# terms

id: GO:0036004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GAF protein domain.","definition_xrefs":["InterPro:IPR003018","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"GAF domain binding","termid":"GO:0036004"}


id: PBO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor Raf1","termid":"PBO:0005003"}


id: GO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone binding (obsolete GO:0006717)","synonyms":[{"name":"juvenile hormone binding","type":"exact"}],"termid":"GO:0006717"}


id: FYPO:0001180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0001180)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001180"}


id: GO:1903889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant epidermal cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:123345","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"negatively_regulates","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant epidermal cell differentiation","synonyms":[{"name":"down regulation of plant epidermal cell differentiation","type":"exact"},{"name":"down-regulation of plant epidermal cell differentiation","type":"exact"},{"name":"downregulation of plant epidermal cell differentiation","type":"exact"},{"name":"inhibition of plant epidermal cell differentiation","type":"narrow"}],"termid":"GO:1903889"}


id: PBO:0089357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside 2-deoxyribosyltransferase","termid":"PBO:0089357"}


id: PBO:0017848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght7 (predicted)","termid":"PBO:0017848"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: PBO:0089349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1","termid":"PBO:0089349"}


id: SO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post_transcriptionally modified base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base","termid":"SO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_RNA_base_feature","synonyms":[{"name":"modified RNA base feature","type":"exact"}],"termid":"SO:0000250"}


id: PBO:0079468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 1","termid":"PBO:0079468"}


id: GO:1904672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF","PMID:19409607","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"}


id: GO:0042063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the generation of glial cells. This includes the production of glial progenitors and their differentiation into mature glia.","definition_xrefs":["GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gliogenesis","synonyms":[{"name":"glial cell generation","type":"exact"}],"termid":"GO:0042063"}


id: PBO:0066765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 63","termid":"PBO:0066765"}


id: PBO:0005501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Spt3","termid":"PBO:0005501"}


id: PR:P0CT66
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.11c","synonyms":[{"name":"Spom972h-rps1801","type":"exact"}],"termid":"PR:P0CT66"}


id: GO:0016793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a triphosphoester to give a triphosphate group and a free hydroxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric ester hydrolase activity","termid":"GO:0042578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"triphosphoric monoester hydrolase activity","secondary_identifiers":["EC:3.1.5.-","Reactome:R-HSA-8866601"],"termid":"GO:0016793"}


id: GO:1900317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maltopentaose transport","termid":"GO:1900315"},{"relation_name":"is_a","term_name":"positive regulation of pentasaccharide transport","termid":"GO:1900362"},{"relation_name":"positively_regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltopentaose transport","synonyms":[{"name":"activation of maltopentaose transport","type":"narrow"},{"name":"up regulation of maltopentaose transport","type":"exact"},{"name":"up-regulation of maltopentaose transport","type":"exact"},{"name":"upregulation of maltopentaose transport","type":"exact"}],"termid":"GO:1900317"}


id: PBO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 40","termid":"PBO:0070932"}


id: PBO:0087758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen34p contains the active site for tRNA 3' splice site cleavage and has similarity to Sen2p and to Archaeal tRNA splicing endonuclease","termid":"PBO:0087758"}


id: PBO:0074680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63B","termid":"PBO:0074680"}


id: PBO:0109815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory particle assembly factor Nas2","termid":"PBO:0109815"}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: GO:0030870
data:
  {"annotated_genes":["SJAG_00640","SJAG_01677","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78097,84906,107063],"is_not":false,"summary":null,"term":"GO:0030870"}]},"cv_name":"cellular_component","definition":"Trimeric protein complex that possesses endonuclease activity; involved in meiotic recombination, DNA repair and checkpoint signaling. In Saccharomyces cerevisiae, the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins orthologous to the Saccharomyces cerevisiae proteins.","definition_xrefs":["GOC:mah","PMID:11988766","GOC:vw","PMID:17674145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Mre11 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MRN complex","type":"exact"},{"name":"MRX complex","type":"exact"},{"name":"RAD50-MRE11-NBN complex","type":"exact"},{"name":"RMX complex","type":"exact"},{"name":"Rad50 complex","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex","type":"exact"}],"termid":"GO:0030870","terms_by_termid":{"GO:0030870":null}}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: PBO:0108922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX1 pseudogene 2","termid":"PBO:0108922"}


id: PBO:0078291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (GCA) 24-1","termid":"PBO:0078291"}


id: PBO:0047931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(11)(p15.1)","termid":"PBO:0047931"}


id: GO:0038199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ethylene and transmitting the signal in the cell to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:22467798","PMID:24012247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ethylene receptor activity","synonyms":[{"name":"C2H4 receptor activity","type":"exact"},{"name":"ethylene response sensor","type":"related"}],"termid":"GO:0038199"}


id: PBO:0072581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 4","termid":"PBO:0072581"}


id: PBO:0063517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 2, pseudogene","termid":"PBO:0063517"}


id: PR:O14140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome complex subunit DSS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02235","PANTHER:PTHR16771:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor dss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.02","secondary_identifiers":["UniProtKB:O14140"],"synonyms":[{"name":"Spom972h-SHFM1","type":"exact"}],"termid":"PR:O14140"}


id: PBO:0056743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 1, tRNA methylguanosine","termid":"PBO:0056743"}


id: GO:0060724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular messenger, and in cooperation with a primary EGF receptor, initiating a change in cell activity through the EGF receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060724)","synonyms":[{"name":"coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060724"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: PBO:0046533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERRFI1 divergent transcript","termid":"PBO:0046533"}


id: PBO:0081583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF511-PRAP1 readthrough","termid":"PBO:0081583"}


id: GO:0050191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + GTP = 3-phospho-D-glyceroyl phosphate + GDP + H+.","definition_xrefs":["RHEA:23332","EC:2.7.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phosphoglycerate kinase (GTP) activity","secondary_identifiers":["KEGG_REACTION:R01517","MetaCyc:PHOSPHOGLYCERATE-KINASE-GTP-RXN"],"synonyms":[{"name":"GTP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0050191"}


id: RO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X outer_layer_of Y iff:\\n. X :continuant that bearer_of some PATO:laminar\\n. X part_of Y\\n. exists Z :surface\\n. X has_boundary Z\\n. Z boundary_of Y\\n\\nhas_boundary: http://purl.obolibrary.org/obo/RO_0002002\\nboundary_of: http://purl.obolibrary.org/obo/RO_0002000","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounding_layer_of","termid":"RO:0002007"}


id: PBO:0050157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 13","termid":"PBO:0050157"}


id: PBO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BL member 1 pseudogene","termid":"PBO:0062245"}


id: PBO:0064509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J","termid":"PBO:0064509"}


id: PBO:0078272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 8-1","termid":"PBO:0078272"}


id: FYPO:0004757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal. May result in re-replication of all or part of the genome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation","synonyms":[{"name":"DNA re-replication","type":"related"},{"name":"DNA replication defects, endoreduplication","type":"related"},{"name":"DNA rereplication","type":"related"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"FYPO:0004757"}


id: GO:0015080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silver (Ag) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"silver ion transmembrane transporter activity","synonyms":[{"name":"silver transporter activity","type":"exact"}],"termid":"GO:0015080"}


id: PBO:0081448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 316","termid":"PBO:0081448"}


id: PBO:0043862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-acetyltransferase","termid":"PBO:0043862"}


id: GO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates pseudohyphal growth.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter (obsolete GO:0100042)","termid":"GO:0100042"}


id: PBO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B2, pseudogene","termid":"PBO:0047163"}


id: FYPO:0007246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is abolished during anaphase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:20980623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to meiotic spindle pole body","termid":"FYPO:0003542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole body during anaphase II","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole body during anaphase II","type":"exact"},{"name":"abolished protein localization to meiotic SPB during anaphase II","type":"exact"},{"name":"protein localization to meiotic spindle pole body abolished during anaphase II","type":"exact"}],"termid":"FYPO:0007246"}


id: PR:O42699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.14","synonyms":[{"name":"Spom972h-rpl1902","type":"exact"}],"termid":"PR:O42699"}


id: PBO:0085153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome assembly factor; involved in chromatin assembly, disassembly; required for recovery after DSB repair; role in H3K56 acetylation required for expression homeostasis, buffering mRNA synthesis rate against gene dosage changes in S phase; anti-silencing protein, derepresses silent loci when overexpressed; role in regulating Ty1 transposition; relocalizes to cytosol under hypoxia; growth defect of asf1 null is functionally complemented by either human ASF1A or ASF1B","termid":"PBO:0085153"}


id: PBO:0003465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase gamma subunit (predicted)","termid":"PBO:0003465"}


id: GO:0004018
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75945],"is_not":false,"summary":null,"term":"GO:0004018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP.","definition_xrefs":["EC:4.3.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:16853","MetaCyc:AMPSYN-RXN","KEGG_REACTION:R01083"],"synonyms":[{"name":"6-N-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0004018","terms_by_termid":{"GO:0004018":null}}


id: PATO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coiling which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coiling","synonyms":[{"name":"high coiling","type":"exact"}],"termid":"PATO:0001795"}


id: GO:0102679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (5alpha)-campestan-3-one + O2 + NADPH = (5alpha,22S,24R)-22-hydroxyergostan-3-one + H2O + NADP.","definition_xrefs":["PMID:10377996","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(5alpha)-campestan-3-one hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-4230"],"termid":"GO:0102679"}


id: GO:0033151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["ISBN:0781735149","GOC:add","ISBN:0781700221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"V(D)J recombination","secondary_identifiers":["Wikipedia:V(D)J_recombination"],"synonyms":[{"name":"V(D)J joining","type":"exact"},{"name":"V-D-J joining","type":"exact"},{"name":"V-D-J recombination","type":"exact"},{"name":"V-J joining","type":"exact"},{"name":"V-J recombination","type":"exact"}],"termid":"GO:0033151"}


id: PR:Q09890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C584.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.16c","synonyms":[{"name":"Spom972h-SPCC584.16c","type":"exact"}],"termid":"PR:Q09890"}


id: GO:1903132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22898778","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube lumen cavitation","termid":"GO:1903132"}


id: GO:1990279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor MBF.","definition_xrefs":["PMID:24006488"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of MBF transcription factor activity (obsolete GO:1990279)","synonyms":[{"name":"negative regulation of MBF transcription factor activity","type":"exact"}],"termid":"GO:1990279"}


id: FYPO:0006932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of butylated hydroxyanisole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to butylated hydroxyanisole","synonyms":[{"name":"resistance to BHA","type":"exact"},{"name":"resistance to butylated hydroxyanisole during mitotic cell cycle","type":"related"},{"name":"resistance to butylated hydroxyanisole during vegetative growth","type":"exact"},{"name":"resistant to BHA","type":"exact"},{"name":"resistant to butylated hydroxyanisole","type":"exact"}],"termid":"FYPO:0006932"}


id: PBO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse transcriptional regulator, HCNGP-like (predicted)","termid":"PBO:0001245"}


id: CHEBI:24431
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical entity","termid":"CHEBI:24431"}


id: PBO:0091556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein, similar to cell surface molecules","termid":"PBO:0091556"}


id: PATO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter's disposition the presence of abnormally proliferating masses of cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic","synonyms":[{"name":"tumorous","type":"exact"}],"termid":"PATO:0002011"}


id: PBO:0077079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 2","termid":"PBO:0077079"}


id: GO:1903190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxal.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:23651081","PMID:22523093","GO_REF:0000068","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glyoxal catabolic process","synonyms":[{"name":"glyoxal breakdown","type":"exact"},{"name":"glyoxal catabolism","type":"exact"},{"name":"glyoxal degradation","type":"exact"}],"termid":"GO:1903190"}


id: PBO:0079971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 9","termid":"PBO:0079971"}


id: GO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein A-I receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:rl","GOC:BHF","GOC:signaling","PMID:16443932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"apolipoprotein receptor activity","termid":"GO:0030226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein A-I receptor activity","termid":"GO:0034188"}


id: GO:0050346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-L-3-hydroxyproline = 1-pyrroline-2-carboxylate + H2O + H+.","definition_xrefs":["RHEA:10320","EC:4.2.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"trans-L-3-hydroxyproline dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04374","MetaCyc:TRANS-L-3-HYDROXYPROLINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"trans-L-3-hydroxyproline hydro-lyase (Delta1-pyrroline 2-carboxylate-forming)","type":"related"},{"name":"trans-L-3-hydroxyproline hydro-lyase activity","type":"related"}],"termid":"GO:0050346"}


id: GO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trisaccharide. Trisaccharides are sugars composed of three monosaccharide units.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"trisaccharide binding","termid":"GO:0048031"}


id: PBO:0075973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 intronic transcript 1","termid":"PBO:0075973"}


id: GO:0000224
data:
  {"annotated_genes":["SJAG_03227"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100200],"is_not":false,"summary":null,"term":"GO:0000224"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-N-(N-acetyl-D-glucosaminyl)-protein + H2O = N-acetyl-beta-D-glucosaminylamine + peptide L-aspartate. This reaction is the hydrolysis of an N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the N-acetyl-D-glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and the peptide containing an aspartic residue.","definition_xrefs":["EC:3.5.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03227":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.5.1.52-RXN","Reactome:R-HSA-8850594"],"synonyms":[{"name":"glycopeptidase activity","type":"broad"},{"name":"N-glycanase activity","type":"related"},{"name":"N-linked-glycopeptide-(N-acetyl-beta-D-glucosaminyl)-L-asparagine amidohydrolase activity","type":"related"},{"name":"N-oligosaccharide glycopeptidase activity","type":"related"},{"name":"PNGase","type":"exact"},{"name":"PNGase A","type":"related"},{"name":"PNGase F","type":"related"},{"name":"glycopeptide N-glycosidase activity","type":"broad"},{"name":"jack-bean glycopeptidase","type":"narrow"},{"name":"peptide:N-glycanase","type":"related"}],"termid":"GO:0000224","terms_by_termid":{"GO:0000224":null}}


id: PBO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.1","termid":"PBO:0000393"}


id: PATO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxiness","termid":"PATO:0002381"}


id: PBO:0050056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, W (pseudogene)","termid":"PBO:0050056"}


id: PBO:0077623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15B","termid":"PBO:0077623"}


id: PBO:0082722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the polarisome; functions in actin cytoskeletal organization during polarized growth; acts as a scaffold for Mkk1p and Mpk1p cell wall integrity signaling components; potential Cdc28p substrate; coding sequence contains length polymorphisms in different strains; SPA2 has a paralog, SPH1, that arose from the whole genome duplication","termid":"PBO:0082722"}


id: PBO:0087833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiazole synthase; abundant protein involved in the formation of the thiazole moiety of thiamine during thiamine biosynthesis; acts more as a co-substrate rather than an enzyme by providing the sulphur source for thiazole formation; undergoes a single turnover only; required for mitochondrial genome stability in response to DNA damaging agents","termid":"PBO:0087833"}


id: GO:0097641
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112584],"is_not":false,"summary":null,"term":"GO:0097641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate (alpha-ketoglutarate) + O2 + xanthine = CO2 + succinate + urate.","definition_xrefs":["PMID:17429948","RHEA:43120","PMID:15948966","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate-dependent xanthine dioxygenase activity","type":"exact"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine dioxygenase activity","type":"related"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine hydroxylase activity","type":"related"}],"termid":"GO:0097641","terms_by_termid":{"GO:0097641":null}}


id: PBO:0063320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piccolo presynaptic cytomatrix protein","termid":"PBO:0063320"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: FYPO:0001576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on dipeptide nitrogen source","synonyms":[{"name":"abolished dipeptide utilization","type":"related"},{"name":"abolished vegetative cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"cell population growth on dipeptide nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001576"}


id: GO:0003839
data:
  {"annotated_genes":["SJAG_00903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75674],"is_not":false,"summary":null,"term":"GO:0003839"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (5-L-glutamyl)-L-amino acid = 5-oxoproline + L-amino acid.","definition_xrefs":["PMID:18515354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"gamma-glutamylcyclotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN","RHEA:20505","EC:4.3.2.9","Reactome:R-HSA-1247922","Reactome:R-HSA-6785928"],"synonyms":[{"name":"(5-L-glutamyl)-L-amino-acid 5-glutamyltransferase (cyclizing)","type":"exact"},{"name":"L-glutamic cyclase activity","type":"exact"},{"name":"gamma-L-glutamylcyclotransferase activity","type":"exact"},{"name":"gamma-glutamyl-amino acid cyclotransferase activity","type":"exact"}],"termid":"GO:0003839","terms_by_termid":{"GO:0003839":null}}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: PR:P87295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pep5-like zinc finger protein C16A10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.03c","synonyms":[{"name":"Spom972h-SPAC16A10.03c","type":"exact"}],"termid":"PR:P87295"}


id: PBO:0053101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 7A","termid":"PBO:0053101"}


id: FYPO:0002025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, contains a septum with abnormal morphology (i.e. size, shape, or structure), and contain more than one nucleus.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with abnormal septum","termid":"FYPO:0002889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated multinucleate vegetative cell with abnormal septum morphology","synonyms":[{"name":"elongated multinucleate inviable vegetative cell with abnormal septum morphology","type":"exact"},{"name":"inviable elongated multinucleate cell with abnormal septum morphology during vegetative growth","type":"exact"},{"name":"inviable elongated multinucleate vegetative cell with abnormal septum morphology during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate vegetative cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0002025"}


id: GO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate.","definition_xrefs":["EC:3.1.4.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-1483107","RHEA:12969","Reactome:R-HSA-1483116","MetaCyc:GLYCPDIESTER-RXN"],"synonyms":[{"name":"IgD-binding protein D","type":"related"},{"name":"gene hpd protein","type":"related"},{"name":"glycerophosphodiester glycerophosphohydrolase activity","type":"related"},{"name":"glycerophosphoryl diester phosphodiesterase activity","type":"related"}],"termid":"GO:0008889"}


id: GO:2001304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin B4. Lipoxin B4 is a C20 hydroxy fatty acid having (5S)-, (14R)- and (15S)-hydroxy groups as well as (6E)- (8Z)-, (10E)- and (12E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lipoxin B4 metabolic process","synonyms":[{"name":"LXB4 metabolic process","type":"exact"},{"name":"LXB4 metabolism","type":"exact"},{"name":"lipoxin B4 metabolism","type":"exact"}],"termid":"GO:2001304"}


id: PBO:0110324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Yt blood group)","termid":"PBO:0110324"}


id: GO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Wnt-protein, a secreted growth factor involved in signaling.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Wnt-protein binding","termid":"GO:0017147"}


id: GO:0007584
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nutrient","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nutritional response pathway","type":"narrow"},{"name":"response to nutrients","type":"exact"}],"termid":"GO:0007584","terms_by_termid":{"GO:0036245":null}}


id: GO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).","definition_xrefs":["TC:2.A.28.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"},{"relation_name":"is_a","term_name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"bile acid:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-194121","Reactome:R-HSA-194187","Reactome:R-HSA-433089"],"synonyms":[{"name":"sodium/bile acid symporter activity","type":"exact"}],"termid":"GO:0008508"}


id: GO:0070804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metula development","termid":"GO:0070804"}


id: PBO:0074115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 1","termid":"PBO:0074115"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: PBO:0077340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 79","termid":"PBO:0077340"}


id: PBO:0073150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24B antisense RNA 1","termid":"PBO:0073150"}


id: PBO:0027086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027086"}


id: GO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-aminoadipate + acetyl-CoA = N2-acetyl-alpha-aminoadipate + coenzyme A.","definition_xrefs":["PMID:10613839","PMID:12925802","PMID:29053735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alpha-aminoadipate acetyltransferase activity","secondary_identifiers":["GO:0043869","MetaCyc:RXN-5181"],"synonyms":[{"name":"L-2-aminoadipate N-acetyltransferase activity","type":"related"}],"termid":"GO:0043741"}


id: GO:1900134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"negatively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renin secretion into blood stream","synonyms":[{"name":"down regulation of renin release into blood stream","type":"exact"},{"name":"down regulation of renin secretion into blood stream","type":"exact"},{"name":"down-regulation of renin release into blood stream","type":"exact"},{"name":"down-regulation of renin secretion into blood stream","type":"exact"},{"name":"downregulation of renin release into blood stream","type":"exact"},{"name":"downregulation of renin secretion into blood stream","type":"exact"},{"name":"inhibition of renin release into blood stream","type":"narrow"},{"name":"inhibition of renin secretion into blood stream","type":"narrow"},{"name":"negative regulation of renin release into blood stream","type":"exact"}],"termid":"GO:1900134"}


id: MOD:00509
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12643539","Unimod:141","PubMed:6273432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:00509"}


id: GO:0007519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"},{"relation_name":"part_of","term_name":"skeletal muscle organ development","termid":"GO:0060538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue development","secondary_identifiers":["GO:0048637"],"synonyms":[{"name":"myogenesis","type":"related"}],"termid":"GO:0007519"}


id: GO:0097388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: PBO:0072397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 2","termid":"PBO:0072397"}


id: GO:0006106
data:
  {"annotated_genes":["SJAG_00203","SJAG_00044","SJAG_02850","SJAG_04843","SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77980,84633,85890,98902,105726],"is_not":false,"summary":null,"term":"GO:0006106"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00203":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fumarate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fumarate metabolism","type":"exact"}],"termid":"GO:0006106","terms_by_termid":{"GO:0006106":null}}


id: PBO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 4","termid":"PBO:0048612"}


id: PR:P09322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03744","PANTHER:PTHR10484:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.03c","secondary_identifiers":["UniProtKB:P09322"],"synonyms":[{"name":"Spom972h-HIST4H4","type":"exact"}],"termid":"PR:P09322"}


id: GO:0099078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in positioning of the lysosome within the cytoplasm and which is composed of BLOC1S1, BLOC1S2, BORCS5, BORCS6, BORCS7, BORCS8, KXD1 and SNAPIN. The BORC complex recruits ARL8 at the cytosolic face of lysosomes and couples them to microtubule plus-end-directed kinesin motors.","definition_xrefs":["GOC:li","GOC:dos","PMID:25898167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BORC complex","termid":"GO:0099078"}


id: PBO:0066169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 2","termid":"PBO:0066169"}


id: MOD:00141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["PubMed:3208761","PubMed:8876649","RESID:AA0132","Unimod:388#C","ChEBI:15618","PubMed:3838747","PubMed:14588022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phycoerythrobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"Phycoerythrobilin","type":"related"},{"name":"S-phycoerythrobilin-L-cysteine","type":"exact"},{"name":"phycoerythrobilin","type":"related"},{"name":"phycoerythrobilin cysteine adduct","type":"exact"}],"termid":"MOD:00141"}


id: GO:1904473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-dopa stimulus.","definition_xrefs":["PMID:25044243","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-dopa","termid":"GO:1904473"}


id: SO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"frameshift","termid":"SO:0000865"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_frameshift","synonyms":[{"name":"frameshifted mRNA","type":"exact"},{"name":"mRNA with frameshift","type":"exact"}],"termid":"SO:0000108"}


id: PR:O42901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC119.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.09c","synonyms":[{"name":"Spom972h-SPBC119.09c","type":"exact"}],"termid":"PR:O42901"}


id: FYPO:0007059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to late endosomes is decreased.","definition_xrefs":["PMID:31341193","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endosome","termid":"FYPO:0007587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to late endosome","synonyms":[{"name":"decreased protein localisation to late endosome","type":"exact"},{"name":"decreased protein localization to PVE","type":"exact"},{"name":"decreased protein localization to late endosome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to late endosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to prevacuolar compartment","type":"exact"},{"name":"decreased protein localization to prevacuolar endosome","type":"exact"},{"name":"reduced protein localization to late endosome","type":"exact"}],"termid":"FYPO:0007059"}


id: PBO:0028419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nitrogen_starvation","termid":"PBO:0028419"}


id: PBO:0068046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 351","termid":"PBO:0068046"}


id: GO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurocranium are generated and organized during the embryonic phase. The neurocranium is the portion of the vertebrate skull surrounding the brain.","definition_xrefs":["GOC:jid","PMID:16049113","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic neurocranium morphogenesis","synonyms":[{"name":"embryonic braincase morphogenesis","type":"exact"},{"name":"embryonic chondrocranium morphogenesis","type":"exact"}],"termid":"GO:0048702"}


id: PBO:0083389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HRT1, a verified gene that encodes an SCF ubiquitin ligase subunit","termid":"PBO:0083389"}


id: PBO:0003094
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotetrameric","termid":"PBO:0003094"}


id: PBO:0091143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Y, phosphatidylinositol N-acetylglucosaminyltransferase subunit Eri1","termid":"PBO:0091143"}


id: PBO:0090896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spg1-binding protein Etd1","termid":"PBO:0090896"}


id: PBO:0049287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 6, pseudogene","termid":"PBO:0049287"}


id: FYPO:0007071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase a.","definition_xrefs":["PMID:31427431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase A","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase A","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase A","type":"exact"},{"name":"increased rate of spindle elongation during anaphase A of mitosis","type":"exact"}],"termid":"FYPO:0007071"}


id: GO:0102910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 coniferol + O2 = (+)-pinoresinol + 2 H2O.","definition_xrefs":["EC:1.10.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dirigent protein activity","secondary_identifiers":["MetaCyc:RXN-8677"],"termid":"GO:0102910"}


id: GO:0062027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032436"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"positively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062027"}


id: GO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transmembrane transporter activity (obsolete GO:0042911)","synonyms":[{"name":"acridine transporter activity","type":"related"}],"termid":"GO:0042911"}


id: PBO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1 (predicted)","termid":"PBO:0002209"}


id: PBO:0073490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 2","termid":"PBO:0073490"}


id: GO:0035531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:bf","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035534","GO:0035535"],"synonyms":[{"name":"chemokine (C-C motif) ligand 6 secretion","type":"narrow"},{"name":"regulation of CCL6 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035531"}


id: PBO:0045555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 7","termid":"PBO:0045555"}


id: FYPO:0002372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and are shaped in the form of spheroids.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable spheroid vegetative cell population (obsolete FYPO:0002372)","synonyms":[{"name":"population of spheroid viable cells","type":"exact"},{"name":"viable rounded vegetative cell population","type":"exact"}],"termid":"FYPO:0002372"}


id: PBO:0042614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 14","termid":"PBO:0042614"}


id: GO:1901700
data:
  {"annotated_genes":["SJAG_01699","SJAG_00668","SJAG_01754","SJAG_02515","SJAG_05181","SJAG_02960","SJAG_04823","SJAG_04399","SJAG_04632","SJAG_00472","SJAG_02444","SJAG_03303","SJAG_03032","SJAG_01254","SJAG_02010","SJAG_01457","SJAG_04788","SJAG_00574","SJAG_05256","SJAG_04312","SJAG_01216","SJAG_03081","SJAG_01858","SJAG_01734","SJAG_00141","SJAG_04026","SJAG_06611","SJAG_03653","SJAG_01162","SJAG_04953","SJAG_04403","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104908,97348,111819,89849,101925,102276,110789,104410,101340],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108055],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[95523,104233,112592,100486,113479,90797],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[100489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[76539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[100666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[91137,76932],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[68715,84734,85144,58087,95680,105466,94825,88765,105511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[91314,89181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_01858":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03032":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901700","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0097466":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0076817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense RNA 1","termid":"PBO:0076817"}


id: PBO:0074570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 26","termid":"PBO:0074570"}


id: SO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 4 modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059","EBI:nj","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_4_acetylation_site","synonyms":[{"name":"H4ac","type":"exact"},{"name":"histone 4 acetylation site","type":"exact"}],"termid":"SO:0001972"}


id: PBO:0014576
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CLNS1A","termid":"PBO:0014576"}


id: PATO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brown green","synonyms":[{"name":"olive green","type":"exact"}],"termid":"PATO:0001942"}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:23624077","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anti-Mullerian hormone signaling pathway","termid":"GO:1990262"}


id: GO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lysosome before it has fused with a vesicle or vacuole.","definition_xrefs":["ISBN:0815316194","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"primary lysosome","secondary_identifiers":["NIF_Subcellular:sao1140587416"],"termid":"GO:0005766"}


id: GO:1900640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of austinol biosynthetic process","synonyms":[{"name":"regulation of austinol anabolism","type":"exact"},{"name":"regulation of austinol biosynthesis","type":"exact"},{"name":"regulation of austinol formation","type":"exact"},{"name":"regulation of austinol synthesis","type":"exact"}],"termid":"GO:1900640"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: GO:0016735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + nitrogen + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete vanadium-iron nitrogenase activity (obsolete GO:0016735)","synonyms":[{"name":"vanadium-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016735"}


id: PR:A6X974
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.08c gene.","definition_xrefs":["UniProtKB:A6X974","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.08c","synonyms":[{"name":"Spom972h-SPAC8E11.08c","type":"exact"}],"termid":"PR:A6X974"}


id: PBO:0091176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein","termid":"PBO:0091176"}


id: PBO:0029336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_phosphorylation","termid":"PBO:0029336"}


id: PBO:0053488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 463","termid":"PBO:0053488"}


id: GO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["PMID:29778524","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-4 production","secondary_identifiers":["GO:0150133","GO:0045402"],"synonyms":[{"name":"regulation of IL-4 production","type":"exact"},{"name":"regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032673"}


id: GO:0060910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060910"}


id: PR:P78955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A checkpoint protein HUS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12900:SF0","PRO:DNx","OMA:SCHPO01999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein hus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.04c","secondary_identifiers":["UniProtKB:P78955"],"synonyms":[{"name":"Spom972h-HUS1","type":"exact"}],"termid":"PR:P78955"}


id: GO:1990139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nuclear periphery.","definition_xrefs":["PMID:23703609","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nuclear periphery","termid":"GO:1990139"}


id: GO:0062105
data:
  {"annotated_genes":["SJAG_01375","SJAG_03773","SJAG_00722","SJAG_02817","SJAG_01269","SJAG_03332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[77516,74740,75143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[104517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090486"},{"annotations":[93427,86635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + RNA = S-adenosyl-L-homocysteine + RNA containing 2'-O-methylribonucleotide.","definition_xrefs":["RHEA:58956","PMID:30626973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_01269":null,"SJAG_01375":null,"SJAG_02817":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"RNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0062105","terms_by_termid":{"GO:0008650":null,"GO:0070039":null,"GO:0090486":null,"GO:0106050":null}}


id: PBO:0054124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1490","termid":"PBO:0054124"}


id: PBO:0081714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 639","termid":"PBO:0081714"}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: PBO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc transferase associated protein Alg14 (predicted)","termid":"PBO:0001012"}


id: PBO:0059255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L21","termid":"PBO:0059255"}


id: PBO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTPase KAP family P-loop domain containing 1","termid":"PBO:0061076"}


id: PR:P78970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ceramide synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase lag1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.09c","secondary_identifiers":["UniProtKB:P78970"],"synonyms":[{"name":"Spom972h-CERS1","type":"exact"},{"name":"longevity assurance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"longevity assurance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78970"}


id: PBO:0109352
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(16)","termid":"PBO:0109352"}


id: PBO:0049679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta","termid":"PBO:0049679"}


id: PBO:0075031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-42","termid":"PBO:0075031"}


id: PBO:0073140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B3, pseudogene","termid":"PBO:0073140"}


id: PBO:0041214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 2","termid":"PBO:0041214"}


id: GO:0048252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lauric acid, a fatty acid with the formula CH3(CH2)10COOH. Derived from vegetable sources.","definition_xrefs":["GOC:jid","PMID:15555597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lauric acid metabolic process","synonyms":[{"name":"lauric acid metabolism","type":"exact"},{"name":"n-dodecanoic acid metabolic process","type":"exact"},{"name":"n-dodecanoic acid metabolism","type":"exact"}],"termid":"GO:0048252"}


id: FYPO:0007906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal during amino acid starvation.","definition_xrefs":["PMID:34805795","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth rate during amino acid starvation","synonyms":[{"name":"increased cell proliferation during amino acid starvation","type":"exact"}],"termid":"FYPO:0007906"}


id: PBO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 1","termid":"PBO:0060730"}


id: PBO:0040776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 2","termid":"PBO:0040776"}


id: FYPO:0001111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione disulfide (GSSG) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione disulfide level","synonyms":[{"name":"increased cellular GSSG level","type":"exact"},{"name":"increased cellular glutathione disulfide level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutathione disulfide level during vegetative growth","type":"exact"},{"name":"increased cellular glutathione disulphide level","type":"exact"},{"name":"increased cellular oxidised glutathione level","type":"exact"},{"name":"increased glutathione disulfide accumulation","type":"related"}],"termid":"FYPO:0001111"}


id: PBO:0044280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 3","termid":"PBO:0044280"}


id: PBO:0018087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Prp24","termid":"PBO:0018087"}


id: FYPO:0008012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell dies at a level of mechanical stress that wild-type cells can normally withstand.","definition_xrefs":["PMID:34666001","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"cell sensitive to mechanical stress","termid":"FYPO:0008012"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110843],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: GO:1990481
data:
  {"annotated_genes":["SJAG_00088","SJAG_02978","SJAG_04754","SJAG_04065","SJAG_00319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70779,72549,75043,77310,78805],"is_not":false,"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an mRNA molecule.","definition_xrefs":["PMID:25192136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mRNA pseudouridylation","type":"exact"}],"termid":"GO:1990481","terms_by_termid":{"GO:1990481":null}}


id: PATO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000746 consumption value (obsolete PATO:0000746)","termid":"PATO:0000746"}


id: PBO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1 (predicted)","termid":"PBO:0002220"}


id: GO:1990645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of phosphorylases by removal of phosphate groups.","definition_xrefs":["PMID:8602837"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylase dephosphorylation (obsolete GO:1990645)","synonyms":[{"name":"phosphorylase dephosphorylation","type":"exact"}],"termid":"GO:1990645"}


id: PBO:0085353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; induced by glucose starvation; protein abundance increases in response to DNA replication stress","termid":"PBO:0085353"}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: PBO:0062821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive serine rich 1","termid":"PBO:0062821"}


id: SOFP:pr_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"An amino acid modification in some variant feature relative to the reference sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pr_change","termid":"SOFP:pr_change"}


id: GO:0034855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: androst-4-ene-3,17-dione + O2 + 2 H+ + 2 e- = 9alpha-hydroxy-4-androstene-3,17-dione + H2O.","definition_xrefs":["UM-BBD_reactionID:r1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-AD 9alpha-hydroxylase activity","secondary_identifiers":["EC:1.14.15.-"],"termid":"GO:0034855"}


id: GO:0050586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylquinolin-4(1H)-one + H+ + O2 = N-acetylanthranilate + CO.","definition_xrefs":["RHEA:21572","EC:1.13.11.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylquinolin-4-one 2,4-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05720","MetaCyc:1.13.11.48-RXN"],"synonyms":[{"name":"(1H)-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase activity","type":"related"},{"name":"1H-3-hydroxy-4-oxo quinaldine 2,4-dioxygenase activity","type":"exact"},{"name":"1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase activity","type":"exact"},{"name":"3-hydroxy-2-methyl-1H-quinolin-4-one 2,4-dioxygenase (CO-forming)","type":"related"},{"name":"3-hydroxy-2-methyl-quinolin-4-one 2,4-dioxygenase activity","type":"exact"}],"termid":"GO:0050586"}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: PBO:0086668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational 'guilt by association' analysis","termid":"PBO:0086668"}


id: PATO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's absence or closure of a normal body orifice or tubular passage.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closed","termid":"PATO:0000608"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atretic","synonyms":[{"name":"atresia","type":"exact"}],"termid":"PATO:0001819"}


id: PBO:0089376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec74","termid":"PBO:0089376"}


id: PBO:0065163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion locus lncRNA, testis expressed","termid":"PBO:0065163"}


id: GO:0010356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H(+) + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.","definition_xrefs":["EC:2.5.1.116","PMID:16989822","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"homogentisate geranylgeranyltransferase activity","secondary_identifiers":["RHEA:38003","MetaCyc:RXN-14929"],"synonyms":[{"name":"homogentisate geranylgeranyl transferase activity","type":"exact"}],"termid":"GO:0010356"}


id: PBO:0050585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 2","termid":"PBO:0050585"}


id: PBO:0068494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 78, pseudogene","termid":"PBO:0068494"}


id: MOD:00781
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to N2-acetyl-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-acetyl-L-histidine","synonyms":[{"name":"AcHis","type":"exact"}],"termid":"MOD:00781"}


id: GO:0046956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cell or organism towards a source of light.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototaxis","termid":"GO:0042331"},{"relation_name":"is_a","term_name":"positive energy taxis","termid":"GO:0052128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive phototaxis","secondary_identifiers":["GO:0046954"],"synonyms":[{"name":"positive phototactic behavior","type":"exact"},{"name":"positive phototactic behaviour","type":"exact"},{"name":"positive taxis in response to light","type":"exact"}],"termid":"GO:0046956"}


id: GO:0090520
data:
  {"annotated_genes":["SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100624],"is_not":false,"summary":null,"term":"GO:0090520"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by a sphingolipid.","definition_xrefs":["PMID:9525917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sphingolipid mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide 1-phosphate signaling pathway","type":"narrow"},{"name":"ceramide signaling pathway","type":"narrow"},{"name":"sphingolipid mediated signal transduction","type":"exact"},{"name":"sphingolipid signaling pathway","type":"related"},{"name":"sphingolipid-mediated signaling pathway","type":"exact"},{"name":"sphingosine signaling pathway","type":"narrow"}],"termid":"GO:0090520","terms_by_termid":{"GO:0090520":null}}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: PBO:0055886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8C divergent transcript","termid":"PBO:0055886"}


id: GO:0102815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + caffeoyl-CoA = delphinidin 3-O-glucosyl-5-O-caffeoylglucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.153","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"caffeoyl-CoA:delphinidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8233"],"termid":"GO:0102815"}


id: PBO:0063482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDK1 and ITGA6 antisense RNA 1","termid":"PBO:0063482"}


id: GO:0009056
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id: GO:0060385
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurite development process that generates a long process of a neuron, as it invades a target tissue.","definition_xrefs":["GOC:dph","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonogenesis","termid":"GO:0007409"},{"relation_name":"part_of","term_name":"innervation","termid":"GO:0060384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis involved in innervation","termid":"GO:0060385"}


id: GO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Endonucleolytic cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA in the mitochondrion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:0072684)","synonyms":[{"name":"mitochondrial endonucleolytic tRNA 3'-end cleavage","type":"exact"},{"name":"mitochondrial endonucleolytic tRNA 3'-trailer cleavage","type":"related"},{"name":"mitochondrial tRNA 3'-end cleavage, endonucleolytic","type":"exact"}],"termid":"GO:0072684"}


id: PBO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin dependent monooxygenase (predicted)","termid":"PBO:0003815"}


id: GO:2000446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"regulation of MIF signaling pathway","type":"exact"},{"name":"regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000446"}


id: PBO:0073000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 2","termid":"PBO:0073000"}


id: PBO:0005538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein coupled receptor Git3","termid":"PBO:0005538"}


id: PBO:0059688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 54","termid":"PBO:0059688"}


id: PBO:0110260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb11","termid":"PBO:0110260"}


id: GO:0033206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after meiosis, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cytokinesis","synonyms":[{"name":"cytokinesis after meiosis","type":"exact"}],"termid":"GO:0033206"}


id: GO:0048647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental and/or genetic cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination","termid":"GO:0048647"}


id: PBO:0075739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 54","termid":"PBO:0075739"}


id: PBO:0046970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member G","termid":"PBO:0046970"}


id: SO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA regions delimited by different nonspurious TSS-TTS pairs.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_unit","synonyms":[{"name":"transcription unit","type":"exact"}],"termid":"SO:0002301"}


id: GO:0033806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + fluoroacetaldehyde = acetaldehyde + 4-fluoro-L-threonine.","definition_xrefs":["RHEA:11748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016744","GO:0003824"],"is_obsolete":false,"name":"fluorothreonine transaldolase activity","secondary_identifiers":["EC:2.2.1.8"],"synonyms":[{"name":"fluoroacetaldehyde:L-threonine aldehydetransferase activity","type":"related"}],"termid":"GO:0033806"}


id: PBO:0053130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCT antisense RNA 1","termid":"PBO:0053130"}


id: PR:Q6LA55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q6LA55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0648 protein C3H5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.09c","synonyms":[{"name":"Spom972h-SPAC3H5.09c","type":"exact"}],"termid":"PR:Q6LA55"}


id: GO:0047133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: electron-transferring flavoprotein + H2O + dimethylamine = reduced electron-transferring flavoprotein + formaldehyde + methylamine.","definition_xrefs":["EC:1.5.8.1","MetaCyc:1.5.8.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dimethylamine dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1380","RHEA:10204"],"synonyms":[{"name":"DMADh activity","type":"related"},{"name":"dimethylamine:electron-transferring flavoprotein oxidoreductase activity","type":"related"}],"termid":"GO:0047133"}


id: GO:0050684
data:
  {"annotated_genes":["SJAG_01511","SJAG_02058","SJAG_01799","SJAG_00504","SJAG_01040","SJAG_02018","SJAG_05231","SJAG_04782","SJAG_01919","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75191],"is_not":false,"summary":null,"term":"GO:0050684"},{"annotations":[113604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[87810,106278,73491,74593,74666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[90982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[94131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"},{"annotations":[89375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00504":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01511":null,"SJAG_01799":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_04782":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0050684","terms_by_termid":{"GO:0000381":null,"GO:0048024":null,"GO:0048026":null,"GO:0050684":null,"GO:1905744":null,"GO:1905746":null}}


id: PR:O74909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.11c","synonyms":[{"name":"Spom972h-meu23","type":"exact"}],"termid":"PR:O74909"}


id: MOD:01905
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:8557573","PubMed:7592021","RESID:AA0473"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01905"}


id: GO:2000670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of dendritic cell apoptotic process","termid":"GO:2000668"},{"relation_name":"positively_regulates","term_name":"dendritic cell apoptotic process","termid":"GO:0097048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell apoptotic process","synonyms":[{"name":"positive regulation of dendritic cell apoptosis","type":"narrow"}],"termid":"GO:2000670"}


id: GO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the amphid sensory organ.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell differentiation involved in amphid sensory organ development","termid":"GO:0003398"}


id: PBO:0046997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 89 member B","termid":"PBO:0046997"}


id: GO:0071238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to brefeldin A","termid":"GO:0031001"},{"relation_name":"is_a","term_name":"cellular response to antibiotic","termid":"GO:0071236"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brefeldin A","termid":"GO:0071238"}


id: PBO:0000874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn501","termid":"PBO:0000874"}


id: FYPO:0003333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is inviable, and grows in the form of a lemon prior to cell death. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable lemon-shaped cell","synonyms":[{"name":"inviable lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"inviable lemon-shaped cell during vegetative growth","type":"exact"},{"name":"inviable lemon-shaped vegetative cell","type":"exact"},{"name":"lethal; lemon-shaped cell","type":"exact"}],"termid":"FYPO:0003333"}


id: PBO:0076307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 3","termid":"PBO:0076307"}


id: PBO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Baller-Gerold syndrome","termid":"PBO:0011108"}


id: PATO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex angle that is formed by one side of a polygon and a line extended from an adjacent side.","direct_ancestors":[{"relation_name":"is_a","term_name":"convex angle to","termid":"PATO:0001053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external angle","termid":"PATO:0002025"}


id: FYPO:0001956
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114582],"is_not":false,"summary":null,"term":"FYPO:0001956"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is formed in the shape of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"spherical cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"orb","type":"exact"}],"termid":"FYPO:0001956","terms_by_termid":{"FYPO:0001956":null}}


id: PBO:0047293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2","termid":"PBO:0047293"}


id: PBO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex RNA helicase Ski2 (predicted)","termid":"PBO:0005410"}


id: PBO:0005356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter Gms1","termid":"PBO:0005356"}


id: MOD:00382
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionyl-L-tyrosine dipeptide to form 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one.","definition_xrefs":["PubMed:11259412","PubMed:15491166","RESID:AA0377","PubMed:10852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","synonyms":[{"name":"3-(2-methylsulfanyl)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-amino-3,6-didehydropyrazin-2-ol","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"GFP-like chromoprotein asFP595 chromophore","type":"exact"},{"name":"L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"MOD:00382"}


id: GO:0045985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"activation of pyrimidine base metabolic process","type":"narrow"},{"name":"positive regulation of pyrimidine base metabolic process","type":"exact"},{"name":"positive regulation of pyrimidine base metabolism","type":"exact"},{"name":"stimulation of pyrimidine base metabolic process","type":"narrow"},{"name":"up regulation of pyrimidine base metabolic process","type":"exact"},{"name":"up-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"upregulation of pyrimidine base metabolic process","type":"exact"}],"termid":"GO:0045985"}


id: PBO:0073045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 3","termid":"PBO:0073045"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: FYPO:0004158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains more than four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell with more than four nuclei","termid":"FYPO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated vegetative cell with fragmented septum and more than four nuclei","synonyms":[{"name":"elongated cell with fragmented septum and more than four nuclei during mitotic cell cycle","type":"related"},{"name":"elongated cell with fragmented septum and more than four nuclei during vegetative growth","type":"exact"},{"name":"long vegetative cell with fragmented septum and more than four nuclei","type":"exact"}],"termid":"FYPO:0004158"}


id: GO:0019793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of ISG15 (interferon-stimulated gene-15) from one side of the membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ISG15 carrier activity (obsolete GO:0019793)","synonyms":[{"name":"ISG15 carrier activity","type":"exact"},{"name":"interferon-stimulated gene-15 carrier activity","type":"narrow"}],"termid":"GO:0019793"}


id: PBO:0058145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4441","termid":"PBO:0058145"}


id: PATO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000229 olfactory (obsolete PATO:0000229)","termid":"PATO:0000229"}


id: FYPO:0001757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein phosphatase activity","synonyms":[{"name":"decreased phosphoprotein phosphatase activity","type":"exact"},{"name":"reduced protein phosphatase activity","type":"exact"}],"termid":"FYPO:0001757"}


id: PBO:0062827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor family member 2","termid":"PBO:0062827"}


id: PR:O94519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf30 gene.","definition_xrefs":["UniProtKB:O94519","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor spf30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.02c","synonyms":[{"name":"Spom972h-spf30","type":"exact"},{"name":"survival of motor neuron-related-splicing factor 30 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94519"}


id: PBO:0003637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR95","termid":"PBO:0003637"}


id: PBO:0057953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3677","termid":"PBO:0057953"}


id: PBO:0060255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN opposite strand","termid":"PBO:0060255"}


id: PBO:0065127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, DNA-activated, catalytic subunit","termid":"PBO:0065127"}


id: PBO:0083123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol-P-Man dependent alpha(1-3) mannosyltransferase; involved in synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins; G353A missense mutation in human ortholog ALG3 implicated in carbohydrate deficient glycoprotein syndrome type IV, which is characterized by microcephaly, severe epilepsy, minimal psychomotor development, partial deficiency of sialic acids in serum glycoproteins; wild-type human ALG3 can complement yeast alg3 mutant","termid":"PBO:0083123"}


id: PBO:0063016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 4","termid":"PBO:0063016"}


id: PR:O94336
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FCP1 homology domain-containing protein C1271.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.03c","synonyms":[{"name":"Spom972h-SPBC1271.03c","type":"exact"}],"termid":"PR:O94336"}


id: GO:0019779
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73079],"is_not":false,"summary":null,"term":"GO:0019779"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG8, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"Atg8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG7","type":"exact"},{"name":"APG8 activating enzyme activity","type":"related"}],"termid":"GO:0019779","terms_by_termid":{"GO:0019779":null}}


id: PBO:0043194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKAP2L pseudogene 1","termid":"PBO:0043194"}


id: PBO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,4-alpha-glucosidase (predicted)","termid":"PBO:0002242"}


id: FYPO:0004430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal, e.g. before the mitotic spindle has completely disassembled. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PMID:19029336","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction","synonyms":[{"name":"advanced actomyosin contractile ring contraction","type":"exact"},{"name":"decreased dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"premature actomyosin contractile ring constriction","type":"exact"},{"name":"premature actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"premature mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004430"}


id: PBO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase Idp1 (predicted)","termid":"PBO:0001945"}


id: PR:O74540
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd3 gene.","definition_xrefs":["UniProtKB:O74540","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.04c","synonyms":[{"name":"FALDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd3","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74540"}


id: GO:0019122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-D-alanine, by either racemization or from peptidyl-L-serine.","definition_xrefs":["RESID:AA0191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-D-alanine racemization","synonyms":[{"name":"alanine racemization","type":"broad"}],"termid":"GO:0019122"}


id: GO:0106387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanosine 5'-monophosphate (GMP) through an inosine 5'-monophosphate (IMP) intermediate.","definition_xrefs":["PMID:25605736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' GMP biosynthetic process","synonyms":[{"name":"'de novo' guanosine 5'-monophosphate biosynthetic process","type":"exact"}],"termid":"GO:0106387"}


id: GO:0090553
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome apex.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"unicellular trichome apex","termid":"GO:0090552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome tip","termid":"GO:0090553"}


id: GO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a dendritic cell population by cell division. A dendritic cell is a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["PMID:18469816","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell proliferation","termid":"GO:0044565"}


id: PBO:0005257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1 family protein (predicted)","termid":"PBO:0005257"}


id: GO:0015813
data:
  {"annotated_genes":["SJAG_00522","SJAG_03256","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92145],"is_not":false,"summary":null,"term":"GO:0015813"},{"annotations":[93792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate across a membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-glutamate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089711"],"synonyms":[{"name":"L-glutamate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015813","terms_by_termid":{"GO:0015813":null,"GO:0090515":null,"GO:0110141":null}}


id: PBO:0077856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM1 antisense RNA","termid":"PBO:0077856"}


id: RO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure  (e.g.- a brain region) in which its dendrite receives synaptic input.\\n\\n\t","direct_ancestors":[{"relation_name":"is_a","term_name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendrite_synapsed_in","termid":"RO:0002121"}


id: GO:2000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan metabolic process","synonyms":[{"name":"regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000948"}


id: PBO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 1","termid":"PBO:0043911"}


id: PBO:0057233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 412","termid":"PBO:0057233"}


id: PR:O42993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkh1 gene.","definition_xrefs":["UniProtKB:O42993","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP12 peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.17c","synonyms":[{"name":"FK506-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FKBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC24E9.17c","type":"related"},{"name":"Spom972h-fkh1","type":"exact"}],"termid":"PR:O42993"}


id: PATO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000061 relative pattern (obsolete PATO:0000061)","termid":"PATO:0000061"}


id: GO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cyanophore cell. Cyanophores are pigment cells derived from the neural crest. They contain a blue pigment of unknown chemical composition. The pigment is stored in fibrous organelles termed cyanosomes.","definition_xrefs":["GOC:jid","GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophore differentiation","synonyms":[{"name":"cyanophore cell differentiation","type":"exact"}],"termid":"GO:0048774"}


id: FYPO:0007968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle after normal chromosome separation in which pushing forces exerted by microtubules protruding from the spindle pole bodies displace one of the daughter nuclei to the site of cytokinesis. The septum then physically divides that nucleus into two parts, giving rise to inviable daughter cell.","definition_xrefs":["PMID:26031557","PomBase:mlr","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut following normal mitotic chromosome condensation","termid":"FYPO:0001055"},{"relation_name":"output_of","term_name":"long mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0003787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000120"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0001320","FYPO:0000120","FYPO:0002399","FYPO:0000032","FYPO:0000004","FYPO:0000641","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"cut with mitotic spindle microtubules protruding beyond spindle pole body","termid":"FYPO:0007968"}


id: GO:2000655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"},{"relation_name":"negatively_regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to testosterone stimulus","termid":"GO:2000655"}


id: PBO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 15 Y-linked","termid":"PBO:0061825"}


id: PBO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase, poly(A)-specific ribonuclease complex subunit Pan2 (predicted)","termid":"PBO:0000563"}


id: PBO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.50","termid":"PBO:0004245"}


id: PBO:0038468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 7","termid":"PBO:0038468"}


id: PBO:0087267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; phosphorylates Pan1p, Sla1p and Ent1p to negatively regulate endocytosis in response to membrane stress; regulates actin cytoskeleton organization and clathrin-dependent endocytosis; phosphorylated and inhibited by upstream kinase, Fpk1p; member, along with Ark1p and Prk1p, of the Ark kinase family","termid":"PBO:0087267"}


id: PBO:0064964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 17","termid":"PBO:0064964"}


id: GO:1904193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24498161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte apoptotic process","synonyms":[{"name":"down regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"down-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"downregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"downregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"inhibition of cholangiocyte apoptosis","type":"narrow"},{"name":"inhibition of cholangiocyte apoptotic process","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"negative regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904193"}


id: PBO:0059155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallophosphoesterase 1","termid":"PBO:0059155"}


id: GO:0052784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reuteran, a soluble glucan polymer with mainly alpha-(1->4) glycosidic linkages and significant amounts of alpha-(1->6) and alpha-(1->4,6) glucosidic linkages.","definition_xrefs":["PMID:16000808","GOC:mengo_curators","PMID:15256553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"reuteran metabolic process","termid":"GO:0052783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"reuteran biosynthetic process","synonyms":[{"name":"reuteransucrase-mediated reuteran biosynthesis","type":"narrow"}],"termid":"GO:0052784"}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: PBO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ste11","termid":"PBO:0000896"}


id: GO:0102769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + a dihydroceramide = UDP + H+ + a D-glucosyl-N-acylsphinganine.","definition_xrefs":["EC:2.4.1.80","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"dihydroceramide glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7793"],"termid":"GO:0102769"}


id: PBO:0074512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A4","termid":"PBO:0074512"}


id: MOD:00924
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and an L-threonine residue by an isopeptide bond to form N6-(L-threonyl)-L-lysine.","definition_xrefs":["PubMed:18063774","RESID:AA0440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-threonyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S,3R)-2-amino-3-hydroxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-(L-threonyl)-L-lysine","type":"exact"},{"name":"N6-threonyl-lysine","type":"exact"}],"termid":"MOD:00924"}


id: PBO:0083942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma glutamylcysteine synthetase; catalyzes the first step in glutathione (GSH) biosynthesis; expression induced by oxidants, cadmium, and mercury; protein abundance increases in response to DNA replication stress","termid":"PBO:0083942"}


id: PBO:0055299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2726","termid":"PBO:0055299"}


id: PBO:0013838
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhosphoPantothenate-Cysteine","termid":"PBO:0013838"}


id: RO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","termid":"RO:0002328"}


id: GO:0010066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the ground tissues.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground meristem histogenesis","termid":"GO:0010066"}


id: GO:0003365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}


id: GO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, deoxyguanosine triphosphate (2'-deoxyguanosine 5'-triphosphate) from other compounds, including gGDP, deoxyguanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"},{"relation_name":"is_a","term_name":"dGTP biosynthetic process","termid":"GO:0046071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dGTP biosynthetic process from dGDP","synonyms":[{"name":"dGTP anabolism from dGDP","type":"exact"},{"name":"dGTP formation from dGDP","type":"exact"},{"name":"dGTP synthesis from dGDP","type":"exact"}],"termid":"GO:0006187"}


id: PBO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crooked neck pre-mRNA splicing factor 1","termid":"PBO:0043918"}


id: GO:1903589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["PMID:23388056","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell proliferation","termid":"GO:0001938"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"positively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"activation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"activation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"positive regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"up-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"up-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"upregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"upregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"}],"termid":"GO:1903589"}


id: PR:P14965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ura4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P14965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.05c","synonyms":[{"name":"OMP decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OMPDCase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OMPdecase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ura4","type":"exact"},{"name":"UMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine 5'-monophosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P14965"}


id: PBO:0076250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 1","termid":"PBO:0076250"}


id: PBO:0072893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomedin B and thrombospondin type 1 domain containing","termid":"PBO:0072893"}


id: GO:2001197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any basement membrane assembly that is involved in embryonic body morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"basement membrane assembly","termid":"GO:0070831"},{"relation_name":"part_of","term_name":"embryonic body morphogenesis","termid":"GO:0010172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}


id: PBO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane trafficking protein, ER to Golgi Psg2","termid":"PBO:0090691"}


id: PBO:0018202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane zinc transmembrane transporter (predicted)","termid":"PBO:0018202"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: FYPO:0005521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome organization is abnormal. Nucleosome organization results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.","definition_xrefs":["GO:0034728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome organization","synonyms":[{"name":"abnormal nucleosome organisation","type":"exact"},{"name":"abnormal nucleosome organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005521"}


id: GO:0071087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha11-beta1 integrin complex bound to a type I collagen.","definition_xrefs":["PMID:10464311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha11-beta1 integrin-collagen type I complex","synonyms":[{"name":"ITGA11-ITGB1-COL1A1 complex","type":"narrow"}],"termid":"GO:0071087"}


id: PBO:0059034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23B","termid":"PBO:0059034"}


id: PBO:0082723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RAM signaling network; is involved in regulation of Ace2p activity and cellular morphogenesis, interacts with protein kinase Cbk1p and also with Kic1p","termid":"PBO:0082723"}


id: GO:0016262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein.","definition_xrefs":["EC:2.4.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:16533","GO:0016253","MetaCyc:2.4.1.94-RXN"],"synonyms":[{"name":"N-GlcNAc transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:protein beta-N-acetyl-D-glucosaminyl-transferase activity","type":"exact"},{"name":"UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"protein N-GlcNAc transferase activity","type":"exact"},{"name":"uridine diphospho-N-acetylglucosamine:polypeptide beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-protein acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0016262"}


id: GO:0102187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) = 4alpha,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102187)","termid":"GO:0102187"}


id: PBO:0029442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_abnormal_cell_morphology","termid":"PBO:0029442"}


id: FYPO:0003359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myriocin. Cells stop growing (and may die) at a concentration of myriocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to myriocin during vegetative growth","synonyms":[{"name":"hypersensitive to myriocin during vegetative growth","type":"exact"},{"name":"sensitive to myriocin during mitotic cell cycle","type":"related"},{"name":"sensitivity to chemicals interfering with lipids during vegetative growth","type":"broad"}],"termid":"FYPO:0003359"}


id: PR:Q10140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.04","synonyms":[{"name":"Spom972h-SPAC3H8.04","type":"exact"}],"termid":"PR:Q10140"}


id: PBO:0031470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_selenate","termid":"PBO:0031470"}


id: PBO:0091624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein","termid":"PBO:0091624"}


id: PBO:0017470
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_after","termid":"PBO:0017470"}


id: GO:0042991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor import into nucleus (obsolete GO:0042991)","synonyms":[{"name":"transcription factor import into cell nucleus","type":"exact"},{"name":"transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"transcription factor-nucleus import","type":"exact"}],"termid":"GO:0042991"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: PBO:0000787
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q deficiency","termid":"PBO:0000787"}


id: PBO:0082793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U2 snRNP; required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing; diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0082793"}


id: FYPO:0004778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal farnesyltranstransferase activity","termid":"FYPO:0004777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased farnesyltranstransferase activity","synonyms":[{"name":"reduced farnesyltranstransferase activity","type":"exact"}],"termid":"FYPO:0004778"}


id: PBO:0055548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2984","termid":"PBO:0055548"}


id: FYPO:0000470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mating type switching is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating type switching","synonyms":[{"name":"decreased mating type switching during mitotic cell cycle","type":"related"},{"name":"decreased mating type switching during vegetative growth","type":"exact"},{"name":"mating type switching: decreased","type":"related"},{"name":"reduced mating type switching","type":"exact"}],"termid":"FYPO:0000470"}


id: PBO:0065303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 16","termid":"PBO:0065303"}


id: PBO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A1","termid":"PBO:0048854"}


id: GO:0061479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reverse transcriptase inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reverse transcriptase inhibitor","termid":"GO:0061479"}


id: PBO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 23","termid":"PBO:0043155"}


id: PR:Q9UTA0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.11c gene.","definition_xrefs":["UniProtKB:Q9UTA0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.11c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.11c","synonyms":[{"name":"Spom972h-SPAC27E2.11c","type":"exact"}],"termid":"PR:Q9UTA0"}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: PBO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8","termid":"PBO:0002437"}


id: PBO:0082714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the nonsense-mediated mRNA decay (NMD) pathway; along with Nam7p and Nmd2p; involved in decay of mRNA containing nonsense codons; involved in telomere maintenance","termid":"PBO:0082714"}


id: PBO:0082333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter; multidrug transporter involved in multiple drug resistance; mediates sterol uptake when sterol biosynthesis is compromised; regulated by Pdr1p; required for anaerobic growth; PDR11 has a paralog, AUS1, that arose from the whole genome duplication","termid":"PBO:0082333"}


id: FYPO:0006822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and elongates at a normal rate, but divides when a shorter time than normal has elapsed since the previous cell division. Daughter cells therefore have an abnormally low volume. Note that these small viable cells result from a cell cycle size regulation defect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"has_part","term_name":"normal vegetative cell growth rate","termid":"FYPO:0006819"},{"relation_name":"is_a","term_name":"viable small vegetative cell","termid":"FYPO:0000648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000257","FYPO:0000004","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"viable small vegetative cell with normal cell growth rate","synonyms":[{"name":"mitosis with small cell size and normal cell growth rate","type":"related"},{"name":"reduced size at cell division with normal cell growth rate","type":"related"},{"name":"small viable vegetative cell with normal cell growth rate","type":"exact"},{"name":"viable small cell with normal cell growth rate during vegetative growth","type":"exact"},{"name":"viable small vegetative cell with normal cell growth rate","type":"broad"},{"name":"viable small vegetative cell with normal cell growth rate during mitotic cell cycle","type":"related"},{"name":"viable small vegetative cell with premature mitosis","type":"exact"},{"name":"wee","type":"exact"}],"termid":"FYPO:0006822"}


id: PATO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an bearer by virtue of how that bearer interacts with radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation quality","termid":"PATO:0001739"}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: PBO:0011497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin, rRNA methyltransferase","termid":"PBO:0011497"}


id: FYPO:0007919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of RNA is abnormal. RNA alternative polyadenylation generates RNA molecules with variable 3'-end lengths from a given RNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}


id: GO:0008348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an antimicrobial humoral response.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial humoral response","secondary_identifiers":["GO:0042155","GO:0042154"],"synonyms":[{"name":"attenuation of antimicrobial humoral response","type":"exact"},{"name":"down regulation of antimicrobial humoral response","type":"exact"},{"name":"down-regulation of antimicrobial humoral response","type":"exact"},{"name":"downregulation of antimicrobial humoral response","type":"exact"},{"name":"inhibition of antimicrobial humoral response","type":"narrow"}],"termid":"GO:0008348"}


id: PR:O13920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm28 gene.","definition_xrefs":["UniProtKB:O13920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LETM1 domain-containing protein mdm28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.17","synonyms":[{"name":"Spom972h-mdm28","type":"exact"}],"termid":"PR:O13920"}


id: GO:1905323
data:
  {"annotated_genes":["SJAG_05240","SJAG_01327","SJAG_05979","SJAG_03954","SJAG_03070","SJAG_02469","SJAG_01819","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91429,101786,103950,110229,111137,111675],"is_not":false,"summary":null,"term":"GO:1905323"},{"annotations":[103351,86344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904868"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomerase holoenzyme complex.","definition_xrefs":["PMID:26305931","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03954":null,"SJAG_04586":null,"SJAG_05240":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"telomerase holoenzyme complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomerase holoenzyme complex formation","type":"exact"}],"termid":"GO:1905323","terms_by_termid":{"GO:1904868":null,"GO:1905323":null}}


id: PR:O14256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.10c","synonyms":[{"name":"Spom972h-SPAC6G10.10c","type":"exact"}],"termid":"PR:O14256"}


id: GO:0016081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial (indirect) attachment of a synaptic vesicle membrane to the presynaptic active zone membrane, mediated by proteins protruding from the membrane and proteins of the presynaptic active zone cytoplasmic component. Synaptic vesicle tethering is the first step in this process.","definition_xrefs":["PMID:15217342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192","GO:0140056","GO:0023052"],"is_obsolete":false,"name":"synaptic vesicle docking","synonyms":[{"name":"synaptic vesicle docking during exocytosis","type":"related"},{"name":"synaptic vesicle docking involved in exocytosis","type":"exact"}],"termid":"GO:0016081"}


id: PBO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 66","termid":"PBO:0071225"}


id: PBO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide-1-phosphate transfer protein","termid":"PBO:0043841"}


id: PBO:0058953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK interacting serine/threonine kinase 1","termid":"PBO:0058953"}


id: PBO:0085519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21A has a paralog, RPS21B, that arose from the whole genome duplication","termid":"PBO:0085519"}


id: PBO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HUNK antisense RNA 1","termid":"PBO:0050809"}


id: GO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NAD(P)+ = succinyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["GOC:mah","EC:1.2.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}


id: FYPO:0007366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-bisphosphoglyceric acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular bisphosphoglyceric acid level","termid":"FYPO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular 2,3-bisphosphoglyceric acid level","synonyms":[{"name":"decreased cellular 2,3-bisphosphoglycerate level","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 2,3-bisphosphoglyceric acid level during vegetative growth","type":"exact"},{"name":"decreased cellular 2-/3-bisphosphoglyceric acid level","type":"exact"},{"name":"decreased level of 2,3-bisphosphoglyceric acid in cell","type":"exact"},{"name":"reduced cellular 2,3-bisphosphoglyceric acid level","type":"exact"}],"termid":"FYPO:0007366"}


id: GO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the right ventricular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003221"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right ventricular trabecular myocardium morphogenesis","termid":"GO:0003227"}


id: PBO:0050534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase","termid":"PBO:0050534"}


id: PATO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes through the center of a circle and whose endpoints are on the circular boundary.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Diameter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diameter","termid":"PATO:0001334"}


id: PBO:0059071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1 pseudogene 1","termid":"PBO:0059071"}


id: PR:Q10137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.10","synonyms":[{"name":"PI/PC TP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo20","type":"exact"},{"name":"phosphatidylinositol/phosphatidyl-choline transfer protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10137"}


id: PBO:0091461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3","termid":"PBO:0091461"}


id: GO:0120070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any stomach fundus smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomach fundus smooth muscle contraction","termid":"GO:0120068"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach fundus smooth muscle contraction","termid":"GO:0120070"}


id: PBO:0062855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otolin 1","termid":"PBO:0062855"}


id: PBO:0062549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily N member 1 pseudogene","termid":"PBO:0062549"}


id: PBO:0059942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 28","termid":"PBO:0059942"}


id: GO:0046776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal processing and presentation of a peptide antigen on its cell surface in association with an MHC class I transmembrane protein complex. One mechanism of suppression is by direct inhibition of host tapasin, a type I transmembrane protein essential for the optimal expression of stable MHC class I molecules on the host cell surface. By inhibiting host tapasin activity, some viruses can prevent presentation of their antigens at the cell surface, and thereby evade the host anti-viral immune response.","definition_xrefs":["GOC:add","GOC:bf","PMID:10227971","PMID:10859382","PMID:9175839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host antigen processing and presentation","termid":"GO:0039588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I","secondary_identifiers":["GO:0039591"],"synonyms":[{"name":"inhibition of host MHC class I molecule presentation by virus","type":"narrow"},{"name":"negative regulation by virus of MHC class I cell surface presentation","type":"narrow"},{"name":"suppression by virus of MHC class I cell surface presentation in host","type":"narrow"},{"name":"suppression by virus of host MHC class I cell surface presentation","type":"narrow"},{"name":"suppression by virus of host antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"suppression by virus of host tapasin activity","type":"narrow"}],"termid":"GO:0046776"}


id: PBO:0108602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-device_utilizes_material","termid":"PBO:0108602"}


id: PBO:0028835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028835"}


id: GO:0099130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"estrogen binding","termid":"GO:0099130"}


id: PBO:0058465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5194","termid":"PBO:0058465"}


id: PBO:0080373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 3","termid":"PBO:0080373"}


id: PBO:0038936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 4 (class II), pi polypeptide","termid":"PBO:0038936"}


id: FYPO:0001361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal amino acid import during vegetative growth","synonyms":[{"name":"abnormal amino acid import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal amino acid import during mitotic cell cycle","type":"related"},{"name":"abnormal amino acid import into cell during vegetative growth","type":"exact"},{"name":"abnormal amino acid uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001361"}


id: PBO:0085073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-transcribed region of the rDNA repeat between the 3'ETS and RDN5; required for rDNA repeat expansion; contains RNA polymerase I termination site","termid":"PBO:0085073"}


id: GO:0006474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid acetylation","synonyms":[{"name":"N(alpha)-terminal acetylation","type":"narrow"}],"termid":"GO:0006474"}


id: GO:0060055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph","PMID:15039218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiogenesis involved in wound healing","termid":"GO:0060055"}


id: PBO:0077231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 7","termid":"PBO:0077231"}


id: PBO:0027468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endocytosis","termid":"PBO:0027468"}


id: PBO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 6","termid":"PBO:0042993"}


id: PATO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000306 absolute age value (obsolete PATO:0000306)","termid":"PATO:0000306"}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["GOC:mah","PMID:25043379","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: GO:1903148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any uracil transmembrane transporter activity that is involved in uracil import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil transmembrane transporter activity involved in uracil import into cell (obsolete GO:1903148)","synonyms":[{"name":"uracil transmembrane transporter activity involved in uracil import into cell","type":"exact"},{"name":"uracil/uridine permease activity involved in uracil import into cell","type":"related"}],"termid":"GO:1903148"}


id: PBO:0042192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D2 pseudogene 1","termid":"PBO:0042192"}


id: PBO:0091344
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as caf4, with both caf4 and mdv1 as S. cerevisiae orthologs","termid":"PBO:0091344"}


id: GO:0062085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"},{"relation_name":"is_a","term_name":"positive regulation of capsule organization","termid":"GO:1901915"},{"relation_name":"positively_regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062085"}


id: PBO:0080550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 9","termid":"PBO:0080550"}


id: PBO:0051526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 2","termid":"PBO:0051526"}


id: GO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in a fully developed and mature organism, as described in insects.","definition_xrefs":["GOC:go_curators","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete adult feeding behavior (sensu Insecta) (obsolete GO:0030535)","synonyms":[{"name":"adult feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0030535"}


id: PBO:0063872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 1","termid":"PBO:0063872"}


id: PBO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23 (predicted)","termid":"PBO:0001360"}


id: GO:0010561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"},{"relation_name":"negatively_regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"}


id: PBO:0042366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule","termid":"PBO:0042366"}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: GO:0005114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II transforming growth factor beta receptor.","definition_xrefs":["GOC:ceb","GOC:mah","PMID:11252892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type II transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta type II binding","type":"exact"},{"name":"punt binding","type":"narrow"},{"name":"punt ligand","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"},{"name":"transforming growth factor beta receptor type II binding","type":"exact"},{"name":"type II TGF-beta binding","type":"exact"}],"termid":"GO:0005114"}


id: PR:O94609
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like modifier-activating enzyme 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF4","PRO:DNx","OMA:SCHPO03896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-activating enzyme E1 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.21c","secondary_identifiers":["UniProtKB:O94609"],"synonyms":[{"name":"Spom972h-UBA1","type":"exact"},{"name":"poly(A)+ RNA transport protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94609"}


id: FYPO:0007898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the length of actin filaments in the contractile ring is shorter than normal.","definition_xrefs":["PMID:34613787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"decreased actomyosin contractile ring actin filament length","termid":"FYPO:0007898"}


id: PBO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex_of_cell_tip","termid":"PBO:0036051"}


id: PBO:0016118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific polypeptide Pc","termid":"PBO:0016118"}


id: PBO:0026647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_mitotic_S_phase","termid":"PBO:0026647"}


id: PBO:0058710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6838","termid":"PBO:0058710"}


id: GO:0061220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric macula densa over time, from its formation to the mature structure. The mesonephric macula densa is an area of specialized cells in the distal tubule of the mesonephros that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"macula densa development","termid":"GO:0072024"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric macula densa development","termid":"GO:0061220"}


id: PBO:0049507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 14","termid":"PBO:0049507"}


id: GO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to linoleic acid","synonyms":[{"name":"response to linoleate","type":"exact"}],"termid":"GO:0070543"}


id: PBO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 40","termid":"PBO:0044353"}


id: GO:0008213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an alkyl group to a protein amino acid. Alkyl groups are derived from alkanes by removal of one hydrogen atom.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein alkylation","synonyms":[{"name":"protein amino acid alkylation","type":"exact"}],"termid":"GO:0008213"}


id: PBO:0011066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family helicase","termid":"PBO:0011066"}


id: GO:0070311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains eight subunits in common with the SWI/SNF complex, plus the ATPase BRG1 (SMARCA4) and the histone methyltransferase CARM1; the complex is involved in regulating nuclear receptor-dependent transcription.","definition_xrefs":["PMID:14729568","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"nucleosomal methylation activator complex","synonyms":[{"name":"NUMAC","type":"exact"}],"termid":"GO:0070311"}


id: GO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which seed mucilage expands through hydration and breaks the outer cell wall that encapsulates the whole seed upon imbibition. Mucilage, mainly composed of pectins, is formed during seed development and deposited into the apoplast underneath the outer wall of the seed coat.","definition_xrefs":["PMID:18266922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed germination","termid":"GO:0009845"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage extrusion from seed coat","synonyms":[{"name":"mucilage release from seed coat","type":"related"},{"name":"secretion of mucilage from seed coat","type":"related"}],"termid":"GO:0080001"}


id: PBO:0067000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 4, pseudogene","termid":"PBO:0067000"}


id: PBO:0061156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NmrA like redox sensor 1","termid":"PBO:0061156"}


id: PBO:0017609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transmembrane transporter Amt2","termid":"PBO:0017609"}


id: PBO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO3B antisense RNA 1","termid":"PBO:0060333"}


id: PBO:0041899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 4","termid":"PBO:0041899"}


id: SO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing a box H/ACA sequence motif, guiding the pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_scaRNA","synonyms":[{"name":"H/ACA scaRNA","type":"exact"}],"termid":"SO:0002370"}


id: GO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate channel activity (obsolete GO:0015256)","synonyms":[{"name":"monocarboxylate channel activity","type":"exact"}],"termid":"GO:0015256"}


id: MOD:01945
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)-3-sulfanylpropanoic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following cysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","termid":"MOD:01945"}


id: GO:0044583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellotriose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide binding","termid":"GO:0048031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellotriose binding","termid":"GO:0044583"}


id: PBO:0064263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing B2","termid":"PBO:0064263"}


id: PBO:0091000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27, zinc-binding domain superfamily (S27-like)","termid":"PBO:0091000"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: GO:0070998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gravitational stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of gravity","termid":"GO:0070998"}


id: GO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["UM-BBD_pathwayID:mcr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cresol metabolic process","synonyms":[{"name":"cresol metabolism","type":"exact"},{"name":"hydroxytoluene metabolic process","type":"exact"},{"name":"hydroxytoluene metabolism","type":"exact"}],"termid":"GO:0042212"}


id: PBO:0034310
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_origin","termid":"PBO:0034310"}


id: PBO:0038926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L1","termid":"PBO:0038926"}


id: PR:P0CT39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-6 gene.","definition_xrefs":["UniProtKB:P0CT39","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-6 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.08","synonyms":[{"name":"Spom972h-Tf2-6","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT39"}


id: PBO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.24","termid":"PBO:0015259"}


id: PBO:0078284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 17-1","termid":"PBO:0078284"}


id: GO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell proliferation","synonyms":[{"name":"negative regulation of heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060044"}


id: GO:0010260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that occurs in an animal organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete animal organ senescence (obsolete GO:0010260)","termid":"GO:0010260"}


id: PBO:0040547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta 3-glucosyltransferase","termid":"PBO:0040547"}


id: PBO:0049458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 3","termid":"PBO:0049458"}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: GO:0140485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 5-aminolevulinic acid from one side of a membrane to the other.","definition_xrefs":["PMID:31989647","RHEA:64816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"5-aminolevulinic acid transmembrane transporter activity","termid":"GO:0140485"}


id: PBO:0003431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monooxygenase Coq6 (predicted)","termid":"PBO:0003431"}


id: PBO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_many_to_many_orthology_relationship_with","termid":"PBO:0034382"}


id: FYECO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cobalt chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CoCl2","synonyms":[{"name":"+ cobalt chloride","type":"exact"}],"termid":"FYECO:0000311"}


id: PBO:0069534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 804, pseudogene","termid":"PBO:0069534"}


id: GO:0050225
data:
  {"annotated_genes":["SJAG_03213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100940],"is_not":false,"summary":null,"term":"GO:0050225"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pseudouridine = ADP + 2 H+ + pseudouridine 5'-phosphate.","definition_xrefs":["RHEA:22448","EC:2.7.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"pseudouridine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PSEUDOURIDINE-KINASE-RXN","KEGG_REACTION:R03315"],"synonyms":[{"name":"ATP:pseudouridine 5'-phosphotransferase activity","type":"related"},{"name":"pseudouridine kinase (phosphorylating)","type":"related"}],"termid":"GO:0050225","terms_by_termid":{"GO:0050225":null}}


id: PBO:0072029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10","termid":"PBO:0072029"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: PBO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 55","termid":"PBO:0070589"}


id: FYPO:0004920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a catalytic activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of molecular function","termid":"FYPO:0004919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of catalytic activity","synonyms":[{"name":"normal regulation of catalytic activity during mitotic cell cycle","type":"related"},{"name":"normal regulation of catalytic activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004920"}


id: PR:P79063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic peptide chain release factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01942","PANTHER:PTHR10113:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic peptide chain release factor subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.01","secondary_identifiers":["UniProtKB:P79063"],"synonyms":[{"name":"Spom972h-ETF1","type":"exact"},{"name":"eRF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic release factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79063"}


id: PBO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SLC5A family","termid":"PBO:0011471"}


id: GO:0005946
data:
  {"annotated_genes":["SJAG_01531","SJAG_00129","SJAG_01862","SJAG_04859","SJAG_01646","SJAG_00182","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73482,73947,75179,77766,78023,78612,106854],"is_not":false,"summary":null,"term":"GO:0005946"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses alpha,alpha-trehalose-phosphate synthase (UDP-forming) and trehalose-phosphatase activities, and thus catalyzes two reactions in trehalose biosynthesis. In the complex identified in Saccharomyces, Tps1p has alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, Tps2p has trehalose 6-phosphate phosphatase activity; Tps3p is a regulatory subunit, and an additional subunit, Tsl1p, may be present.","definition_xrefs":["PMID:9837904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose-glucosephosphate glucosyltransferase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase/phosphatase","type":"exact"}],"termid":"GO:0005946","terms_by_termid":{"GO:0005946":null}}


id: GO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of embryonic development","termid":"GO:0045992"},{"relation_name":"is_a","term_name":"regulation of dermatome development","termid":"GO:0061183"},{"relation_name":"negatively_regulates","term_name":"dermatome development","termid":"GO:0061054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dermatome development","termid":"GO:0061185"}


id: PR:Q2HQL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.14c gene.","definition_xrefs":["UniProtKB:Q2HQL6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1347.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.14c","synonyms":[{"name":"Spom972h-SPBC1347.14c","type":"exact"}],"termid":"PR:Q2HQL6"}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: PBO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 6","termid":"PBO:0050304"}


id: PBO:0049558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 20, pseudogene","termid":"PBO:0049558"}


id: PR:Q08I43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3'-5' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exonuclease eri1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.08","secondary_identifiers":["UniProtKB:Q08I43"],"synonyms":[{"name":"Spom972h-ERI1","type":"exact"},{"name":"enhanced RNAi protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q08I43"}


id: PBO:0057389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548c","termid":"PBO:0057389"}


id: GO:0014864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a muscle activity stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle activity","termid":"GO:0014850"},{"relation_name":"is_a","term_name":"detection of activity","termid":"GO:0014865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muscle activity","termid":"GO:0014864"}


id: PBO:0055696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LKAAEAR motif containing 1","termid":"PBO:0055696"}


id: GO:0010846
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103385],"is_not":false,"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that starts the inactive process of reciprocal meiotic recombination. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of reciprocal meiotic recombination","termid":"GO:0010845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"activation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic recombination","type":"related"}],"termid":"GO:0010846","terms_by_termid":{"GO:0010846":null}}


id: PBO:0076620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor C","termid":"PBO:0076620"}


id: GO:0042743
data:
  {"annotated_genes":["SJAG_04823","SJAG_03166","SJAG_01216","SJAG_01199","SJAG_04953","SJAG_00141","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90797,100486,95523,113479,104233,112592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[104234,71035,70283,75108,90799,95525,100487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:jl","PMID:21734470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"H2O2 metabolic process","type":"exact"},{"name":"hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0042743","terms_by_termid":{"GO:0042744":null,"GO:0061692":null}}


id: PBO:0047352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 5","termid":"PBO:0047352"}


id: PBO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YOR212W is not functional ortholog","termid":"PBO:0003635"}


id: PBO:0017560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase Tcd1 (predicted)","termid":"PBO:0017560"}


id: GO:0102456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-sinapoyl-beta-D-glucose = cyanin betaine + trans-sinapate + H+.","definition_xrefs":["EC:2.4.1.299","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 5-O-glucosyltransferase (sinapoyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-13967"],"termid":"GO:0102456"}


id: GO:1902813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GO_REF:0000058","GOC:mr","PMID:10499580","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902813)","synonyms":[{"name":"down regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"down regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"down-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"downregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"inhibition of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"inhibition of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"inhibition of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"negative regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"negative regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902813"}


id: PBO:0052152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 2","termid":"PBO:0052152"}


id: PBO:0040804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e41","termid":"PBO:0040804"}


id: PBO:0076513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 14","termid":"PBO:0076513"}


id: PBO:0030497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_iron-sulfur_cluster_binding","termid":"PBO:0030497"}


id: GO:0071336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hair follicle cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"hair follicle cell proliferation","termid":"GO:0071335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle cell proliferation","termid":"GO:0071336"}


id: PBO:0052246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 15","termid":"PBO:0052246"}


id: GO:1990669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around an ERGIC-derived vesicle to the lipid bilayer membrane of the ER. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum","termid":"GO:0048279"},{"relation_name":"part_of","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane","synonyms":[{"name":"ER-Golgi intermediate compartment derived vesicle fusion with ER membrane","type":"exact"},{"name":"endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with ER membrane","type":"exact"}],"termid":"GO:1990669"}


id: GO:0035276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ethanol, CH(3)-CH(2)-OH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ethanol binding","termid":"GO:0035276"}


id: GO:0032444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally active complex that binds to an activin response element (ARE) in the promoter of target genes, and is composed of two SMAD2 proteins, one SMAD4 protein and a Forkhead activin signal transducer (FAST) transcription factor.","definition_xrefs":["PMID:12374795","PMID:9288972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"activin responsive factor complex","synonyms":[{"name":"ARF complex","type":"exact"}],"termid":"GO:0032444"}


id: PR:Q7Z9I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.08c","synonyms":[{"name":"Spom972h-SPCC663.08c","type":"exact"}],"termid":"PR:Q7Z9I3"}


id: PR:P87118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase C3A12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.02","secondary_identifiers":["UniProtKB:P87118"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA1","type":"exact"},{"name":"pyrophosphate phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87118"}


id: PBO:0012237
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterododecameric","termid":"PBO:0012237"}


id: PR:Q10156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lkh1 gene.","definition_xrefs":["UniProtKB:Q10156","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase lkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.11c","synonyms":[{"name":"Spom972h-lkh1","type":"exact"}],"termid":"PR:Q10156"}


id: PBO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta Nda3","termid":"PBO:0004744"}


id: RO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a material entity and a process where the material entity has some causal role that influences the process","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_agent_in","termid":"RO:0002500"}


id: PBO:0064311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate binding protein","termid":"PBO:0064311"}


id: GO:0009634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal sensitivity/resistance (obsolete GO:0009634)","synonyms":[{"name":"heavy metal sensitivity/resistance","type":"exact"}],"termid":"GO:0009634"}


id: GO:0033274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B2 stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B2","synonyms":[{"name":"response to riboflavin","type":"exact"}],"termid":"GO:0033274"}


id: GO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinyl palmitate + H2O = 11-cis-retinol + H+ + palmitate.","definition_xrefs":["RHEA:19697","EC:3.1.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"11-cis-retinyl-palmitate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03049","MetaCyc:11-CIS-RETINYL-PALMITATE-HYDROLASE-RXN","Reactome:R-HSA-2465941"],"synonyms":[{"name":"11-cis-retinol palmitate esterase activity","type":"related"},{"name":"11-cis-retinyl-palmitate acylhydrolase activity","type":"related"},{"name":"RPH","type":"related"}],"termid":"GO:0047520"}


id: FYPO:0002925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CRE promoter in a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromosome at CRE promoter","synonyms":[{"name":"decreased protein localisation to chromosome at CRE promoter","type":"exact"},{"name":"decreased protein localization to M26 site","type":"exact"},{"name":"decreased protein localization to chromosome at CRE promoter during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromosome at CRE promoter during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromosome at CRE promoter","type":"exact"}],"termid":"FYPO:0002925"}


id: SO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The start of the clone insert.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_insert_start","synonyms":[{"name":"clone insert start","type":"exact"}],"termid":"SO:0000179"}


id: PBO:0041729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMK2G antisense RNA 1","termid":"PBO:0041729"}


id: PBO:0086701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in phosphatase regulation and/or generation of precursor metabolites and energy","termid":"PBO:0086701"}


id: GO:0102674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-methylenelophenol + a demethylated methyl acceptor = 9xi-episterol + a methylated methyl acceptor.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-demethylase activity (obsolete GO:0102674)","secondary_identifiers":["MetaCyc:RXN-4181"],"termid":"GO:0102674"}


id: GO:0035408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a threonine residue at position 6 of the histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-T6 phosphorylation (obsolete GO:0035408)","termid":"GO:0035408"}


id: PBO:0074497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAP25 antisense RNA 1","termid":"PBO:0074497"}


id: GO:1901800
data:
  {"annotated_genes":["SJAG_01489","SJAG_01131","SJAG_00071","SJAG_00712","SJAG_02723","SJAG_03048","SJAG_00642","SJAG_04477","SJAG_03699","SJAG_01210","SJAG_00766","SJAG_01544"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61389,65490,67227,67432,68383,68941],"is_not":false,"summary":null,"term":"GO:1901800"},{"annotations":[84698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[104292,97879,102091,107056,112309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["GOC:BHF","PMID:21669198","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"positive regulation of proteolysis involved in protein catabolic process","termid":"GO:1903052"},{"relation_name":"positively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of proteasomal protein catabolic process","type":"narrow"},{"name":"activation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"activation of proteasome-mediated protein catabolism","type":"exact"},{"name":"positive regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"positive regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"up regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"up regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"up-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"up-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"upregulation of proteasomal protein catabolic process","type":"exact"},{"name":"upregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"upregulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901800","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1905786":null}}


id: GO:0018554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxynaphthalene + O2 = 2-hydroxychromene-2-carboxylate. C6 of the substrate molecular may have an NH2 group attached.","definition_xrefs":["UM-BBD_enzymeID:e0255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"},{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-dihydroxynaphthalene dioxygenase activity","secondary_identifiers":["RHEA:27310","EC:1.13.11.56"],"termid":"GO:0018554"}


id: GO:1900422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of cellular alcohol catabolic process.","definition_xrefs":["PMID:3305157","PMID:8221926","GOC:TermGenie","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900422)","synonyms":[{"name":"activation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900422"}


id: PBO:0090812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator, C-terminal","termid":"PBO:0090812"}


id: FYPO:0006355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription begins later than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of transcription during glucose starvation","synonyms":[{"name":"delayed onset of transcription during cellular response to glucose starvation","type":"exact"},{"name":"delayed onset of transcription during glucose depletion","type":"exact"},{"name":"delayed onset of transcription during glucose deprivation","type":"exact"},{"name":"delayed onset of transcription during glucose limitation","type":"related"},{"name":"delayed onset of transcription in response to glucose starvation","type":"exact"},{"name":"delayed transcription during glucose starvation","type":"exact"}],"termid":"FYPO:0006355"}


id: PBO:0049814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 6","termid":"PBO:0049814"}


id: PBO:0067675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 860, pseudogene","termid":"PBO:0067675"}


id: GO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a semicircular canal epithelial cell acquires the structural features that allow it to contribute to the process of semicircular canal fusion.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal fusion","termid":"GO:0060879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in semicircular canal fusion","termid":"GO:0060880"}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: GO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 27 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 acetylation (obsolete GO:0043974)","synonyms":[{"name":"histone H3 acetylation at K27","type":"exact"},{"name":"histone H3K27 acetylation","type":"exact"}],"termid":"GO:0043974"}


id: PBO:0036005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036005"}


id: GO:0019196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galactosamine from one side of a membrane to the other. Galactosamine is an aminodeoxysugar; D-galactosamine is a constituent of some glycolipids and glycosaminoglycans, commonly as its N-acetyl derivative.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"galactosamine transmembrane transporter activity","secondary_identifiers":["GO:0019195"],"synonyms":[{"name":"galactosamine porter activity","type":"exact"}],"termid":"GO:0019196"}


id: PBO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3","termid":"PBO:0033815"}


id: PBO:0074389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smooth muscle induced lncRNA, enhancer of proliferation","termid":"PBO:0074389"}


id: PBO:0069985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1280, pseudogene","termid":"PBO:0069985"}


id: PATO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"young","termid":"PATO:0000309"}


id: SO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base pair region at the 5' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:splice_donor_variant","type":"exact"},{"name":"Seattleseq:splice-donor","type":"exact"},{"name":"VAAST:splice_donor_variant","type":"exact"},{"name":"VEP:splice_donor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_DONOR","type":"exact"},{"name":"splice donor variant","type":"exact"}],"termid":"SO:0001575"}


id: GO:0004664
data:
  {"annotated_genes":["SJAG_03124"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76841],"is_not":false,"summary":null,"term":"GO:0004664"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: prephenate = phenylpyruvate + H2O + CO2.","definition_xrefs":["EC:4.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03124":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"prephenate dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:21648","MetaCyc:PREPHENATEDEHYDRAT-RXN"],"synonyms":[{"name":"prephenate hydro-lyase (decarboxylating)","type":"related"},{"name":"prephenate hydro-lyase (decarboxylating; phenylpyruvate-forming)","type":"related"}],"termid":"GO:0004664","terms_by_termid":{"GO:0004664":null}}


id: PBO:0005778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Sec65 (predicted)","termid":"PBO:0005778"}


id: PBO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130 (predicted)","termid":"PBO:0002329"}


id: GO:0036088
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77682],"is_not":false,"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-serine, the D-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-serine metabolic process","termid":"GO:0070178"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"D-serine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-serine breakdown","type":"exact"},{"name":"D-serine catabolism","type":"exact"},{"name":"D-serine degradation","type":"exact"}],"termid":"GO:0036088","terms_by_termid":{"GO:0036088":null}}


id: FYPO:0007568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during anaphase.","definition_xrefs":["PomBase:mah","PMID:11384993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0005709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to spindle pole body during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007568"}


id: PBO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-39","termid":"PBO:0075028"}


id: PBO:0059863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin 1","termid":"PBO:0059863"}


id: PR:Q10219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.12c","synonyms":[{"name":"Spom972h-SPAC4H3.12c","type":"exact"}],"termid":"PR:Q10219"}


id: PBO:0066493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 4","termid":"PBO:0066493"}


id: GO:0045104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"intermediate filament-based process","termid":"GO:0045103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"intermediate filament cytoskeleton organization","synonyms":[{"name":"intermediate filament cytoskeleton organisation","type":"exact"},{"name":"intermediate filament cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0045104"}


id: RO:HOM0000027
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Iterative homology that involves structures arranged along the main body axis.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_iterative_homology_relationship_with","termid":"RO:HOM0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_serial_homology_relationship_with","synonyms":[{"name":"homonomy","type":"related"},{"name":"serial homologous to","type":"exact"}],"termid":"RO:HOM0000027"}


id: MOD:00369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-acetyl-L-serine.","definition_xrefs":["PubMed:489587","ChEBI:17981","Unimod:1#S","PubMed:14730666","PubMed:11999733","PubMed:15350136","RESID:AA0364","PubMed:11857757","PubMed:7309355","PubMed:12175151","PubMed:16731519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-acetyl-L-serine","synonyms":[{"name":"(2S)-3-(acetyloxy)-2-aminopropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylserine","type":"exact"},{"name":"O-acetyl-L-serine","type":"exact"},{"name":"O-acetylated L-serine","type":"exact"},{"name":"O-acetylserine","type":"exact"},{"name":"OAcSer","type":"exact"},{"name":"serine acetate ester","type":"exact"}],"termid":"MOD:00369"}


id: PBO:0041459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 88","termid":"PBO:0041459"}


id: GO:0019079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved directly in viral genome replication, including viral nucleotide metabolism.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome replication","synonyms":[{"name":"sigma virus replication","type":"narrow"},{"name":"viral replication","type":"broad"}],"termid":"GO:0019079"}


id: PBO:0070617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 1","termid":"PBO:0070617"}


id: PBO:0003686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein Mgr2 (predicted)","termid":"PBO:0003686"}


id: PBO:0057207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376a-2","termid":"PBO:0057207"}


id: PBO:0091396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6","termid":"PBO:0091396"}


id: PATO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends later than the natural end time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally extended","termid":"PATO:0001333"}


id: PR:O74553
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 4-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04755","PANTHER:PTHR11082:SF6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.15","secondary_identifiers":["UniProtKB:O74553"],"synonyms":[{"name":"Spom972h-DUS4L","type":"exact"},{"name":"tRNA-dihydrouridine synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74553"}


id: GO:0009916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alternative oxidase activity","termid":"GO:0009916"}


id: PBO:0054439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1836","termid":"PBO:0054439"}


id: FYPO:0005470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal glutamate synthase (NADH) activity","synonyms":[{"name":"abnormal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abnormal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abnormal NADH: GOGAT activity","type":"related"},{"name":"abnormal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005470"}


id: SO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_2prime_O_dimethyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_2_prime_O_dimethyladenosine","secondary_identifiers":["RNAMOD:088"],"synonyms":[{"name":"N6 2 prime O dimethyladenosine","type":"exact"},{"name":"N6,2'-O-dimethyladenosine","type":"exact"},{"name":"m6Am","type":"exact"}],"termid":"SO:0001312"}


id: GO:1900838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"negatively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"inhibition of fumigaclavine C biosynthetic process","type":"narrow"}],"termid":"GO:1900838"}


id: PBO:0070719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 24","termid":"PBO:0070719"}


id: PBO:0082937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic chaperone of the Hsp90 family; plays a role in determining prion variants; redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels than HSP82 and induced 2-3 fold by heat shock; contains two acid-rich unstructured regions that promote the solubility of chaperone-substrate complexes; HSC82 has a paralog, HSP82, that arose from the whole genome duplication","termid":"PBO:0082937"}


id: GO:0007068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription during mitotic cell cycle (obsolete GO:0007068)","synonyms":[{"name":"down regulation of transcription during mitosis","type":"exact"},{"name":"down-regulation of transcription during mitosis","type":"exact"},{"name":"downregulation of transcription during mitosis","type":"exact"},{"name":"inhibition of transcription during mitosis","type":"narrow"},{"name":"mitotic repression of transcription","type":"exact"},{"name":"negative regulation of transcription, mitotic","type":"exact"}],"termid":"GO:0007068"}


id: FYPO:0002939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear mRNA catabolic process","synonyms":[{"name":"normal nuclear mRNA breakdown","type":"exact"},{"name":"normal nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA catabolism","type":"exact"},{"name":"normal nuclear mRNA degradation","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"FYPO:0002939"}


id: PBO:0067277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 356, pseudogene","termid":"PBO:0067277"}


id: GO:0072354
data:
  {"annotated_genes":["SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77135],"is_not":false,"summary":null,"term":"GO:0072354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 3) + ATP = histone H3-phosphothreonine (position 3) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 3 of histone H3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00678":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0004672","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"histone H3T3 kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"histone H3-T3 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-T3 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T3 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T3 specific)","type":"exact"}],"termid":"GO:0072354","terms_by_termid":{"GO:0072354":null}}


id: GO:1990713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that negatively regulates apoptotic processes. In human, this anti-apoptotic complex is a homodimer of BIRC5 (survivin) and provides one survivin molecule to the chromosomal passenger complex (CPC).","definition_xrefs":["GOC:bhm","PMID:10949038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"survivin complex","synonyms":[{"name":"Baculoviral IAP repeat-containing protein 5 complex","type":"exact"},{"name":"survivin homodimer complex","type":"narrow"}],"termid":"GO:1990713"}


id: GO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that solubilizes fibrin in the bloodstream of a multicellular organism, chiefly by the proteolytic action of plasmin.","definition_xrefs":["PMID:15842654","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibrinolysis","secondary_identifiers":["Wikipedia:Fibrinolysis"],"termid":"GO:0042730"}


id: FYPO:0000101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpropham. Cells stop growing (and may die) at a concentration of chlorpropham that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to chlorpropham","synonyms":[{"name":"hypersensitive to chlorpropham","type":"exact"},{"name":"sensitive to chlorpropham during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpropham during vegetative growth","type":"exact"},{"name":"sensitive to isopropyl N-3-chlorophenyl carbamate","type":"exact"},{"name":"sensitive to spindle poison","type":"broad"}],"termid":"FYPO:0000101"}


id: GO:0060179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of a male organism that is associated with reproduction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male mating behavior","termid":"GO:0060179"}


id: PBO:0012860
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsk1 Interacting Molecule","termid":"PBO:0012860"}


id: PBO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 18 member B","termid":"PBO:0043300"}


id: PBO:0084817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; required for respiratory growth; mutant accumulates less glycogen than does wild type; null mutation results in a decrease in plasma membrane electron transport; YIL060W is not an essential gene","termid":"PBO:0084817"}


id: GO:0046332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SMAD signaling protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"SMAD binding","termid":"GO:0046332"}


id: PBO:0065574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase 2","termid":"PBO:0065574"}


id: GO:0019685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A complex cycle of enzyme-mediated reactions which catalyzes the reduction of carbon dioxide to sugar. As well as carbon dioxide the cycle requires reducing power in the form of reduced nicotinamide adenine dinucleotide phosphate (NADP) and chemical energy in the form of adenosine triphosphate (ATP). The reduced NADP (NADPH) and ATP are produced by the 'light' reactions.","definition_xrefs":["ISBN:0582015952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"photosynthesis, dark reaction","termid":"GO:0019685"}


id: PBO:0051476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-66-1 (pseudogene)","termid":"PBO:0051476"}


id: GO:0099635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Positive regulation of presynaptic cytosolic calcium ion concentrations via the directed movement of calcium ions across the plasma-membrane into the cytosol via the action of voltage-gated calcium ion channels. This is the first step in synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in positive regulation of presynaptic cytosolic calcium levels","secondary_identifiers":["Reactome:R-HSA-9659515"],"termid":"GO:0099635"}


id: GO:0009435
data:
  {"annotated_genes":["SJAG_02889","SJAG_02618","SJAG_00957","SJAG_01500","SJAG_04693","SJAG_03298","SJAG_01359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74175,76410],"is_not":false,"summary":null,"term":"GO:0009435"},{"annotations":[86359,70921,108415,86762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[78441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide biosynthetic process","termid":"GO:0019359"},{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"NAD biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006736"],"synonyms":[{"name":"NAD (oxidized) biosynthesis","type":"exact"},{"name":"NAD (oxidized) biosynthetic process","type":"exact"},{"name":"NAD (reduced) biosynthesis","type":"exact"},{"name":"NAD (reduced) biosynthetic process","type":"exact"},{"name":"NAD anabolism","type":"exact"},{"name":"NAD biosynthesis","type":"exact"},{"name":"NAD formation","type":"exact"},{"name":"NAD synthesis","type":"exact"},{"name":"NADH biosynthesis","type":"exact"},{"name":"NADH biosynthetic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"oxidized NAD biosynthesis","type":"exact"},{"name":"oxidized NAD biosynthetic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide biosynthetic process","type":"exact"},{"name":"reduced NAD biosynthesis","type":"exact"},{"name":"reduced NAD biosynthetic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthesis","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide biosynthetic process","type":"exact"}],"termid":"GO:0009435","terms_by_termid":{"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:0071619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group onto a serine residue at position 2 within the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II. Typically, phosphorylation of serine 2 (Ser2) occurs subsequent to phosphorylation of serine 5 and is thus seen in the middle and 3' ends of genes. In vivo, Ser2 phosphorylation is primarily performed by CTDK-I in S. cerevisiae or CDK9 in metazoans.","definition_xrefs":["GOC:krc","PMID:17079683"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:0071619)","termid":"GO:0071619"}


id: GO:1903021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GOC:TermGenie","PMID:12192046","GO_REF:0000059","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:1903021"}


id: PBO:0059756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 30","termid":"PBO:0059756"}


id: MOD:01081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-glycosyloxy- (of lysine) or beta-glycosyloxy- (of phenylalanine or tyrosine)","termid":"MOD:01081"}


id: GO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"}


id: GO:0140740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = ADP-riboxanated L-argininyl-[protein] + H+ + NH4(+) + nicotinamide.","definition_xrefs":["PMID:34671164","RHEA:69500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"},{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016829","GO:0140096"],"is_obsolete":false,"name":"ADP-riboxanase activity","termid":"GO:0140740"}


id: PBO:0026736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_upon_nitrogen_source_shift","termid":"PBO:0026736"}


id: PBO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_chromosome_fragmentation_upon_segregation","termid":"PBO:0031091"}


id: PBO:0085186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two isoforms of the gamma subunit of eEF1B; stimulates the release of GDP from eEF1A (Tef1p/Tef2p) post association with the ribosomal complex with eEF1Balpha subunit; nuclear protein required for transcription of MXR1; binds the MXR1 promoter in the presence of other nuclear factors; binds calcium and phospholipids","termid":"PBO:0085186"}


id: PBO:0067273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 351, pseudogene","termid":"PBO:0067273"}


id: GO:0061324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The canonical Wnt signaling pathway that contributes to the modulation of the expansion of a population of cardiac outflow tract cells.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation (obsolete GO:0061324)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of cardiac outflow tract cell proliferation","type":"exact"}],"termid":"GO:0061324"}


id: PBO:0043920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary rootlet coiled-coil, rootletin","termid":"PBO:0043920"}


id: PATO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's lack of hairs or bristles.","definition_xrefs":["PATOC:GVG","PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glabrous","synonyms":[{"name":"hairless","type":"related"}],"termid":"PATO:0000453"}


id: PBO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 122 (pseudogene)","termid":"PBO:0044834"}


id: PBO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 2B","termid":"PBO:0045695"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: PBO:0077765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 1","termid":"PBO:0077765"}


id: PBO:0085791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; associates with ribosomes and has a putative RNA binding domain; interacts with Tma20p; similar to human GRAP and human DRP1, which interacts with human Tma20p homolog MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0085791"}


id: GO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL3 or MLL4 in mammals, or equivalent in other species.","definition_xrefs":["PMID:21875999","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654","GO:0032991"],"is_obsolete":false,"name":"MLL3/4 complex","synonyms":[{"name":"Trr/COMPASS-like complex","type":"exact"}],"termid":"GO:0044666"}


id: PBO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly internalised","termid":"PBO:0002419"}


id: PBO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 6","termid":"PBO:0061648"}


id: GO:0120122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prolactin, a protein hormone of the anterior pituitary gland that promotes lactation in response to the suckling stimulus of hungry young mammals.","definition_xrefs":["PMID:11015620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin metabolic process","synonyms":[{"name":"prolactin metabolism","type":"exact"}],"termid":"GO:0120122"}


id: PBO:0054969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2383","termid":"PBO:0054969"}


id: GO:1990515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads 3' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.","definition_xrefs":["PMID:24369430","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitive RNA interference","termid":"GO:0036453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3' transitive RNA interference","termid":"GO:1990515"}


id: PR:Q7Z9I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C409.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.08","synonyms":[{"name":"Spom972h-SPBC409.08","type":"exact"}],"termid":"PR:Q7Z9I0"}


id: GO:2000213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"positively_regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate metabolic process","synonyms":[{"name":"positive regulation of glutamate metabolism","type":"exact"},{"name":"positive regulation of glutamic acid metabolic process","type":"exact"},{"name":"positive regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000213"}


id: PBO:0064678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 14","termid":"PBO:0064678"}


id: GO:0022858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alanine from one side of a membrane to the other. Alanine is 2-aminopropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"alanine transmembrane transporter activity","termid":"GO:0022858"}


id: GO:0032593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small membrane-bounded vesicle that releases its contents by exocytosis in response to insulin stimulation; the contents are enriched in GLUT4, IRAP and VAMP2.","definition_xrefs":["PMID:17644329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"insulin-responsive compartment","synonyms":[{"name":"GLUT4 storage compartment","type":"exact"},{"name":"GSC","type":"related"},{"name":"IRC","type":"related"}],"termid":"GO:0032593"}


