCR3 complex","type":"exact"},{"name":"CDL3 complex","type":"exact"},{"name":"CRL3 complex","type":"exact"},{"name":"SCF3 complex","type":"related"},{"name":"cullin-RING ligase 3","type":"exact"}],"termid":"GO:0031463","terms_by_termid":{"GO:0031463":null}}


id: FYPO:0006377
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"abnormal protein localisation to endoplasmic reticulum","type":"exact"},{"name":"abnormal protein localization to ER","type":"exact"}],"termid":"FYPO:0006377","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0071552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a RIP homotypic interaction motif (RHIM) interaction.","definition_xrefs":["GOC:amm","PMID:11734559"],"gene_count":0,"genotype_count":0,"name":"obsolete RIP homotypic interaction motif-mediated complex assembly (obsolete GO:0071552)","synonyms":[{"name":"RHIM-mediated complex assembly","type":"exact"}],"termid":"GO:0071552"}


id: GO:0017184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthamide, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthamide catabolic process (obsolete GO:0017184)","synonyms":[{"name":"peptidyl-diphthamide breakdown","type":"exact"},{"name":"peptidyl-diphthamide catabolism","type":"exact"},{"name":"peptidyl-diphthamide degradation","type":"exact"}],"termid":"GO:0017184"}


id: PBO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 5","termid":"PBO:0003016"}


id: PBO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)/OR22-1 (pseudogene)","termid":"PBO:0051477"}


id: PBO:0050619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 11","termid":"PBO:0050619"}


id: PBO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp5","termid":"PBO:0036441"}


id: PBO:0061333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B11","termid":"PBO:0061333"}


id: FYPO:0006415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindles in adjacent dividing nuclei overlap during meiosis II.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"overlapping meiosis II spindles","synonyms":[{"name":"overlapping spindles at meiosis II","type":"exact"},{"name":"overlapping spindles during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006415"}


id: GO:1904603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:16503878","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of advanced glycation end-product receptor activity","synonyms":[{"name":"regulation of AGE receptor activity","type":"exact"},{"name":"regulation of RAGE activity","type":"exact"}],"termid":"GO:1904603"}


id: PBO:0066419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication initiator 1","termid":"PBO:0066419"}


id: GO:1903774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:24878737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral budding via host ESCRT complex","termid":"GO:1903772"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral budding via host ESCRT complex","synonyms":[{"name":"activation of viral budding through the ESCRT machinery","type":"related"},{"name":"activation of viral budding via host ESCRT complex","type":"narrow"},{"name":"positive regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"up-regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up-regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"upregulation of viral budding through the ESCRT machinery","type":"related"},{"name":"upregulation of viral budding via host ESCRT complex","type":"exact"}],"termid":"GO:1903774"}


id: PBO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase (predicted)","termid":"PBO:0000132"}


id: GO:2000149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in ventricular septum morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in ventricular septum morphogenesis","termid":"GO:0061348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis","termid":"GO:2000149"}


id: GO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a leukocyte between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation.","definition_xrefs":["PMID:7507411","ISBN:0781735149","PMID:8600538","PMID:14680625","PMID:14708592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diapedesis","termid":"GO:0050904"}


id: GO:0008014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A calcium-dependent cell adhesion protein (type I membrane protein) that interacts in a homophilic manner in cell-cell interactions.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent cell adhesion molecule activity (obsolete GO:0008014)","synonyms":[{"name":"cadherin","type":"narrow"},{"name":"calcium-dependent cell adhesion molecule activity","type":"exact"}],"termid":"GO:0008014"}


id: PBO:0038594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase long chain","termid":"PBO:0038594"}


id: PR:000027619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 phosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:Q10424-1, MOD:00696.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zip1/PhosRes+","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/PhosRes+","type":"exact"},{"name":"zip1/PhosRes+","type":"exact"}],"termid":"PR:000027619"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:17446882","ISBN:0471522295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: PBO:0087633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; identified by homology to Ashbya gossypii; EGO2 has a paralog, EGO4, that arose from the whole genome duplication","termid":"PBO:0087633"}


id: PBO:0085751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) in response to starvation; activated by uncharged tRNAs and the Gcn1p-Gcn20p complex; contributes to DNA damage checkpoint control","termid":"PBO:0085751"}


id: PBO:0053461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 421","termid":"PBO:0053461"}


id: GO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell proliferation involved in embryonic placenta development.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"}


id: GO:1904192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:24498161","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte apoptotic process","synonyms":[{"name":"regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904192"}


id: PBO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA","termid":"PBO:0002184"}


id: GO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"basement membrane assembly","termid":"GO:0070831"}


id: GO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the nephron acquire their identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"nephron tubule formation","termid":"GO:0072079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of nephron tubule identity","termid":"GO:0072081"}


id: GO:0008031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of eclosion hormone, a peptide hormone that, upon receptor binding, triggers the death of certain muscles and neurons during insect metamorphosis.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0098772","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"eclosion hormone activity","termid":"GO:0008031"}


id: PBO:0061347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 5","termid":"PBO:0061347"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: GO:0042996
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042996","terms_by_termid":{"GO:0042997":null}}


id: PBO:0013111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead domain","termid":"PBO:0013111"}


id: FYPO:0005453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal translocation that would result in the loss of one of two different alleles of a gene does not occur.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished break-induced loss of heterozygosity via chromosomal translocation","synonyms":[{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during mitotic cell cycle","type":"related"},{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during vegetative growth","type":"exact"},{"name":"break-induced loss of heterozygosity via chromosomal translocation abolished","type":"exact"}],"termid":"FYPO:0005453"}


id: GO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte in response to an external stimulus.","definition_xrefs":["GOC:add","PMID:11696603","PMID:15173832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte chemotaxis","termid":"GO:0002548"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: GO:0018774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dioxo-6-phenylhexa-3-enoate + H2O = benzoate + 2-oxopent-4-enoate.","definition_xrefs":["EC:3.7.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,6-dioxo-6-phenylhexa-3-enoate hydrolase activity","secondary_identifiers":["UM-BBD_enzymeID:e0033","MetaCyc:3.7.1.8-RXN","RHEA:17161"],"synonyms":[{"name":"2,6-dioxo-6-phenylhexa-3-enoate benzoylhydrolase activity","type":"related"},{"name":"2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase activity","type":"exact"},{"name":"HOHPDA hydrolase activity","type":"related"}],"termid":"GO:0018774"}


id: PBO:0048421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain containing 2A","termid":"PBO:0048421"}


id: PATO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to undergo sexual reproduction in order to differentiate the individuals or types involved.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological sex","termid":"PATO:0000047"}


id: FYPO:0002089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which exocytosis is abnormal. Exocytosis is the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. A phenotype may affect exocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0006887","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"},{"relation_name":"is_a","term_name":"abnormal exocytosis","termid":"FYPO:0007873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal exocytosis during vegetative growth","synonyms":[{"name":"abnormal exocytosis during mitotic cell cycle","type":"related"},{"name":"exocytosis defects during vegetative growth","type":"exact"}],"termid":"FYPO:0002089"}


id: PBO:0056184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor K","termid":"PBO:0056184"}


id: PBO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 7","termid":"PBO:0042953"}


id: PATO:0001475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased position","synonyms":[{"name":"high position","type":"related"}],"termid":"PATO:0001475"}


id: PBO:0080096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST antisense RNA 2","termid":"PBO:0080096"}


id: GO:0097744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of urate salt or uric acid from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["Wikipedia:Renal_physiology#Secretion","PMID:25287933","PMID:3906799","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal urate salt excretion","synonyms":[{"name":"urate excretion","type":"broad"},{"name":"urate salt excretion","type":"broad"}],"termid":"GO:0097744"}


id: GO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.","definition_xrefs":["EC:1.2.1.13","MetaCyc:1.2.1.13-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity","termid":"GO:0043891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity","secondary_identifiers":["RHEA:10296"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"NADP-dependent glyceraldehyde phosphate dehydrogenase activity","type":"related"},{"name":"NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"NADP-triose phosphate dehydrogenase activity","type":"related"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate) (phosphorylating)","type":"related"},{"name":"glyceraldehyde phosphate dehydrogenase (nicotinamide adenine dinucleotide phosphate) (phosphorylating)","type":"related"},{"name":"triosephosphate dehydrogenase (NADP(+)) activity","type":"related"},{"name":"triosephosphate dehydrogenase (NADP)","type":"related"},{"name":"triosephosphate dehydrogenase (NADP+) activity","type":"related"}],"termid":"GO:0047100"}


id: GO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete desmin (obsolete GO:0045100)","synonyms":[{"name":"desmin","type":"exact"}],"termid":"GO:0045100"}


id: PR:Q9P6N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.16c","synonyms":[{"name":"Spom972h-atg1802","type":"exact"},{"name":"meiotically up-regulated gene 179 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N1"}


id: GO:0007553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development, including the metamorphosis of immature forms and the development of the reproductive system and the maturation of oocytes in adult females.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of ecdysteroid metabolic process","synonyms":[{"name":"regulation of ecdysteroid metabolism","type":"exact"}],"termid":"GO:0007553"}


id: GO:0008444
data:
  {"annotated_genes":["SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71505],"is_not":false,"summary":null,"term":"GO:0008444"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + CDP-diacylglycerol = 3-(3-sn-phosphatidyl)-sn-glycerol 1-phosphate + CMP + H+.","definition_xrefs":["EC:2.7.8.5","RHEA:12593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00168":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01801","MetaCyc:PHOSPHAGLYPSYN-RXN","Reactome:R-HSA-1482939"],"synonyms":[{"name":"3-phosphatidyl-1'-glycerol-3'-phosphate synthase activity","type":"related"},{"name":"CDP-diacylglycerol:sn-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol-sn-glycerol-3-phosphate 3-phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol:glycerol-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"CDPdiacylglycerol:sn-glycero-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"PGP synthase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):sn-glycerol-3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerol phosphate phosphatidyltransferase activity","type":"related"},{"name":"glycerophosphate phosphatidyltransferase activity","type":"related"},{"name":"phosphatidylglycerol phosphate synthase activity","type":"related"},{"name":"phosphatidylglycerol phosphate synthetase activity","type":"related"},{"name":"phosphatidylglycerolphosphate synthase activity","type":"related"},{"name":"phosphatidylglycerophosphate synthase activity","type":"related"},{"name":"phosphatidylglycerophosphate synthetase activity","type":"related"},{"name":"sn-glycerol-3-phosphate phosphatidyltransferase activity","type":"related"}],"termid":"GO:0008444","terms_by_termid":{"GO:0008444":null}}


id: PBO:0061651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 22","termid":"PBO:0061651"}


id: GO:0033607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of superoxide dismutase 1 and Bcl-2. Complex formation is thought to link superoxide dismutase to an apoptotic pathway.","definition_xrefs":["PMID:16790527","PMID:15233914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SOD1-Bcl-2 complex","termid":"GO:0033607"}


id: PBO:0058704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6832","termid":"PBO:0058704"}


id: PATO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000816 relative odor acuity value (obsolete PATO:0000816)","termid":"PATO:0000816"}


id: PBO:0109089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 3","termid":"PBO:0109089"}


id: PBO:0082161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine kinase; required for the utilization of S-adenosylmethionine (AdoMet); may be involved in recycling adenosine produced through the methyl cycle","termid":"PBO:0082161"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_02163","SJAG_02102","SJAG_00554","SJAG_03774","SJAG_02903","SJAG_00747","SJAG_05219","SJAG_04770","SJAG_04821","SJAG_00394","SJAG_04952","SJAG_00924","SJAG_04954","SJAG_03764","SJAG_03056","SJAG_03311","SJAG_03656","SJAG_00437","SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95532,73897,71726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[102153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[93960,107885,95533,93908,100447,111990,83294,86814,71311,99050,104681,97793,74332,106434,95516,89532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006488"},{"annotations":[95534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0006488":null,"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: GO:0102547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2-O-(alpha-D-glucopyranosyl)-D-glycerate = alpha-D-glucose + D-glycerate.","definition_xrefs":["EC:3.3.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glucosylglycerate hydrolase activity","secondary_identifiers":["RHEA:32059","MetaCyc:RXN-14901"],"termid":"GO:0102547"}


id: GO:0015838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of betaine, the N-trimethyl derivative of an amino acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine transport","synonyms":[{"name":"betaine transport","type":"exact"}],"termid":"GO:0015838"}


id: PBO:0086521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps snR10, a snoRNA required for preRNA processing","termid":"PBO:0086521"}


id: GO:0140014
data:
  {"annotated_genes":["SJAG_02045","SJAG_00684","SJAG_03681","SJAG_04489","SJAG_01215","SJAG_03989","SJAG_04040","SJAG_04968","SJAG_05329","SJAG_02761","SJAG_04999","SJAG_01228","SJAG_02664","SJAG_02807","SJAG_04126","SJAG_00244","SJAG_03449","SJAG_03437","SJAG_07018","SJAG_05207","SJAG_04699","SJAG_05266","SJAG_01805","SJAG_02731","SJAG_01242","SJAG_04573","SJAG_00416","SJAG_05236","SJAG_04140","SJAG_01928","SJAG_04003","SJAG_02346","SJAG_03126","SJAG_01211","SJAG_03942","SJAG_00768","SJAG_04177","SJAG_00418","SJAG_00697","SJAG_03161","SJAG_00871","SJAG_00646","SJAG_01050","SJAG_03683","SJAG_00335","SJAG_04255","SJAG_04661","SJAG_01546","SJAG_01082","SJAG_04076","SJAG_02513","SJAG_02380","SJAG_01297","SJAG_01370","SJAG_03353","SJAG_04509","SJAG_01679","SJAG_01873","SJAG_03116","SJAG_05321","SJAG_03351","SJAG_02058","SJAG_04884","SJAG_03540","SJAG_02169","SJAG_04412","SJAG_00666","SJAG_00146","SJAG_03062","SJAG_05193","SJAG_03682","SJAG_04464","SJAG_02542","SJAG_03891","SJAG_00302","SJAG_03619","SJAG_00680","SJAG_01837","SJAG_03073","SJAG_02286","SJAG_01278","SJAG_03217","SJAG_03567","SJAG_01371","SJAG_04745","SJAG_03783","SJAG_04841","SJAG_00930","SJAG_04901","SJAG_00900","SJAG_00794","SJAG_01601","SJAG_00082","SJAG_01224","SJAG_00883","SJAG_04623","SJAG_02336","SJAG_01745","SJAG_02624","SJAG_00350","SJAG_04972","SJAG_04259","SJAG_00678","SJAG_03892","SJAG_02186","SJAG_03832","SJAG_03327","SJAG_05220","SJAG_03835","SJAG_00207","SJAG_01956","SJAG_01330","SJAG_01613","SJAG_04319","SJAG_03543","SJAG_01775","SJAG_01067","SJAG_05319","SJAG_00796","SJAG_03219","SJAG_00918","SJAG_02451","SJAG_02246","SJAG_03220","SJAG_00773","SJAG_03048","SJAG_05032","SJAG_02609","SJAG_03313","SJAG_02498","SJAG_04581","SJAG_02814","SJAG_04883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100917,111785,85764,113337,83786,74958,105720,86686,83549,113840,87060,93478,91162,95904,105678,71794,72529,107027],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[102656,103665,86428,109573,111166,107300,95115,109099,99382],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[76671,90911,74884],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[103666],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[73638,94776,92355,98536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[96953],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903562"},{"annotations":[90385,105287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[83788,107029],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990893"},{"annotations":[112927,93331,107391,87455,71808,101631,108704,111786,100100,70633],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007076"},{"annotations":[99384,103669,95908],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007079"},{"annotations":[94182,99385,103670,94780,89822],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[89474,96955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[83682,105293,93259,93924,105687,88688],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[114279,114471,114611],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[87020,91564,93531,114304,114305,96414,114306,101998,114307,98629],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[99386,109802,89469,84889,94184,105271,89823,102923,85103,99024,103671,96037,108551,86674,107944,112159,104283,107945,97932,113870,109102,85469,94680,107946,109404],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[100988,107524,108869,86479,101802,94819,112114,89923,71229,109441,107236,104604,91830,109863,90314,104540,111191],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000070"},{"annotations":[86063,87417,90770,96315,112797,95132,97339,92188],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051306"},{"annotations":[92456,105947,110334,104998,113845,96509],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090307"},{"annotations":[97302,101754,105288,109803,110814,94978],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[113846,102845,113344],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[90386,95910,99026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[103674,95380,95911,94185,96957,92867,99389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[94782,96958],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140641"},{"annotations":[92868,94783,90388,104253],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[89824],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[111928],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[106719,95659,89442,110062,97608,93271,97877],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[85722,97878,89443,106548,111931],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[106279],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0007088"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear division","termid":"GO:0000280"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":133,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00146":null,"SJAG_00207":null,"SJAG_00244":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00350":null,"SJAG_00416":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_00680":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00768":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00796":null,"SJAG_00871":null,"SJAG_00883":null,"SJAG_00900":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01050":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01242":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01679":null,"SJAG_01745":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_01928":null,"SJAG_01956":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02246":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02513":null,"SJAG_02542":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03126":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03219":null,"SJAG_03220":null,"SJAG_03313":null,"SJAG_03327":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03437":null,"SJAG_03449":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03567":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03682":null,"SJAG_03683":null,"SJAG_03783":null,"SJAG_03832":null,"SJAG_03835":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04003":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04319":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04573":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04883":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04968":null,"SJAG_04972":null,"SJAG_04999":null,"SJAG_05032":null,"SJAG_05193":null,"SJAG_05207":null,"SJAG_05220":null,"SJAG_05236":null,"SJAG_05266":null,"SJAG_05319":null,"SJAG_05321":null,"SJAG_05329":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"mitosis","type":"exact"}],"termid":"GO:0140014","terms_by_termid":{"GO:0000022":null,"GO:0000070":null,"GO:0000073":null,"GO:0007076":null,"GO:0007079":null,"GO:0007084":null,"GO:0007088":null,"GO:0007094":null,"GO:0045842":null,"GO:0051256":null,"GO:0051306":null,"GO:0051315":null,"GO:0061804":null,"GO:0061805":null,"GO:0090267":null,"GO:0090307":null,"GO:0099606":null,"GO:0099607":null,"GO:0101024":null,"GO:0101026":null,"GO:0140429":null,"GO:0140499":null,"GO:0140515":null,"GO:0140641":null,"GO:1902426":null,"GO:1903562":null,"GO:1990758":null,"GO:1990810":null,"GO:1990893":null,"GO:1990942":null}}


id: PBO:0027763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027763"}


id: PBO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase, spermatogenic","termid":"PBO:0048367"}


id: PBO:0083288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; null mutant displays shortened telomeres; partially overlaps the uncharacterized ORF YMR031C","termid":"PBO:0083288"}


id: PBO:0064060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 94","termid":"PBO:0064060"}


id: PBO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.2","termid":"PBO:0001678"}


id: PBO:0083349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene GOS1/YHL031C","termid":"PBO:0083349"}


id: PBO:0038629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACKR4 pseudogene 1","termid":"PBO:0038629"}


id: FYPO:0003440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during cytokinesis. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PMID:24798735","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during cytokinesis","synonyms":[{"name":"cell lysis during cytokinesis during mitotic cell cycle","type":"related"},{"name":"cell lysis during cytokinesis during vegetative growth","type":"exact"},{"name":"cytolysis during cytokinesis","type":"exact"},{"name":"inviable, lysed cell during cytokinesis","type":"exact"}],"termid":"FYPO:0003440"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: MOD:00604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2x(2)H labeled monomethylated L-lysine.","definition_xrefs":["Unimod:284","PubMed:15525938"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6-methyl-L-lysine","termid":"MOD:00085"},{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(2)H monomethylated L-lysine","synonyms":[{"name":"Deuterium Methylation of Lysine","type":"related"},{"name":"Methyl:2H(2)","type":"related"}],"termid":"MOD:00604"}


id: PBO:0076128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine/tyrosine interacting like 2","termid":"PBO:0076128"}


id: PBO:0057657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1249","termid":"PBO:0057657"}


id: GO:0034435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and cholesterol. In the blood this process is associated with the conversion of free cholesterol into cholesteryl ester, which is then sequestered into the core of a lipoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl","GOC:pde"],"gene_count":0,"genotype_count":0,"name":"obsolete cholesterol esterification (obsolete GO:0034435)","termid":"GO:0034435"}


id: PBO:0085581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 60S assembly and pre-40S AFs recycling; has sequence similarity to human MybBP1A and weak sequence similarity to B-type DNA polymerases; not required for chromosomal DNA replication","termid":"PBO:0085581"}


id: PBO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 66","termid":"PBO:0044291"}


id: FYPO:0000693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased DNA-1,N6-ethenoadenine N-glycosylase activity","synonyms":[{"name":"reduced DNA-1,N6-ethenoadenine N-glycosylase activity","type":"exact"}],"termid":"FYPO:0000693"}


id: GO:0032914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta1 production","termid":"GO:0032908"},{"relation_name":"is_a","term_name":"positive regulation of transforming growth factor beta production","termid":"GO:0071636"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta1 production","synonyms":[{"name":"activation of transforming growth factor-beta1 production","type":"narrow"},{"name":"positive regulation of TGF-B1 production","type":"exact"},{"name":"positive regulation of TGFB1 production","type":"exact"},{"name":"stimulation of transforming growth factor-beta1 production","type":"narrow"},{"name":"up regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"up-regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"upregulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032914"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:15928680","GOC:add","PMID:10375559","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: GO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from the minus end of a microtubule.","definition_xrefs":["GOC:sart","PMID:17452528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"minus-end specific microtubule depolymerization","termid":"GO:0036078"}


id: MOD:00662
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a methylated leucine, either N-methylleucine, or leucine methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:00662"}


id: GO:0016048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus","synonyms":[{"name":"detection of temperature","type":"exact"},{"name":"detection of thermal stimulus","type":"exact"},{"name":"perception of temperature","type":"related"}],"termid":"GO:0016048"}


id: PBO:0085882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in and induced by the endoplasmic reticulum unfolded protein response (UPR); SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0085882"}


id: PBO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036173"}


id: GO:0039675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus through the nuclear pore.","definition_xrefs":["PMID:12921991","VZ:1953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus through nuclear pore","synonyms":[{"name":"exit of virus from host cell nucleus through nuclear pore complex","type":"exact"},{"name":"nuclear pore exit of virus","type":"exact"},{"name":"viral enome export through nuclear pore","type":"exact"}],"termid":"GO:0039675"}


id: GO:0047804
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109256],"is_not":false,"summary":null,"term":"GO:0047804"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate.","definition_xrefs":["MetaCyc:CYSTEINE-S-CONJUGATE-BETA-LYASE-RXN","EC:4.4.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cysteine-S-conjugate beta-lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:18121","MetaCyc:RXN-6763"],"synonyms":[{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating) activity","type":"related"},{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"cysteine conjugate beta-lyase activity","type":"related"},{"name":"cysteine-S-conjugate b-lyase activity","type":"exact"},{"name":"glutamine transaminase K/cysteine conjugate beta-lyase activity","type":"related"}],"termid":"GO:0047804","terms_by_termid":{"GO:0047804":null}}


id: PBO:0077112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 21","termid":"PBO:0077112"}


id: GO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of rhombomere 5 are generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 5 development","termid":"GO:0021571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}


id: FYPO:0000562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished cellular respiration","synonyms":[{"name":"abolished cellular respiration during mitotic cell cycle","type":"related"},{"name":"absent respiratory metabolism","type":"exact"},{"name":"cellular respiration abolished","type":"exact"},{"name":"cellular respiration abolished during vegetative growth","type":"exact"},{"name":"respiration abolished","type":"broad"},{"name":"respiratory metabolism abolished","type":"exact"},{"name":"respiratory metabolism: absent","type":"related"}],"termid":"FYPO:0000562"}


id: GO:0036377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of mutualism between a fungus and the roots of a vascular plant, where hyphae of the fungus penetrate the plant cell wall and invaginate its cell membrane. Once inside, the fungus forms highly branched structures for nutrient exchange with the plant called arbuscules. Aids in the acquisition by the plant of nutrients such as phosphorus from the soil.","definition_xrefs":["Wikipedia:Arbuscular_mycorrhiza","GOC:sk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arbuscular mycorrhizal association","synonyms":[{"name":"arbuscular mycorrhizae formation","type":"exact"},{"name":"arbuscular mycorrhizal symbiosis","type":"related"},{"name":"arbuscular mycorrhizas formation","type":"exact"}],"termid":"GO:0036377"}


id: GO:0046347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine biosynthetic process","synonyms":[{"name":"mannosamine anabolism","type":"exact"},{"name":"mannosamine biosynthesis","type":"exact"},{"name":"mannosamine formation","type":"exact"},{"name":"mannosamine synthesis","type":"exact"}],"termid":"GO:0046347"}


id: PBO:0034507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_homologous_chromosome_biorientation_with_abnormal_kinetochore_orientation","termid":"PBO:0034507"}


id: PBO:0054831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2244","termid":"PBO:0054831"}


id: GO:1902137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-secoisolariciresinol.","definition_xrefs":["PMID:8910615","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"diol catabolic process","termid":"GO:0034313"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"(-)-secoisolariciresinol metabolic process","termid":"GO:1902136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"(-)-secoisolariciresinol catabolic process","synonyms":[{"name":"(-)-secoisolariciresinol breakdown","type":"exact"},{"name":"(-)-secoisolariciresinol catabolism","type":"exact"},{"name":"(-)-secoisolariciresinol degradation","type":"exact"}],"termid":"GO:1902137"}


id: GO:0033374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to secretory granule","termid":"GO:0033366"},{"relation_name":"part_of","term_name":"T cell secretory granule organization","termid":"GO:0033371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to T cell secretory granule","synonyms":[{"name":"protein localisation in T cell secretory granule","type":"exact"},{"name":"protein localization in T cell secretory granule","type":"exact"},{"name":"protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"protein localization in T-cell secretory granule","type":"exact"},{"name":"protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033374"}


id: PBO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A3, pseudogene","termid":"PBO:0046878"}


id: MOD:01170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a 2-ketoimine of pyruvicacid with a residue amino group.","definition_xrefs":["Unimod:422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid iminylated residue","synonyms":[{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:01170"}


id: PBO:0071653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 17","termid":"PBO:0071653"}


id: PBO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 6","termid":"PBO:0046145"}


id: GO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nucleic acids from one side of a membrane to the other. Nucleic acids are single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}


id: FYPO:0007533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks colocalize normally (i.e. indistinguishably from wild type) with nuclear pore complexes (NPCs). Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PMID:33159083","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal replication fork processing","termid":"FYPO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork colocalization with nuclear pore complex","synonyms":[{"name":"normal replication fork colocalization with NPC","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"normal replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"normal replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex","type":"exact"},{"name":"normal replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"}],"termid":"FYPO:0007533"}


id: PBO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog (predicted)","termid":"PBO:0004086"}


id: GO:0032389
data:
  {"annotated_genes":["SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70754],"is_not":false,"summary":null,"term":"GO:0032389"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MutLalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MLH1/PMS2 complex","type":"exact"},{"name":"MMR complex","type":"broad"},{"name":"MutL-alpha complex","type":"exact"}],"termid":"GO:0032389","terms_by_termid":{"GO:0032389":null}}


id: GO:0010975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection development","synonyms":[{"name":"regulation of neurite biosynthesis","type":"narrow"},{"name":"regulation of neurite development","type":"narrow"},{"name":"regulation of neurite formation","type":"narrow"},{"name":"regulation of neurite growth","type":"narrow"}],"termid":"GO:0010975"}


id: GO:0070649
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103552,111451],"is_not":false,"summary":null,"term":"GO:0070649"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["PMID:14671023","PMID:16959963","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle assembly","termid":"GO:0030046"},{"relation_name":"is_a","term_name":"formin-nucleated actin cable organization","termid":"GO:0110009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"formin-nucleated actin cable assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formin-nucleated actin cable formation","type":"exact"}],"termid":"GO:0070649","terms_by_termid":{"GO:0070649":null}}


id: PBO:0082318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p","termid":"PBO:0082318"}


id: PBO:0075202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 14","termid":"PBO:0075202"}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: PBO:0062111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 10 pseudogene","termid":"PBO:0062111"}


id: PBO:0081591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 517","termid":"PBO:0081591"}


id: GO:1990071
data:
  {"annotated_genes":["SJAG_04358","SJAG_02750","SJAG_02525","SJAG_04837","SJAG_02655","SJAG_03467","SJAG_04021","SJAG_04618","SJAG_01415","SJAG_03663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71449,74365,84427,85087,92887,94659,95284,98018,98854,105203],"is_not":false,"summary":null,"term":"GO:1990071"}]},"cv_name":"cellular_component","definition":"A complex that mediates intra-Golgi traffic, Golgi exit, endosome-to-Golgi traffic, and the trafficking of autophagy proteins from Golgi to the phagophore assembly site. Binds to a component of the COPI coat. In yeast it includes the following subunits: Bet3 (as homodimer), Bet5, Tca17, Trs20, Trs23, Trs31, Trs33, Trs65, Trs120, Trs130. The whole complex is thought to dimerize with itself.","definition_xrefs":["PMID:20375281","GOC:bhm","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005575","GO:0005768","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"TRAPPII protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990071","terms_by_termid":{"GO:1990071":null}}


id: GO:0014736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle atrophy","termid":"GO:0014735"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle atrophy","termid":"GO:0014736"}


id: FYPO:0009039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to potassium chloride","synonyms":[{"name":"resistance to potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride during vegetative growth","type":"exact"},{"name":"resistant to potassium chloride","type":"exact"}],"termid":"FYPO:0009039"}


id: PBO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear telomere cap complex subunit Ten1","termid":"PBO:0005292"}


id: FYPO:0000119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle assembly is abnormal. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle.","definition_xrefs":["PomBase:mah","GO:0051225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle assembly","secondary_identifiers":["FYPO:0000285"],"termid":"FYPO:0000119"}


id: GO:0050232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: putrescine + O2 + H2O = 4-aminobutanal + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.10","MetaCyc:PUTRESCINE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"putrescine oxidase activity","secondary_identifiers":["RHEA:18273"],"synonyms":[{"name":"putrescine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050232"}


id: FYPO:0000601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar transport","synonyms":[{"name":"normal vacuolar protein transport","type":"narrow"},{"name":"normal vacuolar transport during mitotic cell cycle","type":"related"},{"name":"normal vacuolar transport during vegetative growth","type":"exact"},{"name":"vacuolar transport: normal","type":"related"}],"termid":"FYPO:0000601"}


id: RO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"positively_regulated_by","termid":"RO:0002336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_positive_regulatory_component_activity","termid":"RO:0002015"}


id: SO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_2prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:092"],"synonyms":[{"name":"3,2'-O-dimethyluridine","type":"exact"},{"name":"m3Um","type":"exact"},{"name":"three two prime O dimethyluridine","type":"exact"}],"termid":"SO:0001375"}


id: GO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1) binding to viral RNA.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MDA-5 signaling pathway","synonyms":[{"name":"regulation of IFIH1 signaling pathway","type":"exact"},{"name":"regulation of MDA-5 signalling pathway","type":"exact"},{"name":"regulation of MDA5 signaling pathway","type":"exact"},{"name":"regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039533"}


id: PATO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000213 neurobehavioral function (obsolete PATO:0000213)","termid":"PATO:0000213"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: PBO:0083253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0083253"}


id: PBO:0065026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 4","termid":"PBO:0065026"}


id: PBO:0079413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 7","termid":"PBO:0079413"}


id: PATO:0001817
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fatigability which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased strength","termid":"PATO:0001779"},{"relation_name":"is_a","term_name":"fatigability","termid":"PATO:0001815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fatigability","synonyms":[{"name":"low fatigability","type":"exact"}],"termid":"PATO:0001817"}


id: PBO:0080119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UXT antisense RNA 1","termid":"PBO:0080119"}


id: PBO:0017497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter (predicted)","termid":"PBO:0017497"}


id: PBO:0081014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 2","termid":"PBO:0081014"}


id: GO:1990414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of a replication-born double-strand DNA break in which the DNA molecule is repaired using the homologous sequence of the sister chromatid which serves as a template to repair the breaks.","definition_xrefs":["PMID:12820977","PMID:16888651","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"replication-born double-strand break repair via sister chromatid exchange","synonyms":[{"name":"replication-born DSB repair by SCE","type":"exact"}],"termid":"GO:1990414"}


id: FYPO:0003075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein kinase activity","termid":"FYPO:0003075"}


id: GO:0097402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a neuroblast from one site to another, often during the development of a multicellular organism or multicellular structure. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["CL:0000031","GOC:jc","PMID:15543145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast migration","termid":"GO:0097402"}


id: PBO:0069040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 285, pseudogene","termid":"PBO:0069040"}


id: PBO:0069578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 851, pseudogene","termid":"PBO:0069578"}


id: GO:1902995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:sjp","PMID:12042316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid efflux","termid":"GO:1902994"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid efflux","synonyms":[{"name":"activation of phospholipid efflux","type":"narrow"},{"name":"activation of phospholipid export","type":"narrow"},{"name":"positive regulation of phospholipid export","type":"exact"},{"name":"up regulation of phospholipid efflux","type":"exact"},{"name":"up regulation of phospholipid export","type":"exact"},{"name":"up-regulation of phospholipid efflux","type":"exact"},{"name":"up-regulation of phospholipid export","type":"exact"},{"name":"upregulation of phospholipid efflux","type":"exact"},{"name":"upregulation of phospholipid export","type":"exact"}],"termid":"GO:1902995"}


id: GO:0040029
data:
  {"annotated_genes":["SJAG_00739","SJAG_02589","SJAG_02066","SJAG_00756","SJAG_03945","SJAG_01658","SJAG_01926","SJAG_02385","SJAG_00293","SJAG_02409","SJAG_04205","SJAG_04758","SJAG_00746","SJAG_03944","SJAG_03042","SJAG_01075","SJAG_04989","SJAG_02165","SJAG_04005","SJAG_03839","SJAG_00414","SJAG_00441","SJAG_03680","SJAG_02416","SJAG_02401","SJAG_00335","SJAG_04039","SJAG_03579","SJAG_00641","SJAG_02872","SJAG_03006","SJAG_02549","SJAG_02773","SJAG_03916","SJAG_02981","SJAG_03118","SJAG_00160","SJAG_00896","SJAG_02254","SJAG_03193","SJAG_01325","SJAG_01653","SJAG_00868","SJAG_01804","SJAG_02778","SJAG_00320","SJAG_04396","SJAG_03752","SJAG_04596","SJAG_02329","SJAG_02571","SJAG_07011","SJAG_01540","SJAG_00581","SJAG_03033","SJAG_01711","SJAG_01331","SJAG_02447","SJAG_01745","SJAG_04389","SJAG_00961","SJAG_01111","SJAG_03255","SJAG_02723","SJAG_01110","SJAG_02817","SJAG_02725","SJAG_00440","SJAG_02908","SJAG_03624","SJAG_02798","SJAG_03145","SJAG_03689","SJAG_01016","SJAG_00045","SJAG_04274","SJAG_00769","SJAG_04141","SJAG_02466","SJAG_02846","SJAG_03576","SJAG_03627","SJAG_01511","SJAG_01611","SJAG_03543","SJAG_02927","SJAG_03635","SJAG_04768","SJAG_03441","SJAG_01579","SJAG_04038","SJAG_01601","SJAG_01867","SJAG_02303","SJAG_03884","SJAG_03776","SJAG_02768","SJAG_04369","SJAG_04574","SJAG_04879","SJAG_01610","SJAG_00266","SJAG_04253","SJAG_00184","SJAG_02541","SJAG_05313","SJAG_04097","SJAG_00735","SJAG_03997","SJAG_03664","SJAG_04213","SJAG_01823","SJAG_04030","SJAG_02594","SJAG_03356","SJAG_01878","SJAG_01465","SJAG_02869","SJAG_05192","SJAG_02990","SJAG_05020","SJAG_00302","SJAG_00341","SJAG_01046","SJAG_03694","SJAG_02621","SJAG_01622","SJAG_02458","SJAG_02701","SJAG_02906","SJAG_00058","SJAG_01836","SJAG_03668","SJAG_00584","SJAG_03758","SJAG_04755","SJAG_01204","SJAG_03982","SJAG_00349","SJAG_04613","SJAG_04576","SJAG_01230","SJAG_00934","SJAG_03745","SJAG_02119","SJAG_02170","SJAG_03128","SJAG_01938","SJAG_02622","SJAG_02381","SJAG_01599","SJAG_03431","SJAG_01008","SJAG_00676","SJAG_03394","SJAG_04186","SJAG_04061","SJAG_03844","SJAG_04194","SJAG_03599","SJAG_03366","SJAG_02382","SJAG_03787","SJAG_02500","SJAG_00701","SJAG_00087","SJAG_02314","SJAG_00873","SJAG_01475","SJAG_01513","SJAG_02319","SJAG_00743","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86917,89022,111480,114014],"is_not":false,"summary":null,"term":"GO:0040029"},{"annotations":[106613,108921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[111795,89711,98708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[83937,89712,94460,94677,112355,112970,107941,110531,108382,107943,94699,86458,91754,107942,98542,98709],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[109301,70431,88247,114335,114336,110670,89973,109426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031507"},{"annotations":[88830,92801,98603,88865,92911,109451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045814"},{"annotations":[76301,102086],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[103900],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[76300],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061186"},{"annotations":[103575,109722,107947,108611,107450,85775,104717,87730,107948,107949,89082,98268,99579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[87023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[94519],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031453"},{"annotations":[103576,99580,109723,107451,87731,108612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[94130,86509],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[92772,95825],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[112971],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[87528,113313,92773,95826,112972],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[102772,108384,107203,103205,104515,99581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[112915,99678,99582,86952,105850,103392,108990,94683,88399,91124,103577,107452,111251,108613,71430,92317,113988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030466"},{"annotations":[83288,87906,86493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[101743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[110685,111252,94684,84534,101987,108991,109867,92318,113296,113989,86953,109613,89721,106013,107548,112916,105851,113190,84589,90940,106554,95093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"},{"annotations":[85776,113990,112917,99583,87733,84202,86954,108614,107453,103578,108992,92319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031509"},{"annotations":[108455,89419,94938,89147,84262,85790,84626,101065,104464,110296,85025,88440,110652,91486,108635,108472,89930,86300,109539,93396,89647,98604,104739,111553,89779,91054,104859,111616,89749,110533,112833,94067,108303,112762,105973,84860,112785,112149,110007,84120,83765,105838,100466,91491,102749,103873,109699,83941,102181,92240,92034,83452,85520,101209,100036,107094,87950,97077,109528,112493,90260,86401,112676,94227,98270,91079,89763,103301,98847,86415,102332,94694,92671,110961,83596,96497,100474,103110,107881,109614,93806,110665,87086,104965,89807,89834,102861,113174,111796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045815"}]},"cv_name":"biological_process","definition":"A process that modulates the frequency, rate or extent of gene expression through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or cytosine methylation of DNA. Once established, this regulation may be maintained over many cell divisions. It can also be heritable in the absence of the instigating signal.","definition_xrefs":["PMID:11498582","PMID:22243696","PMID:34414474","PMID:10521337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":173,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00058":null,"SJAG_00087":null,"SJAG_00160":null,"SJAG_00184":null,"SJAG_00266":null,"SJAG_00293":null,"SJAG_00302":null,"SJAG_00320":null,"SJAG_00335":null,"SJAG_00341":null,"SJAG_00349":null,"SJAG_00414":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00701":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00934":null,"SJAG_00961":null,"SJAG_01008":null,"SJAG_01016":null,"SJAG_01046":null,"SJAG_01075":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01204":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01331":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01511":null,"SJAG_01513":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01745":null,"SJAG_01804":null,"SJAG_01823":null,"SJAG_01836":null,"SJAG_01867":null,"SJAG_01878":null,"SJAG_01926":null,"SJAG_01938":null,"SJAG_02066":null,"SJAG_02119":null,"SJAG_02165":null,"SJAG_02170":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02311":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02329":null,"SJAG_02381":null,"SJAG_02382":null,"SJAG_02385":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02416":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02622":null,"SJAG_02701":null,"SJAG_02723":null,"SJAG_02725":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02817":null,"SJAG_02846":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03006":null,"SJAG_03033":null,"SJAG_03042":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03145":null,"SJAG_03193":null,"SJAG_03255":null,"SJAG_03356":null,"SJAG_03366":null,"SJAG_03394":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03543":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03624":null,"SJAG_03627":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03668":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03745":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03884":null,"SJAG_03916":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04039":null,"SJAG_04061":null,"SJAG_04097":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04253":null,"SJAG_04274":null,"SJAG_04369":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04574":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04768":null,"SJAG_04879":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05313":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"epigenetic regulation of gene expression","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:35226668":null},"synonyms":[{"name":"regulation of gene expression, epigenetic","type":"exact"}],"termid":"GO:0040029","terms_by_termid":{"GO:0000183":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0040029":null,"GO:0045814":null,"GO:0045815":null,"GO:0060906":null,"GO:0061186":null,"GO:0061188":null,"GO:0090052":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug57","termid":"PBO:0003429"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["PMID:21666597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: PBO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside mannosyltransferase","termid":"PBO:0000810"}


id: GO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a lamellipodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"lamellipodium membrane","termid":"GO:0031258"}


id: GO:0150036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:27296803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0099553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0150036"}


id: GO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing protein, DNA, and RNA molecules.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-DNA-RNA complex","termid":"GO:0001114"}


id: PBO:0056102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6B","termid":"PBO:0056102"}


id: PBO:0041621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CABP7 divergent transcript","termid":"PBO:0041621"}


id: SO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_7_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_7_trimethylguanosine","secondary_identifiers":["RNAMOD:091"],"synonyms":[{"name":"N2,N2,7-trimethylguanosine","type":"exact"},{"name":"m2,2,7G","type":"exact"}],"termid":"SO:0001339"}


id: PBO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16 (predicted)","termid":"PBO:0001134"}


id: GO:0071764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear outer membrane organization","synonyms":[{"name":"nuclear outer membrane organisation","type":"exact"},{"name":"nuclear outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0071764"}


id: PR:P10506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr1 gene.","definition_xrefs":["UniProtKB:P10506","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.13","synonyms":[{"name":"MAPK kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr1","type":"exact"}],"termid":"PR:P10506"}


id: PBO:0080051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 22","termid":"PBO:0080051"}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: GO:0050944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthophore differentiation","termid":"GO:0050938"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of xanthophore differentiation","synonyms":[{"name":"down regulation of xanthophore differentiation","type":"exact"},{"name":"down-regulation of xanthophore differentiation","type":"exact"},{"name":"downregulation of xanthophore differentiation","type":"exact"},{"name":"inhibition of xanthophore differentiation","type":"narrow"}],"termid":"GO:0050944"}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: PBO:0088021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP A protein; homolog of human U1-A; involved in nuclear mRNA splicing","termid":"PBO:0088021"}


id: PBO:0053019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 pseudogene 1","termid":"PBO:0053019"}


id: PBO:0079443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 1","termid":"PBO:0079443"}


id: GO:0043859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides.","definition_xrefs":["PMID:10429200"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanophycinase activity (obsolete GO:0043859)","synonyms":[{"name":"cyanophycinase activity","type":"exact"}],"termid":"GO:0043859"}


id: PBO:0004771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs23 (predicted)","termid":"PBO:0004771"}


id: RO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between two neurons connected directly via a synapse, or indirectly via a series of synaptically connected neurons.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_neural_circuit_with","termid":"RO:0000300"}


id: GO:0044461
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the bacterial-type flagellum, a 20 nm diameter filament composed of subunits of flagellin driven passively at its base by a motor powered by a transmembrane ion potential, typically a proton or sodium potential.","definition_xrefs":["DOI:10.1002/9780470015902.a0000744.pub4","PMID:10572114","PMID:12624192","GOC:jl","GOC:mtg_sensu","PMID:25251856","GOC:cilia"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type flagellum part (obsolete GO:0044461)","synonyms":[{"name":"flagellin-based flagellum part","type":"exact"}],"termid":"GO:0044461"}


id: GO:0098021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Component of the virus capsid (head), located on the outer head surface. Involved in the stabilization of the head structure and usually non-essential.","definition_xrefs":["GOC:bm","VZ:4398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, decoration","synonyms":[{"name":"decoration protein","type":"related"}],"termid":"GO:0098021"}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["GOC:giardia","ISBN:0-444-81258-X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: GO:0033953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,3-alpha-L-galactosidic linkages in agarose, yielding agarotetraose as the major product.","definition_xrefs":["EC:3.2.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-agarase activity","secondary_identifiers":["MetaCyc:3.2.1.158-RXN"],"synonyms":[{"name":"agarase A33 activity","type":"narrow"},{"name":"agarase activity","type":"broad"},{"name":"agarose 3-glycanohydrolase activity","type":"broad"}],"termid":"GO:0033953"}


id: PBO:0040561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2","termid":"PBO:0040561"}


id: PBO:0046249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 5","termid":"PBO:0046249"}


id: PATO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal dimensions or measurements.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isometrical","termid":"PATO:0001573"}


id: GO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the metanephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in metanephros development","synonyms":[{"name":"cell-cell signalling involved in metanephros development","type":"exact"}],"termid":"GO:0072204"}


id: GO:0050124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acylneuraminate 9-phosphate + H2O = N-acylneuraminate + phosphate.","definition_xrefs":["EC:3.1.3.29","MetaCyc:N-ACYLNEURAMINATE-9-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylneuraminate-9-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-4084989","RHEA:13057"],"synonyms":[{"name":"N-acylneuraminate-9-phosphate phosphohydrolase activity","type":"related"},{"name":"N-acylneuraminic (sialic) acid 9-phosphatase activity","type":"related"},{"name":"N-acylneuraminic acid 9-phosphate phosphatase activity","type":"related"},{"name":"acylneuraminate 9-phosphatase activity","type":"related"}],"termid":"GO:0050124"}


id: PBO:0064935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase targeting COQ7","termid":"PBO:0064935"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["RHEA:18329","EC:1.1.1.228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03745","MetaCyc:+-SABINOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: PBO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC amino acid transporter (predicted)","termid":"PBO:0004878"}


id: FYPO:0003488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to ionizing radiation (obsolete FYPO:0003488)","synonyms":[{"name":"elongated cell during cellular response to IR","type":"exact"},{"name":"elongated cell during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"elongated in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003488"}


id: PBO:0056130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphatic vessel endothelial hyaluronan receptor 1","termid":"PBO:0056130"}


id: FYPO:0004904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromere central core during vegetative growth","secondary_identifiers":["FYPO:0005224"],"synonyms":[{"name":"decreased protein localisation to centromere central core during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric central core","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric central core during vegetative growth","type":"exact"},{"name":"reduced protein localization to centromere central core during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004904"}


id: GO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by symbiont","termid":"GO:0052460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by symbiont","synonyms":[{"name":"activation by host of nutrient release from symbiont","type":"narrow"},{"name":"positive regulation by host of nutrient release from symbiont","type":"exact"},{"name":"promotion of nutrient release from symbiont","type":"exact"},{"name":"stimulation by host of nutrient release from symbiont","type":"narrow"},{"name":"up regulation by host of nutrient release from symbiont","type":"exact"},{"name":"up-regulation by host of nutrient release from symbiont","type":"exact"},{"name":"upregulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052519"}


id: PBO:0053331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 163","termid":"PBO:0053331"}


id: PBO:0053623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 665","termid":"PBO:0053623"}


id: PBO:0054154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1521","termid":"PBO:0054154"}


id: PBO:0064097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeodomain 2","termid":"PBO:0064097"}


id: GO:0003961
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76013],"is_not":false,"summary":null,"term":"GO:0003961"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-acetyl-L-homoserine + methanethiol = L-methionine + acetate. Also reacts with other thiols and H2S, producing homocysteine or thioethers.","definition_xrefs":["EC:2.5.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"O-acetylhomoserine aminocarboxypropyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019282","RHEA:10048","MetaCyc:O-ACETYLHOMOSERINE-THIOL-LYASE-RXN"],"synonyms":[{"name":"L-methionine anabolism, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine formation, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"L-methionine synthesis, direct, from O-acetyl-L-homoserine","type":"exact"},{"name":"O-acetyl-L-homoserine acetate-lyase (adding methanethiol) activity","type":"related"},{"name":"O-acetyl-L-homoserine sulfhydrolase activity","type":"related"},{"name":"O-acetyl-L-homoserine:methanethiol 3-amino-3-carboxypropyltransferase activity","type":"related"},{"name":"O-acetylhomoserine (thiol)-lyase activity","type":"exact"},{"name":"O-acetylhomoserine sulfhydrolase activity","type":"related"},{"name":"OAH sulfhydrylase activity","type":"related"},{"name":"methionine biosynthetic process, direct, from O-acetyl-L-homoserine","type":"exact"}],"termid":"GO:0003961","terms_by_termid":{"GO:0003961":null}}


id: GO:0002702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the production of molecular mediator of immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"positively_regulates","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of production of molecular mediator of immune response","synonyms":[{"name":"activation of production of molecular mediator of immune response","type":"narrow"},{"name":"stimulation of production of molecular mediator of immune response","type":"narrow"},{"name":"up regulation of production of molecular mediator of immune response","type":"exact"},{"name":"up-regulation of production of molecular mediator of immune response","type":"exact"},{"name":"upregulation of production of molecular mediator of immune response","type":"exact"}],"termid":"GO:0002702"}


id: GO:0120276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["PMID:25397684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebral blood circulation","synonyms":[{"name":"regulation of cerebrum blood circulation","type":"exact"},{"name":"regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120276"}


id: GO:0071695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure to attain its fully functional state.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure maturation","termid":"GO:0071695"}


id: PBO:0064323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 5","termid":"PBO:0064323"}


id: PR:Q9HGL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ubiquitin-like protein C800.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.12c","synonyms":[{"name":"Spom972h-SPBC800.12c","type":"exact"}],"termid":"PR:Q9HGL0"}


id: null:local:null
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"null:local:null"}


id: PBO:0075485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 3","termid":"PBO:0075485"}


id: PR:O13801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nrp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C17H9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.04c","synonyms":[{"name":"Spom972h-nrp1","type":"exact"}],"termid":"PR:O13801"}


id: PBO:0054397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1793","termid":"PBO:0054397"}


id: GO:0045774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"negative regulation of integrin biosynthetic process","termid":"GO:0045720"},{"relation_name":"negatively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"down regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"down-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"downregulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"inhibition of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of beta 2 integrin anabolism","type":"exact"},{"name":"negative regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"negative regulation of beta 2 integrin formation","type":"exact"},{"name":"negative regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045774"}


id: PBO:0046404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb homolog 1","termid":"PBO:0046404"}


id: GO:0034792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypophosphite + 2-oxoglutarate + O2 = succinate + phosphite + CO2.","definition_xrefs":["UM-BBD_reactionID:r1058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hypophosphite dioxygenase activity","termid":"GO:0034792"}


id: FYPO:0005898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"increased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005898"}


id: GO:1900537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glucose homeostasis (obsolete GO:1900537)","synonyms":[{"name":"down regulation of glucose homeostasis","type":"exact"},{"name":"down-regulation of glucose homeostasis","type":"exact"},{"name":"downregulation of glucose homeostasis","type":"exact"},{"name":"inhibition of glucose homeostasis","type":"narrow"},{"name":"negative regulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900537"}


id: PBO:0055939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 46","termid":"PBO:0055939"}


id: PBO:0046831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 4","termid":"PBO:0046831"}


id: GO:0010188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a microbial phytotoxin stimulus. A microbial phytotoxin is a chemical substance produced by microbes which is toxic to plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to microbial phytotoxin","termid":"GO:0010188"}


id: PBO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor protein (predicted)","termid":"PBO:0002384"}


id: PBO:0026835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_polymerase_activity","termid":"PBO:0026835"}


id: PBO:0071517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 20","termid":"PBO:0071517"}


id: PBO:0031420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_damage_checkpoint","termid":"PBO:0031420"}


id: GO:0005275
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amines, including polyamines, from one side of a membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"amine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005279"],"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"broad"},{"name":"amine/polyamine transmembrane transporter activity","type":"exact"},{"name":"amino acid-polyamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0005275","terms_by_termid":{"GO:0015200":null}}


id: GO:0015444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mg2+(out) = ADP + phosphate + Mg2+(in).","definition_xrefs":["RHEA:10260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transporter activity","termid":"GO:0015095"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type magnesium transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-250","EC:7.2.2.14"],"synonyms":[{"name":"ATP phosphohydrolase (Mg2+-importing)","type":"related"},{"name":"Mg(2+)-importing ATPase activity","type":"related"},{"name":"Mg2+-importing ATPase activity","type":"related"},{"name":"magnesium importing ATPase activity","type":"exact"},{"name":"magnesium transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"magnesium-translocating P-type ATPase activity","type":"related"}],"termid":"GO:0015444"}


id: FYPO:0004548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"normal protein kinase activity during cellular response to HU","type":"exact"},{"name":"normal protein kinase activity in response to hydroxyurea","type":"related"}],"termid":"FYPO:0004548"}


id: PBO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_paraquat","termid":"PBO:0030514"}


id: GO:0008354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell migration","synonyms":[{"name":"germ-cell migration","type":"exact"},{"name":"primordial germ cell migration","type":"related"}],"termid":"GO:0008354"}


id: GO:1904344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastric mucosal blood circulation.","definition_xrefs":["GO_REF:0000058","PMID:10807413","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"gastric mucosal blood circulation","termid":"GO:1990768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastric mucosal blood circulation","synonyms":[{"name":"regulation of stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1904344"}


id: GO:0102774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 4-coumaryl-CoA + 3 malonyl-CoA( = p-coumaroyltriacetic acid lactone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"p-coumaroyltriacetic acid lactone synthase activity","secondary_identifiers":["MetaCyc:RXN-7822"],"termid":"GO:0102774"}


id: GO:0047349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + CTP = CDP-ribitol + diphosphate.","definition_xrefs":["EC:2.7.7.40","RHEA:12456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-ribitol-5-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02921","MetaCyc:2.7.7.40-RXN"],"synonyms":[{"name":"CDP ribitol pyrophosphorylase activity","type":"related"},{"name":"CDP-ribitol diphosphorylase activity","type":"related"},{"name":"CDP-ribitol pyrophosphorylase activity","type":"related"},{"name":"CTP:D-ribitol-5-phosphate cytidylyltransferase activity","type":"exact"},{"name":"cytidine diphosphate ribitol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoribitol pyrophosphorylase activity","type":"related"},{"name":"ribitol 5-phosphate cytidylyltransferase activity","type":"related"}],"termid":"GO:0047349"}


id: PBO:0075086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 136","termid":"PBO:0075086"}


id: PBO:0085643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in localization of Cdc24p to the site of bud growth; may act as a membrane anchor; localizes to the bud neck and bud tip; potentially phosphorylated by Cdc28p; TOS2 has a paralog, SKG6, that arose from the whole genome duplication","termid":"PBO:0085643"}


id: GO:0099521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the presynaptic membrane, that is involved in regulation of presynaptic membrane potential.","definition_xrefs":["GOC:dos","PMID:17220883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0099521"}


id: GO:0042565
data:
  {"annotated_genes":["SJAG_01534"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75618],"is_not":false,"summary":null,"term":"GO:0042565"}]},"cv_name":"cellular_component","definition":"A complex which usually consists of three components, e.g. in Xenopus and yeast, the export receptor CRM1 (also known as exportin 1), the Ran protein and any RNA with a nuclear export sequence (NES). The complex acts to export RNA molecules with a NES from the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323123","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01534":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA nuclear export complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042565","terms_by_termid":{"GO:0042565":null}}


id: PBO:0056311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP2K5 divergent transcript","termid":"PBO:0056311"}


id: PBO:0049131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 2","termid":"PBO:0049131"}


id: PBO:0072279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 8","termid":"PBO:0072279"}


id: FYECO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Uracil was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil absent","termid":"FYECO:0000233"}


id: PBO:0068580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 31, pseudogene","termid":"PBO:0068580"}


id: GO:0060670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branches of the fetal placental villi are generated and organized. The villous part of the placenta is called the labyrinth layer.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"}


id: GO:0009693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthetic process","secondary_identifiers":["MetaCyc:ETHYL-PWY","GO:0042456"],"synonyms":[{"name":"ethene biosynthesis","type":"exact"},{"name":"ethene biosynthesis from L-methionine","type":"exact"},{"name":"ethene biosynthetic process","type":"exact"},{"name":"ethene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene anabolism","type":"exact"},{"name":"ethylene biosynthesis","type":"exact"},{"name":"ethylene biosynthesis from L-methionine","type":"exact"},{"name":"ethylene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene formation","type":"exact"},{"name":"ethylene synthesis","type":"exact"}],"termid":"GO:0009693"}


id: PBO:0080454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 1","termid":"PBO:0080454"}


id: PR:Q9P3E5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.06c gene.","definition_xrefs":["UniProtKB:Q9P3E5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C750.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.06c","synonyms":[{"name":"Spom972h-SPAC750.06c","type":"exact"}],"termid":"PR:Q9P3E5"}


id: PBO:0067585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 744, pseudogene","termid":"PBO:0067585"}


id: PR:O13839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fin1 gene.","definition_xrefs":["UniProtKB:O13839","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"Spom972h-fin1","type":"exact"}],"termid":"PR:O13839"}


id: PR:P36580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fructose-bisphosphate aldolase class 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.07","secondary_identifiers":["UniProtKB:P36580"],"synonyms":[{"name":"FBP aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FBPA (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fbaA","type":"exact"},{"name":"fructose-1,6-bisphosphate aldolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36580"}


id: GO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a peroxisome by microautophagy.","definition_xrefs":["PMID:16973210","PMID:12914914","PMID:15350980","GOC:autophagy","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"micropexophagy","termid":"GO:0000426"}


id: PATO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000977 absolute permeability value (obsolete PATO:0000977)","termid":"PATO:0000977"}


id: PBO:0056306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 2","termid":"PBO:0056306"}


id: PBO:0067765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 65","termid":"PBO:0067765"}


id: GO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction sulfoquinovose = 6-deoxy-6-sulfofructose.","definition_xrefs":["PMID:24463506","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"sulfoquinovose isomerase activity","termid":"GO:0061593"}


id: PBO:0072830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sin3A associated protein 18","termid":"PBO:0072830"}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: GO:0070459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of prolactin, a peptide hormone that stimulates lactation, from secretory granules in the anterior pituitary.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"prolactin secretion","termid":"GO:0070459"}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: PBO:0047877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(4)(q12)","termid":"PBO:0047877"}


id: PBO:0028463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_interphase","termid":"PBO:0028463"}


id: GO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon + H2O = 2-oxobut-3-enanoate + 2,5,6-trihydroxy-3-methylpyridine.","definition_xrefs":["MetaCyc:RXN-645","UM-BBD_reactionID:r0051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-methyl-5-hydroxy-6-(3-carboxy-3-oxopropenyl)-1H-2-pyridon hydratase-aldolase activity","termid":"GO:0018815"}


id: PBO:0110028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 10","termid":"PBO:0110028"}


id: PBO:0082019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZXD family zinc finger C","termid":"PBO:0082019"}


id: PBO:0040680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer anti-estrogen resistance 4","termid":"PBO:0040680"}


id: PBO:0058842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8071-2","termid":"PBO:0058842"}


id: PBO:0076033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK32A antisense RNA 1","termid":"PBO:0076033"}


id: PBO:0029532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_septum","termid":"PBO:0029532"}


id: GO:0047582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylene-L-glutamine + H2O = 4-methylene-L-glutamate + NH4.","definition_xrefs":["EC:3.5.1.67","RHEA:14741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-methyleneglutaminase activity","secondary_identifiers":["KEGG_REACTION:R02712","MetaCyc:4-METHYLENEGLUTAMINASE-RXN"],"synonyms":[{"name":"4-methylene-L-glutamine amidohydrolase activity","type":"related"},{"name":"4-methyleneglutamine amidohydrolase activity","type":"related"},{"name":"4-methyleneglutamine deamidase activity","type":"related"}],"termid":"GO:0047582"}


id: GO:0140866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-20 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34755534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-20-mediated signaling pathway","synonyms":[{"name":"IL-20-mediated signaling pathway","type":"exact"},{"name":"interleukin-20-mediated signalling pathway","type":"exact"}],"termid":"GO:0140866"}


