# terms

id: GO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 3 promoter by SNAP-type and TFIIIC-type factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH-2018","PMID:12381659"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 3 promoter TFIIIB-type transcription factor activity (obsolete GO:0001029)","synonyms":[{"name":"RNA polymerase III type 3 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001029"}


id: SO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by RNA interference.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_RNA_interference","termid":"SO:0001220"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_RNA_interference","synonyms":[{"name":"RNA interference silenced gene","type":"exact"},{"name":"RNAi silenced gene","type":"exact"},{"name":"gene silenced by RNA interference","type":"exact"}],"termid":"SO:0001224"}


id: GO:0050316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + dGMP = ADP + dGDP, and ATP + dTMP = ADP + dTDP.","definition_xrefs":["EC:2.7.4.12","MetaCyc:T2-INDUCED-DEOXYNUCLEOTIDE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"T2-induced deoxynucleotide kinase activity","secondary_identifiers":["MetaCyc:GMKALT-RXN","RHEA:12697"],"synonyms":[{"name":"ATP:(d)NMP phosphotransferase activity","type":"related"}],"termid":"GO:0050316"}


id: PBO:0059131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 8","termid":"PBO:0059131"}


id: GO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.","definition_xrefs":["PMID:9566918","PMID:11124948","PMID:20631144","PMID:12829834"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation (obsolete GO:0039549)","synonyms":[{"name":"inhibition of phosphorylation-induced activation of host IRF3","type":"related"},{"name":"inhibition of virus-induced IRF-3 phosphorylation","type":"broad"}],"termid":"GO:0039549"}


id: PBO:0090296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tudor domain and nuclease, Snd1","termid":"PBO:0090296"}


id: PBO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 65","termid":"PBO:0048354"}


id: PBO:0086628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; expressed during copper starvation; YOR296W is not an essential gene","termid":"PBO:0086628"}


id: GO:0046230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine catabolic process","termid":"GO:0009310"},{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"2-aminobenzenesulfonate metabolic process","termid":"GO:0018868"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"2-aminobenzenesulfonate catabolic process","synonyms":[{"name":"2-aminobenzenesulfonate breakdown","type":"exact"},{"name":"2-aminobenzenesulfonate catabolism","type":"exact"},{"name":"2-aminobenzenesulfonate degradation","type":"exact"},{"name":"2-aminobenzenesulphonate catabolic process","type":"exact"},{"name":"2-aminobenzenesulphonate catabolism","type":"exact"}],"termid":"GO:0046230"}


id: PBO:0069652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 929, pseudogene","termid":"PBO:0069652"}


id: GO:0015507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Permease for hydroxy and aromatic amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxy/aromatic amino acid permease activity (obsolete GO:0015507)","synonyms":[{"name":"hydroxy/aromatic amino acid permease activity","type":"exact"}],"termid":"GO:0015507"}


id: GO:0000702
data:
  {"annotated_genes":["SJAG_03724","SJAG_01119","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[91745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[73739,91746,73021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"oxidized base lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000702","terms_by_termid":{"GO:0034039":null,"GO:0034042":null,"GO:0034043":null}}


id: PBO:0004096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1","termid":"PBO:0004096"}


id: GO:0072099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the ureteric bud along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in ureteric bud development","synonyms":[{"name":"ureteric bud anterior/posterior pattern formation","type":"related"}],"termid":"GO:0072099"}


id: PBO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 6, pseudogene","termid":"PBO:0050820"}


id: PBO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 6","termid":"PBO:0075194"}


id: GO:0140806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartyl-[protein] + NAD+ = 4-O-(ADP-D-ribosyl)-L-aspartyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:54424","PMID:25043379","PMID:19764761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"NAD+- protein-aspartate ADP-ribosyltransferase activity","termid":"GO:0140806"}


id: FYPO:0000398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition","synonyms":[{"name":"advanced mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: premature","type":"related"},{"name":"premature G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"premature mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S transition","type":"exact"}],"termid":"FYPO:0000398"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: GO:0071943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that consists of a heterodimer of the bHLH-ZIP proteins Myc and Max.","definition_xrefs":["GOC:cna","PMID:16620027","PMID:16620031","PMID:20170194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Myc-Max complex","termid":"GO:0071943"}


id: GO:0101023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","PMID:23201774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell proliferation","termid":"GO:0101023"}


id: GO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene-containing compound metabolic process (obsolete GO:0090420)","termid":"GO:0090420"}


id: PBO:0060855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 3","termid":"PBO:0060855"}


id: GO:0050952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of electrical stimulus","termid":"GO:0050952"}


id: GO:0070708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a cytidine nucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine insertion","synonyms":[{"name":"RNA C insertion","type":"exact"}],"termid":"GO:0070708"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: GO:0010427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to abscisic acid, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["PMID:17347412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"abscisic acid binding","synonyms":[{"name":"ABA binding","type":"related"},{"name":"abscisate binding","type":"related"}],"termid":"GO:0010427"}


id: GO:0010042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese ion","synonyms":[{"name":"response to manganese","type":"exact"}],"termid":"GO:0010042"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["GOC:dph","GOC:kmv","PMID:18329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: PATO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000449 increased percentage (obsolete PATO:0000449)","termid":"PATO:0000449"}


id: PBO:0049528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 divergent transcript","termid":"PBO:0049528"}


id: PBO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin F","termid":"PBO:0044061"}


id: PBO:0070955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 10","termid":"PBO:0070955"}


id: PBO:0049413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCY2C antisense RNA 1","termid":"PBO:0049413"}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: PBO:0074418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 17","termid":"PBO:0074418"}


id: PBO:0089309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase GH125 family Mug157","termid":"PBO:0089309"}


id: PBO:0067278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 357, pseudogene","termid":"PBO:0067278"}


id: PBO:0070837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 16","termid":"PBO:0070837"}


id: SO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where recombination or occurs during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_rearrangement_feature","termid":"SO:0000669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific_recombination_site","synonyms":[{"name":"specific recombination site","type":"exact"}],"termid":"SO:0000299"}


id: PBO:0088855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD-finger protein Cph2","termid":"PBO:0088855"}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: PBO:0058383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4755","termid":"PBO:0058383"}


id: PATO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001125 absolute pressure value (obsolete PATO:0001125)","termid":"PATO:0001125"}


id: GO:0060666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a salivary epithelial cord bifurcates at its end.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in salivary gland branching","termid":"GO:0060666"}


id: SO:1000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome carrying the two right (D = dextro) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrosynaptic_chromosome","synonyms":[{"name":"dextrosynaptic chromosome","type":"exact"}],"termid":"SO:1000142"}


id: PBO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 13","termid":"PBO:0071818"}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: PR:O13614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.08","synonyms":[{"name":"Spom972h-rps1002","type":"exact"}],"termid":"PR:O13614"}


id: PBO:0069286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 542, pseudogene","termid":"PBO:0069286"}


id: PBO:0075520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E1","termid":"PBO:0075520"}


id: PBO:0080950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 4","termid":"PBO:0080950"}


id: GO:0160112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the B tubule of the axonemal microtubule doublet that helps stabilize the B tubule.","definition_xrefs":["GOC:krc","PMID:37295417","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal B tubule inner sheath","termid":"GO:0160112"}


id: PBO:0054529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1929","termid":"PBO:0054529"}


id: PBO:0043405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 2","termid":"PBO:0043405"}


id: GO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which free ubiquitin chains, compounds composed of a large number of ubiquitin monomers, are broken down.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain depolymerization","termid":"GO:0010995"}


id: PBO:0075908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13 Hsp70 interacting protein","termid":"PBO:0075908"}


id: PBO:0029797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_distribution","termid":"PBO:0029797"}


id: PBO:0083621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2 ubiquitin-conjugating enzyme; involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus","termid":"PBO:0083621"}


id: PBO:0055207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2632","termid":"PBO:0055207"}


id: PATO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern quality inhering in a bearer by virtue of the bearer's inability to sleep.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000442 insomnia (obsolete PATO:0000442)","termid":"PATO:0000442"}


id: GO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cycloheximide from one side of a membrane to the other. Cycloheximide is an antibiotic produced by Streptomyces which interferes with protein synthesis in eukaryotes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cycloheximide transmembrane transporter activity","synonyms":[{"name":"cycloheximide transporter activity","type":"related"}],"termid":"GO:0015243"}


id: GO:0018615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-indanone + NADPH + 1/2 O2 = NADP+ + 3-isochromanone.","definition_xrefs":["UM-BBD_reactionID:r0424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-indanone monooxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018615"}


id: GO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of the DNA polymerase III holoenzyme which is responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication. The complex is homodimeric in prokaryotes, and homotrimeric in other species.","definition_xrefs":["GOC:jl","UniProt:O73947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase processivity factor complex","termid":"GO:0044796"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase III, beta sliding clamp processivity factor complex","termid":"GO:0044775"}


id: GO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 somatostatin receptor binding","synonyms":[{"name":"type 2 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031879"}


id: PBO:0073498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 3","termid":"PBO:0073498"}


id: GO:0072329
data:
  {"annotated_genes":["SJAG_00413","SJAG_03804","SJAG_03852","SJAG_00633","SJAG_00281","SJAG_00706","SJAG_01432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78553,78893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046177"},{"annotations":[72827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[96550,100533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[78871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_00413":null,"SJAG_00633":null,"SJAG_00706":null,"SJAG_01432":null,"SJAG_03804":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"monocarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072329","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0009436":null,"GO:0046177":null,"GO:1903457":null}}


id: PBO:0081986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 12 pseudogene 1","termid":"PBO:0081986"}


id: GO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development of a photoreceptor, a receptor that responds to light, in the adult Drosophila eye.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adult eye photoreceptor development (sensu Drosophila) (obsolete GO:0001753)","synonyms":[{"name":"adult eye photoreceptor development (sensu Drosophila)","type":"exact"}],"termid":"GO:0001753"}


id: GO:0102904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = germacrene C + diphosphoric acid.","definition_xrefs":["EC:4.2.3.60","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"germacrene C synthase activity","secondary_identifiers":["RHEA:28302","MetaCyc:RXN-8561"],"termid":"GO:0102904"}


id: GO:1900508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur-molybdenum cofactor assembly","termid":"GO:1900506"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"activation of FeMoco assembly","type":"exact"},{"name":"activation of FeMoco biosynthetic process","type":"exact"},{"name":"activation of iron molybdenum cofactor assembly","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"activation of iron-sulfur-molybdenum cofactor assembly","type":"narrow"},{"name":"positive regulation of FeMoco assembly","type":"exact"},{"name":"positive regulation of FeMoco biosynthetic process","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of FeMoco assembly","type":"exact"},{"name":"up regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of FeMoco assembly","type":"exact"},{"name":"up-regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up-regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of FeMoco assembly","type":"exact"},{"name":"upregulation of FeMoco biosynthetic process","type":"exact"},{"name":"upregulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"upregulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"}],"termid":"GO:1900508"}


id: PBO:0050088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 8","termid":"PBO:0050088"}


id: PBO:0051762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7 pseudogene 1","termid":"PBO:0051762"}


id: GO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z)-2-(acetamidomethylene)-3-(hydroxymethyl)succinate + 2 H2O + H+ = 2-(hydroxymethyl)-4-oxobutanoate + acetate + CO2 + NH4.","definition_xrefs":["EC:3.5.1.66","RHEA:17677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"2-(hydroxymethyl)-3-(acetamidomethylene)succinate hydrolase activity","secondary_identifiers":["MetaCyc:3.5.1.66-RXN","Wikipedia:2-(hydroxymethyl)-3-(acetamidomethylene)succinate_amidohydrolase_(deaminating\\,_decarboxylating)","KEGG_REACTION:R04397"],"synonyms":[{"name":"2-(hydroxymethyl)-3-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating)","type":"related"},{"name":"alpha-hydroxymethyl-alpha'-(N-acetylaminomethylene)succinic acid hydrolase activity","type":"related"},{"name":"compound B hydrolase activity","type":"related"}],"termid":"GO:0047414"}


id: GO:0016218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a multistep reaction that produce polyketides through decarboxylative condensation of carboxylic acids. The key chain-building reaction, a C-N bond-forming reaction, involves the generation of the characteristic peptide bond by nucleophilic attack of the amino group of an amino-acyl donor unit covalently bound to a downstream peptidyl carrier protein module (amino acyl-S-PCP) on the acyl group of an upstream electrophilic acyl- or peptidyl acyl-S-PCP chain, catalyzed by a condensation (C) domain. Supplementing these core chain-elongation domains are variable numbers of auxiliary domains that are responsible for modification of the growing polypeptide chain by a small set of iterated reactions including epimerization, N-methylation, and heterocyclization.","definition_xrefs":["PMID:10631508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyketide synthase activity","synonyms":[{"name":"PKS activity","type":"related"}],"termid":"GO:0016218"}


id: GO:1903312
data:
  {"annotated_genes":["SJAG_03696","SJAG_02573","SJAG_04825","SJAG_03283","SJAG_03448","SJAG_04946","SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85913,77695,95613,77420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[85220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[84832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"negatively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA metabolic process","type":"exact"},{"name":"down regulation of mRNA metabolism","type":"exact"},{"name":"down-regulation of mRNA metabolic process","type":"exact"},{"name":"down-regulation of mRNA metabolism","type":"exact"},{"name":"downregulation of mRNA metabolic process","type":"exact"},{"name":"downregulation of mRNA metabolism","type":"exact"},{"name":"inhibition of mRNA metabolic process","type":"narrow"},{"name":"inhibition of mRNA metabolism","type":"narrow"},{"name":"negative regulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903312","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0120271":null,"GO:1902373":null}}


id: GO:1900570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diorcinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"diorcinol metabolic process","synonyms":[{"name":"diorcinol metabolism","type":"exact"}],"termid":"GO:1900570"}


id: PBO:0055899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 20","termid":"PBO:0055899"}


id: PR:Q09674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0317 protein C5H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.01","synonyms":[{"name":"Spom972h-SPAC5H10.01","type":"exact"}],"termid":"PR:Q09674"}


id: PBO:0027323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_mtDNA_level","termid":"PBO:0027323"}


id: PBO:0041708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 3","termid":"PBO:0041708"}


id: MOD:00434
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a hexose sugar group through a glycosidic bond.","definition_xrefs":["DeltaMass:203","Unimod:41","PubMed:15279557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"hexosylated residue","synonyms":[{"name":"Hex","type":"exact"},{"name":"Hexose","type":"related"},{"name":"Hexoses (Fru, Gal, Glc, Man)","type":"exact"},{"name":"O-Glycosyl-","type":"exact"}],"termid":"MOD:00434"}


id: GO:0006420
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"}]},"cv_name":"biological_process","definition":"The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. The arginyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of an alanine accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"arginyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006420","terms_by_termid":{"GO:0070144":null}}


id: GO:1900855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fumitremorgin B biosynthetic process (obsolete GO:1900855)","synonyms":[{"name":"regulation of Lanosulin anabolism","type":"related"},{"name":"regulation of Lanosulin biosynthesis","type":"related"},{"name":"regulation of Lanosulin biosynthetic process","type":"related"},{"name":"regulation of Lanosulin formation","type":"related"},{"name":"regulation of Lanosulin synthesis","type":"related"},{"name":"regulation of fumitremorgin B anabolism","type":"exact"},{"name":"regulation of fumitremorgin B biosynthesis","type":"exact"},{"name":"regulation of fumitremorgin B formation","type":"exact"},{"name":"regulation of fumitremorgin B synthesis","type":"exact"}],"termid":"GO:1900855"}


id: FYPO:0004195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type) during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to telomere during meiosis","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localisation to telomere during meiosis","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localization to telomere during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004195"}


id: GO:0072713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thiabendazole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to thiabendazole","termid":"GO:0072712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thiabendazole","synonyms":[{"name":"cellular response to TBZ","type":"exact"}],"termid":"GO:0072713"}


id: GO:1904837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a beta-catenin-TCF complex.","definition_xrefs":["PMID:18936100","GO_REF:0000079","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"beta-catenin-TCF complex assembly","synonyms":[{"name":"beta-catenin-TCF complex formation","type":"exact"},{"name":"beta-catenin/LEF complex assembly","type":"narrow"},{"name":"beta-catenin/LEF complex formation","type":"narrow"},{"name":"beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"beta-catenin/T-cell factor complex formation","type":"related"},{"name":"beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904837"}


id: GO:0046567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate + H2O = aphidicolan-16-beta-ol + diphosphate.","definition_xrefs":["PMID:12149019","EC:4.2.3.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aphidicolan-16 beta-ol synthase activity","secondary_identifiers":["KEGG_REACTION:R06313","MetaCyc:RXN-10631","RHEA:26213"],"synonyms":[{"name":"9-alpha-copalyl-diphosphate diphosphate-lyase (aphidicolan-16-beta-ol-forming)","type":"related"}],"termid":"GO:0046567"}


id: PBO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta (WD repeat) subunit Gnr1","termid":"PBO:0090605"}


id: GO:0044201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the host nuclear envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear membrane","termid":"GO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear inner membrane","termid":"GO:0044201"}


id: PBO:0058966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 9, pseudogene","termid":"PBO:0058966"}


id: PR:Q8WZK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC839.03c gene.","definition_xrefs":["UniProtKB:Q8WZK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.03c","synonyms":[{"name":"Spom972h-SPBC839.03c","type":"exact"}],"termid":"PR:Q8WZK4"}


id: GO:0050666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of homocysteine metabolic process","synonyms":[{"name":"regulation of Hcy metabolic process","type":"exact"},{"name":"regulation of Hcy metabolism","type":"exact"},{"name":"regulation of homocysteine metabolism","type":"exact"}],"termid":"GO:0050666"}


id: GO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + 2-oxoglutarate + O2 = a flavone + succinate + CO2 + H2O.","definition_xrefs":["EC:1.14.20.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavone synthase activity","secondary_identifiers":["MetaCyc:RXN-8000","RHEA:10448"],"synonyms":[{"name":"FNS I","type":"related"},{"name":"flavanone,2-oxoglutarate:oxygen oxidoreductase (dehydrating) activity","type":"related"},{"name":"flavone synthase I activity","type":"related"}],"termid":"GO:0033759"}


id: PBO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_catabolism_of","termid":"PBO:0034092"}


id: GO:0097107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:21525273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"},{"relation_name":"part_of","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"postsynaptic density assembly","synonyms":[{"name":"PSD assembly","type":"exact"},{"name":"post synaptic density assembly","type":"exact"},{"name":"post-synaptic density assembly","type":"exact"}],"termid":"GO:0097107"}


id: SO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer bound by a factor.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_factor","termid":"SO:0000277"},{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_bound_by_factor","synonyms":[{"name":"enhancer bound by factor","type":"exact"}],"termid":"SO:0000166"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: GO:0072058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer stripe over time, from its formation to the mature structure. The outer stripe is the region of the kidney outer medulla that lies just below the cortex. The proximal straight tubules (S3) characterize this region.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"renal outer medulla development","termid":"GO:0072054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer stripe development","termid":"GO:0072058"}


id: PBO:0051145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-23","termid":"PBO:0051145"}


id: PBO:0070509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 8","termid":"PBO:0070509"}


id: GO:0038144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated receptor ERBB4. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB4.","definition_xrefs":["GOC:signaling","Reactome:R-HSA-1250224","PMID:16460914","PMID:16978839","Reactome:R-HSA-1963573","Reactome:R-HSA-1963589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ERBB4:ERBB2 complex","synonyms":[{"name":"ERBB4:ERBB2 heterodimer","type":"narrow"},{"name":"NRGs/EGFLs:ERBB4:ERBB2","type":"narrow"}],"termid":"GO:0038144"}


id: PBO:0038765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 2","termid":"PBO:0038765"}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["PMID:17564681","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


id: PBO:0067543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 689, pseudogene","termid":"PBO:0067543"}


id: GO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllide a, a chlorophyll lacking the terpenoid side chain, which is the functional parent of chlorophyll a.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"chlorophyllide metabolic process","termid":"GO:0052643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"chlorophyllide a metabolic process","synonyms":[{"name":"chlorophyllide a metabolism","type":"exact"}],"termid":"GO:0052644"}


id: PR:Q9UT91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP protein subunit rmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.08","synonyms":[{"name":"RNA-processing protein rmp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rmp1","type":"exact"}],"termid":"PR:Q9UT91"}


id: PBO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein Plp2 (predicted)","termid":"PBO:0016091"}


id: GO:2001269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043280"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","termid":"GO:2001267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","synonyms":[{"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001269"}


id: GO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows leptotene during prophase I of meiosis, and during which each chromosome pairs with its homolog; the two become aligned and crossing over may occur.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007128"}],"interesting_parent_ids":["GO:0008150","GO:0007128"],"is_obsolete":false,"name":"zygotene","secondary_identifiers":["Wikipedia:Zygotene","Wikipedia:Meiosis#Zygotene"],"termid":"GO:0000238"}


id: GO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mucopolysaccharide metabolic process","termid":"GO:1903510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"keratan sulfate metabolic process","synonyms":[{"name":"keratan sulfate metabolism","type":"exact"},{"name":"keratan sulphate metabolic process","type":"exact"},{"name":"keratan sulphate metabolism","type":"exact"}],"termid":"GO:0042339"}


id: GO:1903260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating projection tip.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:11952834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mating projection tip","synonyms":[{"name":"protein localisation in mating projection tip","type":"exact"},{"name":"protein localisation to mating projection tip","type":"exact"},{"name":"protein localization in mating projection tip","type":"exact"},{"name":"protein localization to conjugation tube tip","type":"narrow"},{"name":"protein localization to shmoo tip","type":"narrow"}],"termid":"GO:1903260"}


id: GO:0003762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in chromatin assembly by chaperoning histones on to replicating DNA, but is not a component of the assembled nucleosome when performing its normal biological function.","definition_xrefs":["PMID:7600578","GOC:jl","PMID:9325046"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-specific chaperone activity (obsolete GO:0003762)","synonyms":[{"name":"histone-specific chaperone activity","type":"exact"},{"name":"nucleosome assembly chaperone","type":"exact"}],"termid":"GO:0003762"}


id: GO:0050758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thymidylate synthase biosynthetic process (obsolete GO:0050758)","synonyms":[{"name":"regulation of thymidylate synthase anabolism","type":"exact"},{"name":"regulation of thymidylate synthase biosynthesis","type":"exact"},{"name":"regulation of thymidylate synthase formation","type":"exact"},{"name":"regulation of thymidylate synthase synthesis","type":"exact"}],"termid":"GO:0050758"}


id: GO:0036435
data:
  {"annotated_genes":["SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76271],"is_not":false,"summary":null,"term":"GO:0036435"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 48 in the target protein.","definition_xrefs":["PMID:20739285","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"K48-linked polyubiquitin modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5683077"],"termid":"GO:0036435","terms_by_termid":{"GO:0036435":null}}


id: PBO:0017776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by canine rab8","termid":"PBO:0017776"}


id: PBO:0074202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 12","termid":"PBO:0074202"}


id: PBO:0088788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rok1","termid":"PBO:0088788"}


id: PBO:0017634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit TPR lobe accessory factor Hcn1/Apc12","termid":"PBO:0017634"}


id: GO:1901559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ribavirin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ribavirin","termid":"GO:1901559"}


id: PR:Q9Y7J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2/3 complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12391:SF0","OMA:SCHPO03569","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.08c","secondary_identifiers":["UniProtKB:Q9Y7J4"],"synonyms":[{"name":"Spom972h-ARPC3","type":"exact"},{"name":"arp2/3 complex 21 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p21-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J4"}


id: FYPO:0001582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing glutathione.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on glutathione","synonyms":[{"name":"normal cell population growth in presence of glutathione","type":"exact"},{"name":"normal cell population growth on GSH","type":"exact"},{"name":"normal cell population growth on L-gamma-glutamyl-L-cysteinylglycine","type":"exact"},{"name":"normal cell population growth on glutathione","type":"exact"},{"name":"normal cell population growth on reduced glutathione","type":"exact"},{"name":"normal cellular response to glutathione","type":"related"},{"name":"normal vegetative cell population growth on glutathione","type":"exact"}],"termid":"FYPO:0001582"}


id: PBO:0074378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 4","termid":"PBO:0074378"}


id: PBO:0055865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 12","termid":"PBO:0055865"}


id: PBO:0081255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 25","termid":"PBO:0081255"}


id: GO:0009725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hormone","synonyms":[{"name":"growth regulator","type":"related"},{"name":"response to hormone stimulus","type":"exact"}],"termid":"GO:0009725"}


id: GO:2001295
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93923],"is_not":false,"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"malonyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malonyl-CoA anabolism","type":"exact"},{"name":"malonyl-CoA biosynthesis","type":"exact"},{"name":"malonyl-CoA formation","type":"exact"},{"name":"malonyl-CoA synthesis","type":"exact"}],"termid":"GO:2001295","terms_by_termid":{"GO:2001295":null}}


id: GO:0009842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid that contains unstacked, phycobilisome-bearing thylakoid membranes and is surrounded by a double membrane with a peptidoglycan layer in the intermembrane space between the two envelope membranes. Cyanelles are characteristic of algae in the class Glaucophyta, and may represent an ancestral form of plastid.","definition_xrefs":["ISBN:0521316871","ISBN:1402001894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle","synonyms":[{"name":"cyanoplast","type":"exact"},{"name":"muroplast","type":"exact"}],"termid":"GO:0009842"}


id: PBO:0064341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin domain containing 1","termid":"PBO:0064341"}


id: GO:0071969
data:
  {"annotated_genes":["SJAG_04483","SJAG_05285","SJAG_02222","SJAG_04666","SJAG_01290","SJAG_00876","SJAG_01835","SJAG_04771","SJAG_00218","SJAG_03587","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[87262,87253,83853,101541,104696,103198,111083,108485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83308,88070],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of fungi.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0071969","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: PR:000027593
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PMID:11242054","PRO:DAN","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/InitMet-/Me:(K9)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me","type":"exact"},{"name":"hht2/InitMet-/Me:(K10)","type":"exact"},{"name":"hht2/InitMet-/Me:(K9)","type":"exact"}],"termid":"PR:000027593"}


id: PBO:0063778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 5","termid":"PBO:0063778"}


id: FYPO:0003417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule plus ends remain in contact with the cell cortex at cell tips for a longer time than normal.","definition_xrefs":["PMID:24530531","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased microtubule dwell time at cell tip","synonyms":[{"name":"increased microtubule dwell time at cell end","type":"exact"},{"name":"increased microtubule dwell time at cell tip during mitotic cell cycle","type":"related"},{"name":"increased microtubule dwell time at cell tip during vegetative growth","type":"exact"},{"name":"increased microtubule plus end dwell time at cell tip","type":"exact"}],"termid":"FYPO:0003417"}


id: PBO:0049548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 11","termid":"PBO:0049548"}


id: GO:0051090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA-binding transcription factor activity","secondary_identifiers":["GO:1904167","GO:2000823"],"synonyms":[{"name":"regulation of DNA binding transcription factor activity","type":"exact"},{"name":"regulation of androgen receptor activity","type":"narrow"},{"name":"regulation of sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"regulation of thyroid hormone receptor activity","type":"narrow"},{"name":"regulation of transcription factor activity","type":"broad"}],"termid":"GO:0051090"}


id: PR:O94521
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.04","synonyms":[{"name":"PL reductase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1281.04","type":"exact"}],"termid":"PR:O94521"}


id: PBO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be involved in vacuolar functions; mutant shows defect in CPY processing and fragmented vacuoles; deletion mutant has increased glycogen accumulation and displays elongated buds; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; ENV11 has a paralog, VID22, that arose from the whole genome duplication","termid":"PBO:0086097"}


id: PBO:0086347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns-3-P binding protein that tethers the ER to vacuoles at NVJs; anchored in the ER membrane at nucleus-vacuole junctions and binds phosphatidylinositol 3-phosphate (PtdIns-3-P) in the vacuolar membrane via its Phox homology (PX) domain; expressed predominantly in late G1 to early S phase of the cell cycle; mutation affects nuclear and mitochondrial transmission to daughter buds; similar to 4 human genes, one of which (SNX14) is associated with neurological disease","termid":"PBO:0086347"}


id: PBO:0081511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 417","termid":"PBO:0081511"}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: PR:Q9P6H9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- reb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6H9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein reb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.11c","synonyms":[{"name":"Spom972h-reb1","type":"exact"}],"termid":"PR:Q9P6H9"}


id: GO:0099036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of neuronal dense core vesicle membrane (obsolete GO:0099036)","termid":"GO:0099036"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GOC:mengo_curators","PMID:23826995","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: FYPO:0007331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing formaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on formaldehyde","synonyms":[{"name":"normal cell population growth in presence of formaldehyde","type":"exact"},{"name":"normal cell population growth on formaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on formaldehyde","type":"exact"}],"termid":"FYPO:0007331"}


id: GO:0102177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylenelophenol + O2 + NADH + H+ = 4alpha-hydroxymethyl-ergosta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","RHEA:58872","PMID:11707264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"24-methylenelophenol methyl oxidase activity","secondary_identifiers":["EC:1.14.18.11","MetaCyc:RXN-11930"],"termid":"GO:0102177"}


id: PBO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2D","termid":"PBO:0044870"}


id: GO:0016150
data:
  {"annotated_genes":["SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94211],"is_not":false,"summary":null,"term":"GO:0016150"}]},"cv_name":"molecular_function","definition":"A translation release factor that is not specific to particular codons; binds to guanine nucleotides.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation release factor activity","termid":"GO:0003747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0045182","GO:0005488"],"is_obsolete":false,"name":"translation release factor activity, codon nonspecific","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016150","terms_by_termid":{"GO:0016150":null}}


id: PR:Q9UUM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC405.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUM6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C405.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.02c","synonyms":[{"name":"Spom972h-SPBC405.02c","type":"exact"}],"termid":"PR:Q9UUM6"}


id: FYPO:0007617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium azide (NaN3). Cells stop growing (and may die) at a concentration of sodium azide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sodium azide","synonyms":[{"name":"sensitive to NaN3","type":"exact"},{"name":"sensitive to sodium azide during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium azide during vegetative growth","type":"exact"}],"termid":"FYPO:0007617"}


id: PBO:0070567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 33","termid":"PBO:0070567"}


id: PBO:0051959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR interacting domain containing 2","termid":"PBO:0051959"}


id: PBO:0074945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 109B","termid":"PBO:0074945"}


id: GO:0106305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannogen, a mannose-containing polysaccharide that is a major energy reserve in Leishmania.","definition_xrefs":["PMID:31662278","PMID:12902334","PMID:31513773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"mannogen metabolic process","termid":"GO:0106303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannogen catabolic process","synonyms":[{"name":"beta-1,2-mannan catabolic process","type":"related"},{"name":"beta-1,2-mannan catabolism","type":"related"},{"name":"mannogen breakdown","type":"related"},{"name":"mannogen catabolism","type":"related"},{"name":"mannogen degradation","type":"related"}],"termid":"GO:0106305"}


id: PBO:0086921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Zn(II)2Cys6 motif containing transcription factor; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; similar to S. kluyveri Urc2p involved in uracil catabolism","termid":"PBO:0086921"}


id: PR:P87170
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptp4 gene.","definition_xrefs":["UniProtKB:P87170","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP-dependent diacylglycerol kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.05","synonyms":[{"name":"DAG kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptp4","type":"exact"},{"name":"diglyceride kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87170"}


id: PATO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Flattened from above downward; below the normal level or the level of the surrounding parts.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sunken","termid":"PATO:0002416"}


id: GO:0047050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxystearate + NAD+ = 2-oxostearate + H+ + NADH.","definition_xrefs":["RHEA:11384","EC:1.1.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-2-hydroxy-fatty acid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03022","MetaCyc:1.1.1.99-RXN"],"synonyms":[{"name":"(S)-2-hydroxy-fatty-acid dehydrogenase activity","type":"exact"},{"name":"(S)-2-hydroxystearate:NAD+ oxidoreductase activity","type":"related"},{"name":"2-hydroxy fatty acid oxidase","type":"broad"},{"name":"L-2-hydroxy fatty acid dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-2-hydroxy fatty acid","type":"related"}],"termid":"GO:0047050"}


id: PBO:0067845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 147","termid":"PBO:0067845"}


id: PBO:0073447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 1","termid":"PBO:0073447"}


id: PBO:0058260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4638","termid":"PBO:0058260"}


id: PBO:0034614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_vegetative_cell_with_normal_cell_length","termid":"PBO:0034614"}


id: PBO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc4","termid":"PBO:0004543"}


id: PBO:0068079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 385","termid":"PBO:0068079"}


id: SO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene and one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_cluster","synonyms":[{"name":"D DJ cluster","type":"exact"},{"name":"D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000505"}


id: PBO:0050768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family H (Hsp110) member 1","termid":"PBO:0050768"}


id: SO:1001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Four base pair sequence immediately downstream of the redefined region. The redefined region is a frameshift site. The quadruplet is 2 overlapping codons.","definition_xrefs":["SO:ke","PMID:12519954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_three_prime_quadruplet_recoding_signal","synonyms":[{"name":"flanking three prime quadruplet recoding signal","type":"exact"}],"termid":"SO:1001281"}


id: PBO:0039684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1 interacting protein","termid":"PBO:0039684"}


id: PBO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unmerged","termid":"PBO:0002035"}


id: FYPO:0000992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-3-phosphate level","type":"exact"},{"name":"altered PI-3-P accumulation","type":"related"},{"name":"altered cellular PI(3)P level","type":"exact"},{"name":"altered cellular PI-3-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000992"}


id: GO:1901462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"positively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to formic acid","synonyms":[{"name":"activation of response to formic acid","type":"narrow"},{"name":"up regulation of response to formic acid","type":"exact"},{"name":"up-regulation of response to formic acid","type":"exact"},{"name":"upregulation of response to formic acid","type":"exact"}],"termid":"GO:1901462"}


id: PBO:0077448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 181","termid":"PBO:0077448"}


id: PBO:0064619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 1","termid":"PBO:0064619"}


id: PBO:0073249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2 pseudogene 1","termid":"PBO:0073249"}


id: PBO:0072399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 4","termid":"PBO:0072399"}


id: GO:2000312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kainate selective glutamate receptor activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0055085"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor activity","termid":"GO:2000312"}


id: PBO:0072881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 1","termid":"PBO:0072881"}


id: FYPO:0001996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect when the cell is subject to nitrogen starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during nitrogen starvation","synonyms":[{"name":"RNA absent from cell during nitrogen depletion","type":"exact"},{"name":"RNA absent from cell during nitrogen deprivation","type":"exact"},{"name":"transcripts absent from cell during nitrogen starvation","type":"exact"},{"name":"undetectable cellular RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001996"}


id: PBO:0055715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 1","termid":"PBO:0055715"}


id: PBO:0004932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II (predicted)","termid":"PBO:0004932"}


id: PBO:0088127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein; involved in multiple drug resistance and metal sensitivity; ATP-binding cassette (ABC) family member involved in drug transport; potential Cdc28p substrate; induced under respiratory conditions; VMR1 has a paralog, YBT1, that arose from the whole genome duplication","termid":"PBO:0088127"}


id: PBO:0071949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4 Y-linked 2","termid":"PBO:0071949"}


id: PBO:0051444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-30 (pseudogene)","termid":"PBO:0051444"}


id: PBO:0038474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 12","termid":"PBO:0038474"}


id: GO:0005899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disulfide-bonded, heterotetrameric receptor complex. The alpha chains are entirely extracellular, while each beta chain has one transmembrane domain. The ligand binds to the alpha subunit extracellular domain and the kinase is associated with the beta subunit intracellular domain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"insulin receptor complex","termid":"GO:0005899"}


id: PATO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000739 absolute enzyme function value (obsolete PATO:0000739)","termid":"PATO:0000739"}


id: GO:0060674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the placenta over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"placenta blood vessel development","termid":"GO:0060674"}


id: FYPO:0001873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly takes place despite the absence of cells of the opposite mating type.","definition_xrefs":["PMID:1905818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"shmoo formation in absence of opposite mating type","synonyms":[{"name":"conjugation tube formation in absence of opposite mating type","type":"related"},{"name":"mating projection assembly in absence of opposite mating type","type":"exact"},{"name":"mating projection formation in absence of opposite mating type","type":"exact"},{"name":"shmoo without partner cell","type":"broad"}],"termid":"FYPO:0001873"}


id: GO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of C-type lectin to its receptor on the surface of a target cell, and resulting in cellular activation.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"cellular response to lectin","termid":"GO:1990858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stimulatory C-type lectin receptor signaling pathway","synonyms":[{"name":"stimulatory C-type lectin receptor signalling pathway","type":"exact"},{"name":"stimulatory Ly49 family receptor signaling pathway","type":"narrow"}],"termid":"GO:0002223"}


id: GO:0036159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein inner arm, an inner arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:19944400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex assembly","termid":"GO:0070286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0000226","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"inner dynein arm assembly","synonyms":[{"name":"IDA assembly","type":"exact"}],"termid":"GO:0036159"}


id: GO:0099019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which localization of a protein is maintained at the growing cell tip.","definition_xrefs":["PMID:24146635","GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization at cell tip","termid":"GO:0099017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein localization at growing cell tip","synonyms":[{"name":"maintenance of protein location at growing cell tip","type":"exact"}],"termid":"GO:0099019"}


id: PBO:0043082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 2 subunit","termid":"PBO:0043082"}


id: PBO:0012055
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpb3 was previously considered to be SPAC17G8.03c but this new gene product appears to be the true ortholog of DPB3/POLE4 see Treefam:TF103009","termid":"PBO:0012055"}


id: MOD:00261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphouridine through a phosphodiester bond to form O4'-(phospho-5'-uridine)-L-tyrosine.","definition_xrefs":["DeltaMass:0","PubMed:2885322","PubMed:11467524","Unimod:417#Y","RESID:AA0256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-uridine)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-uridine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-uridylic-O-tyrosine","type":"exact"},{"name":"MOD_RES O-UMP-tyrosine","type":"exact"},{"name":"O-Uridinylylation (of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-uridine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-uridine phosphodiester","type":"exact"},{"name":"OUMPTyr","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"hydrogen 5'-uridylate tyrosine ester","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00261"}


id: PBO:0090996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8-interacting ER-phagy receptor Epr1","termid":"PBO:0090996"}


id: PBO:0089954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0642 conserved fungal protein","termid":"PBO:0089954"}


id: PBO:0074714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75","termid":"PBO:0074714"}


id: GO:0000179
data:
  {"annotated_genes":["SJAG_03289","SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59441],"is_not":false,"summary":null,"term":"GO:0000179"},{"annotations":[104494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the dimethylation of two adjacent adenine residues in a rRNA, using S-adenosyl-L-methionine as a methyl donor.","definition_xrefs":["PMID:10690410","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02821":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790994","Reactome:R-HSA-6793066","GO:0043790"],"synonyms":[{"name":"18S rRNA dimethylase activity","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase activity","type":"exact"},{"name":"dimethyladenosine transferase activity","type":"exact"}],"termid":"GO:0000179","terms_by_termid":{"GO:0000179":null,"GO:0052909":null}}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["PMID:22588719","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: PBO:0043996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone 1","termid":"PBO:0043996"}


id: FYPO:0003164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclease activity is absent. All nuclease activities may be absent, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished nuclease activity","synonyms":[{"name":"nuclease activity abolished","type":"exact"}],"termid":"FYPO:0003164"}


id: PBO:0039965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 8","termid":"PBO:0039965"}


id: PBO:0076588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 10A","termid":"PBO:0076588"}


id: GO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling involved in heart development","synonyms":[{"name":"Notch signalling involved in heart development","type":"exact"}],"termid":"GO:0061314"}


id: PBO:0064608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 2","termid":"PBO:0064608"}


id: GO:0052039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cytoskeleton","secondary_identifiers":["GO:0044054"],"synonyms":[{"name":"disruption by symbiont of host cytoskeleton","type":"related"},{"name":"modification by symbiont of host cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host cytoskeleton","type":"exact"},{"name":"rounding by symbiont of host cells","type":"narrow"}],"termid":"GO:0052039"}


id: FYPO:0001535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular zinc level","synonyms":[{"name":"normal cellular zinc accumulation","type":"related"},{"name":"normal cellular zinc ion level","type":"exact"},{"name":"normal cellular zinc level during mitotic cell cycle","type":"related"},{"name":"normal cellular zinc level during vegetative growth","type":"exact"}],"termid":"FYPO:0001535"}


id: GO:2000621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA replication termination.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"DNA replication termination","termid":"GO:0006274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA replication termination","termid":"GO:2000621"}


id: PBO:0041657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNG2 divergent transcript","termid":"PBO:0041657"}


id: PBO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 8 (pseudogene)","termid":"PBO:0060160"}


id: GO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont glucan (obsolete GO:0052358)","termid":"GO:0052358"}


id: PBO:0027072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_replication_lagging_strand_elongation_at_telomere","termid":"PBO:0027072"}


id: PBO:0083167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W","termid":"PBO:0083167"}


id: PBO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expresses","termid":"PBO:0034129"}


id: PR:O94560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- far8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1773.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.01","synonyms":[{"name":"Spom972h-far8","type":"exact"}],"termid":"PR:O94560"}


id: PBO:0089800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1","termid":"PBO:0089800"}


id: PBO:0047833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P4","termid":"PBO:0047833"}


id: GO:0071907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of various parts of the digestive tract with respect to the left and right halves of the organism. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of digestive tract left/right asymmetry","synonyms":[{"name":"determination of gut left/right asymmetry","type":"exact"},{"name":"determination of left/right asymmetry of the digestive tract","type":"exact"}],"termid":"GO:0071907"}


id: GO:0106008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutaramate + H2O = 2-oxoglutarate + NH3.","definition_xrefs":["EC:3.5.1.111","PMID:21288482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutaramate amidase activity","secondary_identifiers":["RHEA:32963"],"termid":"GO:0106008"}


id: PBO:0059659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 25","termid":"PBO:0059659"}


id: PATO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"To bent or hang downwards.","definition_xrefs":["thefreedictionary.:thefreedictionary."],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drooping","synonyms":[{"name":"sagging","type":"exact"}],"termid":"PATO:0002165"}


id: GO:0031648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein destabilization","synonyms":[{"name":"negative regulation of protein stability","type":"exact"},{"name":"protein destabilisation","type":"exact"}],"termid":"GO:0031648"}


id: PBO:0062296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 7 pseudogene","termid":"PBO:0062296"}


id: PBO:0018147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein involved in inositol lipid-mediated signaling Sfk1 (predicted)","termid":"PBO:0018147"}


id: PATO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001072 absolute energy (obsolete PATO:0001072)","termid":"PATO:0001072"}


id: PBO:0061452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 4 group A member 3","termid":"PBO:0061452"}


id: PBO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 2","termid":"PBO:0061568"}


id: PBO:0081349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 160","termid":"PBO:0081349"}


id: PBO:0070629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 13","termid":"PBO:0070629"}


id: PBO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd90 protein","termid":"PBO:0003833"}


id: PBO:0074535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA H","termid":"PBO:0074535"}


id: PBO:0044471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily A member 1","termid":"PBO:0044471"}


id: GO:0052851
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108122],"is_not":false,"summary":null,"term":"GO:0052851"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + NADP+ + H+ -> 2 Fe2+-siderophore + NADPH.","definition_xrefs":["RHEA:28795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-chelate reductase activity","termid":"GO:0000293"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ferric-chelate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-6555","EC:1.16.1.9","KEGG_REACTION:R09541"],"synonyms":[{"name":"ferric chelate reductase activity","type":"broad"},{"name":"ferric reductase, NADPH-dependent activity","type":"exact"},{"name":"iron chelate reductase activity","type":"broad"}],"termid":"GO:0052851","terms_by_termid":{"GO:0052851":null}}


id: GO:0032899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurotrophin production","termid":"GO:0032899"}


id: PBO:0005227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc6","termid":"PBO:0005227"}


id: FYPO:0001420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow at the same rate as wild type in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"},{"relation_name":"is_a","term_name":"normal cell population growth rate","termid":"FYPO:0001419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal vegetative cell population growth rate","synonyms":[{"name":"normal growth rate","type":"broad"},{"name":"normal vegetative cell population proliferation","type":"related"},{"name":"normal vegetative cell proliferation","type":"related"}],"termid":"FYPO:0001420"}


id: PBO:0048721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase","termid":"PBO:0048721"}


id: GO:1990686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate low-density lipoprotein (LDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"LDL-containing protein-lipid-RNA complex","termid":"GO:1990686"}


id: PBO:0073143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 homolog A, COPII coat complex component","termid":"PBO:0073143"}


id: PBO:0061907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily A member 1","termid":"PBO:0061907"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","secondary_identifiers":["MetaCyc:THIOREDOX-PWY"],"synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: PBO:0072944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 23","termid":"PBO:0072944"}


id: FYPO:0000664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified catalytic activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished catalytic activity","synonyms":[{"name":"catalytic activity abolished","type":"exact"}],"termid":"FYPO:0000664"}


id: PR:O74990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04646","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.13","secondary_identifiers":["UniProtKB:O74990"],"synonyms":[{"name":"Spom972h-COG4","type":"exact"},{"name":"COG complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"component of oligomeric Golgi complex 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74990"}


id: PBO:0062947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 5","termid":"PBO:0062947"}


id: GO:0042047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor biosynthetic process","termid":"GO:0032324"},{"relation_name":"is_a","term_name":"W-molybdopterin cofactor metabolic process","termid":"GO:0042046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor biosynthetic process","synonyms":[{"name":"Moco biosynthesis","type":"broad"},{"name":"Moco biosynthetic process","type":"broad"},{"name":"W-molybdopterin cofactor anabolism","type":"exact"},{"name":"W-molybdopterin cofactor biosynthesis","type":"exact"},{"name":"W-molybdopterin cofactor formation","type":"exact"},{"name":"W-molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0042047"}


id: FYPO:0002632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which dTTP biosynthesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal dTTP biosynthetic process","termid":"FYPO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased dTTP biosynthetic process","synonyms":[{"name":"decreased dTTP biosynthesis","type":"exact"},{"name":"decreased dTTP biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased dTTP biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced dTTP biosynthetic process","type":"exact"}],"termid":"FYPO:0002632"}


id: GO:0014862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by regulating force and velocity of shortening. The force of skeletal muscle contraction is produced by acto-myosin interaction processes through formation of cross bridges. The shortening leads to reduction of length of muscle fiber and sarcomeres.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by chemo-mechanical energy conversion","termid":"GO:0014862"}


id: PBO:0055349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2778","termid":"PBO:0055349"}


id: GO:0045935
data:
  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id: GO:0051752
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id: PBO:0082191
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id: GO:0032281
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id: GO:0019078
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id: GO:0036355
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id: GO:0044422
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id: PBO:0045075
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id: PBO:0028577
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id: PBO:0066827
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id: GO:0021569
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id: GO:0042017
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id: FYPO:0008091
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id: FYPO:0002197
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114409,114372,114377,114383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[114621,114615,114614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is viable, and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":7,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_04280","SJAG_02819","SJAG_00514","SJAG_03453","SJAG_03581","SJAG_03048"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","scd1delta","efc25delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","ras1delta"],"synonyms":[{"name":"viable lumpy cell","type":"related"},{"name":"viable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"viable, abnormal cell shape during vegetative growth","type":"exact"}],"termid":"FYPO:0002197","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0098836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cytoskeleton that lies within a dendritic spine. The actin component of this cytoskeleton is involved in spine head remodeling in response to postsynaptic signaling.","definition_xrefs":["PMID:24854120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoskeleton of dendritic spine","termid":"GO:0098836"}


id: PBO:0017676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium ion transmembrane transporter Trk1","termid":"PBO:0017676"}


id: GO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["CL:0000763","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell homeostasis","termid":"GO:0002262"}


id: GO:1990260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter using a mechanism that involves the localization of a transcription factor and initiated in response to the DNA damage checkpoint signaling.","definition_xrefs":["PMID:24006488"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by transcription factor localization involved in response to DNA damage checkpoint signaling (obsolete GO:1990260)","termid":"GO:1990260"}


id: GO:0005805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-Golgi transport vesicle (obsolete GO:0005805)","synonyms":[{"name":"ER-Golgi transport vesicle","type":"exact"}],"termid":"GO:0005805"}


id: PBO:0087440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit g of the mitochondrial F1F0 ATP synthase; reversibly phosphorylated on two residues; unphosphorylated form is required for dimerization of the ATP synthase complex, which in turn determines oligomerization of the complex and the shape of inner membrane cristae","termid":"PBO:0087440"}


id: PR:O13766
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde10 gene.","definition_xrefs":["UniProtKB:O13766","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc metalloprotease mde10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.04c","synonyms":[{"name":"Spom972h-mde10","type":"exact"},{"name":"meiotically up-regulated gene 139 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation protein mde10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13766"}


id: PR:O94465
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.07c","synonyms":[{"name":"Spom972h-cms1","type":"exact"}],"termid":"PR:O94465"}


id: PBO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.7","termid":"PBO:0000395"}


id: PBO:0056260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALT1 paracaspase","termid":"PBO:0056260"}


id: GO:0019797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.7","RHEA:22872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"},{"relation_name":"is_a","term_name":"peptidyl-proline 3-dioxygenase activity","termid":"GO:0031544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"procollagen-proline 3-dioxygenase activity","secondary_identifiers":["MetaCyc:PROCOLLAGEN-PROLINE-3-DIOXYGENASE-RXN","KEGG_REACTION:R03218","Reactome:R-HSA-1980233"],"synonyms":[{"name":"procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"procollagen-proline,2-oxoglutarate 3-dioxygenase activity","type":"related"},{"name":"proline,2-oxoglutarate 3-dioxygenase activity","type":"related"},{"name":"prolyl 3-hydroxylase activity","type":"broad"},{"name":"prolyl-4-hydroxyprolyl-glycyl-peptide, 2-oxoglutarate: oxygen oxidoreductase, 3-hydroxylating activity","type":"related"},{"name":"protocollagen proline 3-hydroxylase activity","type":"related"}],"termid":"GO:0019797"}


id: PBO:0067712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 10","termid":"PBO:0067712"}


id: GO:0002704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"negatively_regulates","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte mediated immunity","synonyms":[{"name":"down regulation of leukocyte mediated immunity","type":"exact"},{"name":"down-regulation of leukocyte mediated immunity","type":"exact"},{"name":"downregulation of leukocyte mediated immunity","type":"exact"},{"name":"inhibition of leukocyte mediated immunity","type":"narrow"},{"name":"negative regulation of immune cell mediated immunity","type":"exact"},{"name":"negative regulation of leucocyte mediated immunity","type":"exact"}],"termid":"GO:0002704"}


id: RO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x anabranch_of y if x is a distributary of y (i.e. it channels a from a larger flow from y) and x ultimately channels the flow back into y.","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anabranch_of","termid":"RO:0002378"}


id: GO:1901195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"positively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"positive regulation of formation of translation preinitiation complex","synonyms":[{"name":"activation of formation of translation pre-initiation complex","type":"exact"},{"name":"activation of formation of translation preinitiation complex","type":"narrow"},{"name":"activation of translation preinitiation complex assembly","type":"exact"},{"name":"positive regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"positive regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"upregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"upregulation of formation of translation preinitiation complex","type":"exact"},{"name":"upregulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901195"}


id: PBO:0042023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 81","termid":"PBO:0042023"}


id: PBO:0086847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative quinone oxidoreductase; overexpression improves ethanol production and acid stress resistance; involved in copper metabolism; similar to Cochliobolus carbonum toxD gene","termid":"PBO:0086847"}


id: PBO:0071054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 56","termid":"PBO:0071054"}


id: PBO:0050788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3B","termid":"PBO:0050788"}


id: PBO:0041829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 2","termid":"PBO:0041829"}


id: PBO:0082871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein; implicated in the membrane insertion of tail-anchored C-terminal single transmembrane domain proteins; may function in transport of glycosylphosphatidylinositol intermediates into the ER lumen; required for normal intracellular sterol distribution; human ARV1, required for normal cholesterol and bile acid homeostasis, can complement yeast arv1 null mutant; human variant causing early onset epileptic encephalopathy is unable to rescue the yeast null","termid":"PBO:0082871"}


id: PBO:0083397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORFs YPR169W-A and YPR170W-B","termid":"PBO:0083397"}


id: GO:0034796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adipate + CoASH = adipyl-CoA + OH-.","definition_xrefs":["UM-BBD_reactionID:r1060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"adipate-CoA ligase activity","termid":"GO:0034796"}


id: GO:0030616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that forms a complex with a phosphorylated pathway-specific mediator. The heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, common-partner cytoplasmic mediator activity (obsolete GO:0030616)","synonyms":[{"name":"TGF-beta receptor, common-partner cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, common-partner cytoplasmic mediator activity","type":"exact"},{"name":"co-SMAD protein","type":"related"},{"name":"common mediator SMAD protein","type":"related"},{"name":"common partner SMAD protein","type":"related"},{"name":"common-mediator SMAD protein","type":"related"},{"name":"common-partner SMAD protein","type":"related"}],"termid":"GO:0030616"}


id: SO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:regulatory_region_ablation","type":"exact"},{"name":"regulatory region ablation","type":"exact"}],"termid":"SO:0001894"}


id: SO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (55-65 nt long) containing highly conserved 5' and 3' ends (16 and 8 nt, respectively) that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_I_RNA","synonyms":[{"name":"class I RNA","type":"exact"}],"termid":"SO:0000990"}


id: PBO:0058726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6854","termid":"PBO:0058726"}


id: PBO:0065545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor 2","termid":"PBO:0065545"}


id: PBO:0047256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 241 member A","termid":"PBO:0047256"}


id: GO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"is_a","term_name":"positive regulation of cell fate determination","termid":"GO:1905935"},{"relation_name":"positively_regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell fate determination","synonyms":[{"name":"activation of mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of mesodermal cell fate determination","type":"exact"},{"name":"upregulation of mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048336"}


id: PBO:0072204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 3","termid":"PBO:0072204"}


id: PBO:0057432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-2","termid":"PBO:0057432"}


id: GO:0061692
data:
  {"annotated_genes":["SJAG_02515","SJAG_01199","SJAG_01216","SJAG_04823","SJAG_04953","SJAG_00141"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90797,95523,100486,104233,112592,113479],"is_not":false,"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of hydrogen peroxide in a cell. These include transport of hydrogen peroxide away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of hydrogen peroxide","termid":"GO:0061691"},{"relation_name":"is_a","term_name":"cellular oxidant detoxification","termid":"GO:0098869"},{"relation_name":"part_of","term_name":"cellular response to hydrogen peroxide","termid":"GO:0070301"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061692","terms_by_termid":{"GO:0061692":null}}


id: PBO:0035748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035748"}


id: FYECO:0000396
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at sub lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ micafungin","termid":"FYECO:0000395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin SLD","termid":"FYECO:0000396"}


id: SO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of one or more sequences of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_collection","synonyms":[{"name":"variant collection","type":"related"}],"termid":"SO:0001507"}


id: FYPO:0007832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes begins later than normal.","definition_xrefs":["PMID:33496728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to cell division site","termid":"FYPO:0003946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to medial cortical node","synonyms":[{"name":"delayed onset of protein localisation to medial cortical node","type":"exact"},{"name":"delayed onset of protein localization to cortical medial dot","type":"exact"},{"name":"delayed onset of protein localization to cytokinetic nodes","type":"related"},{"name":"delayed onset of protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"delayed protein localization to medial cortical node","type":"exact"}],"termid":"FYPO:0007832"}


id: GO:0020003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Membrane-bounded vacuole within a host cell in which a symbiont organism resides. The vacuole membrane is derived from both the host and symbiont.","definition_xrefs":["GOC:jl","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"extracellular membrane-bounded organelle","termid":"GO:0065010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"symbiont-containing vacuole","synonyms":[{"name":"SCV","type":"exact"},{"name":"Salmonella-containing vacuole","type":"narrow"},{"name":"bacterium-containing vacuole","type":"narrow"},{"name":"parasitophorous vacuole","type":"exact"},{"name":"pathogen-occupied vacuole","type":"narrow"}],"termid":"GO:0020003"}


id: GO:0045338
data:
  {"annotated_genes":["SJAG_04307","SJAG_01474","SJAG_04568","SJAG_03352","SJAG_02719","SJAG_00580","SJAG_04499","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75439],"is_not":false,"summary":null,"term":"GO:0045338"},{"annotations":[77437,97380,70839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045337"},{"annotations":[73878,78528,110193,109063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving farnesyl diphosphate, an intermediate in carotenoid, sesquiterpene, squalene and sterol biosynthesis, as well as a substrate in protein farnesylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"farnesyl diphosphate metabolism","type":"exact"}],"termid":"GO:0045338","terms_by_termid":{"GO:0010142":null,"GO:0045337":null,"GO:0045338":null}}


id: GO:0097584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt5p-Pmt2p.","definition_xrefs":["PMID:12551906","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005789","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt2p dimer complex","synonyms":[{"name":"Pmt5p-Pmt2p complex","type":"narrow"}],"termid":"GO:0097584"}


id: PBO:0040632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 1","termid":"PBO:0040632"}


id: PBO:0048964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein A33","termid":"PBO:0048964"}


id: PATO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001077 absolute pressure (obsolete PATO:0001077)","termid":"PATO:0001077"}


id: PBO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein gamma 3","termid":"PBO:0048650"}


id: PR:O94373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp4 gene.","definition_xrefs":["UniProtKB:O94373","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.07","synonyms":[{"name":"Spom972h-atp4","type":"exact"}],"termid":"PR:O94373"}


id: GO:0047273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide = UDP + beta-N-acetyl-D-galactosaminyl-(1->3)-alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide.","definition_xrefs":["EC:2.4.1.79","MetaCyc:2.4.1.79-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:22252","GO:0047226","Reactome:R-HSA-8878914"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide 3III-beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:globotriaosylceramide beta-3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:globotriaosylceramide beta1,3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta-3GalNAc-T1 activity","type":"related"},{"name":"beta3GalNAc-T1","type":"related"},{"name":"galactosylgalactosylglucosylceramide beta-D- activity","type":"related"},{"name":"globoside synthase activity","type":"related"},{"name":"globoside synthetase activity","type":"related"},{"name":"globotriaosylceramide 3-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"globotriosylceramide beta-1,6-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-galactosylgalactosylglucosylceramide acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047273"}


id: PBO:0065301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 8","termid":"PBO:0065301"}


id: GO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric distal convoluted tubule cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell development","termid":"GO:0072140"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell development","synonyms":[{"name":"metanephric distal convoluted tubule cell development","type":"exact"}],"termid":"GO:0072241"}


id: GO:0008245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosomal membrane hydrogen-transporting ATPase (obsolete GO:0008245)","synonyms":[{"name":"V-ATPase","type":"related"},{"name":"lysosomal membrane hydrogen-transporting ATPase","type":"exact"}],"termid":"GO:0008245"}


id: PBO:0085859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YLR108C is not an esssential gene; protein abundance increases in response to DNA replication stress; YLR108C has a paralog, YDR132C, that arose from the whole genome duplication","termid":"PBO:0085859"}


id: GO:1901750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene D4.","definition_xrefs":["UniPathway:UPA00880","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene D4 biosynthetic process","synonyms":[{"name":"leukotriene D4 anabolism","type":"exact"},{"name":"leukotriene D4 biosynthesis","type":"exact"},{"name":"leukotriene D4 formation","type":"exact"},{"name":"leukotriene D4 synthesis","type":"exact"}],"termid":"GO:1901750"}


id: PBO:0070582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 48","termid":"PBO:0070582"}


id: GO:0022841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a potassium ion across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"leak channel activity","termid":"GO:0022840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium ion leak channel activity","termid":"GO:0022841"}


id: PBO:0067442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 564, pseudogene","termid":"PBO:0067442"}


id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: PBO:0082756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; undergoes sumoylation and phosphorylation during mitosis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082756"}


id: PR:O94592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.02","synonyms":[{"name":"Spom972h-SPCC622.02","type":"exact"}],"termid":"PR:O94592"}


id: GO:0102927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-chaconine + UDP-L-rhamnose = H+ + alpha-chaconine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-chaconine rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8883"],"termid":"GO:0102927"}


id: PBO:0059967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 12","termid":"PBO:0059967"}


id: PBO:0005326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Cgi121 (predicted)","termid":"PBO:0005326"}


id: PBO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 12","termid":"PBO:0048091"}


id: PBO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpromazine","termid":"PBO:0030823"}


id: GO:0046637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell differentiation","synonyms":[{"name":"regulation of alpha-beta T cell development","type":"related"},{"name":"regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046637"}


id: GO:0120244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a terminal acetylenic compound, involving a terminal acetylenic compound, a compound which contains a terminal alkyne moiety in which which a carbon of the carbon-carbon triple bond (aka C#C) moiety is attached to a hydrogen atom.","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal acetylenic compound metabolic process","synonyms":[{"name":"terminal alkyne substituted compound metabolic process","type":"exact"},{"name":"terminal alkyne substituted compound metabolism","type":"exact"}],"termid":"GO:0120244"}


id: PBO:0048417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 5","termid":"PBO:0048417"}


id: SO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000086 gene_by_organelle_of_genome (obsolete SO:0000086)","termid":"SO:0000086"}


id: FYPO:0003955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased triglyceride biosynthetic process","synonyms":[{"name":"increased TAG biosynthetic process","type":"exact"},{"name":"increased triacylglycerol biosynthesis","type":"exact"},{"name":"increased triacylglycerol biosynthetic process","type":"exact"},{"name":"increased triglyceride biosynthesis","type":"exact"},{"name":"increased triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"increased triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003955"}


id: SO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TGACTCA, bound by AP-1 and related transcription factors.","definition_xrefs":["PMID:3034432","PMID:1899230","PMID:3125983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP_1_binding_site","synonyms":[{"name":"AP-1 binding site","type":"exact"}],"termid":"SO:0001842"}


id: GO:1903877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 21-deoxycortisol.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:10802282","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"21-deoxycortisol binding","termid":"GO:1903877"}


id: GO:0034256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 71-hydroxychlorophyll(ide) a + NAD(P)+ = chlorophyll(ide) b + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.294","MetaCyc:RXN-7678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chlorophyll(ide) b reductase activity","synonyms":[{"name":"Chl b reductase activity","type":"exact"},{"name":"chlorophyll b reductase activity","type":"exact"},{"name":"chlorophyllide b reductase activity","type":"exact"}],"termid":"GO:0034256"}


id: PBO:0039865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 27","termid":"PBO:0039865"}


id: PBO:0041830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASC3 exon junction complex subunit","termid":"PBO:0041830"}


id: GO:0010720
data:
  {"annotated_genes":["SJAG_02392","SJAG_00514","SJAG_03581","SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85587,90200,91446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[97784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"positively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010720","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: PBO:0068489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 73, pseudogene","termid":"PBO:0068489"}


id: PBO:0040621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAF nuclear assembly factor 1","termid":"PBO:0040621"}


id: PBO:0088444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Sro1 ortholog, syntenic position, intrinsically disordered region","termid":"PBO:0088444"}


id: GO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase c-Src.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-Src complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-SRC complex","type":"narrow"}],"termid":"GO:0070771"}


id: PBO:0055416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2846","termid":"PBO:0055416"}


id: GO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"secondary cell wall biogenesis involved in seed trichome differentiation","synonyms":[{"name":"secondary cell wall biosynthesis involved in seed trichome differentiation","type":"exact"},{"name":"seed trichome secondary wall biosynthesis","type":"related"}],"termid":"GO:0090379"}


id: PBO:0034056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_provides_input_for","termid":"PBO:0034056"}


id: PBO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rothmund-Thomsom syndrome","termid":"PBO:0002374"}


id: FYPO:0000440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to antimycin A. Cells stop growing (and may die) at a concentration of antimycin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to antimycin A","synonyms":[{"name":"hypersensitive to antimycin A","type":"exact"},{"name":"sensitive to antimycin A during mitotic cell cycle","type":"related"},{"name":"sensitive to antimycin A during vegetative growth","type":"exact"}],"termid":"FYPO:0000440"}


id: PBO:0065198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 19","termid":"PBO:0065198"}


id: FYPO:0005283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to inositol starvation.","definition_xrefs":["PMID:19606215","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased viability upon inositol starvation","synonyms":[{"name":"increased cell population viability upon inositol starvation","type":"exact"},{"name":"increased viability during inositol starvation","type":"exact"},{"name":"increased viability upon inositol depletion","type":"exact"},{"name":"increased viability upon inositol deprivation","type":"exact"},{"name":"increased viability upon inositol limitation","type":"exact"}],"termid":"FYPO:0005283"}


id: PBO:0054236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1618","termid":"PBO:0054236"}


id: GO:1901711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of homoserine biosynthetic process","synonyms":[{"name":"down regulation of homoserine anabolism","type":"exact"},{"name":"down regulation of homoserine biosynthesis","type":"exact"},{"name":"down regulation of homoserine biosynthetic process","type":"exact"},{"name":"down regulation of homoserine formation","type":"exact"},{"name":"down regulation of homoserine synthesis","type":"exact"},{"name":"down-regulation of homoserine anabolism","type":"exact"},{"name":"down-regulation of homoserine biosynthesis","type":"exact"},{"name":"down-regulation of homoserine biosynthetic process","type":"exact"},{"name":"down-regulation of homoserine formation","type":"exact"},{"name":"down-regulation of homoserine synthesis","type":"exact"},{"name":"downregulation of homoserine anabolism","type":"exact"},{"name":"downregulation of homoserine biosynthesis","type":"exact"},{"name":"downregulation of homoserine biosynthetic process","type":"exact"},{"name":"downregulation of homoserine formation","type":"exact"},{"name":"downregulation of homoserine synthesis","type":"exact"},{"name":"inhibition of homoserine anabolism","type":"exact"},{"name":"inhibition of homoserine biosynthesis","type":"exact"},{"name":"inhibition of homoserine biosynthetic process","type":"narrow"},{"name":"inhibition of homoserine formation","type":"exact"},{"name":"inhibition of homoserine synthesis","type":"exact"},{"name":"negative regulation of homoserine anabolism","type":"exact"},{"name":"negative regulation of homoserine biosynthesis","type":"exact"},{"name":"negative regulation of homoserine formation","type":"exact"},{"name":"negative regulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901711"}


id: MOD:00240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0235","PubMed:4005040","ChEBI:141495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-lysine","synonyms":[{"name":"(2S,4R)-2,6-diamino-4-hydroxyhexanoic acid","type":"exact"},{"name":"4-hydroxy-L-lysine","type":"exact"},{"name":"4-hydroxylated L-lysine","type":"exact"},{"name":"4HyLys","type":"exact"},{"name":"L-threo-gamma-hydroxylysine","type":"exact"},{"name":"MOD_RES 4-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-gamma-hydroxycaproic acid","type":"exact"}],"termid":"MOD:00240"}


id: GO:1900304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"negatively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of laminaritriose transport","synonyms":[{"name":"down regulation of laminaritriose transport","type":"exact"},{"name":"down-regulation of laminaritriose transport","type":"exact"},{"name":"downregulation of laminaritriose transport","type":"exact"},{"name":"inhibition of laminaritriose transport","type":"narrow"}],"termid":"GO:1900304"}


id: FYPO:0002856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"abnormal glutathione synthase activity","synonyms":[{"name":"abnormal GSH synthase activity","type":"exact"},{"name":"abnormal glutathione synthetase activity","type":"exact"}],"termid":"FYPO:0002856"}


id: PBO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2534","termid":"PBO:0055115"}


id: GO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior induced by frustration and directed against an available target.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"irritable aggressive behavior","synonyms":[{"name":"irritable aggression","type":"exact"}],"termid":"GO:0002123"}


id: PBO:0110041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 4","termid":"PBO:0110041"}


id: GO:0030746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoflavone = S-adenosyl-L-homocysteine + 4'-O-methylisoflavone.","definition_xrefs":["EC:2.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"isoflavone 4'-O-methyltransferase activity","secondary_identifiers":["RHEA:31739","MetaCyc:ISOFLAVONE-4-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"4'-hydroxyisoflavone methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:isoflavone 4'-O-methyltransferase activity","type":"related"},{"name":"isoflavone O-methyltransferase activity","type":"related"},{"name":"isoflavone methyltransferase activity","type":"related"}],"termid":"GO:0030746"}


id: PBO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dependent_on_(obsolete_dependent_on)","termid":"PBO:0034401"}


id: GO:0106243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9alpha-copalyl diphosphate = diphosphate + syn-isopimara-7,15-diene.","definition_xrefs":["GOC:emb","PMID:29315936","RHEA:62188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"syn-isopimara-7,15-diene synthase activity","termid":"GO:0106243"}


id: PBO:0077339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 78","termid":"PBO:0077339"}


id: GO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"positive regulation of epidermis development","termid":"GO:0045684"},{"relation_name":"positively_regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal cell differentiation","synonyms":[{"name":"activation of epidermal cell differentiation","type":"narrow"},{"name":"positive regulation of hypodermal cell differentiation","type":"related"},{"name":"stimulation of epidermal cell differentiation","type":"narrow"},{"name":"up regulation of epidermal cell differentiation","type":"exact"},{"name":"up-regulation of epidermal cell differentiation","type":"exact"},{"name":"upregulation of epidermal cell differentiation","type":"exact"}],"termid":"GO:0045606"}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["GOC:bf","PMID:9550716","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: PBO:0031759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_MCM_complex_assembly","termid":"PBO:0031759"}


id: GO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"positively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granzyme B production","termid":"GO:0071663"}


id: GO:0150004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the dendritic spine neck where the spine arises from the dendritic shaft.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:9030614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine neck","termid":"GO:0044326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine origin","termid":"GO:0150004"}


id: GO:0106258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + L-serine = 1,2-diacyl-sn-glycero-3-phospho-L-serine + choline.","definition_xrefs":["PMID:19014349","RHEA:45088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-serine-phosphatidylcholine phosphatidyltransferase activity","termid":"GO:0106258"}


id: PBO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 2","termid":"PBO:0052584"}


id: PBO:0087865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of the basic leucine zipper (bZIP) family; required for transcription of genes involved in resistance to arsenic compounds; directly binds trivalent arsenic (As(III)) as does K. lactis ortholog, KIYAP8","termid":"PBO:0087865"}


id: GO:1990721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is capable of dephosphorylation of alky, aryl and acyl orthophosphate monoesters and phosphorylated proteins. Optimal activity in acidic environment (pH 4-6). In mammals it consists of a homodimer of ACPP.","definition_xrefs":["PMID:12525165","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete prostatic acid phosphatase complex (obsolete GO:1990721)","synonyms":[{"name":"ACPP homodimer complex","type":"narrow"},{"name":"PAP complex","type":"exact"},{"name":"prostatic acid phosphatase complex","type":"exact"}],"termid":"GO:1990721"}


id: PBO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 21-1","termid":"PBO:0052933"}


id: GO:0031706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a subtype 3 bombesin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"subtype 3 bombesin receptor binding","synonyms":[{"name":"subtype 3 bombesin receptor ligand","type":"narrow"}],"termid":"GO:0031706"}


id: PBO:0054685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2093","termid":"PBO:0054685"}


id: PBO:0056272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2 pseudogene 1","termid":"PBO:0056272"}


id: PBO:0073346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8","termid":"PBO:0073346"}


id: GO:0038163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by thrombopoietin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:19630807","GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"thrombopoietin-mediated signaling pathway","synonyms":[{"name":"THPO signaling pathway","type":"exact"},{"name":"THPO/MPL signaling pathway","type":"exact"},{"name":"thrombopoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038163"}


id: PBO:0050825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN pseudogene 1","termid":"PBO:0050825"}


id: GO:0048460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the flower. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower formation","secondary_identifiers":["GO:0048410"],"termid":"GO:0048460"}


id: PBO:0043648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 7B","termid":"PBO:0043648"}


id: GO:0032101
data:
  {"annotated_genes":["SJAG_04268","SJAG_03048","SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[109150,70546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to external stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032101","terms_by_termid":{"GO:0006808":null,"GO:1904547":null}}


id: GO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-phenylalanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}


id: PBO:0027078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_plasma_membrane,_with_protein_mislocalized_to_cytoplasm,_during_glucose_starvation","termid":"PBO:0027078"}


id: PBO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 20 pseudogene","termid":"PBO:0061960"}


id: GO:0036109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-linolenic acid, an unsaturated omega-6 fatty acid that has the molecular formula C18H32O2.","definition_xrefs":["PMID:15538555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alpha-linolenic acid metabolic process","secondary_identifiers":["Wikipedia:Linoleic_acid"],"synonyms":[{"name":"ALA metabolism","type":"exact"},{"name":"alpha-linolenic acid metabolism","type":"exact"}],"termid":"GO:0036109"}


id: GO:1900193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oocyte maturation.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oocyte maturation","termid":"GO:1900193"}


id: PBO:0053627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 671","termid":"PBO:0053627"}


id: GO:1903579
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75299,72697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP metabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20695849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"negatively_regulates","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ATP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of ATP metabolic process","type":"exact"},{"name":"down regulation of ATP metabolism","type":"exact"},{"name":"down-regulation of ATP metabolic process","type":"exact"},{"name":"down-regulation of ATP metabolism","type":"exact"},{"name":"downregulation of ATP metabolic process","type":"exact"},{"name":"downregulation of ATP metabolism","type":"exact"},{"name":"inhibition of ATP metabolic process","type":"narrow"},{"name":"inhibition of ATP metabolism","type":"narrow"},{"name":"negative regulation of ATP metabolism","type":"exact"}],"termid":"GO:1903579","terms_by_termid":{"GO:0045820":null}}


id: PBO:0065985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1L","termid":"PBO:0065985"}


id: PBO:0041203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blood vessel epicardial substance","termid":"PBO:0041203"}


id: PBO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease, minor transcript isoform Apn1","termid":"PBO:0031912"}


id: GO:0010307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetylglutamate kinase.","definition_xrefs":["PMID:16377628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"acetylglutamate kinase regulator activity","termid":"GO:0010307"}


id: PBO:0084885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization","termid":"PBO:0084885"}


id: PBO:0081545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 461","termid":"PBO:0081545"}


id: PBO:0077697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 1 binding protein 1","termid":"PBO:0077697"}


id: PBO:0087063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L30; involved in pre-rRNA processing in the nucleolus; autoregulates splicing of its transcript; homologous to mammalian ribosomal protein L30, no bacterial homolog","termid":"PBO:0087063"}


id: PBO:0078836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 2-1","termid":"PBO:0078836"}


id: PBO:0052107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNAB1 antisense RNA 1","termid":"PBO:0052107"}


id: PBO:0108952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STBD1 pseudogene 1","termid":"PBO:0108952"}


id: PBO:0056877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence G (pseudogene)","termid":"PBO:0056877"}


id: GO:0009507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast","secondary_identifiers":["Wikipedia:Chloroplast"],"termid":"GO:0009507"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: PBO:0062405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 29 pseudogene","termid":"PBO:0062405"}


id: PBO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Pfa3 (predicted)","termid":"PBO:0003737"}


id: FYPO:0003457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of homocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular homocysteine level","synonyms":[{"name":"increased cellular homocysteine level during mitotic cell cycle","type":"related"},{"name":"increased cellular homocysteine level during vegetative growth","type":"exact"},{"name":"increased homocysteine accumulation","type":"related"}],"termid":"FYPO:0003457"}


id: PBO:0086205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDL027C is not an essential gene","termid":"PBO:0086205"}


id: PBO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_meiosis","termid":"PBO:0036157"}


id: PR:P17609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt2 gene.","definition_xrefs":["UniProtKB:P17609","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.07c","synonyms":[{"name":"SEC4 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt2","type":"exact"}],"termid":"PR:P17609"}


id: PBO:0068681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 62, pseudogene","termid":"PBO:0068681"}


id: PBO:0056716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchyme homeobox 1","termid":"PBO:0056716"}


id: GO:0090517
data:
  {"annotated_genes":["SJAG_02029","SJAG_03256","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105400],"is_not":false,"summary":null,"term":"GO:0090517"},{"annotations":[99323,98291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine transport","termid":"GO:0015819"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-lysine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090456"],"synonyms":[{"name":"lysine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar lysine import","type":"broad"}],"termid":"GO:0090517","terms_by_termid":{"GO:0090517":null,"GO:1901482":null}}


id: PBO:0013097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Sep1","termid":"PBO:0013097"}


id: GO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the phagosome, measured by the concentration of the hydrogen ion, as part of the process of phagosome maturation.","definition_xrefs":["GOC:rjd","PMID:22008230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome reneutralization","synonyms":[{"name":"phagosomal reneutralization","type":"exact"},{"name":"phagosome pH elevation","type":"exact"}],"termid":"GO:0044655"}


id: PBO:0062399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 22 pseudogene","termid":"PBO:0062399"}


id: PATO:0000934
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000934 u v light sensitivity (obsolete PATO:0000934)","termid":"PATO:0000934"}


id: FYPO:0001632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tyrosine level","termid":"FYPO:0001641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar tyrosine level","synonyms":[{"name":"normal level of tyrosine in vacuole","type":"exact"},{"name":"normal vacuolar L-tyrosine level","type":"exact"},{"name":"normal vacuolar tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tyrosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001632"}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: PBO:0078547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 38","termid":"PBO:0078547"}


id: GO:0140318
data:
  {"annotated_genes":["SJAG_05259","SJAG_01879","SJAG_03560","SJAG_04218","SJAG_00175","SJAG_00959","SJAG_04208","SJAG_01597","SJAG_03515","SJAG_02330","SJAG_04996","SJAG_03415","SJAG_01640","SJAG_02077","SJAG_02524","SJAG_04203","SJAG_00687","SJAG_03502","SJAG_02208","SJAG_01949","SJAG_01435","SJAG_03358","SJAG_00373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84423,86109,88434,111534],"is_not":false,"summary":null,"term":"GO:0140318"},{"annotations":[111574,96541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140567"},{"annotations":[72879,73283,72906,77435,70071,101614,93627,73609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[103018,100632,86594,92470,95842,102996,98767,107143,95074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific protein and delivering it to a specific cellular location.","definition_xrefs":["PMID:18706423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00687":null,"SJAG_00959":null,"SJAG_01435":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02524":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04203":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9662747","Reactome:R-HSA-9662818","Reactome:R-HSA-2248891"],"synonyms":[{"name":"protein carrier activity","type":"related"},{"name":"protein transport chaperone","type":"related"}],"termid":"GO:0140318","terms_by_termid":{"GO:0008320":null,"GO:0015450":null,"GO:0140318":null,"GO:0140567":null}}


id: PBO:0063147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 1, processing body mRNA decay factor","termid":"PBO:0063147"}


id: PATO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and mid-line surface of an organism relative to another entity.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posteromedial to","termid":"PATO:0002449"}


id: GO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + amino acid(out/in) = ADP + phosphate + amino acid(in/out).","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type amino acid transporter activity","secondary_identifiers":["GO:0032520","GO:0032518"],"synonyms":[{"name":"ATP-dependent amino acid transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled amino acid transmembrane transporter activity","type":"related"},{"name":"amino acid ABC transporter","type":"narrow"},{"name":"amino acid-exporting ATPase activity","type":"related"},{"name":"amino acid-importing ATPase activity","type":"related"},{"name":"amino acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015424"}


id: GO:0061952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the midbody, the cytoplasmic bridge that connects the two prospective daughter cells, is severed at the end of mitotic cytokinesis, resulting in two separate daughter cells.","definition_xrefs":["PMID:29903934","PMID:12737809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"midbody abscission","synonyms":[{"name":"cell separation during cytokinesis","type":"exact"},{"name":"cytokinetic abscission","type":"exact"}],"termid":"GO:0061952"}


id: PBO:0048679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliomedin","termid":"PBO:0048679"}


id: GO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"},{"relation_name":"part_of","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}


id: GO:0071389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mineralocorticoid stimulus. Mineralocorticoids are hormonal C21 corticosteroids synthesized from cholesterol and characterized by their similarity to aldosterone. Mineralocorticoids act primarily on water and electrolyte balance.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"}


id: GO:0042659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the adoption of a specific fate by a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate specification","termid":"GO:0042659"}


id: PBO:0073339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 1","termid":"PBO:0073339"}


id: PBO:0060281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 15","termid":"PBO:0060281"}


id: PATO:0001079
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001079 absolute work (obsolete PATO:0001079)","termid":"PATO:0001079"}


id: GO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The guanylylation of peptidyl-lysine to form peptidyl-N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["RESID:AA0228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein guanylylation","termid":"GO:0018260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine guanylylation","termid":"GO:0018261"}


id: SO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The ends of a DNA loop where the two strands of DNA are held in close physical proximity. During interphase the anchors of DNA loops are convergently oriented CTCF binding sites.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"},{"relation_name":"part_of","term_name":"DNA_loop","termid":"SO:0002307"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop_anchor","synonyms":[{"name":"DNA loop anchor","type":"exact"}],"termid":"SO:0002308"}


id: PBO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metachromatic leukodystrophy","termid":"PBO:0025483"}


id: MOD:00520
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)dHex(1)","type":"related"},{"name":"Hex1HexNAc2dHex1","type":"related"}],"termid":"MOD:00520"}


id: GO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at the terminal bond of the motif: Asp-Xaa-Xaa-Asp-Xaa. Enzymes with this function are members of the peptidase family C14 and they appear to function in the inactivation of proteins involved in cellular repair and homeostasis during the effector stage of apoptosis.","definition_xrefs":["ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-3 activity (obsolete GO:0004208)","synonyms":[{"name":"caspase-3 activity","type":"exact"}],"termid":"GO:0004208"}


id: PBO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 1","termid":"PBO:0043922"}


id: PBO:0029325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA","termid":"PBO:0029325"}


id: PBO:0088746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2","termid":"PBO:0088746"}


id: GO:1905272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GO_REF:0000059","PMID:21106936","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ligase activity","termid":"GO:0051352"},{"relation_name":"is_a","term_name":"regulation of proton-transporting ATP synthase activity, rotational mechanism","termid":"GO:1905271"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"down regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"down regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"down regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"down regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down-regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"down-regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"down-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down-regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"down-regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"downregulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"downregulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"downregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"downregulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"downregulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"inhibition of H+-transporting ATP synthase activity","type":"narrow"},{"name":"inhibition of hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"inhibition of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"inhibition of hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"inhibition of proton-transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"negative regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"negative regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"negative regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"negative regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:1905272"}


id: PATO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coordination","synonyms":[{"name":"high coordination","type":"exact"}],"termid":"PATO:0001859"}


id: PBO:0080360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 15 pseudogene","termid":"PBO:0080360"}


id: GO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular inhibitory ligand has been bound by the channel complex or one of its constituent parts. Inhibitory ligands, such as GABA or glycine, open chloride-selective channels.","definition_xrefs":["GOC:mah","ISBN:0323037070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"inhibitory extracellular ligand-gated monoatomic ion channel activity","synonyms":[{"name":"inhibitory extracellular ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0005237"}


id: RO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shares_ancestor_with","termid":"RO:0002158"}


id: PBO:0050160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 16","termid":"PBO:0050160"}


id: PBO:0083058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate reductase involved in tetrahydrofolate biosynthesis; required for respiratory metabolism; mutation is functionally complemented by human DHFR","termid":"PBO:0083058"}


id: PBO:0062901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase NAD binding domain containing 1","termid":"PBO:0062901"}


id: PATO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000465 marked (obsolete PATO:0000465)","termid":"PATO:0000465"}


id: GO:0008977
data:
  {"annotated_genes":["SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110099],"is_not":false,"summary":null,"term":"GO:0008977"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + prephenate = (4-hydroxyphenyl)pyruvate + CO2 + NADH.","definition_xrefs":["RHEA:13869","EC:1.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prephenate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01728","MetaCyc:PREPHENATEDEHYDROG-RXN"],"synonyms":[{"name":"chorismate mutase--prephenate dehydrogenase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"},{"name":"prephenate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0008977","terms_by_termid":{"GO:0008977":null}}


id: PBO:0089559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef1","termid":"PBO:0089559"}


id: PBO:0062409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 36 pseudogene","termid":"PBO:0062409"}


id: FYPO:0001601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered level of substance in vacuole","synonyms":[{"name":"abnormal vacuolar level of substance","type":"exact"},{"name":"abnormal level of substance in vacuole","type":"exact"},{"name":"abnormal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"altered level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"altered vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001601"}


id: PBO:0040225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 1 pseudogene 1","termid":"PBO:0040225"}


id: PBO:0041732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IV","termid":"PBO:0041732"}


id: GO:0035171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemocyte precursor cell acquires the specialized features of a lamellocyte. Lamellocytes are a hemocyte lineage that exists only in larvae, but are seldom observed in healthy animals. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lamellocyte differentiation","synonyms":[{"name":"lamellocyte cell differentiation","type":"exact"}],"termid":"GO:0035171"}


id: PBO:0081559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 483","termid":"PBO:0081559"}


id: SO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An array includes two or more genes, or two or more gene subarrays, contiguously arranged where the individual genes, or subarrays, are either identical in sequence, or essentially so.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array","synonyms":[{"name":"gene array","type":"exact"}],"termid":"SO:0005851"}


id: PBO:0062926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y13","termid":"PBO:0062926"}


id: FYPO:0007162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of karyogamy involved in conjugation with cellular fusion is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"increased duration of nuclear fusion during mating","synonyms":[{"name":"increased duration of karyogamy","type":"exact"},{"name":"increased duration of karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"prolonged nuclear fusion during mating","type":"exact"}],"termid":"FYPO:0007162"}


id: FYPO:0005609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs over a smaller portion of the chromosome than normal in regions surrounding double-strand DNA breaks. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during vegetative growth","synonyms":[{"name":"decreased spatial extent of histone H2B conserved C-terminal lysine ubiquitination at double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at DSB during vegetative growth","type":"exact"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during mitotic cell cycle during vegetative growth","type":"related"},{"name":"decreased spatial extent of histone H2B-K119 ubiquitination at site of double-strand break during vegetative growth","type":"exact"},{"name":"reduced spatial extent of histone H2B-K119 ubiquitination at double-strand break during vegetative growth","type":"exact"}],"termid":"FYPO:0005609"}


id: PBO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec24","termid":"PBO:0002795"}


id: PBO:0054598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2002","termid":"PBO:0054598"}


id: GO:0005193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete major urinary protein (obsolete GO:0005193)","synonyms":[{"name":"major urinary protein","type":"exact"}],"termid":"GO:0005193"}


id: PBO:0076647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 3","termid":"PBO:0076647"}


id: PBO:0056263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAMDC2 antisense RNA 1","termid":"PBO:0056263"}


id: GO:0009751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salicylic acid","synonyms":[{"name":"response to salicylate","type":"exact"},{"name":"response to salicylic acid stimulus","type":"exact"}],"termid":"GO:0009751"}


id: PBO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 30","termid":"PBO:0052516"}


id: GO:0016011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"dystroglycan complex","termid":"GO:0016011"}


id: PBO:0073678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 1","termid":"PBO:0073678"}


id: GO:0010004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A complex and coordinated series of cellular movements, including germ band extension, that occurs at the end of cleavage during embryonic development. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation with mouth forming first","termid":"GO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation involving germ band extension","termid":"GO:0010004"}


id: GO:0008924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + a quinone = oxaloacetate + a quinol.","definition_xrefs":["RHEA:46012","PMID:234747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.4","MetaCyc:MALATE-DEHYDROGENASE-ACCEPTOR-RXN"],"synonyms":[{"name":"(S)-malate:(quinone) oxidoreductase activity","type":"related"},{"name":"(S)-malate:quinone oxidoreductase activity","type":"related"},{"name":"FAD-dependent malate dehydrogenase activity","type":"related"},{"name":"MQO activity","type":"broad"}],"termid":"GO:0008924"}


id: PBO:0029201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amphotericin_B","termid":"PBO:0029201"}


id: PBO:0057132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 216a","termid":"PBO:0057132"}


id: PBO:0042101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 172","termid":"PBO:0042101"}


id: GO:0008467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate. The [heparan sulfate]-glucosamine 3-sulfate has a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S.","definition_xrefs":["EC:2.8.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity","secondary_identifiers":["Reactome:R-HSA-2076611","MetaCyc:2.8.2.23-RXN","Reactome:R-HSA-2076383"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine 3-sulfotransferase","type":"broad"},{"name":"3'-phosphoadenylyl-sulfate:heparin-glucosamine 3-O-sulfotransferase activity","type":"related"},{"name":"3-OST-1 activity","type":"related"},{"name":"glucosaminyl 3-O-sulfotransferase activity","type":"related"},{"name":"heparan sulfate D-glucosaminyl 3-O-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine 3-O-sulfotransferase activity","type":"related"},{"name":"heparin-glucosamine 3-O-sulphotransferase activity","type":"related"},{"name":"isoform/isozyme 1 (3-OST-1, HS3ST1)","type":"related"}],"termid":"GO:0008467"}


id: GO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism reduces the indole acetic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ml","PMID:18056646"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of indole acetic acid levels in host (obsolete GO:0044846)","synonyms":[{"name":"negative regulation by symbiont of IAA levels in host","type":"exact"},{"name":"negative regulation by symbiont of auxin levels in host","type":"exact"}],"termid":"GO:0044846"}


id: PBO:0068632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 12, pseudogene","termid":"PBO:0068632"}


id: GO:1904082
data:
  {"annotated_genes":["SJAG_04714","SJAG_03970","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84208],"is_not":false,"summary":null,"term":"GO:1904082"},{"annotations":[83873],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[91140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which pyrimidine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound transmembrane transport","termid":"GO:0072531"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904082","terms_by_termid":{"GO:0098721":null,"GO:1904082":null,"GO:1905530":null}}


id: PBO:0081372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 211","termid":"PBO:0081372"}


id: PBO:0079625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N like (gene/pseudogene)","termid":"PBO:0079625"}


id: PBO:0054616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2021","termid":"PBO:0054616"}


id: PBO:0043234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 5","termid":"PBO:0043234"}


id: PATO:0001450
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of extracellular fluid.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edematous","synonyms":[{"name":"edema","type":"narrow"},{"name":"edemic","type":"exact"},{"name":"oedema","type":"narrow"},{"name":"oedematous","type":"exact"},{"name":"oedemic","type":"exact"}],"termid":"PATO:0001450"}


id: GO:0046712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"GDP catabolic process","synonyms":[{"name":"GDP breakdown","type":"exact"},{"name":"GDP catabolism","type":"exact"},{"name":"GDP degradation","type":"exact"}],"termid":"GO:0046712"}


id: PBO:0076841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 2","termid":"PBO:0076841"}


id: PR:O14270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhl1 gene.","definition_xrefs":["UniProtKB:O14270","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.08","synonyms":[{"name":"Spom972h-fhl1","type":"exact"}],"termid":"PR:O14270"}


id: PR:P40977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.11","secondary_identifiers":["UniProtKB:P40977"],"synonyms":[{"name":"PLC-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLCD4","type":"exact"},{"name":"phospholipase C-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40977"}


id: GO:0032342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone biosynthetic process","termid":"GO:0006700"},{"relation_name":"is_a","term_name":"mineralocorticoid biosynthetic process","termid":"GO:0006705"},{"relation_name":"is_a","term_name":"aldosterone metabolic process","termid":"GO:0032341"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"aldosterone biosynthetic process","termid":"GO:0032342"}


id: GO:0007506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"},{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadal mesoderm development","termid":"GO:0007506"}


id: PBO:0041232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 54","termid":"PBO:0041232"}


id: GO:1900035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"negatively_regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to heat","synonyms":[{"name":"down regulation of cellular response to heat","type":"related"},{"name":"down regulation of cellular response to heat stress","type":"exact"},{"name":"down-regulation of cellular response to heat","type":"related"},{"name":"down-regulation of cellular response to heat stress","type":"exact"},{"name":"downregulation of cellular response to heat","type":"related"},{"name":"downregulation of cellular response to heat stress","type":"exact"},{"name":"inhibition of cellular response to heat","type":"related"},{"name":"inhibition of cellular response to heat stress","type":"exact"},{"name":"negative regulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900035"}


id: GO:0032900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurotrophin production","synonyms":[{"name":"down regulation of neurotrophin production","type":"exact"},{"name":"down-regulation of neurotrophin production","type":"exact"},{"name":"downregulation of neurotrophin production","type":"exact"},{"name":"inhibition of neurotrophin production","type":"narrow"}],"termid":"GO:0032900"}


id: GO:0004694
data:
  {"annotated_genes":["SJAG_00169","SJAG_01942","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74562,88164,105063],"is_not":false,"summary":null,"term":"GO:0004694"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [eukaryotic translation initiation factor 2 alpha subunit] = ADP + [eukaryotic translation initiation factor 2 alpha subunit] phosphate.","definition_xrefs":["InterPro:IPR015516","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0140096","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2alpha kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0004694","terms_by_termid":{"GO:0004694":null}}


id: PBO:0066834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 133","termid":"PBO:0066834"}


id: PBO:0046517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lipid raft associated 1","termid":"PBO:0046517"}


id: PBO:0075545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm antigen with calponin homology and coiled-coil domains 1 like","termid":"PBO:0075545"}


id: PBO:0058848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8077","termid":"PBO:0058848"}


id: PBO:0109397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 24, pseudogene","termid":"PBO:0109397"}


id: CHEBI:16284
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dATP","termid":"CHEBI:16284"}


id: GO:0070340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a bacterial lipopeptide stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["PMID:12077222","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of bacterial lipoprotein","termid":"GO:0042494"},{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of bacterial lipopeptide","termid":"GO:0070340"}


id: PBO:0061231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2 nucleolar protein","termid":"PBO:0061231"}


id: PBO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase (predicted)","termid":"PBO:0001862"}


id: PBO:0053091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2C","termid":"PBO:0053091"}


id: PBO:0065094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 1","termid":"PBO:0065094"}


id: GO:0035114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism.","definition_xrefs":["ISBN:0582227089","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"imaginal disc-derived appendage development","termid":"GO:0048737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"}


id: PBO:0070278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 19","termid":"PBO:0070278"}


id: PATO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's penetrating or permeating another substance or area.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrative","synonyms":[{"name":"infiltrating","type":"exact"}],"termid":"PATO:0002103"}


id: PBO:0084643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein involved in microtubule organization; involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins","termid":"PBO:0084643"}


id: PBO:0057740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1470","termid":"PBO:0057740"}


id: GO:0031168
data:
  {"annotated_genes":["SJAG_04032","SJAG_04031","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89732,89740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[89697],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ferrichrome. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00792":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferrichrome metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferrichrome metabolism","type":"exact"}],"termid":"GO:0031168","terms_by_termid":{"GO:0031169":null,"GO:1905569":null}}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: PBO:0052001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAZF1 antisense RNA 1","termid":"PBO:0052001"}


id: PBO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YGR079W is not an essential gene","termid":"PBO:0086029"}


id: PBO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein","termid":"PBO:0000124"}


id: GO:0048236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of plant spores derived from the products of meiosis. The spore gives rise to gametophytes.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"is_a","term_name":"meiotic cell cycle","termid":"GO:0051321"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"plant-type sporogenesis","synonyms":[{"name":"plant spore formation","type":"exact"}],"termid":"GO:0048236"}


id: GO:1902053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23368997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of neosartoricin biosynthetic process","synonyms":[{"name":"regulation of neosartoricin anabolism","type":"exact"},{"name":"regulation of neosartoricin biosynthesis","type":"exact"},{"name":"regulation of neosartoricin formation","type":"exact"},{"name":"regulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902053"}


id: PBO:0077739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin XB","termid":"PBO:0077739"}


id: PBO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 151 member B","termid":"PBO:0047100"}


id: PBO:0029389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029389"}


id: PBO:0003485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two Cft2/polyadenylation factor CPSF-73 (predicted)","termid":"PBO:0003485"}


id: FYPO:0006647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA/RNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}


id: PBO:0062060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily X member 1 pseudogene","termid":"PBO:0062060"}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: PBO:0054324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1717","termid":"PBO:0054324"}


id: FYPO:0006338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are located near the cell tips (instead of at the midpoint of the long axis of each daughter cell) during telophase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:15937127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during mitotic telophase","termid":"FYPO:0009105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"nucleus mislocalized towards cell tip during mitotic telophase","synonyms":[{"name":"nuclear displacement towards cell tip during mitotic telophase","type":"exact"},{"name":"nucleus displaced towards cell tip during mitotic telophase","type":"exact"},{"name":"nucleus mislocalised to cell tip during mitotic telophase","type":"exact"},{"name":"nucleus mislocalized towards cell end during mitotic telophase","type":"exact"},{"name":"nucleus mislocalized towards cell tip during mitotic telophase during mitotic cell cycle","type":"related"},{"name":"nucleus mislocalized towards cell tip during mitotic telophase during vegetative growth","type":"exact"},{"name":"telophase nucleus mislocalized to cell tip","type":"exact"}],"termid":"FYPO:0006338"}


id: GO:0000170
data:
  {"annotated_genes":["SJAG_04913","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72286,87473],"is_not":false,"summary":null,"term":"GO:0000170"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of sphingolipid long chain bases.","definition_xrefs":["PMID:9556590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sphingosine hydroxylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428260"],"termid":"GO:0000170","terms_by_termid":{"GO:0000170":null}}


id: PBO:0059758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 32","termid":"PBO:0059758"}


id: FYPO:0005682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"},{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule shrinkage during vegetative growth","type":"related"},{"name":"reduced microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005682"}


id: PBO:0027882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_dimethylation","termid":"PBO:0027882"}


id: FYPO:0006018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer nuclear pore complexes than normal.","definition_xrefs":["PMID:28242692","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased nuclear pore density","synonyms":[{"name":"decreased NPC density","type":"exact"},{"name":"decreased nuclear pore complex density","type":"exact"},{"name":"decreased nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"decreased nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in decreased number","type":"exact"},{"name":"nuclear pores present in decreased number","type":"exact"},{"name":"reduced nuclear pore density","type":"exact"}],"termid":"FYPO:0006018"}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_02908","SJAG_05373","SJAG_01648","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73705,84322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[72651,92713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016788","GO:0004527","GO:0140097","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: PBO:0017884
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FPR1","termid":"PBO:0017884"}


id: PBO:0083743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the outer kinetochore MIND complex; joins kinetochore subunits contacting DNA to those contacting microtubules; phosphorylation promotes interaction between outer and inner kinetochore proteins; kinetochore receptor for monopolin, via interaction with Csm1p; essential for both meiotic and mitotic chromosome segregation; MIND complex consists of Mtw1p, Nnf1p, Nsl1p and Dsn1p; phosphorylated by monopolin subunit, Hrr25p and Aurora kinase, Ipl1p; modified by sumoylation","termid":"PBO:0083743"}


id: PBO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_diglyceride_level","termid":"PBO:0034437"}


id: GO:1903387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"positively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of homophilic cell adhesion","synonyms":[{"name":"activation of homophilic cell adhesion","type":"narrow"},{"name":"up regulation of homophilic cell adhesion","type":"exact"},{"name":"up-regulation of homophilic cell adhesion","type":"exact"},{"name":"upregulation of homophilic cell adhesion","type":"exact"}],"termid":"GO:1903387"}


id: GO:0035629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Addition of a carbohydrate or carbohydrate derivative unit via a nitrogen (N) atom of the N-terminal amino acid of a protein.","definition_xrefs":["GOC:bf","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation","termid":"GO:0006487"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"N-terminal protein amino acid N-linked glycosylation","termid":"GO:0035629"}


id: PR:O14178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl40 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L40, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.02c","synonyms":[{"name":"Spom972h-mrpl40","type":"exact"}],"termid":"PR:O14178"}


id: PBO:0051208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-39","termid":"PBO:0051208"}


id: PBO:0055808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 3","termid":"PBO:0055808"}


id: PBO:0034638
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_cell_surface_glycoprotein_gene_mRNA_during_vegetative_growth","termid":"PBO:0034638"}


id: PBO:0081945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 1","termid":"PBO:0081945"}


id: GO:1900649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"regulation of dehydroaustinol anabolism","type":"exact"},{"name":"regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"regulation of dehydroaustinol formation","type":"exact"},{"name":"regulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900649"}


id: PBO:0086292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in ER delivery of tail-anchored membrane proteins; interacts with Sgt2p; binds to the TRC complex, which inserts proteins into the ER membrane; interacts with Msn5p karyopherin; YBR137W is not an essential gene","termid":"PBO:0086292"}


id: GO:0072049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the comma-shaped body is generated and organized. The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"comma-shaped body morphogenesis","termid":"GO:0072049"}


id: PBO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc1","termid":"PBO:0003164"}


id: PBO:0030702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030702"}


id: GO:0060968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene silencing (obsolete GO:0060968)","termid":"GO:0060968"}


id: GO:0016353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamate susceptibility/resistance (obsolete GO:0016353)","synonyms":[{"name":"carbamate susceptibility/resistance","type":"exact"}],"termid":"GO:0016353"}


id: PBO:0029342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_polycistronic_RNA_precursors","termid":"PBO:0029342"}


id: PBO:0040315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 10","termid":"PBO:0040315"}


id: PBO:0087308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small heat shock protein (sHSP) with chaperone activity; forms barrel-shaped oligomers that suppress unfolded protein aggregation; involved in cytoskeleton reorganization after heat shock; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0087308"}


id: PBO:0072624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B2","termid":"PBO:0072624"}


id: GO:0098061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virus contained within the capsid shell, and usually containing the viral genome and accessory proteins.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, internal space","synonyms":[{"name":"internal head protein","type":"exact"}],"termid":"GO:0098061"}


id: GO:0004449
data:
  {"annotated_genes":["SJAG_00502"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70730],"is_not":false,"summary":null,"term":"GO:0004449"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH.","definition_xrefs":["RHEA:23632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ISOCITRATE-DEHYDROGENASE-NAD+-RXN","Reactome:R-HSA-70967","EC:1.1.1.41"],"synonyms":[{"name":"NAD dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitric dehydrogenase activity","type":"exact"},{"name":"NAD-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NAD) activity","type":"exact"},{"name":"isocitrate:NAD+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"nicotinamide adenine dinucleotide isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004449","terms_by_termid":{"GO:0004449":null}}


id: GO:0120248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["DOI:10.1007/978-1-4615-4913-0_3","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound catabolic process","synonyms":[{"name":"alkyne substituted compound breakdown","type":"exact"},{"name":"alkyne substituted compound catabolic process","type":"exact"},{"name":"alkyne substituted compound catabolism","type":"exact"},{"name":"alkyne substituted compound degradation","type":"exact"}],"termid":"GO:0120248"}


id: PBO:0065587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 3","termid":"PBO:0065587"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: GO:0070373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:add","ISBN:0121245462","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"negatively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"down regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"down-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"downregulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"inhibition of ERK1 and ERK2 cascade","type":"narrow"},{"name":"negative regulation of ERK cascade","type":"broad"},{"name":"negative regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"negative regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"negative regulation of ERK1 cascade","type":"narrow"},{"name":"negative regulation of ERK1/2 cascade","type":"exact"},{"name":"negative regulation of ERK2 cascade","type":"narrow"},{"name":"negative regulation of MAPK1 cascade","type":"narrow"},{"name":"negative regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070373"}


id: PBO:0042530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 pseudogene 1","termid":"PBO:0042530"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: MOD:00992
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:78","PubMed:18767873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-glycerol ester","termid":"MOD:00992"}


id: PBO:0086492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative peroxisomal membrane protein; required for import of peroxisomal proteins; functionally complements a Pichia pastoris pex22 mutation","termid":"PBO:0086492"}


id: GO:0048734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the proboscis are generated and organized. The proboscis is the trunk-like extension of the mouthparts on the adult head.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"proboscis development","termid":"GO:0048728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis morphogenesis","termid":"GO:0048734"}


id: PBO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 5","termid":"PBO:0048714"}


id: PBO:0042035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC88C divergent transcript","termid":"PBO:0042035"}


id: PBO:0003866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Qcr1 (predicted)","termid":"PBO:0003866"}


id: PBO:0074745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105A","termid":"PBO:0074745"}


id: GO:0030031
data:
  {"annotated_genes":["SJAG_02700","SJAG_03453","SJAG_00514","SJAG_01993","SJAG_01894","SJAG_02989","SJAG_01794","SJAG_02379","SJAG_04509","SJAG_01943","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94454,109628,93856,88158,94533,84035],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[89114,83683,86543,85591,106709],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell projection biogenesis","type":"related"},{"name":"formation of a cell surface projection","type":"exact"}],"termid":"GO:0030031","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: PBO:0048104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FtsJ RNA 2'-O-methyltransferase 3","termid":"PBO:0048104"}


id: GO:1990439
data:
  {"annotated_genes":["SJAG_03893","SJAG_03185"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91574,112317],"is_not":false,"summary":null,"term":"GO:1990439"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase threonine phosphate + H2O = MAP kinase threonine + phosphate and MAP kinase serine phosphate + H2O = MAP kinase serine + phosphate.","definition_xrefs":["PMID:10398679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03185":null,"SJAG_03893":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0004721","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"MAP kinase serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990439","terms_by_termid":{"GO:1990439":null}}


id: GO:1990693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi cis cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:16038056","GOC:bhm","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi cis cisterna membrane (obsolete GO:1990693)","synonyms":[{"name":"intrinsic component of cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990693"}


id: PBO:0068741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 4, pseudogene","termid":"PBO:0068741"}


id: PATO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000160 relative incidence (obsolete PATO:0000160)","termid":"PATO:0000160"}


id: PBO:0110371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABRA6 antisense RNA 1","termid":"PBO:0110371"}


id: PBO:0076651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX5 antisense RNA 1","termid":"PBO:0076651"}


id: PBO:0040608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAH domain and coiled-coil containing 1","termid":"PBO:0040608"}


id: GO:0009252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"},{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"peptidoglycan biosynthetic process","secondary_identifiers":["GO:0009285"],"synonyms":[{"name":"murein biosynthesis","type":"exact"},{"name":"murein biosynthetic process","type":"exact"},{"name":"peptidoglycan anabolism","type":"exact"},{"name":"peptidoglycan biosynthesis","type":"exact"},{"name":"peptidoglycan formation","type":"exact"},{"name":"peptidoglycan synthesis","type":"exact"}],"termid":"GO:0009252"}


id: PBO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 5","termid":"PBO:0051405"}


id: PBO:0063886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGO antisense RNA 1","termid":"PBO:0063886"}


id: PBO:0081968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 2","termid":"PBO:0081968"}


id: SO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the structural change, a translocation, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_translocation","synonyms":[{"name":"feature translocation","type":"exact"}],"termid":"SO:0001881"}


id: PBO:0064669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 4","termid":"PBO:0064669"}


id: GO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzyl isothiocyanate = benzyl thiocyanate.","definition_xrefs":["EC:5.99.1.1","RHEA:10004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"thiocyanate isomerase activity","secondary_identifiers":["KEGG_REACTION:R04010","MetaCyc:THIOCYANATE-ISOMERASE-RXN"],"synonyms":[{"name":"benzyl-thiocyanate isomerase activity","type":"related"},{"name":"isothiocyanate isomerase activity","type":"related"}],"termid":"GO:0050335"}


id: MOD:01804
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a glycosylphosphate through a phosphodiester bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphorylated residue","termid":"MOD:01804"}


id: FYPO:0007441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to endoplasmic reticulum-plasma membrane contact sites is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum-plasma membrane contact site","synonyms":[{"name":"normal protein localization to ER-plasma membrane contact site","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum-plasma membrane contact site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endoplasmic reticulum-plasma membrane contact site during vegetative growth","type":"exact"}],"termid":"FYPO:0007441"}


id: PBO:0073040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide, CUB domain and EGF like domain containing 3","termid":"PBO:0073040"}


id: GO:1902566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil activation","termid":"GO:1902566"}


id: PBO:0075708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2B","termid":"PBO:0075708"}


id: PBO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression repressed by glucose","termid":"PBO:0000390"}


id: PBO:0068870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 110, pseudogene","termid":"PBO:0068870"}


id: GO:0005815
data:
  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id: FYPO:0002681
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id: GO:0035374
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chondroitin sulfate, a glycosaminoglycan made up of two alternating monosaccharides: D-glucuronic acid (GlcA) and N-acetyl-D-galactosamine (GalNAc).","definition_xrefs":["GOC:kmv","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chondroitin sulfate binding","termid":"GO:0035374"}


id: PBO:0028983
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_acid_phosphatase_activity","termid":"PBO:0028983"}


id: PBO:0058195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4488","termid":"PBO:0058195"}


id: GO:0050075
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id: GO:1990928
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id: PBO:0071480
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 21","termid":"PBO:0071480"}


id: GO:0090114
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id: RO:0002578
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  regulates the kinase activity (P2) of protein B then P1 directly regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"RO:0002412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","termid":"RO:0002578"}


id: PBO:0045110
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylglycine dehydrogenase","termid":"PBO:0045110"}


id: GO:1905264
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving blasticidin S.","definition_xrefs":["Wikipedia:Blasticidin_S","GOC:pr","GO_REF:0000068","GOC:TermGenie","PMID:23874663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"blasticidin S metabolic process","synonyms":[{"name":"blasticidin S metabolism","type":"exact"}],"termid":"GO:1905264"}


id: FYPO:0005647
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the kinetochore is divided into two or more parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology","termid":"FYPO:0005646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"split kinetochore","termid":"FYPO:0005647"}


id: PBO:0040384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 2","termid":"PBO:0040384"}


id: PBO:0051177
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-65 (pseudogene)","termid":"PBO:0051177"}


id: PBO:0089003
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar phytochelatin and glutathione S-conjugate ABC family transmembrane transporter Abc2","termid":"PBO:0089003"}


id: PBO:0073703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI proto-oncogene","termid":"PBO:0073703"}


id: PBO:0046352
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 10","termid":"PBO:0046352"}


id: GO:0070402
data:
  {"annotated_genes":["SJAG_03476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73766],"is_not":false,"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NADP binding","termid":"GO:0050661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NADPH binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NADP (reduced) binding","type":"exact"},{"name":"reduced NADP binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0070402","terms_by_termid":{"GO:0070402":null}}


id: GO:0032244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"positively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of nucleoside transport","synonyms":[{"name":"activation of nucleoside transport","type":"narrow"},{"name":"stimulation of nucleoside transport","type":"narrow"},{"name":"up regulation of nucleoside transport","type":"exact"},{"name":"up-regulation of nucleoside transport","type":"exact"},{"name":"upregulation of nucleoside transport","type":"exact"}],"termid":"GO:0032244"}


id: PBO:0091391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human HAPSTR1 ortholog, stress response protein","termid":"PBO:0091391"}


id: PBO:0091276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type Cyclin Pombe","termid":"PBO:0091276"}


id: PBO:0070917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 25","termid":"PBO:0070917"}


id: SO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type II: A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees > phi > -20 degrees, +80 degrees > psi > +180 degrees. Residue(i+2): +20 degrees > phi > +140 degrees, -40 degrees > psi > +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_left_handed_type_two","secondary_identifiers":["BS:00213"],"synonyms":[{"name":"beta turn left handed type two","type":"exact"},{"name":"beta_turn_iil","type":"exact"},{"name":"type II' beta turn","type":"exact"},{"name":"type II' turn","type":"exact"}],"termid":"SO:0001135"}


id: PBO:0046906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member G","termid":"PBO:0046906"}


id: PBO:0067091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 127, pseudogene","termid":"PBO:0067091"}


id: GO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of cells in the inner cell mass.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cellular morphogenesis","termid":"GO:0001828"}


id: PBO:0067087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 123, pseudogene","termid":"PBO:0067087"}


id: FYPO:0001145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man9GlcNAc2 measured in a cell is higher than normal. Man9GlcNAc2 is any N-glycan that consists of a branched undecasaccharide consisting of nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:59579","PMID:12686557","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased Man9GlcNAc level","synonyms":[{"name":"increased Man9GlcNAc accumulation","type":"related"},{"name":"increased Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man9GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man9GlcNAc2 level","type":"exact"},{"name":"increased cellular Man9GlcNAc level","type":"exact"}],"termid":"FYPO:0001145"}


id: PBO:0027872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylated_histone_binding","termid":"PBO:0027872"}


id: PBO:0041444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 85","termid":"PBO:0041444"}


id: GO:0102701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = tricyclene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tricyclene synthase activity","secondary_identifiers":["MetaCyc:RXN-5121","RHEA:32687"],"termid":"GO:0102701"}


id: GO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C4b product of the classical complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C4b binding","termid":"GO:0001855"}


id: PBO:0081271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 35","termid":"PBO:0081271"}


id: PR:O13290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic dynein 1 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.06c","secondary_identifiers":["UniProtKB:O13290"],"synonyms":[{"name":"DYHC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DYNC1H1","type":"exact"},{"name":"dynein heavy chain, cytosolic (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13290"}


id: PBO:0054317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1709","termid":"PBO:0054317"}


id: PBO:0029295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G0_to_G1_transition","termid":"PBO:0029295"}


