# terms

id: PBO:0041888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated auxiliary subunit delta","termid":"PBO:0041888"}


id: FYECO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells or samples were exposed to X-rays.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionizing radiation","termid":"FYECO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-rays","synonyms":[{"name":"X rays","type":"exact"}],"termid":"FYECO:0000425"}


id: PBO:0039294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG9 intronic transcript 1","termid":"PBO:0039294"}


id: GO:0060614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of mammary gland development in the male by an androgen binding to its receptor, causing a change in state or activity of a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"negatively_regulates","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of mammary gland development in males by androgen receptor signaling pathway","synonyms":[{"name":"negative regulation of mammary gland development in males by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060614"}


id: PBO:0043150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 18","termid":"PBO:0043150"}


id: FYPO:0007472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange is abnormal. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","GO:0043486","PMID:31315658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone turnover","termid":"FYPO:0007472"}


id: PBO:0072650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 3","termid":"PBO:0072650"}


id: PR:O14165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridine-5'-phosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4C5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.01","secondary_identifiers":["UniProtKB:O14165"],"synonyms":[{"name":"Spom972h-HDHD1","type":"exact"}],"termid":"PR:O14165"}


id: GO:2001239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"regulation of dependence receptor signaling pathway","type":"related"},{"name":"regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001239"}


id: PBO:0063097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator alpha","termid":"PBO:0063097"}


id: GO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis of the embryonic heart tube in space to define an area or volume in which specific patterns of cell differentiation will take place.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left/right pattern formation","termid":"GO:0060972"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube left/right pattern formation","termid":"GO:0060971"}


id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: GO:0018976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,2,3-tribromopropane, a toxic and volatile organic compound commonly used as a nematocide in agriculture.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2,3-tribromopropane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tbp"],"synonyms":[{"name":"1,2,3-tribromopropane metabolism","type":"exact"}],"termid":"GO:0018976"}


id: GO:1905308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.","definition_xrefs":["PMID:26108447","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to miconazole","termid":"GO:1905307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to miconazole","termid":"GO:1905308"}


id: PBO:0109082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3106","termid":"PBO:0109082"}


id: PBO:0038415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulates_activity_of","termid":"PBO:0038415"}


id: PBO:0029909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_terbinafine","termid":"PBO:0029909"}


id: PBO:0085212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC motif binding protein involved in rRNA and ribosome biogenesis; subunit of the RPD3L histone deacetylase complex; Myb-like HTH transcription factor; hypophosphorylated by rapamycin treatment in a Sch9p-dependent manner; activated in stochastic pulses of nuclear localization","termid":"PBO:0085212"}


id: GO:0000706
data:
  {"annotated_genes":["SJAG_05295","SJAG_01076","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78085,103177,112051],"is_not":false,"summary":null,"term":"GO:0000706"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs. This takes place during meiosis.","definition_xrefs":["GOC:elh","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA double-strand break processing","termid":"GO:0000729"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01832":null,"SJAG_05295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000706","terms_by_termid":{"GO:0000706":null}}


id: GO:0031735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR10 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CCR10 chemokine receptor binding","synonyms":[{"name":"CCR10 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031735"}


id: GO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR3 chemokine receptor.","definition_xrefs":["GOC:jid","PMID:10556837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CXCR3 chemokine receptor binding","termid":"GO:0048248"}


id: PBO:0016899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule binding protein Mcp1","termid":"PBO:0016899"}


id: PBO:0051149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30-2 (pseudogene)","termid":"PBO:0051149"}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: GO:1990094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The positive regulation of the receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:18442977"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of N-methyl-D-aspartate receptor clustering (obsolete GO:1990094)","synonyms":[{"name":"positive regulation of N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"positive regulation of NMDA receptor clustering","type":"exact"}],"termid":"GO:1990094"}


id: GO:0008106
data:
  {"annotated_genes":["SJAG_01869","SJAG_03958","SJAG_02010","SJAG_02963","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76505],"is_not":false,"summary":null,"term":"GO:0008106"},{"annotations":[87476,73553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[96700,91356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[96701,91357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NADP+ = an aldehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldo-keto reductase (NADP) activity","termid":"GO:0004033"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_02963":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alcohol dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALCOHOL-DEHYDROGENASE-NADP+-RXN","MetaCyc:RXN0-7119","RHEA:15937"],"synonyms":[{"name":"NADP-aldehyde reductase activity","type":"exact"},{"name":"alcohol:NADP dehydrogenase activity","type":"exact"},{"name":"aldehyde reductase (NADPH) activity","type":"related"},{"name":"aldehyde reductase (NADPH2) activity","type":"exact"}],"termid":"GO:0008106","terms_by_termid":{"GO:0004032":null,"GO:0008106":null,"GO:0032866":null,"GO:0032867":null}}


id: PBO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eomesodermin","termid":"PBO:0046387"}


id: PBO:0054725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2134","termid":"PBO:0054725"}


id: PBO:0088301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35A","termid":"PBO:0088301"}


id: PBO:0089705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase beta subunit Atp2","termid":"PBO:0089705"}


id: GO:0072744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to trichodermin","termid":"GO:1901324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trichodermin","termid":"GO:0072744"}


id: GO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of NK T cell activation","termid":"GO:0051133"},{"relation_name":"negatively_regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell activation","synonyms":[{"name":"down regulation of NK T cell activation","type":"exact"},{"name":"down-regulation of NK T cell activation","type":"exact"},{"name":"downregulation of NK T cell activation","type":"exact"},{"name":"inhibition of NK T cell activation","type":"narrow"},{"name":"negative regulation of NK T lymphocyte activation","type":"exact"},{"name":"negative regulation of NK T-cell activation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte activation","type":"exact"},{"name":"negative regulation of NKT cell activation","type":"exact"},{"name":"negative regulation of NT cell activation","type":"exact"},{"name":"negative regulation of natural T cell activation","type":"exact"},{"name":"negative regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051134"}


id: GO:0050000
data:
  {"annotated_genes":["SJAG_03327","SJAG_03680","SJAG_07002","SJAG_01067","SJAG_04280","SJAG_00646","SJAG_03217","SJAG_04140","SJAG_00756","SJAG_02761","SJAG_00418","SJAG_02346","SJAG_00207","SJAG_02045","SJAG_03287","SJAG_03540","SJAG_05295","SJAG_05260","SJAG_04745","SJAG_02731","SJAG_03437","SJAG_00082","SJAG_00794","SJAG_02698","SJAG_04884","SJAG_01297","SJAG_05319","SJAG_01775","SJAG_05290","SJAG_00335","SJAG_02837","SJAG_03685","SJAG_03926","SJAG_04623","SJAG_04040","SJAG_01601","SJAG_01538","SJAG_01370","SJAG_02737","SJAG_02286","SJAG_04259","SJAG_01837","SJAG_05196","SJAG_02336","SJAG_04412","SJAG_03048","SJAG_01805","SJAG_03449","SJAG_00930","SJAG_02814","SJAG_04076","SJAG_04142","SJAG_05220","SJAG_03126","SJAG_02624","SJAG_05266","SJAG_01745","SJAG_02451","SJAG_00918","SJAG_00768","SJAG_03299","SJAG_03092","SJAG_00302","SJAG_05226","SJAG_03698","SJAG_03683","SJAG_01777","SJAG_00678","SJAG_01211","SJAG_04508","SJAG_01224","SJAG_03543","SJAG_01278","SJAG_01263","SJAG_03989","SJAG_03220","SJAG_01082","SJAG_01613","SJAG_01371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83657,89467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[93478,74958,72529,83786,95904,83549,91162,113840,107027,100917,86686,105678,113337,71794,111785,85764,105720,87060],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[87017,84824,90229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140698"},{"annotations":[98307,112184,87018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[92302,75218,78010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990683"},{"annotations":[112298,94180,86002,96850,109100,110795],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[111921],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0120110"},{"annotations":[103666],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[101388,85486],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[100548,83194,85487,98308,95442],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[89435,94773,104539,113340,113843,95906,111190,97931,90913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[92303,111210,112914,112779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[109302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[90385,105287],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[95908,99384,103669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"},{"annotations":[89822,94780,103670,99385,94182],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[103671,102923,109102,109802,94680,85103,112159,113870,105271,89469,84889,94184,97932,99024,107944,86674,85469,104283,96037,89823,99386,109404,108551,107945,107946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[85489,112115,100549,94682,75253],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0044820"},{"annotations":[97859],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[97868],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904537"},{"annotations":[111275,100622,107301],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[97878,111931,89443,106548,85722],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0140429"},{"annotations":[111934],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[104541],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[104285,109406,111192,105721,105273,85471,90914,94188,100920,86676,93479,96854,104542,105681,102925,103247,84891,108552,89448,109105,96039,91163,112161,97933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[112190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"},{"annotations":[87024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140464"},{"annotations":[74889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034398"}]},"cv_name":"biological_process","definition":"Any process in which a chromosome is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle 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id: PBO:0052897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-8","termid":"PBO:0052897"}


id: SO:1000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The replacement of a single amino acid by another.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000093 sequence_variant_causing_amino_acid_substitution (obsolete SO:1000093)","synonyms":[{"name":"mutation causing amino acid substitution","type":"related"},{"name":"sequence variant causing amino acid substitution","type":"exact"}],"termid":"SO:1000093"}


id: PBO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF ubiquitin ligase complex subunit Skp1","termid":"PBO:0003495"}


id: PBO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 2","termid":"PBO:0044473"}


id: PBO:0029880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_binding","termid":"PBO:0029880"}


id: GO:0006567
data:
  {"annotated_genes":["SJAG_00830","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72043,76468],"is_not":false,"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine metabolic process","termid":"GO:0006566"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"threonine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:THREOCAT-PWY","UM-BBD_pathwayID:met"],"synonyms":[{"name":"threonine breakdown","type":"exact"},{"name":"threonine catabolism","type":"exact"},{"name":"threonine degradation","type":"exact"}],"termid":"GO:0006567","terms_by_termid":{"GO:0006567":null}}


id: PR:Q09905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded by the Schizosaccharomyces pombe 972h- aps3 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 complex subunit sigma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.05","secondary_identifiers":["UniProtKB:Q09905"],"synonyms":[{"name":"AP-3 complex sigma3A subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aps3","type":"exact"},{"name":"adaptor-related protein complex 3 subunit sigma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin-associated/assembly/adaptor protein, small 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma-adaptin 3A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sigma3-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09905"}


id: FYPO:0001084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level","synonyms":[{"name":"increased cell wall alpha-D-glucan level","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation","type":"related"},{"name":"increased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001084"}


id: PBO:0005409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf5","termid":"PBO:0005409"}


id: PBO:0064302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 5 (inactive)","termid":"PBO:0064302"}


id: PBO:0054008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1338","termid":"PBO:0054008"}


id: GO:0008653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipopolysaccharides, a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"liposaccharide metabolic process","termid":"GO:1903509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide metabolic process","synonyms":[{"name":"LPS metabolic process","type":"exact"},{"name":"lipopolysaccharide metabolism","type":"exact"}],"termid":"GO:0008653"}


id: PBO:0073781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 3","termid":"PBO:0073781"}


id: PBO:0050050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, N (pseudogene)","termid":"PBO:0050050"}


id: SO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcription units or transcribed coding sequences.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unit_of_gene_expression","synonyms":[{"name":"unit of gene expression","type":"exact"}],"termid":"SO:0002300"}


id: GO:0005561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid (obsolete GO:0005561)","synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"GO:0005561"}


id: PBO:0082617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of 90S preribosomes; involved in early cleavages of the 35S pre-rRNA and in production of the 40S ribosomal subunit","termid":"PBO:0082617"}


id: PBO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gma12","termid":"PBO:0005082"}


id: PBO:0054248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1630","termid":"PBO:0054248"}


id: PBO:0049979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein nuclear import factor hikeshi","termid":"PBO:0049979"}


id: PBO:0089094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear/mitochondrial metal-dependent protein hydrolase, human MYG1 ortholog","termid":"PBO:0089094"}


id: GO:1904465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of matrix metallopeptidase secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8679543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of matrix metallopeptidase secretion","termid":"GO:1904464"},{"relation_name":"negatively_regulates","term_name":"matrix metallopeptidase secretion","termid":"GO:1990773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of matrix metallopeptidase secretion","synonyms":[{"name":"down regulation of MMP secretion","type":"exact"},{"name":"down regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"down-regulation of MMP secretion","type":"exact"},{"name":"down-regulation of matrix metallopeptidase secretion","type":"exact"},{"name":"down-regulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"downregulation of MMP secretion","type":"exact"},{"name":"downregulation of matrix metallopeptidase secretion","type":"exact"},{"name":"downregulation of matrix metalloproteinase secretion","type":"narrow"},{"name":"inhibition of MMP secretion","type":"narrow"},{"name":"inhibition of matrix metallopeptidase secretion","type":"narrow"},{"name":"inhibition of matrix metalloproteinase secretion","type":"narrow"},{"name":"negative regulation of MMP secretion","type":"exact"},{"name":"negative regulation of matrix metalloproteinase secretion","type":"narrow"}],"termid":"GO:1904465"}


id: GO:0045642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"positively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basophil differentiation","synonyms":[{"name":"activation of basophil differentiation","type":"narrow"},{"name":"stimulation of basophil differentiation","type":"narrow"},{"name":"up regulation of basophil differentiation","type":"exact"},{"name":"up-regulation of basophil differentiation","type":"exact"},{"name":"upregulation of basophil differentiation","type":"exact"}],"termid":"GO:0045642"}


id: PBO:0088575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3245 nucleolar protein, conserved in fungi and plant family","termid":"PBO:0088575"}


id: GO:0071950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the reduced form, FADH2, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide binding","termid":"GO:0050660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FADH2 binding","synonyms":[{"name":"reduced flavin adenine dinucleotide binding","type":"exact"},{"name":"reduced flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0071950"}


id: PBO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcripts Altered in Meiosis","termid":"PBO:0000680"}


id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: PBO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-5","termid":"PBO:0052849"}


id: PBO:0087940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site; human homolog EEF1B2 can complement yeast efb1 mutants","termid":"PBO:0087940"}


id: PBO:0071895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 33","termid":"PBO:0071895"}


id: PBO:0076304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2","termid":"PBO:0076304"}


id: PBO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,B","termid":"PBO:0005180"}


id: PBO:0058045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4266","termid":"PBO:0058045"}


id: PBO:0088386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase","termid":"PBO:0088386"}


id: PBO:0063379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDC antisense RNA 1","termid":"PBO:0063379"}


id: PBO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously expressed prefoldin like chaperone","termid":"PBO:0080118"}


id: GO:2000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of opioid receptor signaling pathway","synonyms":[{"name":"regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000474"}


id: PBO:0078232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 14","termid":"PBO:0078232"}


id: PBO:0070851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 4","termid":"PBO:0070851"}


id: PBO:0043907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRK like proto-oncogene, adaptor protein","termid":"PBO:0043907"}


id: PBO:0030852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity","termid":"PBO:0030852"}


id: GO:1902247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of geranylgeranyl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"geranylgeranyl diphosphate catabolic process","synonyms":[{"name":"geranylgeranyl diphosphate breakdown","type":"exact"},{"name":"geranylgeranyl diphosphate catabolism","type":"exact"},{"name":"geranylgeranyl diphosphate degradation","type":"exact"}],"termid":"GO:1902247"}


id: GO:0033514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate L-pipecolate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006790","GO:0055086","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via L-pipecolate","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via L-pipecolate","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via L-pipecolate","type":"exact"}],"termid":"GO:0033514"}


id: GO:0032170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:mah","GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pseudohyphal septin ring","termid":"GO:0032170"}


id: GO:0102305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-trans,10-trans-geranylgeranyl diphosphate + H2O = (13E)-labda-7,13-dien-15-ol + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:32075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"(13E)-labda-7,13-dien-15-ol synthase activity","secondary_identifiers":["MetaCyc:RXN-12892","EC:3.1.7.10"],"termid":"GO:0102305"}


id: PBO:0042840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP44 antisense RNA 1","termid":"PBO:0042840"}


id: GO:0034180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 13 signaling pathway","termid":"GO:0034179"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"negative regulation of TLR13 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034180"}


id: PBO:0069453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 718, pseudogene","termid":"PBO:0069453"}


id: PBO:0016973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR90","termid":"PBO:0016973"}


id: GO:1903891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GOC:bf","PMID:22013210","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"regulation of ATF6 branch of UPR","type":"exact"},{"name":"regulation of ATF6 signal transduction pathway","type":"broad"},{"name":"regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903891"}


id: GO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to protein stimulus (obsolete GO:0071445)","synonyms":[{"name":"cellular response to protein stimulus","type":"exact"}],"termid":"GO:0071445"}


id: FYPO:0000381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased macroautophagy","synonyms":[{"name":"autophagy: decreased","type":"broad"},{"name":"decreased autophagy","type":"broad"},{"name":"reduced macroautophagy","type":"exact"}],"termid":"FYPO:0000381"}


id: FYPO:0006095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal actin filament bundle assembly","synonyms":[{"name":"normal actin bundling","type":"exact"},{"name":"normal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"normal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006095"}


id: PBO:0049890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 9","termid":"PBO:0049890"}


id: PBO:0075981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5B","termid":"PBO:0075981"}


id: PBO:0046313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoglin","termid":"PBO:0046313"}


id: PBO:0079237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9C","termid":"PBO:0079237"}


id: PBO:0090820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine 32-2'-O)-methyltransferase regulator Trm732","termid":"PBO:0090820"}


id: FYPO:0006872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased histone H2A phosphorylation during cellular response to IR","type":"exact"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006872"}


id: GO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/uridine permease activity (obsolete GO:0015393)","synonyms":[{"name":"uracil/uridine permease activity","type":"exact"}],"termid":"GO:0015393"}


id: GO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C2 complex (obsolete GO:0005603)","synonyms":[{"name":"complement component C2 complex","type":"exact"}],"termid":"GO:0005603"}


id: PBO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphate transferase subunits alpha and beta","termid":"PBO:0048846"}


id: PBO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 23","termid":"PBO:0072053"}


id: PBO:0070603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 71","termid":"PBO:0070603"}


id: GO:1903825
data:
  {"annotated_genes":["SJAG_04706","SJAG_01960","SJAG_00232","SJAG_03256","SJAG_05346","SJAG_04725","SJAG_04787","SJAG_02062","SJAG_03827","SJAG_02011","SJAG_03970","SJAG_03591","SJAG_01096","SJAG_06598","SJAG_00543","SJAG_04920","SJAG_00877","SJAG_01406","SJAG_02605","SJAG_02144","SJAG_02150","SJAG_01872","SJAG_04588","SJAG_04637","SJAG_03899","SJAG_04135","SJAG_02113","SJAG_04295","SJAG_02140","SJAG_02716","SJAG_02133","SJAG_02946","SJAG_04903","SJAG_00522","SJAG_02941","SJAG_01770","SJAG_00015","SJAG_04983","SJAG_00019","SJAG_01636","SJAG_01336","SJAG_05325","SJAG_03503","SJAG_04905","SJAG_02779","SJAG_00626","SJAG_00275","SJAG_01923","SJAG_02955","SJAG_04593","SJAG_00991","SJAG_04718","SJAG_01924","SJAG_05175","SJAG_01998","SJAG_04984","SJAG_04715","SJAG_01505","SJAG_03400","SJAG_03829","SJAG_02029","SJAG_00051","SJAG_02947","SJAG_05342","SJAG_03644","SJAG_00276","SJAG_00149","SJAG_04296","SJAG_01994","SJAG_04957","SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[95549,74798,78520,99007,113445,113637,113443,113444,76453,78692,113442,78836,75759,113449,72918,113446,75860,76606,74678,113447,113448,75502,77486,85434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003333"},{"annotations":[105398,98289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[92144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015810"},{"annotations":[86112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[99512,99510,91305,99511,99509,92922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[87718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[58265,69202,69430,83251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905039"},{"annotations":[114176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[87719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[73412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904947"},{"annotations":[88137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[95762,93791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[98290,105399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[91626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[95884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[92937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[99319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[94378,63371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[92145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[92938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[95885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[98291,99323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[92939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[105400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[99325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[99326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[97173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[90631,113640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[97174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[64549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901553"},{"annotations":[92147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990551"},{"annotations":[92148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"},{"annotations":[72295,71426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"},{"annotations":[84186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[103325,76768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[84187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[90017,75954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"},{"annotations":[83872],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[72265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[75689,88968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[94257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"},{"annotations":[85651],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0035432"},{"annotations":[87405,94434,88958,105903],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[88959],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[94435,87406,88960],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[95877,96733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[86327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"},{"annotations":[97176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The process in which an organic acid is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid transport","termid":"GO:0015849"},{"relation_name":"is_a","term_name":"transmembrane 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acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903825","terms_by_termid":{"GO:0003333":null,"GO:0006843":null,"GO:0006847":null,"GO:0006850":null,"GO:0015810":null,"GO:0015813":null,"GO:0032974":null,"GO:0034488":null,"GO:0034490":null,"GO:0035432":null,"GO:0071423":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0098714":null,"GO:0098715":null,"GO:0098717":null,"GO:0098720":null,"GO:0110141":null,"GO:0140270":null,"GO:0140300":null,"GO:1901482":null,"GO:1901553":null,"GO:1902475":null,"GO:1903712":null,"GO:1903714":null,"GO:1903826":null,"GO:1904947":null,"GO:1904983":null,"GO:1905039":null,"GO:1905135":null,"GO:1905136":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1990536":null,"GO:1990550":null,"GO:1990551":null,"GO:1990555":null,"GO:1990556":null,"GO:1990575":null,"GO:1990591":null,"GO:1990818":null,"GO:1990822":null}}


id: PBO:0073172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L family member 3","termid":"PBO:0073172"}


id: SO:0001146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A site of sequence variation (alteration). Alternative sequence due to naturally occurring events such as polymorphisms and alternative splicing or experimental methods such as site directed mutagenesis.","definition_xrefs":["SO:ke","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_variation_site","secondary_identifiers":["BS:00336"],"synonyms":[{"name":"sequence_variations","type":"exact"}],"termid":"SO:0001146"}


id: PBO:0057659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1251","termid":"PBO:0057659"}


id: GO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development","termid":"GO:0061062"}


id: PBO:0063703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 2","termid":"PBO:0063703"}


id: GO:0141005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism involving heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:25247314","PMID:32823517","PMID:28951459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon silencing","termid":"GO:0010526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotransposon silencing by heterochromatin formation","termid":"GO:0141005"}


id: PR:Q10225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin repeat and BTB/POZ domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00929","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.04c","secondary_identifiers":["UniProtKB:Q10225"],"synonyms":[{"name":"Spom972h-ABTB1","type":"exact"}],"termid":"PR:Q10225"}


id: PATO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration of temperature which is lesser relative to the normal or average enduring or continuing in time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased duration","termid":"PATO:0000499"},{"relation_name":"is_a","term_name":"duration of temperature","termid":"PATO:0001310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased duration of temperature","termid":"PATO:0001311"}


id: PBO:0064558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation protein","termid":"PBO:0064558"}


id: FYPO:0006947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during glucose starvation","synonyms":[{"name":"ectopic protein localization to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalised to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose depletion","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose deprivation","type":"exact"}],"termid":"FYPO:0006947"}


id: PBO:0057137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 218-2","termid":"PBO:0057137"}


id: FYPO:0000924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of anisomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to anisomycin","synonyms":[{"name":"resistance to anisomycin during mitotic cell cycle","type":"related"},{"name":"resistance to anisomycin during vegetative growth","type":"exact"},{"name":"resistant to anisomycin","type":"exact"}],"termid":"FYPO:0000924"}


id: PBO:0046193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin","termid":"PBO:0046193"}


id: PBO:0030555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import","termid":"PBO:0030555"}


id: PBO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK9 antisense RNA 1","termid":"PBO:0045335"}


id: GO:0007489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of the differentiation of polytenized larval hypodermal cells from abdominal histoblasts. The abdominal histoblasts remain a small cluster of diploid cells among the polytenized larval hypodermal cells.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of imaginal histoblast diploidy","termid":"GO:0007489"}


id: PBO:0059991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 11","termid":"PBO:0059991"}


id: PBO:0072870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB homeobox 1","termid":"PBO:0072870"}


id: PBO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase (predicted)","termid":"PBO:0004167"}


id: PBO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch protein (predicted)","termid":"PBO:0003680"}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["PMID:10915863","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: GO:0008762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.","definition_xrefs":["EC:1.3.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramate dehydrogenase activity","secondary_identifiers":["MetaCyc:UDPNACETYLMURAMATEDEHYDROG-RXN","RHEA:12248"],"synonyms":[{"name":"MurB reductase","type":"related"},{"name":"UDP-GlcNAc-enoylpyruvate reductase activity","type":"related"},{"name":"UDP-N-acetylenolpyruvoylglucosamine reductase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-enoylpyruvate reductase activity","type":"related"},{"name":"UDP-N-acetylmuramate:NADP+ oxidoreductase activity","type":"related"},{"name":"uridine diphospho-N-acetylglucosamine-enolpyruvate reductase activity","type":"related"},{"name":"uridine diphosphoacetylpyruvoylglucosamine reductase activity","type":"related"},{"name":"uridine-5'-diphospho-N-acetyl-2-amino-2-deoxy-3-O-lactylglucose:NADP-oxidoreductase activity","type":"related"}],"termid":"GO:0008762"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADP) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADPH) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: PBO:0034508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_segregation","termid":"PBO:0034508"}


id: FYPO:0003478
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114608,114702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects signal transduction. Signal transduction is the process in which a signal is conveyed to trigger a change in the activity or state of a cell. It begins with reception of a signal and ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. A phenotype may affect one or more steps in one or more signal transduction pathways.","definition_xrefs":["GO:0007165","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"signal transduction phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"fission yeast signal transduction phenotype","type":"exact"}],"termid":"FYPO:0003478","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 113","termid":"PBO:0071111"}


id: GO:0048565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"digestive system development","termid":"GO:0055123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract development","synonyms":[{"name":"gut development","type":"broad"},{"name":"intestinal development","type":"narrow"},{"name":"intestine development","type":"narrow"}],"termid":"GO:0048565"}


id: PBO:0053860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1133","termid":"PBO:0053860"}


id: GO:0052514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont inflammatory response (obsolete GO:0052514)","synonyms":[{"name":"positive regulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052514"}


id: PBO:0029504
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_elongated_germ_tubes_(obsolete_FYPO:0002211)","termid":"PBO:0029504"}


id: PBO:0087044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L20B; homologous to mammalian ribosomal protein L18A, no bacterial homolog; RPL20B has a paralog, RPL20A, that arose from the whole genome duplication","termid":"PBO:0087044"}


id: GO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a urotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"urotensin receptor binding","synonyms":[{"name":"urotensin receptor ligand","type":"narrow"}],"termid":"GO:0031889"}


id: PBO:0086691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0086691"}


id: GO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.","definition_xrefs":["GOC:jl","PMID:8905091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"beta-ketoadipate pathway","synonyms":[{"name":"ortho-cleavage pathway","type":"broad"}],"termid":"GO:0042952"}


id: PR:Q9Y7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.04c","synonyms":[{"name":"Spom972h-set7","type":"exact"}],"termid":"PR:Q9Y7Q6"}


id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: PATO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001148 relative resistance value (obsolete PATO:0001148)","termid":"PATO:0001148"}


id: GO:0004439
data:
  {"annotated_genes":["SJAG_04545","SJAG_03375","SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73395,74426,74759],"is_not":false,"summary":null,"term":"GO:0004439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["RHEA:22764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"},{"relation_name":"is_a","term_name":"phosphatidylinositol-4,5-bisphosphate phosphatase activity","termid":"GO:0106019"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_03375":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8868648","EC:3.1.3.36","KEGG_REACTION:R04404","Reactome:R-HSA-1675824","Reactome:R-HSA-1676177","MetaCyc:PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN","GO:0001668"],"synonyms":[{"name":"PI(4,5)P2 5-phosphatase activity","type":"exact"},{"name":"PtdIns(4,5)P(2) 5-phosphatase activity","type":"related"},{"name":"PtdIns(4,5)P2 5-phosphatase activity","type":"related"},{"name":"phosphatidyl-myo-inositol-4,5-bisphosphate phosphatase activity","type":"related"},{"name":"phosphatidylinositol 4,5-bisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol-bisphosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004439","terms_by_termid":{"GO:0004439":null}}


id: MOD:00078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N(omega)-methyl-L-arginine.","definition_xrefs":["PubMed:15835918","PubMed:2426402","PubMed:11875433","PubMed:5128665","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"omega-N-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[(imino(methylamino)methyl)amino]pentanoic acid","type":"exact"},{"name":"MOD_RES Omega-N-methylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"NG-methylarginine","type":"exact"},{"name":"NoMeArg","type":"exact"},{"name":"omega-N-methyl-L-arginine","type":"exact"},{"name":"omega-N-methylated L-arginine","type":"exact"}],"termid":"MOD:00078"}


id: PBO:0049578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3-3A divergent transcript","termid":"PBO:0049578"}


id: GO:0120175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["PMID:23732470","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of torso signaling pathway","termid":"GO:0120175"}


id: GO:1905100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["PMID:26265044","GO_REF:0000058","GOC:bc","GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of apoptosome assembly","synonyms":[{"name":"regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905100"}


id: GO:0036445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a neuronal stem cell.","definition_xrefs":["CL:0000047","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic stem cell division","termid":"GO:0048103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal stem cell division","synonyms":[{"name":"NSC division","type":"exact"}],"termid":"GO:0036445"}


id: PBO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 2","termid":"PBO:0060398"}


id: PBO:0066840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 140","termid":"PBO:0066840"}


id: GO:0042851
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-alanine metabolism","type":"exact"}],"termid":"GO:0042851","terms_by_termid":{"GO:0042853":null}}


id: PR:O60125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.11c","synonyms":[{"name":"BAG-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag101","type":"exact"}],"termid":"PR:O60125"}


id: GO:2001294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"malonyl-CoA catabolic process","synonyms":[{"name":"malonyl-CoA breakdown","type":"exact"},{"name":"malonyl-CoA catabolism","type":"exact"},{"name":"malonyl-CoA degradation","type":"exact"}],"termid":"GO:2001294"}


id: PBO:0055170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2594","termid":"PBO:0055170"}


id: GO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + a quinone + H2O = a carboxylate + a quinol.","definition_xrefs":["EC:1.2.5.2","MetaCyc:1.2.99.3-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aldehyde dehydrogenase (quinone) activity","secondary_identifiers":["RHEA:13881"],"synonyms":[{"name":"aldehyde dehydrogenase (acceptor) activity","type":"related"},{"name":"aldehyde dehydrogenase (pyrroloquinoline-quinone)","type":"related"},{"name":"aldehyde:(pyrroloquinoline-quinone) oxidoreductase activity","type":"related"}],"termid":"GO:0047113"}


id: GO:1904133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in rhombomere morphogenesis.","definition_xrefs":["PMID:24892953","GOC:TermGenie","GO_REF:0000058","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in rhombomere morphogenesis","termid":"GO:1904133"}


id: PBO:0076537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 64 pseudogene","termid":"PBO:0076537"}


id: PBO:0050118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 28","termid":"PBO:0050118"}


id: GO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"peptidyl-proline 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630769"],"termid":"GO:0031544"}


id: PBO:0044997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanous related formin 3","termid":"PBO:0044997"}


id: PBO:0069853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1139, pseudogene","termid":"PBO:0069853"}


id: PBO:0029329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_modification","termid":"PBO:0029329"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: FYPO:0006933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxytoluene (dibutylhydroxytoluene; BHT) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to butylated hydroxytoluene","synonyms":[{"name":"resistance to 2,6-di-tert-butyl-4-methylphenol","type":"exact"},{"name":"resistance to BHT","type":"exact"},{"name":"resistance to butylated hydroxytoluene during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxytoluene during vegetative growth","type":"exact"},{"name":"resistance to dibutylhydroxytoluene","type":"exact"},{"name":"resistant to BHT","type":"exact"},{"name":"resistant to butylated hydroxytoluene","type":"exact"}],"termid":"FYPO:0006933"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-isomenthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["MetaCyc:RXN-5164","EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-pulegone reductase, (+)-isomenthone as substrate, activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: PBO:0090120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsr1","termid":"PBO:0090120"}


id: PR:Q9P6N5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrosphingosine 1-phosphate phosphatase C823.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.11","synonyms":[{"name":"Spom972h-sgp1","type":"exact"}],"termid":"PR:Q9P6N5"}


id: SO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous region of sequence composed of the overlapping of multiple sequence_features, which ultimately provides evidence for another sequence_feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_result_region","termid":"SO:0000703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping_feature_set","synonyms":[{"name":"overlapping feature set","type":"exact"}],"termid":"SO:0001261"}


id: PBO:0060449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear assembly factor 1 ribonucleoprotein","termid":"PBO:0060449"}


id: FYPO:0004883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is abnormal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","PomBase:mah","GO:1902967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle midzone","synonyms":[{"name":"abnormal protein localisation to mitotic spindle midzone","type":"exact"},{"name":"abnormal protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle midzone during vegetative growth","type":"exact"}],"termid":"FYPO:0004883"}


id: FYPO:0001375
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[114293],"is_not":false,"summary":null,"term":"FYPO:0001375"},{"annotations":[114654,114643,114642,114650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null,"SJAG_05207":null},"genotype_count":3,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization","references_by_uniquename":{"PMID:25866389":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta","mid1delta"],"synonyms":[{"name":"protein absent from specific location in cell","type":"related"},{"name":"protein localisation abolished","type":"exact"},{"name":"protein localization abolished","type":"exact"}],"termid":"FYPO:0001375","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001375":null,"FYPO:0007177":null}}


id: PBO:0044556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DARS1 antisense RNA 1","termid":"PBO:0044556"}


id: PBO:0090303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like-containing domain superfamily protein","termid":"PBO:0090303"}


id: PBO:0084012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, environmental stress, and entry into stationary phase; GSY1 has a paralog, GSY2, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084012"}


id: PBO:0080375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog B","termid":"PBO:0080375"}


id: PBO:0076376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta activated kinase 1 (MAP3K7) binding protein 3","termid":"PBO:0076376"}


id: FYPO:0003608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of dehydrodolichyl diphosphate synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal dehydrodolichyl diphosphate synthase activity","termid":"FYPO:0003608"}


id: RO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is ubiquitously expressed in y if and only if x is expressed in y, and the majority of cells in y express x","direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_in","termid":"RO:0002206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously_expressed_in","termid":"RO:0002291"}


id: PBO:0064020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 54","termid":"PBO:0064020"}


id: GO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-citrulline + NH3.","definition_xrefs":["EC:3.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"arginine deiminase activity","secondary_identifiers":["RHEA:19597","MetaCyc:ARGININE-DEIMINASE-RXN"],"synonyms":[{"name":"L-arginine deiminase activity","type":"related"},{"name":"L-arginine iminohydrolase activity","type":"related"},{"name":"arginine dihydrolase activity","type":"related"},{"name":"citrulline iminase activity","type":"related"}],"termid":"GO:0016990"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: GO:1903752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18681888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901300"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"activation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"activation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"activation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"positive regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"positive regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"up regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"up-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"up-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"upregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"upregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903752"}


id: FYPO:0007730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007730"}


id: GO:0008843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, endochitinases cleave randomly within the chitin chain.","definition_xrefs":["GOC:pde","PMID:11468293","GOC:kah","EC:3.2.1.-","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"endochitinase activity","termid":"GO:0008843"}


id: FYPO:0007812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to stavudine. Cells stop growing (and may die) at a concentration of stavudine that allows wild type cells to grow.","definition_xrefs":["PMID:34108240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to stavudine","synonyms":[{"name":"hypersensitive to stavudine","type":"exact"},{"name":"sensitive to stavudine during mitotic cell cycle","type":"related"},{"name":"sensitive to stavudine during vegetative growth","type":"exact"}],"termid":"FYPO:0007812"}


id: FYPO:0006198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, has two nuclei, and has normal length but a greater diameter than normal.","definition_xrefs":["PMID:20805322","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000257","FYPO:0000005","FYPO:0000002","FYPO:0001312","FYPO:0000004"],"is_obsolete":false,"name":"inviable binucleate vegetative cell, with normal cell length and increased cell diameter","synonyms":[{"name":"inviable binucleate cell, with normal cell length and increased cell diameter, during vegetative growth","type":"exact"},{"name":"inviable binucleate vegetative cell, with increased cell diameter and normal cell length","type":"exact"},{"name":"inviable binucleate vegetative cell, with normal cell length and increased cell diameter during mitotic cell cycle","type":"related"},{"name":"inviable binucleate vegetative cell, with normal length and increased diameter","type":"exact"},{"name":"inviable swollen binucleate vegetative cell, with normal cell length","type":"related"},{"name":"lethal; binucleate vegetative cell, with normal cell length and increased cell diameter","type":"exact"}],"termid":"FYPO:0006198"}


id: GO:0009165
data:
  {"annotated_genes":["SJAG_05277","SJAG_MIT15","SJAG_02038","SJAG_01139","SJAG_04487","SJAG_01500","SJAG_03708","SJAG_01582","SJAG_00133","SJAG_04845","SJAG_03114","SJAG_04007","SJAG_00957","SJAG_03811","SJAG_02887","SJAG_04970","SJAG_04354","SJAG_04709","SJAG_04467","SJAG_00197","SJAG_00412","SJAG_00964","SJAG_04693","SJAG_00779","SJAG_04156","SJAG_04882","SJAG_MIT09","SJAG_04422","SJAG_02618","SJAG_MIT37","SJAG_00444","SJAG_02598","SJAG_05204","SJAG_01471","SJAG_04288","SJAG_02158","SJAG_03313","SJAG_04681","SJAG_02874","SJAG_00836","SJAG_01937","SJAG_00982","SJAG_03946","SJAG_00915","SJAG_02105","SJAG_01126","SJAG_04713","SJAG_01566","SJAG_02364","SJAG_05024","SJAG_01352","SJAG_00438","SJAG_03925","SJAG_07003","SJAG_04657","SJAG_00427","SJAG_04122","SJAG_02006","SJAG_01359","SJAG_02889","SJAG_04123","SJAG_03140","SJAG_00866","SJAG_01661","SJAG_00985","SJAG_03164","SJAG_00542","SJAG_00533","SJAG_03771","SJAG_03298","SJAG_03355","SJAG_01402","SJAG_01859","SJAG_02564","SJAG_03731","SJAG_02741","SJAG_04634","SJAG_01081","SJAG_04849","SJAG_00694","SJAG_00885","SJAG_02850","SJAG_04665","SJAG_01814","SJAG_03064","SJAG_01070","SJAG_00044","SJAG_03290","SJAG_02948","SJAG_04627","SJAG_06634","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77575,75946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[83578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[71399,70135,93379,95098,76022,109808,105616,98901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[111971,89050,107255,85190,94061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[71771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[88885,93943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[111365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[112289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[72469,74060,83218,77803,94586,73024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[93696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[112088,73469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[78873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[77385,85117,71169,71509,78751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[95596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110204,88602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88087,91092,102680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[92588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"},{"annotations":[70982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[103787,78320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[70983,85119,88089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[77971,103788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[77480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[72410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[59226,74039,103682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[74810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[74197,97736,95597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[97317,74811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[102892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[93923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[86762,70921,108415,86359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[76410,74175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[78441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[78421,71098,76869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[84771,86360,105005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[67428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[90453,97320,104189,114224,99138,88908,111110,100451,103232,89505,114229,84878,88494,98522,103320,99167,114233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[72220,73381,93286,100249,107748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[113211],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[78877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[88603,84225,110206,87632,83256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[71711,71197,95598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"},{"annotations":[74812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The 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synthesis","type":"exact"}],"termid":"GO:0009165","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006164":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006741":null,"GO:0006747":null,"GO:0009224":null,"GO:0009265":null,"GO:0009398":null,"GO:0009435":null,"GO:0015937":null,"GO:0015966":null,"GO:0015986":null,"GO:0019358":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0034356":null,"GO:0035338":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: PBO:0014276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIBoflavin","termid":"PBO:0014276"}


id: PBO:0060038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 26","termid":"PBO:0060038"}


id: FYPO:0006627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4,5-bisphosphate measured in the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphatidylinositol level","termid":"FYPO:0001507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane","synonyms":[{"name":"normal 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate level in plasma membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in cell membrane","type":"exact"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal phosphatidylinositol-4,5-bisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"normal plasma membrane PI(4,5)P2 level","type":"exact"},{"name":"normal plasma membrane phosphatidylinositol-4,5-bisphosphate level","type":"exact"}],"termid":"FYPO:0006627"}


id: PBO:0070387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1B","termid":"PBO:0070387"}


id: PATO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight angle to","termid":"PATO:0001322"}


id: GO:0034897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(1-ethyl-1,4-dimethyl-pentyl)phenol + O2 + 2 H+ + 2 e- = hydroquinone + 3,6-dimethylheptan-3-ol.","definition_xrefs":["UM-BBD_reactionID:r1358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-(1-ethyl-1,4-dimethyl-pentyl)phenol monooxygenase activity","termid":"GO:0034897"}


id: PBO:0042872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 107","termid":"PBO:0042872"}


id: GO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H2O + NAD+ = 3-hydroxypyruvate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.7","MetaCyc:SERINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine 2-dehydrogenase activity","secondary_identifiers":["RHEA:20884"],"synonyms":[{"name":"L-serine:NAD oxidoreductase (deaminating) activity","type":"related"},{"name":"L-serine:NAD+ 2-oxidoreductase (deaminating)","type":"related"},{"name":"serine dehydrogenase activity","type":"exact"}],"termid":"GO:0050282"}


id: GO:0006873
data:
  {"annotated_genes":["SJAG_00792","SJAG_01669","SJAG_03879","SJAG_03516","SJAG_00963","SJAG_04975","SJAG_02834","SJAG_01445","SJAG_04032","SJAG_01078","SJAG_01353","SJAG_04403","SJAG_01435","SJAG_01004","SJAG_02470","SJAG_01803","SJAG_02716","SJAG_00532","SJAG_03528","SJAG_01397","SJAG_04260","SJAG_00136","SJAG_01913","SJAG_02474","SJAG_00299","SJAG_00668","SJAG_02883","SJAG_04584","SJAG_04743","SJAG_02023","SJAG_02532","SJAG_04616","SJAG_02080","SJAG_04031","SJAG_04955","SJAG_04677","SJAG_00328","SJAG_02399","SJAG_00301","SJAG_01007","SJAG_04096","SJAG_04607","SJAG_01129","SJAG_02457","SJAG_03631","SJAG_02578","SJAG_02847","SJAG_04258","SJAG_05294","SJAG_01990","SJAG_03793","SJAG_04698","SJAG_04760","SJAG_04675","SJAG_01817","SJAG_00822","SJAG_03862","SJAG_04028","SJAG_03866","SJAG_04111","SJAG_00516","SJAG_00212","SJAG_00222","SJAG_02019","SJAG_00802","SJAG_00923","SJAG_01400","SJAG_01694","SJAG_04757","SJAG_02735","SJAG_03850","SJAG_04867","SJAG_04167","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89739,99272,89731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[70691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[77154,93680,73060,78721,78787,73334,71049,74491,108680,113758,70419,72239,71526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[89405,89404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006877"},{"annotations":[103274,88764,95678,74397,76951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[109194,99742,71151,74398,76952,73750,74274,77041,87957,89696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[70354,73924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[70426,95749,73192,74913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[59350,97473,89065,109109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030003"},{"annotations":[70626,77191,72190,91041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[73194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[99054,90337,99795,95679,72538,89407,109641,89406,74049,73721,77178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[88102,88099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[108120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[96027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[70800,76741,72861,71487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[106142,106143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[72366,91259,95539,78733,83820,72707,97156,99399,77342,71023,73518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic ions within a cell. 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id: PBO:0038462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 2","termid":"PBO:0038462"}


id: PBO:0039384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 1A","termid":"PBO:0039384"}


id: MOD:00602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated residue","synonyms":[{"name":"NMeRes","type":"exact"}],"termid":"MOD:00602"}


id: FYPO:0005687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable equatorial microtubule organizing center (eMTOC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"eMTOC absent from cell","synonyms":[{"name":"absent eMTOC","type":"exact"},{"name":"eMTOC absent from cell during mitotic cell cycle","type":"related"},{"name":"eMTOC absent from cell during vegetative growth","type":"exact"},{"name":"equatorial microtubule organizing center absent from cell","type":"exact"}],"termid":"FYPO:0005687"}


id: GO:2000217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"regulation of colony morphology","type":"related"}],"termid":"GO:2000217"}


id: PR:O42647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug94 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 94 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.07c","synonyms":[{"name":"Spom972h-mug94","type":"exact"}],"termid":"PR:O42647"}


id: FYPO:0003706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing K-252a.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on K-252a","synonyms":[{"name":"normal cell population growth in presence of K-252a","type":"exact"},{"name":"normal cell population growth on K-252a","type":"exact"},{"name":"normal cellular response to K-252a","type":"related"},{"name":"normal vegetative cell population growth on K-252a","type":"exact"}],"termid":"FYPO:0003706"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: PBO:0059667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 33","termid":"PBO:0059667"}


id: PBO:0038958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIRF antisense RNA 1","termid":"PBO:0038958"}


id: PBO:0034619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biological_process","termid":"PBO:0034619"}


id: PATO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased contractility","synonyms":[{"name":"low contractility","type":"exact"}],"termid":"PATO:0001581"}


id: GO:0043046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine that contributes to the establishment of DNA methylation patterns in the gamete.","definition_xrefs":["GOC:go_curators","PMID:12138111"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation involved in gamete generation (obsolete GO:0043046)","synonyms":[{"name":"de novo DNA methylation","type":"related"}],"termid":"GO:0043046"}


id: PBO:0060606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2","termid":"PBO:0060606"}


id: RO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","termid":"RO:0002305"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: PR:P30316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc6 gene.","definition_xrefs":["UniProtKB:P30316","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.04","synonyms":[{"name":"DNA polymerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc6","type":"exact"}],"termid":"PR:P30316"}


id: PBO:0058338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4712","termid":"PBO:0058338"}


id: GO:1904709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:19208546","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"negatively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell apoptotic process","synonyms":[{"name":"down regulation of granulosa cell apoptosis","type":"narrow"},{"name":"down regulation of granulosa cell apoptotic process","type":"exact"},{"name":"down regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"down regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"down-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"down-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"down-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"down-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"downregulation of granulosa cell apoptosis","type":"narrow"},{"name":"downregulation of granulosa cell apoptotic process","type":"exact"},{"name":"downregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"downregulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"inhibition of granulosa cell apoptosis","type":"narrow"},{"name":"inhibition of granulosa cell apoptotic process","type":"narrow"},{"name":"inhibition of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"inhibition of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"negative regulation of granulosa cell apoptosis","type":"narrow"},{"name":"negative regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"negative regulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904709"}


id: PBO:0046343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 1","termid":"PBO:0046343"}


id: GO:0016622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.2.2.-"],"termid":"GO:0016622"}


id: GO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of basidiospore formation","termid":"GO:0075302"},{"relation_name":"positively_regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of basidiospore formation","termid":"GO:0075303"}


id: SO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000115 transcript_feature (obsolete SO:0000115)","termid":"SO:0000115"}


id: PBO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by mammalian rab5","termid":"PBO:0001716"}


id: GO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + 3-hydroxy-2-methylpyridine-5-carboxylate = NADP+ + 2-(acetamidomethylene)succinate.","definition_xrefs":["EC:1.14.13.242","MetaCyc:1.14.12.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridinecarboxylate dioxygenase activity","secondary_identifiers":["RHEA:10864"],"synonyms":[{"name":"2-methyl-3-hydroxypyridine 5-carboxylic acid dioxygenase activity","type":"related"},{"name":"3-hydroxy-2-methylpyridine-5-carboxylate,NADPH:oxygen oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxy-3-methylpyridinecarboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridine carboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridinecarboxylate oxidase activity","type":"related"}],"termid":"GO:0047081"}


id: _global:device_utilizes_material
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"device_utilizes_material","secondary_identifiers":["RO:0017001"],"synonyms":[{"name":"utilizes","type":"broad"}],"termid":"_global:device_utilizes_material"}


id: SO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_N6_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_N6_dimethyladenosine","secondary_identifiers":["RNAMOD:080"],"synonyms":[{"name":"N6,N6-dimethyladenosine","type":"exact"},{"name":"m62A","type":"exact"}],"termid":"SO:0001311"}


id: PBO:0081122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3H1-type containing","termid":"PBO:0081122"}


id: GO:0000448
data:
  {"annotated_genes":["SJAG_02275","SJAG_02374","SJAG_03789","SJAG_01581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71439,87364,90564,99602],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


id: PBO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 4","termid":"PBO:0060798"}


id: PBO:0086289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in determining mitochondrial architecture; inner membrane protein that interacts physically and genetically with the MICOS complex and is required for its integrity","termid":"PBO:0086289"}


id: GO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a carboxy group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein carboxylation","synonyms":[{"name":"protein amino acid carboxylation","type":"exact"}],"termid":"GO:0018214"}


id: GO:0036090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Advancement of the cleavage furrow from the outside of the cell inward towards the center of the cell. The cleavage furrow acts as a 'purse string' which draws tight to separate daughter cells during cytokinesis and partition the cytoplasm between the two daughter cells. The furrow ingresses until a cytoplasmic bridge is formed.","definition_xrefs":["PMID:20687468","PMID:15811947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"cleavage furrow ingression","synonyms":[{"name":"cleavage furrow contraction","type":"exact"}],"termid":"GO:0036090"}


id: PBO:0068000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 302","termid":"PBO:0068000"}


id: SO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is invalidated due to partial processing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_partial_processing","synonyms":[{"name":"invalidated by partial processing","type":"exact"}],"termid":"SO:0000416"}


id: GO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that begins with the production and formation of structures and molecules in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from host","termid":"GO:0044002"}


id: PBO:0070163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 77 pseudogene","termid":"PBO:0070163"}


id: PBO:0064755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 91","termid":"PBO:0064755"}


id: PBO:0108967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIMAP1 family member D","termid":"PBO:0108967"}


id: GO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-isoleucine amide by hydrolysis and oxidation of an interior Ile-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0090"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-isoleucine amidation (obsolete GO:0018043)","termid":"GO:0018043"}


id: PATO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female pseudohermaphrodite","termid":"PATO:0001829"}


id: PR:Q9P7Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl9 gene.","definition_xrefs":["UniProtKB:Q9P7Q2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C186.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.01","synonyms":[{"name":"Spom972h-pfl9","type":"exact"}],"termid":"PR:Q9P7Q2"}


id: GO:0051892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"negatively_regulates","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast differentiation","synonyms":[{"name":"down regulation of cardioblast differentiation","type":"exact"},{"name":"down-regulation of cardioblast differentiation","type":"exact"},{"name":"downregulation of cardioblast differentiation","type":"exact"},{"name":"inhibition of cardioblast differentiation","type":"narrow"}],"termid":"GO:0051892"}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: PBO:0081194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein interacting with K protein 1","termid":"PBO:0081194"}


id: GO:0009678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + H+(in) + H2O = 2 H+(out) + 2 phosphate.","definition_xrefs":["GOC:mtg_transport","Wikipedia:Proton-pumping_pyrophosphatase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"diphosphate hydrolysis-driven proton transmembrane transporter activity","secondary_identifiers":["TC:3.A.10","MetaCyc:TRANS-RXN-370","EC:7.1.3.1","RHEA:13973"],"synonyms":[{"name":"H+-exporting diphosphatase","type":"related"},{"name":"PP(i) hydrolysis-driven proton transmembrane transporter activity","type":"exact"},{"name":"hydrogen-translocating pyrophosphatase activity","type":"related"},{"name":"proton-pumping diphosphatase","type":"related"},{"name":"proton-pumping pyrophosphatase","type":"related"},{"name":"proton-translocating pyrophosphatase activity","type":"exact"},{"name":"pyrophosphate hydrolysis-driven proton transmembrane transporter activity","type":"related"}],"termid":"GO:0009678"}


id: PR:Q9USU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas2 gene.","definition_xrefs":["UniProtKB:Q9USU5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.08","synonyms":[{"name":"Spom972h-gas2","type":"exact"}],"termid":"PR:Q9USU5"}


id: GO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["PMID:10970777","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(5'-nucleosidyl) oligophosphate metabolic process","termid":"GO:0015956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate biosynthetic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate anabolism","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate biosynthesis","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate formation","type":"exact"},{"name":"bis(5'-nucleosidyl) oligophosphate synthesis","type":"exact"}],"termid":"GO:0015957"}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: PBO:0089140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp2","termid":"PBO:0089140"}


id: PBO:0080281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 44 pseudogene","termid":"PBO:0080281"}


id: GO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of bile acid biosynthetic process","synonyms":[{"name":"regulation of bile acid anabolism","type":"exact"},{"name":"regulation of bile acid biosynthesis","type":"exact"},{"name":"regulation of bile acid formation","type":"exact"},{"name":"regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070857"}


id: GO:0140210
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297","SJAG_03540","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95912,99392,103677,113847],"is_not":false,"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to the kinetochore along a microtubule.","definition_xrefs":["PMID:25472718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transport along microtubule to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140210","terms_by_termid":{"GO:0140210":null}}


id: PR:O94325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 1 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10130:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.07","secondary_identifiers":["UniProtKB:O94325"],"synonyms":[{"name":"PTS1 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PTS1R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC725.07","type":"related"},{"name":"Spom972h-PEX5","type":"exact"},{"name":"peroxin-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94325"}


id: PBO:0057390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-1","termid":"PBO:0057390"}


id: PBO:0085204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer membrane component of the mitochondrial fusion machinery; binds to Fzo1p and Mgm1p to link these two GTPases during mitochondrial fusion; involved in fusion of both the outer and inner membranes; facilitates dimerization of Fzo1p during fusion; import into the outer membrane is mediated by Tom70p and Mim1p; has similarity to carrier proteins but likely not a transporter; similar to human SLC25A46 implicated in optic atroprophy spectrum disorder and Leigh syndrome","termid":"PBO:0085204"}


id: PBO:0091930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR-proximal","termid":"PBO:0091930"}


id: RO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially aligned with if a significant portion bases of x and y correspond in terms of their base type and their relative ordering","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_sequentially_aligned_with","termid":"RO:0002521"}


id: PBO:0052335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012 antisense RNA 1","termid":"PBO:0052335"}


id: PBO:0070258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 3, pseudogene","termid":"PBO:0070258"}


id: PBO:0029934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029934"}


id: FYPO:0004271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell septum edging catabolic process","synonyms":[{"name":"normal cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"normal cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"normal cell septum edging catabolism","type":"exact"},{"name":"normal cell septum edging hydrolysis","type":"exact"}],"termid":"FYPO:0004271"}


id: GO:0035285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of an appendage, an organ or part that is attached to the main body of an organism, into a series of semi-repetitive parts or segments. Most arthropod appendages, such as the legs and antennae, are visibly segmented.","definition_xrefs":["PMID:10357895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"appendage morphogenesis","termid":"GO:0035107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage segmentation","termid":"GO:0035285"}


id: GO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["PMID:18334669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclopentenone","termid":"GO:0010583"}


id: GO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"macrophage differentiation","termid":"GO:0030225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage differentiation","termid":"GO:0045649"}


id: GO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall cellulose (obsolete GO:0052355)","termid":"GO:0052355"}


id: PBO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip","termid":"PBO:0030082"}


id: FYPO:0004364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a dioxygenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal dioxygenase activity","termid":"FYPO:0004364"}


id: PBO:0028723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actomyosin_contractile_ring","termid":"PBO:0028723"}


id: PBO:0068743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 6, pseudogene","termid":"PBO:0068743"}


id: MOD:00156
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to an L-2',4',5'-topaquinone.","definition_xrefs":["PubMed:10387067","Unimod:392#Y","RESID:AA0147","PubMed:2111581","PubMed:1569055","ChEBI:21187","PubMed:1457410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2',4',5'-topaquinone","synonyms":[{"name":"(2S)-2-amino-3-(5-hydroxy-2,5-cyclohexadien-1,4-dion-2-yl)propanoic acid","type":"exact"},{"name":"2,4,5-trihydroxyphenylalanine quinone","type":"exact"},{"name":"5-(2-carboxy-2-aminoethyl)-2-hydroxy-1,4-benzoquinone","type":"exact"},{"name":"L-2',4',5'-topaquinone","type":"exact"},{"name":"L-2,4,5-TOPAquinone","type":"exact"},{"name":"MOD_RES 2',4',5'-topaquinone","type":"exact"},{"name":"Quinone","type":"related"},{"name":"TPQ","type":"exact"},{"name":"TopaQ","type":"exact"},{"name":"quinone","type":"related"}],"termid":"MOD:00156"}


id: PBO:0004470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18","termid":"PBO:0004470"}


id: PBO:0085633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in GPI anchor synthesis; multimembrane-spanning protein that localizes to the endoplasmic reticulum; highly conserved among eukaryotes; GPI stands for glycosylphosphatidylinositol","termid":"PBO:0085633"}


id: GO:0051294
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112186,92560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process that set the alignment of spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"part_of","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007163","GO:0000226","GO:0051179","GO:0007010"],"is_obsolete":false,"name":"establishment of spindle orientation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"orienting of spindle","type":"exact"},{"name":"spindle orientation","type":"exact"}],"termid":"GO:0051294","terms_by_termid":{"GO:0000132":null}}


id: MOD:02030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively specifies the boundary conformation of two adjacent source amino acid residues, the second (C-term side) being a L-proline, where the carbonyl group of the amide bond of the N-side of the L-proline is positioned such that the organodiyl group is in the trans orientation (omega=180)","definition_xrefs":["PubMed:5485910","ChEBI:83834","PubMed:15311922","PubMed:15735342","PubMed:24116866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-peptidyl-L-proline","termid":"MOD:02030"}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: GO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte development","termid":"GO:0048599"}


id: PBO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug95","termid":"PBO:0016975"}


id: PBO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting","termid":"PBO:0031545"}


id: PBO:0058674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6802","termid":"PBO:0058674"}


id: GO:0072035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell adhesion process in which mesenchyme cells adhere to one another in the initial stages of the formation of the pre-tubular aggregate, the earliest recognizable structure of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"pre-tubular aggregate formation","synonyms":[{"name":"mesenchymal cell condensation involved in renal vesicle formation","type":"exact"},{"name":"nephron epithelium formation","type":"related"}],"termid":"GO:0072035"}


id: PBO:0075640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 5","termid":"PBO:0075640"}


id: MOD:00351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-1-(phosphatidyl)ethanolamine.","definition_xrefs":["PubMed:11100732","RESID:AA0346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycyl-1-(phosphatidyl)ethanolamine","synonyms":[{"name":"(R)-1-hexadecanoyloxy-2-((Z)-9-octadecenoyloxy)-3-[2-(aminoacetylamino)ethyloxyphospho]propane","type":"exact"},{"name":"LIPID Phosphatidylethanolamine amidated glycine","type":"exact"},{"name":"N-glycyl-1-(phosphatidyl)ethanolamine","type":"exact"},{"name":"N-glycyl-1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine","type":"exact"}],"termid":"MOD:00351"}


id: GO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming second","secondary_identifiers":["GO:0010003","GO:0048276"],"synonyms":[{"name":"deuterostomic gastrulation","type":"exact"}],"termid":"GO:0001702"}


id: GO:0052909
data:
  {"annotated_genes":["SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104494],"is_not":false,"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 S-adenosyl-L-methionine + adenine(1779)/adenine(1780) in 18S rRNA = 4 S-adenosyl-L-homocysteine + N(6)-dimethyladenine(1779)/N(6)-dimethyladenine(1780) in 18S rRNA.","definition_xrefs":["RHEA:42780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","termid":"GO:0000179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-11634","EC:2.1.1.183"],"synonyms":[{"name":"M(6)(2)A dimethylase activity","type":"broad"}],"termid":"GO:0052909","terms_by_termid":{"GO:0052909":null}}


id: GO:0015870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"acetate ester transport","termid":"GO:1901374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acetylcholine transport","termid":"GO:0015870"}


id: FYPO:0007787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the meiotic cell cycle is arrested at the G2/MI phase transition. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah","PMID:28476936","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"increased transcription during abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"}],"termid":"FYPO:0007787"}


id: GO:1904152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:18555783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein exit from endoplasmic reticulum","termid":"GO:0070861"},{"relation_name":"regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"regulation of protein dislocation from ER","type":"exact"},{"name":"regulation of protein retrotranslocation from ER","type":"exact"},{"name":"regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904152"}


id: GO:0034052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the hypersensitive response in a plant.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type hypersensitive response","termid":"GO:0010363"},{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plant-type hypersensitive response","synonyms":[{"name":"activation of plant-type hypersensitive response","type":"narrow"},{"name":"positive regulation of HR","type":"exact"},{"name":"positive regulation of HR-PCD","type":"related"},{"name":"positive regulation of plant hypersensitive response","type":"exact"},{"name":"stimulation of plant-type hypersensitive response","type":"narrow"},{"name":"up regulation of plant-type hypersensitive response","type":"exact"},{"name":"up-regulation of plant-type hypersensitive response","type":"exact"},{"name":"upregulation of plant-type hypersensitive response","type":"exact"}],"termid":"GO:0034052"}


id: GO:1905150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GO_REF:0000059","PMID:24198377","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of voltage-gated sodium channel activity","synonyms":[{"name":"regulation of voltage gated sodium channel activity","type":"exact"},{"name":"regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905150"}


id: GO:0097680
data:
  {"annotated_genes":["SJAG_02527","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109208,111591],"is_not":false,"summary":null,"term":"GO:0097680"}]},"cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that requires a number of factors important for V(D)J recombination, including the KU70/80 heterodimer (KU), XRCC4, ligase IV, and DNA-PKcs in mammals. It does not produce translocations (as opposed to the alternative nonhomologous end joining).","definition_xrefs":["GOC:rph","PMID:18584027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair via classical nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-NHEJ","type":"related"},{"name":"canonical nonhomologous end joining","type":"exact"}],"termid":"GO:0097680","terms_by_termid":{"GO:0097680":null}}


id: PBO:0039575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 3","termid":"PBO:0039575"}


id: PBO:0109195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, DNA-repair associated protein, Srr1","termid":"PBO:0109195"}


id: GO:0102985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oleoyl-CoA + O2 + a reduced electron acceptor = linoleoyl-CoA + 2 H2O + an oxidized electron acceptor. This microsomal enzyme introduces a cis double bond at position 12 of fatty-acyl-CoAs that contain a cis double bond at position 9.","definition_xrefs":["RHEA:25856","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"delta12-fatty-acid desaturase activity","secondary_identifiers":["MetaCyc:RXN-9601","EC:1.14.19.6"],"termid":"GO:0102985"}


id: GO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that set the alignment of meiotic spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle orientation","termid":"GO:0051294"},{"relation_name":"is_a","term_name":"establishment of meiotic spindle localization","termid":"GO:0051295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0051179","GO:0007010","GO:0007049","GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of meiotic spindle orientation","synonyms":[{"name":"establishment of spindle orientation during meiosis","type":"related"},{"name":"establishment of spindle orientation involved in meiotic cell cycle","type":"exact"},{"name":"meiotic spindle orientation","type":"exact"},{"name":"orienting of meiotic spindle","type":"exact"}],"termid":"GO:0051296"}


id: PBO:0016557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub3 (predicted)","termid":"PBO:0016557"}


id: PR:O14078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.13c","synonyms":[{"name":"OLA1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPACUNK4.13c","type":"exact"}],"termid":"PR:O14078"}


id: PBO:0079791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A12, pseudogene","termid":"PBO:0079791"}


id: GO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"}


id: PBO:0071484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 25","termid":"PBO:0071484"}


id: GO:0034467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an esterosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"esterosome lumen","termid":"GO:0034467"}


id: PBO:0013824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m7G(5')pppN diphosphatase Nhm1","termid":"PBO:0013824"}


id: SO:1000185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant effect, causing an intron to be gained by the processed transcript; usually a result of a donor acceptor mutation (SO:1000072).","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000185 sequence_variant_causes_intron_gain (obsolete SO:1000185)","synonyms":[{"name":"mutation causes intron gain","type":"related"},{"name":"sequence variant causes intron gain","type":"exact"}],"termid":"SO:1000185"}


id: PBO:0087938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational repressor;  involved in polar growth, wall integrity, autodiploidization; regulated by Cbk1p phosphorylation to affect bud-specific translational control and localization of specific mRNAs; binds 5'UTRs of mRNAs encoding cell wall proteins; recognizes CNYTCNYT motif in RNA; interacts with TOR pathway components; nucleocytoplasmic shuttling appears to be critical to Ssd1p function; W303 lacks a functional SSD1 gene product; pseudonuclease descended from Dis3L2-family nucleases","termid":"PBO:0087938"}


id: GO:0072289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric nephron tubule from unspecified parts. A metanephric nephron tubule is an epithelial tube that is part of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule formation","termid":"GO:0072079"},{"relation_name":"is_a","term_name":"metanephric tubule formation","termid":"GO:0072174"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule formation","termid":"GO:0072289"}


id: PBO:0051915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 binding protein 2","termid":"PBO:0051915"}


id: FYPO:0003732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable respiratory chain complex IV in the mitochondria.","definition_xrefs":["PomBase:mah","PMID:16911509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV absent from cell","synonyms":[{"name":"absent mitochondrial respiratory chain complex IV","type":"exact"},{"name":"mitochondrial respiratory chain complex IV absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondrial respiratory chain complex IV absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003732"}


id: SOFP:sp_status
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sp_status","termid":"SOFP:sp_status"}


id: PBO:0068935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 178, pseudogene","termid":"PBO:0068935"}


id: PBO:0004384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatasePtn1","termid":"PBO:0004384"}


id: PBO:0108605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_characteristic","termid":"PBO:0108605"}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: MOD:01850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["RESID:AA0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01850"}


id: GO:0110003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tRNA C5-cytosine methylation.","definition_xrefs":["GOC:vw","PMID:23074192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tRNA methylation","termid":"GO:0110002"},{"relation_name":"regulates","term_name":"tRNA C5-cytosine methylation","termid":"GO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"regulation of tRNA C5-cytosine methylation","termid":"GO:0110003"}


id: PBO:0086835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to Pip2p; an oleate-specific transcriptional activator of peroxisome proliferation; YLL054C is not an essential gene","termid":"PBO:0086835"}


id: FYECO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ions","termid":"FYECO:0000030"}


id: PBO:0069842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1128, pseudogene","termid":"PBO:0069842"}


id: PBO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helix-Extension-Helix domain protein","termid":"PBO:0001431"}


id: PR:O59715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid delta(4)-desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.07c","synonyms":[{"name":"Spom972h-dsd1","type":"exact"},{"name":"delta 4-(E)-sphingolipid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dihydroceramide desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59715"}


id: PBO:0065114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCH antisense RNA 1","termid":"PBO:0065114"}


id: SO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_loop","synonyms":[{"name":"miRNA loop","type":"exact"}],"termid":"SO:0001246"}


id: PBO:0082901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin partner of the cyclin-dependent kinase (CDK) Kin28p; regulates the activity of Kin28p, a TFIIH-associated carboxy-terminal domain (CTD) kinase that facilitates recruitment of mRNA 5'-capping and polyadenylation factors to the RNAPII holoenzyme complex, and has a minor role in RNAPII transcription; subunit of TFIIK, a TFIIH subassembly;  human homolog CCNH allows growth of a yeast ccl1 temperature-sensitive mutant at restrictive temperature","termid":"PBO:0082901"}


id: PBO:0067848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 150","termid":"PBO:0067848"}


id: GO:0038110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-2 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-2","termid":"GO:0071352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-2-mediated signaling pathway","synonyms":[{"name":"IL-2-mediated signaling pathway","type":"exact"},{"name":"interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:0038110"}


id: GO:0010345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of suberin monomers and suberin polyesters. Suberin monomers are derived from fatty acids and trans-cinnamic acids. The monomers are then cross-linked with glycerols.","definition_xrefs":["PMID:17259262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"suberin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1121"],"termid":"GO:0010345"}


id: PBO:0027465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_thickness_at_old_end_during_vegetative_growth","termid":"PBO:0027465"}


id: PBO:0030074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asparagine_import","termid":"PBO:0030074"}


id: PBO:0085228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of evolutionarily-conserved CCR4-NOT regulatory complex; contains single ABC-type ATPase domain but no transmembrane domain; interacts with several subunits of Mediator","termid":"PBO:0085228"}


id: PBO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KISS1 receptor","termid":"PBO:0052426"}


id: GO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide biosynthetic process","termid":"GO:0046476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucosylceramide biosynthetic process","synonyms":[{"name":"glucosylceramide anabolism","type":"exact"},{"name":"glucosylceramide biosynthesis","type":"exact"},{"name":"glucosylceramide formation","type":"exact"},{"name":"glucosylceramide synthesis","type":"exact"}],"termid":"GO:0006679"}


id: FYECO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which uracil was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ura","synonyms":[{"name":"uracil added","type":"exact"}],"termid":"FYECO:0000225"}


id: PBO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-frameshift suppressor 3 family protein (predicted)","termid":"PBO:0001478"}


id: PBO:0074492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 3","termid":"PBO:0074492"}


id: PBO:0077804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 2","termid":"PBO:0077804"}


id: PBO:0003733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein Mdm34 (predicted)","termid":"PBO:0003733"}


id: FYECO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuCl2","synonyms":[{"name":"copper chloride added","type":"exact"}],"termid":"FYECO:0000184"}


id: PR:O74973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4B4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.12c","synonyms":[{"name":"Spom972h-SPBC4B4.12c","type":"exact"}],"termid":"PR:O74973"}


id: GO:0021868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unequal mitotic division of a forebrain radial glial cell that gives rise to a radial glial cell and a ventricular zone cell.","definition_xrefs":["GOC:jid","GOC:cls","PMID:16226447","GO_REF:0000021","GOC:dgh","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete ventricular zone cell-producing asymmetric radial glial cell division in forebrain (obsolete GO:0021868)","termid":"GO:0021868"}


id: GO:0097156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of motor neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["PMID:18403711","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of motor neuron axon","termid":"GO:0097156"}


id: GO:0006005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose biosynthetic process","termid":"GO:0042353"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"L-fucose biosynthetic process","synonyms":[{"name":"L-fucose anabolism","type":"exact"},{"name":"L-fucose biosynthesis","type":"exact"},{"name":"L-fucose formation","type":"exact"},{"name":"L-fucose synthesis","type":"exact"}],"termid":"GO:0006005"}


id: PR:Q9UUJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec24 gene.","definition_xrefs":["UniProtKB:Q9UUJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.15c","synonyms":[{"name":"Spom972h-rec24","type":"exact"},{"name":"meiotically up-regulated gene 6 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ4"}


id: PBO:0055760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA activated by TGF-beta","termid":"PBO:0055760"}


id: PBO:0030717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glucosyltransferase_activity","termid":"PBO:0030717"}


id: PBO:0045086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 4","termid":"PBO:0045086"}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: PR:P34069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P34069","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm2","termid":"PR:000025004"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.03","synonyms":[{"name":"Spom972h-mfm2","type":"exact"}],"termid":"PR:P34069"}


id: PBO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H","termid":"PBO:0042896"}


id: PBO:0110322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4 (PEL blood group)","termid":"PBO:0110322"}


id: PBO:0083531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SNX41","termid":"PBO:0083531"}


id: PBO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, mitochondrial","termid":"PBO:0061565"}


id: _global:characteristic_of_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w.","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"_global:depends_on"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"characteristic_of_part_of","secondary_identifiers":["RO:0002314"],"termid":"_global:characteristic_of_part_of"}


id: GO:0044187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small lytic vacuole that has cell cycle-independent morphology and is found in most host animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and host cell lysosomes have a great variety of morphologies and functions.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell lysosome","termid":"GO:0044187"}


id: PBO:0070376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 2 pseudogene 1","termid":"PBO:0070376"}


id: GO:0009450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid metabolic process","termid":"GO:0009448"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gamma-aminobutyric acid catabolic process","secondary_identifiers":["MetaCyc:4AMINOBUTMETAB-PWY"],"synonyms":[{"name":"4-aminobutanoate catabolic process","type":"exact"},{"name":"4-aminobutanoate catabolism","type":"exact"},{"name":"4-aminobutyrate catabolic process","type":"exact"},{"name":"4-aminobutyrate catabolism","type":"exact"},{"name":"GABA catabolic process","type":"exact"},{"name":"GABA catabolism","type":"exact"},{"name":"gamma-aminobutyric acid breakdown","type":"exact"},{"name":"gamma-aminobutyric acid catabolism","type":"exact"},{"name":"gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:0009450"}


id: PBO:0003045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltase alpha-glucosidase Mal1","termid":"PBO:0003045"}


id: GO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins and small-molecule substrates at Asn-Xaa bonds.","definition_xrefs":["EC:3.4.22.34"],"gene_count":0,"genotype_count":0,"name":"obsolete legumain activity (obsolete GO:0001509)","synonyms":[{"name":"PRSC1 gene product (Homo sapiens)","type":"related"},{"name":"asparaginyl endopeptidase activity","type":"related"},{"name":"bean endopeptidase activity","type":"related"},{"name":"citvac","type":"related"},{"name":"hemoglobinase activity","type":"related"},{"name":"legumain activity","type":"exact"},{"name":"phaseolin activity","type":"related"},{"name":"proteinase B","type":"related"},{"name":"vicilin peptidohydrolase activity","type":"related"}],"termid":"GO:0001509"}


id: PBO:0090536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt1","termid":"PBO:0090536"}


id: PBO:0067629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 801, pseudogene","termid":"PBO:0067629"}


id: GO:0034867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethylpent-2-enoyl-CoA + H2O = 2,4,4-trimethyl-3-hydroxypentanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,4,4-trimethylpent-2-enoyl-CoA hydratase activity","termid":"GO:0034867"}


id: PBO:0028991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proline_import","termid":"PBO:0028991"}


id: PBO:0003616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutathione reductase Pgr1","termid":"PBO:0003616"}


id: PR:Q09692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tryptophan--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00220","PRO:DNx","PANTHER:PTHR10055:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.13c","secondary_identifiers":["UniProtKB:Q09692"],"synonyms":[{"name":"Spom972h-WARS","type":"exact"},{"name":"TrpRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tryptophanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09692"}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: PBO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fhl1","termid":"PBO:0002155"}


id: GO:0140116
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109059],"is_not":false,"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The directed movement of fluoride ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:vw","PMID:27327046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"},{"relation_name":"is_a","term_name":"fluoride transmembrane transport","termid":"GO:1903424"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"fluoride export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140116","terms_by_termid":{"GO:0140116":null}}


id: GO:1900330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from trimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from trimethylamine","termid":"GO:1900330"}


id: GO:1900786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of naphtho-gamma-pyrone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"naphtho-gamma-pyrone catabolic process","synonyms":[{"name":"naphtho-gamma-pyrone breakdown","type":"exact"},{"name":"naphtho-gamma-pyrone catabolism","type":"exact"},{"name":"naphtho-gamma-pyrone degradation","type":"exact"},{"name":"naphtho-gamma-pyrones breakdown","type":"related"},{"name":"naphtho-gamma-pyrones catabolic process","type":"related"},{"name":"naphtho-gamma-pyrones catabolism","type":"related"},{"name":"naphtho-gamma-pyrones degradation","type":"related"}],"termid":"GO:1900786"}


id: PBO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1 (predicted)","termid":"PBO:0000748"}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: PR:O13817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec73 gene.","definition_xrefs":["UniProtKB:O13817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.01c","synonyms":[{"name":"Spom972h-sec73","type":"exact"}],"termid":"PR:O13817"}


id: GO:0002582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002582"}


id: PBO:0073239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 3","termid":"PBO:0073239"}


id: PBO:0064871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 4","termid":"PBO:0064871"}


id: GO:0007240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of Hog1 (obsolete GO:0007240)","synonyms":[{"name":"nuclear translocation of Hog1","type":"exact"}],"termid":"GO:0007240"}


id: GO:0016869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"intramolecular aminotransferase activity","secondary_identifiers":["EC:5.4.3.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring amino groups","type":"exact"}],"termid":"GO:0016869"}


id: PBO:0005843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof7","termid":"PBO:0005843"}


id: PBO:0072976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 2A member 2","termid":"PBO:0072976"}


id: PBO:0062200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily W member 1 pseudogene","termid":"PBO:0062200"}


id: PBO:0056682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEFV innate immunity regulator, pyrin","termid":"PBO:0056682"}


id: GO:1902780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22958739","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonane","termid":"GO:1902780"}


id: PBO:0062225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AU member 1","termid":"PBO:0062225"}


id: PBO:0059340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS9 antisense RNA 2","termid":"PBO:0059340"}


id: PBO:0056961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 22","termid":"PBO:0056961"}


id: PR:P79007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator hap5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.02","synonyms":[{"name":"Spom972h-php5","type":"exact"}],"termid":"PR:P79007"}


id: SO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_binding_site","synonyms":[{"name":"anchor binding site","type":"exact"}],"termid":"SO:0000977"}


id: PR:P87128
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit J that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21681:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit J (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.13c","secondary_identifiers":["UniProtKB:P87128"],"synonyms":[{"name":"Spom972h-EIF3J","type":"exact"},{"name":"eIF-3 30 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3j (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87128"}


id: GO:0090013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090013)","synonyms":[{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090013"}


id: GO:1905931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["PMID:25089138","GO_REF:0000058","GOC:rph","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905064"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905916"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905930"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"down regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"down-regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"downregulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"downregulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"inhibition of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of VSMC differentiation involved in phenotypic switching","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"inhibition of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"negative regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"negative regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905931"}


id: PBO:0073094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 3","termid":"PBO:0073094"}


id: GO:0052244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in other organism involved in symbiotic interaction (obsolete GO:0052244)","synonyms":[{"name":"negative energy taxis in other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052244"}


id: FYPO:0004967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth during nutrient starvation","termid":"FYPO:0007685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002057","FYPO:0005447"],"is_obsolete":false,"name":"increased vegetative cell population growth during phosphate starvation","synonyms":[{"name":"fast vegetative cell population growth during phosphate starvation","type":"narrow"},{"name":"increased vegetative cell population growth during phosphate depletion","type":"exact"},{"name":"increased vegetative cell population growth during phosphate deprivation","type":"exact"},{"name":"increased vegetative cell population growth during phosphate limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to phosphate starvation","type":"exact"},{"name":"resistant to phosphate starvation","type":"related"}],"termid":"FYPO:0004967"}


id: PBO:0089766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase","termid":"PBO:0089766"}


id: GO:1900816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ochratoxin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ochratoxin A metabolic process","synonyms":[{"name":"Ochratoxin A metabolism","type":"exact"}],"termid":"GO:1900816"}


id: PBO:0083777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits","termid":"PBO:0083777"}


id: PR:O94731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs8501 gene.","definition_xrefs":["UniProtKB:O94731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs85-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.19c","synonyms":[{"name":"Spom972h-trs8501","type":"exact"},{"name":"TRAPP subunit trs85-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94731"}


id: PATO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour to progress or fail to progress during it's life time.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002095 neoplasm disposition (obsolete PATO:0002095)","termid":"PATO:0002095"}


id: GO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of dividing the cytoplasm of a parent cell where a structure forms in the cytoplasm and grows until reaching the plasma membrane, thereby completely separating the cytoplasms of adjacent progeny cells. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cytokinesis by cell plate formation","termid":"GO:0000911"}


id: GO:0017168
data:
  {"annotated_genes":["SJAG_01995"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76072],"is_not":false,"summary":null,"term":"GO:0017168"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxo-L-proline + ATP + 2 H2O = L-glutamate + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:3.5.2.9","RHEA:10348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:5-oxoprolinase_(ATP-hydrolysing)","MetaCyc:5-OXOPROLINASE-ATP-HYDROLYSING-RXN","Reactome:R-HSA-1247935","KEGG_REACTION:R00251","Reactome:R-HSA-5603208"],"synonyms":[{"name":"5-OPase activity","type":"related"},{"name":"5-oxo-L-prolinase activity","type":"related"},{"name":"5-oxo-L-proline amidohydrolase (ATP-hydrolysing)","type":"related"},{"name":"5-oxoprolinase (ATP-hydrolysing)","type":"related"},{"name":"5-oxoprolinase activity","type":"related"},{"name":"L-pyroglutamate hydrolase activity","type":"related"},{"name":"oxoprolinase activity","type":"related"},{"name":"pyroglutamase (ATP-hydrolysing)","type":"related"},{"name":"pyroglutamase (ATP-hydrolyzing) activity","type":"related"},{"name":"pyroglutamase activity","type":"related"},{"name":"pyroglutamate hydrolase activity","type":"related"},{"name":"pyroglutamic hydrolase activity","type":"related"}],"termid":"GO:0017168","terms_by_termid":{"GO:0017168":null}}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: PBO:0031216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Mre11_complex_assembly","termid":"PBO:0031216"}


id: PBO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-cytochrome p450 reductase","termid":"PBO:0004092"}


id: PBO:0090685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet3","termid":"PBO:0090685"}


id: PBO:0082095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; catalyzes the second step of the pentose phosphate pathway; weak multicopy suppressor of los1-1 mutation; homologous to Sol2p and Sol1p; SOL3 has a paralog, SOL4, that arose from the whole genome duplication","termid":"PBO:0082095"}


id: PBO:0038718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 13","termid":"PBO:0038718"}


id: GO:0018754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammelide + H2O = cyanuric acid + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"ammelide aminohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8017"],"termid":"GO:0018754"}


id: PR:O59673
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp14 gene.","definition_xrefs":["UniProtKB:O59673","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit H, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.10c","synonyms":[{"name":"Spom972h-atp14","type":"exact"}],"termid":"PR:O59673"}


id: PBO:0091292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase Plb3","termid":"PBO:0091292"}


id: PBO:0058585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6718","termid":"PBO:0058585"}


id: GO:0006178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"guanine biosynthetic process","termid":"GO:0046099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanine salvage","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006178"}


id: SO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural region in an RNA molecule which promotes ribosomal frameshifting of cis coding sequence.","definition_xrefs":["RFAM:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_regulatory_frameshift_element","synonyms":[{"name":"cis regulatory frameshift element","type":"exact"}],"termid":"SO:0001427"}


id: PBO:0005271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Oca2","termid":"PBO:0005271"}


id: PATO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000063 percentage (obsolete PATO:0000063)","termid":"PATO:0000063"}


id: PBO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex assembly protein Cbp6 (predicted)","termid":"PBO:0003282"}


id: PATO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it.","definition_xrefs":["spinalstenosis:spinalstenosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herniated","termid":"PATO:0000643"}


id: PBO:0084731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; 2-oxodicarboxylate transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochondrial matrix to the cytosol for use in lysine and glutamate biosynthesis and in lysine catabolism; ODC2 has a paralog, ODC1, that arose from the whole genome duplication","termid":"PBO:0084731"}


id: PBO:0059140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 7","termid":"PBO:0059140"}


id: PBO:0041090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BR serine/threonine kinase 1","termid":"PBO:0041090"}


id: PR:O14249
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01344","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin-specific deacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.03c","secondary_identifiers":["UniProtKB:O14249"],"synonyms":[{"name":"Spom972h-ABHD4","type":"exact"}],"termid":"PR:O14249"}


id: GO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}


id: PBO:0042540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 7 pseudogene 1","termid":"PBO:0042540"}


id: PBO:0078142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 21","termid":"PBO:0078142"}


id: PBO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 30","termid":"PBO:0046588"}


id: PBO:0029761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_elongated_vegetative_cell","termid":"PBO:0029761"}


id: PBO:0057411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548m","termid":"PBO:0057411"}


id: GO:1902193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"2-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0006629","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"2-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"2-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"2-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902193"}


id: GO:0110165
data:
  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