# terms

id: PBO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1 (predicted)","termid":"PBO:0002718"}


id: PBO:0055102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2520","termid":"PBO:0055102"}


id: PBO:0053113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1","termid":"PBO:0053113"}


id: GO:1903062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23931754","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of reverse cholesterol transport","termid":"GO:1903062"}


id: GO:0060577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary vein morphogenesis","synonyms":[{"name":"pulmonary venous blood vessel morphogenesis","type":"related"}],"termid":"GO:0060577"}


id: PBO:0068425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1 pseudogene 1","termid":"PBO:0068425"}


id: PBO:0079200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 4","termid":"PBO:0079200"}


id: PBO:0084532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; null mutant has splicing defect and arrests in G2/M; relocalizes to the cytosol in response to hypoxia; homologs in human and C. elegans","termid":"PBO:0084532"}


id: PBO:0027540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning_at_stress_response_genes","termid":"PBO:0027540"}


id: PBO:0046231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 24","termid":"PBO:0046231"}


id: FYPO:0002155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere structure during vegetative growth","synonyms":[{"name":"normal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"normal chromosome structure at telomeric region during vegetative growth","type":"exact"},{"name":"normal telomere structure during mitotic cell cycle","type":"related"},{"name":"normal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002155"}


id: PBO:0071635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 54","termid":"PBO:0071635"}


id: PBO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 47","termid":"PBO:0071441"}


id: GO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxycoumarin + UDP-D-glucose = daphnin + H+ + UDP.","definition_xrefs":["EC:2.4.1.104","RHEA:14325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"o-dihydroxycoumarin 7-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.104-RXN","KEGG_REACTION:R03548"],"synonyms":[{"name":"UDP-glucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:o-dihydroxycoumarin glucosyltransferase activity","type":"related"},{"name":"UDPglucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-o-dihydroxycoumarin 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047208"}


id: PBO:0028020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0028020"}


id: PBO:0089646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras GEF Ste6","termid":"PBO:0089646"}


id: PBO:0058464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5193","termid":"PBO:0058464"}


id: PATO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loose","termid":"PATO:0001802"}


id: PBO:0065617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A3","termid":"PBO:0065617"}


id: GO:1904052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:pad","GOC:TermGenie","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006605","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"down regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"down-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"downregulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"inhibition of protein targeting to vacuole involved in autophagy","type":"narrow"}],"termid":"GO:1904052"}


id: PBO:0045478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin related protein 2","termid":"PBO:0045478"}


id: GO:2000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"positively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior head development","termid":"GO:2000744"}


id: GO:0098688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An excitatory synapse formed by the parallel fibers of granule cells synapsing onto the dendrites of Purkinje cells.","definition_xrefs":["PMID:16623829","PMID:3209740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"parallel fiber to Purkinje cell synapse","termid":"GO:0098688"}


id: GO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway in which the MyD88 adaptor molecule mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:12467241","ISBN:0781735149","PMID:15728447","GOC:add","PMID:12855817","PMID:12524386","PMID:15585605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002755"}


id: GO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoin = 2 benzaldehyde.","definition_xrefs":["EC:4.1.2.38","RHEA:21460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"benzoin aldolase activity","secondary_identifiers":["KEGG_REACTION:R00027","MetaCyc:BENZOIN-ALDOLASE-RXN"],"synonyms":[{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2- activity","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase (benzaldehyde-forming)","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase activity","type":"related"},{"name":"benzaldehyde lyase activity","type":"related"},{"name":"diphenylethanone benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0047695"}


id: FYPO:0002866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tryptone. Cells stop growing (and may die) at a concentration of tryptone that allows wild type cells to grow. Tryptone is a mixture of peptides produced by digestion of casein with trypsin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tryptone","synonyms":[{"name":"hypersensitive to tryptone","type":"exact"},{"name":"sensitive to tryptone during mitotic cell cycle","type":"related"},{"name":"sensitive to tryptone during vegetative growth","type":"exact"}],"termid":"FYPO:0002866"}


id: PBO:0069964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1258, pseudogene","termid":"PBO:0069964"}


id: PBO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AT member 2 pseudogene","termid":"PBO:0061981"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: GO:0008175
data:
  {"annotated_genes":["SJAG_02099","SJAG_03367","SJAG_04993","SJAG_02637","SJAG_02386","SJAG_00255","SJAG_04181","SJAG_01314","SJAG_04680","SJAG_04736","SJAG_00325","SJAG_01269","SJAG_02042","SJAG_04735","SJAG_00886","SJAG_01261","SJAG_05334","SJAG_00499","SJAG_04453","SJAG_01375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71977,73195,90319],"is_not":false,"summary":null,"term":"GO:0008175"},{"annotations":[84345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[107493,96492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160107"},{"annotations":[93425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106339"},{"annotations":[105533,77872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052735"},{"annotations":[70582,78155,101221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016428"},{"annotations":[102692,99625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160102"},{"annotations":[102693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160104"},{"annotations":[102694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160103"},{"annotations":[93426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[96900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052906"},{"annotations":[71172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008176"},{"annotations":[94954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052905"},{"annotations":[93650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[93427,86635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"},{"annotations":[113180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04453":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04993":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0140098","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"tRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786567","Reactome:R-HSA-6782881","Reactome:R-HSA-6786500","Reactome:R-HSA-6782890","Reactome:R-HSA-6783473","Reactome:R-HSA-6782879"],"termid":"GO:0008175","terms_by_termid":{"GO:0008175":null,"GO:0008176":null,"GO:0016428":null,"GO:0030697":null,"GO:0052735":null,"GO:0052905":null,"GO:0052906":null,"GO:0106050":null,"GO:0106335":null,"GO:0106339":null,"GO:0106340":null,"GO:0141101":null,"GO:0160102":null,"GO:0160103":null,"GO:0160104":null,"GO:0160107":null}}


id: PBO:0056142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor family member 3","termid":"PBO:0056142"}


id: PBO:0072630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and SPRY domain containing 1","termid":"PBO:0072630"}


id: GO:1901287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of iron-sulfur-molybdenum cofactor.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"iron-sulfur-molybdenum cofactor metabolic process","termid":"GO:1901286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor catabolic process","synonyms":[{"name":"FeMo-co breakdown","type":"exact"},{"name":"FeMo-co catabolic process","type":"exact"},{"name":"FeMo-co catabolism","type":"exact"},{"name":"FeMo-co degradation","type":"exact"},{"name":"iron-molybdenum breakdown","type":"exact"},{"name":"iron-molybdenum catabolic process","type":"exact"},{"name":"iron-molybdenum catabolism","type":"exact"},{"name":"iron-molybdenum degradation","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor breakdown","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor catabolism","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor degradation","type":"exact"}],"termid":"GO:1901287"}


id: PBO:0084607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YPR090W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YPR089W","termid":"PBO:0084607"}


id: GO:0120271
data:
  {"annotated_genes":["SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85510],"is_not":false,"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.","definition_xrefs":["PMID:24920274","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0120270"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0033621"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467","GO:0044248"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120271","terms_by_termid":{"GO:0120271":null}}


id: PBO:0078612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64C","termid":"PBO:0078612"}


id: GO:0098820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that spans the synaptic cleft and has parts in both the pre- and post-synaptic membranes.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"trans-synaptic protein complex","termid":"GO:0098820"}


id: PBO:0082550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of the peroxisomal importomer complex; peroxisomal protein import machinery docking complex component; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p) peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p","termid":"PBO:0082550"}


id: FYPO:0002212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002212"}


id: PBO:0044802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103A","termid":"PBO:0044802"}


id: PBO:0061886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocytic myelin paranodal and inner loop protein","termid":"PBO:0061886"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: GO:1903624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:2001740","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA catabolic process","synonyms":[{"name":"regulation of DNA breakdown","type":"exact"},{"name":"regulation of DNA catabolism","type":"exact"},{"name":"regulation of DNA degradation","type":"exact"}],"termid":"GO:1903624"}


id: PBO:0074126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 9","termid":"PBO:0074126"}


id: PBO:0063539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEAK family member 3","termid":"PBO:0063539"}


id: PBO:0027327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_surface_pyruvylated_galactose_level","termid":"PBO:0027327"}


id: GO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}


id: GO:0030705
data:
  {"annotated_genes":["SJAG_02761","SJAG_00938","SJAG_05319","SJAG_02336","SJAG_04001","SJAG_00918","SJAG_03011","SJAG_00851","SJAG_03540","SJAG_01546","SJAG_00397","SJAG_00332","SJAG_02737","SJAG_01613","SJAG_03437","SJAG_01211","SJAG_01863","SJAG_01297","SJAG_01370","SJAG_05266","SJAG_03673","SJAG_01371","SJAG_05220","SJAG_01775","SJAG_05185","SJAG_00368","SJAG_02731","SJAG_00140","SJAG_02045","SJAG_02561","SJAG_01662","SJAG_04143","SJAG_03073","SJAG_00113","SJAG_02431","SJAG_04597","SJAG_01224","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106401,83550,96245,90809,86687,109265,87061,98739,106746,112185,87505,93151,98455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[102026,106570],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[96952],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[93226,94785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[93153,87063,94786,83554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90037],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[99232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[95912,99392,113847,103677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[92361,112160,94186,96038,85470,105272,84890,86675,102924,109405,104284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[86836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[70266,73787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00938":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02561":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03011":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_04001":null,"SJAG_04143":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cytoskeleton-dependent intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030705","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030050":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1903563":null,"GO:1990976":null}}


id: GO:0140372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of one or more ubiquitin groups.","definition_xrefs":["PMID:31468675","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3 ubiquitination (obsolete GO:0140372)","synonyms":[{"name":"histone H3 ubiquitylation","type":"exact"}],"termid":"GO:0140372"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: MOD:01821
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex reporter+balance group.","definition_xrefs":["URL:http://www.piercenet.com/files/2162220.pdf","Unimod:985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01821"}


id: GO:0043101
data:
  {"annotated_genes":["SJAG_01070","SJAG_03298","SJAG_03881","SJAG_01859","SJAG_04123","SJAG_03096","SJAG_00134","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[112087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[112088,73469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[74810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[97317,74811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[70063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[78441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[89390,89172,72912,85500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[74812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process that generates a purine-containing compound, any nucleobase, nucleoside, nucleotide or nucleic acid that contains a purine base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound biosynthetic process","termid":"GO:0034654"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03298":null,"SJAG_03881":null,"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"purine-containing compound salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine salvage","type":"related"}],"termid":"GO:0043101","terms_by_termid":{"GO:0006166":null,"GO:0006168":null,"GO:0006169":null,"GO:0006190":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044209":null}}


id: FYPO:0006755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:28934464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"decreased chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"decreased chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"decreased chromatin binding at promoter element during glucose deprivation","type":"related"},{"name":"reduced chromatin binding at promoter element during glucose starvation","type":"exact"}],"termid":"FYPO:0006755"}


id: GO:1990798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a destroyed pancreas.","definition_xrefs":["PMID:1985964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ regeneration","termid":"GO:0031100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas regeneration","termid":"GO:1990798"}


id: PBO:0075446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 1","termid":"PBO:0075446"}


id: PBO:0084225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 (Ssa1p) nucleotide exchange factor; required for the release of misfolded proteins from the Hsp70 system to the Ub-proteasome machinery for degradation; cytosolic homolog of Sil1p, which is the nucleotide exchange factor for BiP (Kar2p) in the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0084225"}


id: PBO:0057825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3144","termid":"PBO:0057825"}


id: PR:O59702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase clr6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.05c","synonyms":[{"name":"Spom972h-clr6","type":"exact"},{"name":"cryptic loci regulator 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59702"}


id: PBO:0087258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; regulates the orientation checkpoint, the morphogenesis checkpoint and the metabolic switch from fermentative to oxidative metabolism by phosphorylating the activation loop of Kin4p, Hsl1p and Snf1p respectively; cooperates with Hsl7p in recruiting Hsl1p to the septin ring, a prerequisite for subsequent recruitment, phosphorylation, and degradation of Swe1p; forms part of the bud neck ring; regulates cytokinesis","termid":"PBO:0087258"}


id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + S-adenosyl-L-methionine = H+ + homoeriodictyol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7753","RHEA:60948"],"termid":"GO:0102761"}


id: PBO:0083879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric enterobactin transmembrane transporter; expressed under conditions of iron deprivation; member of the major facilitator superfamily; expression is regulated by Rcs1p and affected by chloroquine treatment","termid":"PBO:0083879"}


id: PBO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase family","termid":"PBO:0000646"}


id: GO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate","synonyms":[{"name":"circadian regulation of heart contraction rate","type":"related"}],"termid":"GO:0003053"}


id: PBO:0064381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 3","termid":"PBO:0064381"}


id: GO:1905355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a spine apparatus.","definition_xrefs":["GO_REF:0000079","GOC:PARL","PMID:12928494","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"spine apparatus assembly","synonyms":[{"name":"dense material assembly","type":"narrow"},{"name":"dense material formation","type":"narrow"},{"name":"spine apparatus formation","type":"exact"}],"termid":"GO:1905355"}


id: GO:0045102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Peripherin is a type III intermediate filament protein found in neurons of the peripheral nervous system.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete peripherin (obsolete GO:0045102)","synonyms":[{"name":"peripherin","type":"exact"}],"termid":"GO:0045102"}


id: PBO:0046102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 5","termid":"PBO:0046102"}


id: GO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of syncytia-forming cell-cell fusion, caused by a virus.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction by virus of host cell-cell fusion","synonyms":[{"name":"induction by virus of cell-cell fusion in host","type":"exact"},{"name":"viral-induced cell-cell fusion","type":"exact"},{"name":"viral-induced host cell-cell fusion","type":"exact"},{"name":"viral-induced membrane fusion","type":"narrow"}],"termid":"GO:0006948"}


id: GO:0015954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine ribonucleotide is synthesized from another pyrimidine ribonucleotide.","definition_xrefs":["GOC:mah","ISBN:0306444747","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide interconversion","termid":"GO:0015953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide interconversion","termid":"GO:0015954"}


id: GO:2000090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"regulates","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000090"}


id: PBO:0077959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-3","termid":"PBO:0077959"}


id: PBO:0085869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has weak similarity to proteins involved in thiamin metabolism; expression is induced in the absence of thiamin","termid":"PBO:0085869"}


id: GO:0051241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of an organismal process, the processes pertinent to the function of an organism above the cellular level; includes the integrated processes of tissues and organs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"negatively_regulates","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of multicellular organismal process","synonyms":[{"name":"down regulation of multicellular organismal process","type":"exact"},{"name":"down-regulation of multicellular organismal process","type":"exact"},{"name":"downregulation of multicellular organismal process","type":"exact"},{"name":"inhibition of multicellular organismal process","type":"narrow"}],"termid":"GO:0051241"}


id: GO:0036391
data:
  {"annotated_genes":["SJAG_03703","SJAG_00118","SJAG_04375","SJAG_01277","SJAG_03374","SJAG_04703","SJAG_00663","SJAG_02645","SJAG_01658","SJAG_04566"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93391,93466,95629,96478,97272,99405,103371,108097,113084,113815],"is_not":false,"summary":null,"term":"GO:0036391"}]},"cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the medial cortex of a symmetrically dividing cell at the onset of cytokinesis; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins.","definition_xrefs":["GOC:vw","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"medial cortex septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036391","terms_by_termid":{"GO:0036391":null}}


id: PBO:0067472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 602, pseudogene","termid":"PBO:0067472"}


id: PBO:0040980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1","termid":"PBO:0040980"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: PBO:0077570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 276","termid":"PBO:0077570"}


id: GO:1904018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie","PMID:21472453","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"positively_regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculature development","synonyms":[{"name":"activation of vascular system development","type":"related"},{"name":"activation of vasculature development","type":"narrow"},{"name":"positive regulation of vascular system development","type":"related"},{"name":"up regulation of vascular system development","type":"related"},{"name":"up regulation of vasculature development","type":"exact"},{"name":"up-regulation of vascular system development","type":"related"},{"name":"up-regulation of vasculature development","type":"exact"},{"name":"upregulation of vascular system development","type":"related"},{"name":"upregulation of vasculature development","type":"exact"}],"termid":"GO:1904018"}


id: PBO:0089152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim14","termid":"PBO:0089152"}


id: GO:0009428
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the rings of the bacterial-type flagellar basal body; anchors the basal body to the peptidoglycan layer.","definition_xrefs":["GOC:mtg_sensu","PMID:10572114","PMID:12624192","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, distal rod","termid":"GO:0009426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, distal rod, P ring","synonyms":[{"name":"flagellar basal body, distal rod, P ring","type":"related"},{"name":"flagellin-based flagellum basal body, distal rod, P ring","type":"exact"}],"termid":"GO:0009428"}


id: PBO:0061206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide binding oligomerization domain containing 1","termid":"PBO:0061206"}


id: SO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACTGTG), part of a 5' D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_heptamer","synonyms":[{"name":"5'D-HEPTAMER","type":"exact"},{"name":"five prime D heptamer","type":"exact"}],"termid":"SO:0000496"}


id: PR:Q09802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cum1 gene.","definition_xrefs":["UniProtKB:Q09802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C22G7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.11c","synonyms":[{"name":"Spom972h-cum1","type":"exact"}],"termid":"PR:Q09802"}


id: PBO:0026962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_cellular_response_to_phosphate_starvation","termid":"PBO:0026962"}


id: GO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + L-cysteine = nicotinamide + N2-(ADP-D-ribosyl)-L-cysteine.","definition_xrefs":["EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD(P)-cysteine ADP-ribosyltransferase activity","termid":"GO:0018071"}


id: GO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of cell outer membrane (obsolete GO:0031230)","synonyms":[{"name":"intrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031230"}


id: GO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (pseudohyphal growth) (obsolete GO:0000191)","synonyms":[{"name":"activation of MAPKKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000191"}


id: FYPO:0007173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mitotic checkpoint complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:28366744","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex binding","synonyms":[{"name":"decreased MCC binding","type":"exact"},{"name":"reduced mitotic checkpoint complex binding","type":"exact"}],"termid":"FYPO:0007173"}


id: PBO:0059569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1M","termid":"PBO:0059569"}


id: GO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5 metabotropic glutamate receptor binding","synonyms":[{"name":"type 5 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031802"}


id: PBO:0041610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 39 pseudogene 1","termid":"PBO:0041610"}


id: PBO:0049180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gremlin 1, DAN family BMP antagonist","termid":"PBO:0049180"}


id: GO:2000927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellodextrin catabolic process","synonyms":[{"name":"regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000927"}


id: GO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-glucuronate, the D-enantiomer of glucuronate, from one side of a membrane to the other.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732","ISBN:0815340729","GOC:jl","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"D-glucuronate transmembrane transporter activity","termid":"GO:0042880"}


id: FYPO:0004497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is smaller than normal and contains two nuclei, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah","PMID:8292390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"multinucleate","termid":"FYPO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"small binucleate cell during stationary phase","synonyms":[{"name":"binucleate cell with decreased cell size during stationary phase","type":"exact"},{"name":"binucleate cell with reduced cell size during stationary phase","type":"exact"}],"termid":"FYPO:0004497"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75921],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: GO:0044598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving doxorubicin, an anthracycline antibiotic, used in cancer chemotherapy.","definition_xrefs":["PMID:10200167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"doxorubicin metabolic process","termid":"GO:0044598"}


id: PBO:0004944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc40","termid":"PBO:0004944"}


id: GO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"negatively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cortisol secretion","synonyms":[{"name":"down regulation of cortisol secretion","type":"exact"},{"name":"down-regulation of cortisol secretion","type":"exact"},{"name":"downregulation of cortisol secretion","type":"exact"},{"name":"inhibition of cortisol secretion","type":"narrow"}],"termid":"GO:0051463"}


id: GO:2001248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ammonia assimilation cycle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"regulates","term_name":"ammonia assimilation cycle","termid":"GO:0019676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of ammonia assimilation cycle","synonyms":[{"name":"regulation of glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"regulation of glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:2001248"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: PBO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_nucleation_during_mitosis","termid":"PBO:0035962"}


id: PBO:0028629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028629"}


id: PBO:0052298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDRBS2 3'UTR overlapping transcript 1","termid":"PBO:0052298"}


id: GO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an aleurone grain.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"aleurone grain","termid":"GO:0033095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"aleurone grain membrane","termid":"GO:0032578"}


id: GO:0030156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peripheral benzodiazepine receptor (PBR).","definition_xrefs":["PMID:9915832","GOC:ceb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"benzodiazepine receptor binding","synonyms":[{"name":"benzodiazepine receptor ligand","type":"narrow"},{"name":"diazepam binding inhibitor activity","type":"related"}],"termid":"GO:0030156"}


id: PBO:0003438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf15","termid":"PBO:0003438"}


id: GO:0000018
data:
  {"annotated_genes":["SJAG_03438","SJAG_03219","SJAG_04205","SJAG_00266","SJAG_01677","SJAG_01205","SJAG_02592","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104480,105690],"is_not":false,"summary":null,"term":"GO:0000018"},{"annotations":[103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[103388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[84810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[104711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"},{"annotations":[84916,90000,111551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010520"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination, a DNA metabolic process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01205":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03438":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000018","terms_by_termid":{"GO:0000018":null,"GO:0010520":null,"GO:0010569":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null}}


id: PBO:0072453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 17","termid":"PBO:0072453"}


id: GO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the production of molecular mediator of immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"negatively_regulates","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of production of molecular mediator of immune response","synonyms":[{"name":"down regulation of production of molecular mediator of immune response","type":"exact"},{"name":"down-regulation of production of molecular mediator of immune response","type":"exact"},{"name":"downregulation of production of molecular mediator of immune response","type":"exact"},{"name":"inhibition of production of molecular mediator of immune response","type":"narrow"}],"termid":"GO:0002701"}


id: PBO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing_during_vegetative_growth","termid":"PBO:0036125"}


id: PBO:0048944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 2","termid":"PBO:0048944"}


id: SO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified tryptophan amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_tryptophan","secondary_identifiers":["MOD:00918"],"synonyms":[{"name":"ModTrp","type":"exact"},{"name":"modified L tryptophan","type":"exact"},{"name":"modified L-tryptophan","type":"exact"}],"termid":"SO:0001393"}


id: PBO:0075623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF pathway regulator in golgi 1","termid":"PBO:0075623"}


id: GO:0140487
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89412,89413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a metal ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:12050156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"metal ion sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140487","terms_by_termid":{"GO:0140486":null}}


id: PBO:0016927
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NSR1","termid":"PBO:0016927"}


id: PBO:0089830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat/BOP1NT protein Erb1","termid":"PBO:0089830"}


id: PBO:0082285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aquaglyceroporin, plasma membrane channel; involved in efflux of glycerol and xylitol, and in transport of acetate, arsenite, and antimonite; key factor in maintaining redox balance by mediating passive diffusion of glycerol; phosphorylated by Hog1p and Slt2p MAPK; deletion improves xylose fermentation; regulated by Rgc1p and Ask10p, which are regulated by Hog1p phosphorylation under osmotic stress; phosphorylation by Ypk1p required to maintain an open state","termid":"PBO:0082285"}


id: PBO:0081402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 250","termid":"PBO:0081402"}


id: PBO:0063766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate regulating endopeptidase X-linked","termid":"PBO:0063766"}


id: PBO:0061752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2","termid":"PBO:0061752"}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: GO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoarabinomannan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipoarabinomannan immune receptor activity","synonyms":[{"name":"LAM receptor activity","type":"exact"},{"name":"lipoarabinomannan receptor activity","type":"broad"}],"termid":"GO:0001877"}


id: PBO:0087518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of hexameric RecA-like ATPase Elp456 Elongator subcomplex; which is required for modification of wobble nucleosides in tRNA; iki1 mutations confer resistance to the K. lactis toxin zymocin","termid":"PBO:0087518"}


id: GO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"negative regulation of bile acid metabolic process","termid":"GO:1904252"},{"relation_name":"negatively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of bile acid biosynthetic process","synonyms":[{"name":"down regulation of bile acid biosynthetic process","type":"exact"},{"name":"down-regulation of bile acid biosynthetic process","type":"exact"},{"name":"downregulation of bile acid biosynthetic process","type":"exact"},{"name":"inhibition of bile acid biosynthetic process","type":"narrow"},{"name":"negative regulation of bile acid anabolism","type":"exact"},{"name":"negative regulation of bile acid biosynthesis","type":"exact"},{"name":"negative regulation of bile acid formation","type":"exact"},{"name":"negative regulation of bile acid synthesis","type":"exact"}],"termid":"GO:0070858"}


id: PBO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2 pseudogene 1","termid":"PBO:0045672"}


id: PBO:0081766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 697","termid":"PBO:0081766"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: PBO:0085959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression affects endocytic protein trafficking; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0085959"}


id: PBO:0064532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit K","termid":"PBO:0064532"}


id: PBO:0051161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-42 (pseudogene)","termid":"PBO:0051161"}


id: GO:0043260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-11 complex","synonyms":[{"name":"laminin-521 complex","type":"exact"}],"termid":"GO:0043260"}


id: PBO:0055969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 1 pseudogene 1","termid":"PBO:0055969"}


id: PBO:0047689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT1 pseudogene 1","termid":"PBO:0047689"}


id: GO:0102864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:3-2-18:2-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-18:3-2-18:2-phosphatidylcholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8331"],"termid":"GO:0102864"}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: GO:0034827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + O2 = 4-(2-oxocyclohexyl)-2-hydroxy-buta-2,4-dienoate + H+.","definition_xrefs":["UM-BBD_reactionID:r1171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene extradiol dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034827"}


id: PBO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 2 (I blood group)","termid":"PBO:0048479"}


id: MOD:00547
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:14997490","Unimod:194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","synonyms":[{"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","type":"related"},{"name":"AccQTag","type":"related"}],"termid":"MOD:00547"}


id: PBO:0063604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 19","termid":"PBO:0063604"}


id: PBO:0062651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 1 pseudogene","termid":"PBO:0062651"}


id: PBO:0004371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex large subunit Nuc1","termid":"PBO:0004371"}


id: MOD:01487
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532#K","OMSSA:168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ114K","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01487"}


id: PR:Q9P380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide transporter ptr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.04c","synonyms":[{"name":"Spom972h-ptr2","type":"exact"},{"name":"peptide permease ptr2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P380"}


id: PBO:0075497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 42","termid":"PBO:0075497"}


id: PR:Q9Y7P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug72 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 72 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.02","synonyms":[{"name":"Spom972h-mug72","type":"exact"}],"termid":"PR:Q9Y7P6"}


id: PBO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26 (predicted)","termid":"PBO:0003805"}


id: PBO:0042829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 2","termid":"PBO:0042829"}


id: GO:0050730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}


id: GO:0038047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with morphine (17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"morphine receptor activity","synonyms":[{"name":"mu-opioid receptor activity","type":"related"}],"termid":"GO:0038047"}


id: PBO:0091661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Cha4","termid":"PBO:0091661"}


id: CHEBI:29108
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A calcium cation that has formula Ca.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium(2+)","termid":"CHEBI:29108"}


id: GO:2001145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"},{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001145"}


id: PBO:0073564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src homology 2 domain containing transforming protein D","termid":"PBO:0073564"}


id: PBO:0068950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 194, pseudogene","termid":"PBO:0068950"}


id: PBO:0080257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 20 pseudogene","termid":"PBO:0080257"}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: GO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process of the immune system that executes a component of an immune response. An effector immune process takes place after its activation.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune effector process","termid":"GO:0002252"}


id: GO:0021979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of cells that will contribute to the structure and function of the hypothalamus.","definition_xrefs":["GOC:jid","GOC:mgi_curators","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hypothalamus development","termid":"GO:0021854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus cell differentiation","termid":"GO:0021979"}


id: PBO:0044358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 45","termid":"PBO:0044358"}


id: GO:0050406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [acetyl-CoA carboxylase]-phosphate + H2O = [acetyl-CoA carboxylase] + phosphate.","definition_xrefs":["EC:3.1.3.44","MetaCyc:ACETYL-COA-CARBOXYLASE-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0004721","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"[acetyl-CoA carboxylase]-phosphatase activity","secondary_identifiers":["RHEA:17125"],"synonyms":[{"name":"acetyl-CoA carboxylase-phosphatase activity","type":"related"},{"name":"acetyl-CoA:carbon-dioxide ligase (ADP-forming)-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050406"}


id: PBO:0071904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 42","termid":"PBO:0071904"}


id: PATO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000756 transfer arousal value (obsolete PATO:0000756)","termid":"PATO:0000756"}


id: MOD:01373
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S,4R)-5-hydroxyleucine.","definition_xrefs":["PubMed:16858410","RESID:AA0443","PubMed:7690768","PubMed:9164839","ChEBI:141824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated leucine","termid":"MOD:01411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-5-hydroxyleucine","synonyms":[{"name":"(2S,4R)-2-amino-5-hydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S,4R)-5-hydroxyleucine","type":"exact"},{"name":"(4R)-5-hydroxyleucine","type":"exact"},{"name":"MOD_RES (4R)-5-hydroxyleucine","type":"exact"},{"name":"delta-hydroxyleucine","type":"exact"}],"termid":"MOD:01373"}


id: PBO:0077561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 268","termid":"PBO:0077561"}


id: PBO:0012525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_division_of","termid":"PBO:0012525"}


id: GO:0021617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the glossopharyngeal nerve. This process pertains to the physical shaping of a rudimentary structure. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve morphogenesis","termid":"GO:0021615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve structural organization","synonyms":[{"name":"CN IX structural organization","type":"related"},{"name":"glossopharyngeal nerve structural organisation","type":"exact"}],"termid":"GO:0021617"}


id: GO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The wall surrounding a mature pollen grain; a multilayered structure consisting of a pectocellulosic intine surrounded by a sporopollenin-based exine, which itself contains two layers, the inner nexine and the outer sexine.","definition_xrefs":["PMID:15131249","GOC:fz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen wall","synonyms":[{"name":"microspore wall","type":"exact"}],"termid":"GO:0043667"}


id: PBO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear","termid":"PBO:0070262"}


id: SO:0001014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic region that has an attribute.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_domain","synonyms":[{"name":"intron domain","type":"exact"}],"termid":"SO:0001014"}


id: GO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accomplishment of a non-fluctuating membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stabilization of membrane potential","termid":"GO:0030322"}


id: PBO:0055795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 4","termid":"PBO:0055795"}


id: GO:0010704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang resulting in the transfer of genetic information from one helix to another.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break processing","termid":"GO:0000706"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing involved in meiotic gene conversion","termid":"GO:0010704"}


id: PBO:0034702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Gup1 (predicted)","termid":"PBO:0034702"}


id: PBO:0082081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway","termid":"PBO:0082081"}


id: PBO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 21","termid":"PBO:0071180"}


id: PBO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034445"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["RESID:AA0206","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: PBO:0070880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 12","termid":"PBO:0070880"}


id: PBO:0087533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nup84p subcomplex of nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis; is involved in establishment of a normal nucleocytoplasmic concentration gradient of GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at nuclear periphery, including double-strand break repair, transcription and chromatin silencing; relocalizes to cytosol in response to hypoxia; homolog of human NUP133","termid":"PBO:0087533"}


id: GO:1902726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of satellite cell differentiation.","definition_xrefs":["PMID:23212449","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle cell differentiation","termid":"GO:2001016"},{"relation_name":"positively_regulates","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle satellite cell differentiation","synonyms":[{"name":"activation of satellite cell differentiation","type":"narrow"},{"name":"up regulation of satellite cell differentiation","type":"exact"},{"name":"up-regulation of satellite cell differentiation","type":"exact"},{"name":"upregulation of satellite cell differentiation","type":"exact"}],"termid":"GO:1902726"}


id: GO:1904181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization","synonyms":[{"name":"activation of membrane depolarization","type":"narrow"},{"name":"up regulation of membrane depolarization","type":"exact"},{"name":"up-regulation of membrane depolarization","type":"exact"},{"name":"upregulation of membrane depolarization","type":"exact"}],"termid":"GO:1904181"}


id: GO:1990557
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84188],"is_not":false,"summary":null,"term":"GO:1990557"}]},"cv_name":"biological_process","definition":"The process in which sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transport","termid":"GO:1902358"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrial sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990557","terms_by_termid":{"GO:1990557":null}}


id: PBO:0090152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul4-RING E3 complex WD repeat protein subunit Ddb1","termid":"PBO:0090152"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: PR:O13756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.06c","secondary_identifiers":["UniProtKB:O13756"],"synonyms":[{"name":"Spom972h-VPS8","type":"exact"},{"name":"vacuolar protein-targeting protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13756"}


id: GO:0009457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A group of small electron carriers, characteristic of anaerobic bacteria, photosynthetic bacteria, cyanobacteria and eukaryotic algae. Contain flavin mononucleotide.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete flavodoxin (obsolete GO:0009457)","synonyms":[{"name":"flavodoxin","type":"exact"}],"termid":"GO:0009457"}


id: PBO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-local_domain","termid":"PBO:0012822"}


id: PBO:0030932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate-ammonia_ligase_activity","termid":"PBO:0030932"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: GO:0070684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive process in which coagulated semen becomes liquid following ejaculation, allowing the progressive release of motile spermatozoa.","definition_xrefs":["PMID:18482984","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal clot liquefaction","synonyms":[{"name":"semen liquefaction","type":"exact"}],"termid":"GO:0070684"}


id: GO:0010754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cGMP-mediated signaling","synonyms":[{"name":"negative regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010754"}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["PMID:25089138","GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: GO:1990882
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"The modification of rRNA structure by addition of an acetyl group to rRNA. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA acetylation","termid":"GO:1990884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"rRNA acetylation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990882","terms_by_termid":{"GO:1904812":null}}


id: GO:0045087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GO_REF:0000022","GOC:add","GOC:mtg_sensu","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immune response","secondary_identifiers":["GO:0002226","Wikipedia:Innate_immune_system"],"synonyms":[{"name":"innate immunity","type":"exact"},{"name":"nonspecific immune response","type":"exact"}],"termid":"GO:0045087"}


id: PBO:0043106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8","termid":"PBO:0043106"}


id: GO:0006956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway.","definition_xrefs":["ISBN:0781735149","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation","synonyms":[{"name":"complement activity","type":"related"},{"name":"complement cascade","type":"exact"},{"name":"complement response","type":"exact"}],"termid":"GO:0006956"}


id: GO:0045666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"positively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron differentiation","synonyms":[{"name":"activation of neuron differentiation","type":"narrow"},{"name":"stimulation of neuron differentiation","type":"narrow"},{"name":"up regulation of neuron differentiation","type":"exact"},{"name":"up-regulation of neuron differentiation","type":"exact"},{"name":"upregulation of neuron differentiation","type":"exact"}],"termid":"GO:0045666"}


id: PATO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality inhering in a bearer by virtue of the bearer's vertical dimension of extension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"height","termid":"PATO:0000119"}


id: PBO:0084606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YPL052W-A has been demonstrated to be the first exon of downstream ORF OAZ1/YPL052W.","termid":"PBO:0084606"}


id: PBO:0003031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of RNA-mediated gene silencing","termid":"PBO:0003031"}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["UniProtKB:P40847","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: PBO:0066992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 295","termid":"PBO:0066992"}


id: PBO:0075657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, non-erythrocytic 1","termid":"PBO:0075657"}


id: GO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.","definition_xrefs":["PMID:14871316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-alkylthiohydroximate lyase activity","synonyms":[{"name":"S-alkylthiohydroximate C-S lyase activity","type":"narrow"}],"termid":"GO:0080108"}


id: GO:0034939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxypyrrole-2-carboxylate = 5-oxo-4,5-dihydropyrrole-2-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-hydroxypyrrole-2-carboxylate tautomerase activity","termid":"GO:0034939"}


id: PBO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within","termid":"PBO:0035697"}


id: SO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide binding motif is a short (up to 20 amino acids) polypeptide region of biological interest that contains one or more amino acids experimentally shown to bind to a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_binding_motif","synonyms":[{"name":"binding","type":"related"},{"name":"polypeptide binding motif","type":"exact"}],"termid":"SO:0100018"}


id: FYPO:0003289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to medial cortical node","synonyms":[{"name":"abnormal protein localisation to medial cortical node","type":"exact"},{"name":"abnormal protein localization to cortical medial dot","type":"exact"},{"name":"abnormal protein localization to cytokinetic nodes","type":"related"},{"name":"abnormal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortical nodes","type":"exact"},{"name":"abnormal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0003289"}


id: PATO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involute","termid":"PATO:0001962"}


id: PBO:0065334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 58","termid":"PBO:0065334"}


id: FYPO:0002742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of iron transport gene mRNA during vegetative growth","synonyms":[{"name":"increased iron transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002742"}


id: GO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, direction or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of extent of cell growth","termid":"GO:0061387"},{"relation_name":"regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension","termid":"GO:0030516"}


id: PBO:0066638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal modification protein rimK like family member A","termid":"PBO:0066638"}


id: FYPO:0000274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"delayed onset of cytokinesis","termid":"FYPO:0000420"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic M phase","secondary_identifiers":["FYPO:0000609","FYPO:0004234"],"synonyms":[{"name":"delayed mitotic M phase progression","type":"related"},{"name":"delayed mitotic M phase progression during vegetative growth","type":"exact"},{"name":"increased duration of M phase during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitosis","type":"related"},{"name":"increased duration of mitosis during mitotic cell cycle","type":"related"},{"name":"increased duration of mitosis during vegetative growth","type":"related"},{"name":"increased duration of mitotic nuclear division","type":"related"},{"name":"increased mitotic M phase duration","type":"exact"},{"name":"increased mitotic M phase duration during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in M phase: delayed","type":"related"},{"name":"prolonged mitosis","type":"related"},{"name":"prolonged mitotic M phase","type":"exact"},{"name":"spindle checkpoint activated","type":"related"}],"termid":"FYPO:0000274"}


id: PBO:0082301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asn and gln rich protein of unknown function; high-copy suppressor of POL1 (DNA polymerase alpha) and partial suppressor of CDC2 (polymerase delta) and CDC6 (pre-RC loading factor) mutations; overexpression results in growth inhibition; capable of forming the prion [PSP1+]; PSP1 has a paralog, YLR177W, that arose from the whole genome duplication","termid":"PBO:0082301"}


id: PBO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.8","termid":"PBO:0001461"}


id: GO:1900703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of orcinol biosynthetic process","termid":"GO:1900701"},{"relation_name":"positively_regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of orcinol biosynthetic process","synonyms":[{"name":"activation of orcinol anabolism","type":"exact"},{"name":"activation of orcinol biosynthesis","type":"exact"},{"name":"activation of orcinol biosynthetic process","type":"narrow"},{"name":"activation of orcinol formation","type":"exact"},{"name":"activation of orcinol synthesis","type":"exact"},{"name":"positive regulation of orcinol anabolism","type":"exact"},{"name":"positive regulation of orcinol biosynthesis","type":"exact"},{"name":"positive regulation of orcinol formation","type":"exact"},{"name":"positive regulation of orcinol synthesis","type":"exact"},{"name":"up regulation of orcinol anabolism","type":"exact"},{"name":"up regulation of orcinol biosynthesis","type":"exact"},{"name":"up regulation of orcinol biosynthetic process","type":"exact"},{"name":"up regulation of orcinol formation","type":"exact"},{"name":"up regulation of orcinol synthesis","type":"exact"},{"name":"up-regulation of orcinol anabolism","type":"exact"},{"name":"up-regulation of orcinol biosynthesis","type":"exact"},{"name":"up-regulation of orcinol biosynthetic process","type":"exact"},{"name":"up-regulation of orcinol formation","type":"exact"},{"name":"up-regulation of orcinol synthesis","type":"exact"},{"name":"upregulation of orcinol anabolism","type":"exact"},{"name":"upregulation of orcinol biosynthesis","type":"exact"},{"name":"upregulation of orcinol biosynthetic process","type":"exact"},{"name":"upregulation of orcinol formation","type":"exact"},{"name":"upregulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900703"}


id: PBO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 86","termid":"PBO:0042029"}


id: PBO:0036233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in DNA repair Rad8","termid":"PBO:0036233"}


id: PBO:0064112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 2 (gene/pseudogene)","termid":"PBO:0064112"}


id: GO:2000154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of flagellar cell motility.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of flagellar cell motility (obsolete GO:2000154)","synonyms":[{"name":"negative regulation of flagellar cell motility","type":"exact"}],"termid":"GO:2000154"}


id: GO:0010737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of protein kinase A (PKA), and ends with the regulation of a downstream cellular process, e.g. transcription. The PKA catalytic subunit (PKA-C) is normally present in a complex with its regulatory subunit, PKA-R. The inhibitory action of PKA-R is released upon cAMP binding, which results in the activation of PKA-C.","definition_xrefs":["PMID:35252178","PMID:36431013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase A signaling","synonyms":[{"name":"PKA signaling cascade","type":"related"},{"name":"protein kinase A signal transduction","type":"exact"},{"name":"protein kinase A signaling cascade","type":"related"},{"name":"protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010737"}


id: PBO:0056886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 1","termid":"PBO:0056886"}


id: PBO:0004305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family 6","termid":"PBO:0004305"}


id: PBO:0064723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 59","termid":"PBO:0064723"}


id: PBO:0068423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginyl aminopeptidase like 1","termid":"PBO:0068423"}


id: PBO:0090982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit Sds22","termid":"PBO:0090982"}


id: GO:0060276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction in response to a build-up of toxins in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of stationary phase","termid":"GO:0060274"},{"relation_name":"part_of","term_name":"response to toxic substance","termid":"GO:0009636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase in response to toxin","termid":"GO:0060276"}


id: GO:1901163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophoblast cell migration","termid":"GO:1901163"}


id: PBO:0040500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A pseudogene 2","termid":"PBO:0040500"}


id: GO:0032911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta1 production","termid":"GO:0032908"},{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta production","termid":"GO:0071635"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta1 production","synonyms":[{"name":"down regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"down-regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"downregulation of transforming growth factor-beta1 production","type":"exact"},{"name":"inhibition of transforming growth factor-beta1 production","type":"narrow"},{"name":"negative regulation of TGF-B1 production","type":"exact"},{"name":"negative regulation of TGFB1 production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032911"}


id: PBO:0067668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 847, pseudogene","termid":"PBO:0067668"}


id: MOD:00065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-acetyl-L-cysteine.","definition_xrefs":["PubMed:12175151","PubMed:1310545","PubMed:11999733","PubMed:11857757","PubMed:14730666","PubMed:15350136","RESID:AA0056","Unimod:1#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetylated residue","termid":"MOD:00645"},{"relation_name":"is_a","term_name":"acetylated L-cysteine","termid":"MOD:00646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-acetyl-L-cysteine","synonyms":[{"name":"(2R)-3-acetylsulfanyl-2-aminopropanoic acid","type":"exact"},{"name":"2-amino-3-(acetylthio)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(acetylsulfanyl)propanoic acid","type":"exact"},{"name":"ACT_SITE S-acetylcysteine intermediate","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"S-acetyl-L-cysteine","type":"exact"},{"name":"S-acetylcysteine","type":"exact"},{"name":"SAcCys","type":"exact"},{"name":"cysteine acetate thioester","type":"exact"}],"termid":"MOD:00065"}


id: SO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where there may have been an error in the assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_assembly_error","synonyms":[{"name":"possible assembly error","type":"exact"}],"termid":"SO:0000702"}


id: PBO:0089386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane anchored oxidoreductase Aif1","termid":"PBO:0089386"}


id: PBO:0074788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 9","termid":"PBO:0074788"}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: PBO:0030353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_salt_stress","termid":"PBO:0030353"}


id: PBO:0042988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 1","termid":"PBO:0042988"}


id: GO:0102450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferide + S-adenosyl-L-methionine = 7,4'-dimethylkaempferol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kaempferide 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13936"],"termid":"GO:0102450"}


id: PBO:0082658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; this complex has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs through deadenylation; basal transcription factor","termid":"PBO:0082658"}


id: GO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a caspase family protein.","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease binding","termid":"GO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"caspase binding","termid":"GO:0089720"}


id: PBO:0036071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036071"}


id: FYPO:0002242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated tapered vegetative cell","synonyms":[{"name":"inviable elongated bottle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated bottle/skittle vegetative cell","type":"exact"},{"name":"inviable elongated skittle-shaped vegetative cell","type":"exact"},{"name":"inviable elongated tapered cell during vegetative growth","type":"exact"},{"name":"inviable long tapered vegetative cell","type":"exact"},{"name":"lethal; elongated tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002242"}


id: FYPO:0002467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore has an abnormal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore morphology","termid":"FYPO:0000348"},{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spore shape","termid":"FYPO:0002467"}


id: PBO:0064400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARN like ribonuclease domain containing exonuclease 1","termid":"PBO:0064400"}


id: GO:2001218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of S/G2 transition of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of S/G2 transition of mitotic cell cycle (obsolete GO:2001218)","synonyms":[{"name":"negative regulation of S/G2 transition of mitotic cell cycle","type":"exact"}],"termid":"GO:2001218"}


id: GO:0031031
data:
  {"annotated_genes":["SJAG_04776","SJAG_00082","SJAG_01805","SJAG_03936","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83327,85724,89446,97882,105887],"is_not":false,"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of septation initiation signaling","termid":"GO:0031029"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of septation initiation signaling","type":"narrow"},{"name":"positive regulation of septation initiation network","type":"exact"},{"name":"positive regulation of septation initiation signaling cascade","type":"related"},{"name":"positive regulation of septation initiation signalling","type":"exact"},{"name":"stimulation of septation initiation signaling","type":"narrow"},{"name":"up regulation of septation initiation signaling","type":"exact"},{"name":"up-regulation of septation initiation signaling","type":"exact"},{"name":"upregulation of septation initiation signaling","type":"exact"}],"termid":"GO:0031031","terms_by_termid":{"GO:0031031":null}}


id: PBO:0081803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 732","termid":"PBO:0081803"}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11549:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: GO:0002135
data:
  {"annotated_genes":["SJAG_02288","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83531,86549],"is_not":false,"summary":null,"term":"GO:0002135"}]},"cv_name":"molecular_function","definition":"Binding to CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0124020607","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002135","terms_by_termid":{"GO:0002135":null}}


id: PBO:0042389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member b","termid":"PBO:0042389"}


id: FYPO:0008051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is decreased.","definition_xrefs":["PMID:28572513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased ubiquitin ligase activity","termid":"FYPO:0008051"}


id: PBO:0017667
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"new inducer of mitosis","termid":"PBO:0017667"}


id: GO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + A = 2-dehydropantolactone + AH(2).","definition_xrefs":["RHEA:21004","EC:1.1.99.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-pantolactone dehydrogenase (flavin) activity","secondary_identifiers":["MetaCyc:1.1.99.27-RXN","KEGG_REACTION:R03156"],"synonyms":[{"name":"(R)-pantolactone:acceptor oxidoreductase (flavin-containing)","type":"related"},{"name":"(R)-pantoyllactone dehydrogenase (flavin) activity","type":"related"},{"name":"2-dehydropantolactone reductase (flavin) activity","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (flavin) activity","type":"related"}],"termid":"GO:0047060"}


id: PBO:0057757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1915 host gene","termid":"PBO:0057757"}


id: PBO:0027870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_and_delayed_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0027870"}


id: FYPO:0007523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to oxidative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:19625445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to oxidative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to oxidative stress","type":"exact"},{"name":"decreased protein level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007523"}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: PBO:0027430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_damage_at_stalled_replication_fork","termid":"PBO:0027430"}


id: SO:0002239
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 28S_rRNA, which functions as a component of the large subunit of the ribosome in eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_28S_gene","synonyms":[{"name":"28S rRNA gene","type":"exact"},{"name":"28S_rRNA_gene","type":"exact"}],"termid":"SO:0002239"}


id: PBO:0108939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 18","termid":"PBO:0108939"}


id: FYPO:0006323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after stalled replication forks accumulate.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following replication fork stalling","synonyms":[{"name":"decreased viability following replication fork stalling","type":"exact"},{"name":"loss of cell population viability following replication fork stalling","type":"exact"},{"name":"reduced viability following replication fork stalling","type":"related"}],"termid":"FYPO:0006323"}


id: FYPO:0007336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished chromatin silencing at silent mating-type cassette","synonyms":[{"name":"abolished chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"abolished chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"chromatin silencing at silent mating-type cassette abolished","type":"exact"}],"termid":"FYPO:0007336"}


id: GO:0071341
data:
  {"annotated_genes":["SJAG_01665","SJAG_02368","SJAG_02169","SJAG_04498","SJAG_00228","SJAG_03596","SJAG_05290","SJAG_04280","SJAG_01889","SJAG_03602","SJAG_04486","SJAG_00773","SJAG_00807","SJAG_03564","SJAG_01456","SJAG_01143","SJAG_03703","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84048,84705,86422,87973,88225,89497,91901,93599,96214,96779,100618,101637,112270,113085],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[111266,93992,98963,94549],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A component of the cell division site that contains the mid1, cdr2, wee1, klp8, and blt1 proteins, and is involved in contractile ring localization. Medial cortical node complexes appear as cortical dots in the middle of the cell during interphase, and function to recruit other ring components in early mitosis.","definition_xrefs":["PMID:19959363","GOC:mah","PMID:19474789","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00279":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_01143":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01889":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03703":null,"SJAG_04280":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mid1p medial cortical dot","type":"exact"},{"name":"midsome","type":"exact"}],"termid":"GO:0071341","terms_by_termid":{"GO:0071341":null,"GO:0110115":null}}


id: GO:0050546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)pyruvate + H+ = (4-hydroxyphenyl)acetaldehyde + CO2.","definition_xrefs":["EC:4.1.1.80","RHEA:18697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"4-hydroxyphenylpyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03341","MetaCyc:4.1.1.80-RXN"],"synonyms":[{"name":"4-hydroxyphenylpyruvate carboxy-lyase (4-hydroxyphenylacetaldehyde-forming)","type":"related"},{"name":"4-hydroxyphenylpyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0050546"}


id: PBO:0048524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein overexpressed in skeletal muscle","termid":"PBO:0048524"}


id: PBO:0058147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4443","termid":"PBO:0058147"}


id: PBO:0057428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-1","termid":"PBO:0057428"}


id: PBO:0073175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein F","termid":"PBO:0073175"}


id: PBO:0071047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 49","termid":"PBO:0071047"}


id: PBO:0043755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 3","termid":"PBO:0043755"}


id: _global:removed_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is removed.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"removed_during","termid":"_global:removed_during"}


id: GO:1904174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["PMID:24843136","GO_REF:0000059","GOC:TermGenie","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904174)","synonyms":[{"name":"down regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"down-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"downregulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"inhibition of histone demethylase activity (H3-K4 specific)","type":"narrow"}],"termid":"GO:1904174"}


id: PR:O74446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.01","synonyms":[{"name":"Spom972h-sif2","type":"exact"},{"name":"sporulation protein sif2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74446"}


id: PBO:0082946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic isoleucine-tRNA synthetase; target of the G1-specific inhibitor reveromycin A","termid":"PBO:0082946"}


id: PBO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2","termid":"PBO:0051861"}


id: PBO:0065420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 7","termid":"PBO:0065420"}


id: PBO:0059592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 4","termid":"PBO:0059592"}


id: GO:0003696
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035939"}]},"cv_name":"molecular_function","definition":"Binding to satellite DNA, the many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","definition_xrefs":["GOC:jl","SO:0000005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"satellite DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0003696","terms_by_termid":{"GO:0035939":null}}


id: GO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinamide mononucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:16149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01271","MetaCyc:2.4.2.12-RXN","Reactome:R-HSA-197250","EC:2.4.2.12"],"synonyms":[{"name":"NMN diphosphorylase activity","type":"related"},{"name":"NMN pyrophosphorylase activity","type":"related"},{"name":"NMN synthetase activity","type":"related"},{"name":"nicotinamide mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide mononucleotide synthetase activity","type":"related"},{"name":"nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047280"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: GO:0099023
data:
  {"annotated_genes":["SJAG_03158","SJAG_04021","SJAG_03005","SJAG_02166","SJAG_00204","SJAG_04966","SJAG_04960","SJAG_03054","SJAG_04618","SJAG_01925","SJAG_02211","SJAG_00380","SJAG_05184","SJAG_04837","SJAG_03467","SJAG_00578","SJAG_04358","SJAG_01071","SJAG_03963","SJAG_02750","SJAG_00820","SJAG_02655","SJAG_00850","SJAG_03357","SJAG_03938","SJAG_01415","SJAG_03864","SJAG_02811","SJAG_04902","SJAG_01645","SJAG_01459","SJAG_02753","SJAG_01166","SJAG_01598","SJAG_02320","SJAG_00041","SJAG_04044","SJAG_03663","SJAG_02525","SJAG_05194","SJAG_02315"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85894,95827,100103,112136,95769,113615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033263"},{"annotations":[106990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[112943,75207,86449,95077,97419,114003,76496,70887,109459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000145"},{"annotations":[70014,78296,77489,92730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000938"},{"annotations":[70438,112081,74803,76327,84714,101585,104882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017119"},{"annotations":[92886,74364,85086,84426,98017,94658,105202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[71449,74365,95284,85087,94659,98018,92887,98854,84427,105203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[94660,98019,84428,92888,74366,76651,105204,73030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"},{"annotations":[100105,95831,76106,113618,89937,95772,71295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"Any protein complex that plays a role in vesicle tethering.","definition_xrefs":["GOC:dos","GOC:vw","PMID:27243008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00578":null,"SJAG_00820":null,"SJAG_00850":null,"SJAG_01071":null,"SJAG_01166":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02211":null,"SJAG_02315":null,"SJAG_02320":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_03005":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03357":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_04021":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null,"SJAG_04902":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"vesicle tethering complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099023","terms_by_termid":{"GO:0000145":null,"GO:0000938":null,"GO:0017119":null,"GO:0033263":null,"GO:0070939":null,"GO:1902500":null,"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: GO:1904449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2342602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"negatively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartate secretion","synonyms":[{"name":"down regulation of aspartate secretion","type":"exact"},{"name":"down-regulation of aspartate secretion","type":"exact"},{"name":"downregulation of aspartate secretion","type":"exact"},{"name":"inhibition of aspartate secretion","type":"narrow"}],"termid":"GO:1904449"}


id: GO:0009227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule catabolic process","termid":"GO:0034656"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleotide-sugar catabolic process","synonyms":[{"name":"nucleotide-sugar breakdown","type":"exact"},{"name":"nucleotide-sugar catabolism","type":"exact"},{"name":"nucleotide-sugar degradation","type":"exact"}],"termid":"GO:0009227"}


id: PBO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level","termid":"PBO:0030251"}


id: GO:0071954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 11 (CCL11, also known as eotaxin-1) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:9600955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 11 production","synonyms":[{"name":"eotaxin production","type":"broad"},{"name":"eotaxin-1 production","type":"exact"},{"name":"CCL-11 production","type":"exact"},{"name":"CCL11 production","type":"exact"},{"name":"C-C motif chemokine 11 production","type":"exact"}],"termid":"GO:0071954"}


id: GO:0018796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxyphthalate = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4,5-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["RHEA:24184","MetaCyc:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN","UM-BBD_enzymeID:e0106"],"synonyms":[{"name":"4,5-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"4,5-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0018796"}


id: PBO:0088495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (DDK family) Spo4","termid":"PBO:0088495"}


id: PBO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1","termid":"PBO:0061607"}


id: PBO:0026696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026696"}


id: PBO:0070959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 14","termid":"PBO:0070959"}


id: PBO:0004158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smf1","termid":"PBO:0004158"}


id: GO:1902943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:22006324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of anion channel activity","termid":"GO:1901529"},{"relation_name":"is_a","term_name":"regulation of voltage-gated chloride channel activity","termid":"GO:1902941"},{"relation_name":"is_a","term_name":"positive regulation of inorganic anion transmembrane transport","termid":"GO:1903797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated chloride channel activity","synonyms":[{"name":"activation of voltage gated chloride channel activity","type":"narrow"},{"name":"activation of voltage-dependent chloride channel activity","type":"narrow"},{"name":"activation of voltage-gated chloride channel activity","type":"narrow"},{"name":"positive regulation of voltage gated chloride channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"up regulation of voltage gated chloride channel activity","type":"exact"},{"name":"up regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"up regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"up-regulation of voltage gated chloride channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"up-regulation of voltage-gated chloride channel activity","type":"exact"},{"name":"upregulation of voltage gated chloride channel activity","type":"exact"},{"name":"upregulation of voltage-dependent chloride channel activity","type":"exact"},{"name":"upregulation of voltage-gated chloride channel activity","type":"exact"}],"termid":"GO:1902943"}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["UniProtKB:O94602","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: GO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031661)","synonyms":[{"name":"G2/M-specific down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific inhibition of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G2/M-specific negative regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"negative regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031661"}


id: PBO:0029552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_gamma_radiation","termid":"PBO:0029552"}


id: PBO:0074227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 1","termid":"PBO:0074227"}


id: PBO:0109656
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MDI1","termid":"PBO:0109656"}


id: PBO:0076836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 3","termid":"PBO:0076836"}


id: PBO:0054387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1783","termid":"PBO:0054387"}


id: PBO:0058780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7114","termid":"PBO:0058780"}


id: SO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on several mutually overlapping transcription units transcribed in the same direction and sharing at least one gene.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_operon","synonyms":[{"name":"complex operon","type":"exact"}],"termid":"SO:0002299"}


id: RO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has subsequence y iff all of the sequence parts of x are sequence parts of y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"},{"relation_name":"is_a","term_name":"bounds_sequence_of","termid":"RO:0002522"},{"relation_name":"is_a","term_name":"overlaps_sequence_of","termid":"RO:0002526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_subsequence","termid":"RO:0002524"}


id: GO:0106272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum-Golgi intermediate compartment (ERGIC).","definition_xrefs":["PMID:32272059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ERGIC","termid":"GO:0106272"}


id: FYPO:0005209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore","synonyms":[{"name":"abnormal protein localisation to kinetochore","type":"exact"}],"termid":"FYPO:0005209"}


id: PBO:0083235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation confers an increase in Ty1 transposition","termid":"PBO:0083235"}


id: GO:1903651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25049409"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoplasmic transport (obsolete GO:1903651)","synonyms":[{"name":"activation of cytoplasmic streaming","type":"narrow"},{"name":"activation of cytoplasmic transport","type":"narrow"},{"name":"positive regulation of cytoplasmic streaming","type":"narrow"},{"name":"up regulation of cytoplasmic streaming","type":"narrow"},{"name":"up regulation of cytoplasmic transport","type":"exact"},{"name":"up-regulation of cytoplasmic streaming","type":"narrow"},{"name":"up-regulation of cytoplasmic transport","type":"exact"},{"name":"upregulation of cytoplasmic streaming","type":"narrow"},{"name":"upregulation of cytoplasmic transport","type":"exact"}],"termid":"GO:1903651"}


id: GO:0048823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a nucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte development","termid":"GO:0048821"},{"relation_name":"part_of","term_name":"nucleate erythrocyte differentiation","termid":"GO:0043363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte development","synonyms":[{"name":"nucleate RBC development","type":"exact"},{"name":"nucleate red blood cell development","type":"exact"}],"termid":"GO:0048823"}


id: PBO:0060986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 2","termid":"PBO:0060986"}


id: GO:0030793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-demethylstaurosporine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + H+ + staurosporine.","definition_xrefs":["EC:2.1.1.139","RHEA:11696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"3'-demethylstaurosporine O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05757","MetaCyc:2.1.1.139-RXN"],"synonyms":[{"name":"3'-demethoxy-3'-hydroxystaurosporine O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3'-demethylstaurosporine O-methyltransferase activity","type":"related"},{"name":"staurosporine synthase activity","type":"related"}],"termid":"GO:0030793"}


id: GO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cup-like structure containing chains of aeciospores is formed. This is characteristic of the rust fungus and typically, the first dikaryotic spores (aeciospores) are produced in the aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aecium development","termid":"GO:0075267"}


id: PBO:0048410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin","termid":"PBO:0048410"}


id: PATO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The specific wavelength of light emitted by a fluorescent molecule, such as a labelled probe, upon absorption of light at the (higher) excitation wavelength.","definition_xrefs":["web:http://www.expertglossary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emmision wavelength","termid":"PATO:0002059"}


id: GO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont peptidase activity (obsolete GO:0052404)","synonyms":[{"name":"down regulation by host of symbiont protease activity","type":"narrow"},{"name":"down-regulation by host of symbiont protease activity","type":"narrow"},{"name":"downregulation by host of symbiont protease activity","type":"narrow"},{"name":"inhibition by host of symbiont protease activity","type":"narrow"},{"name":"inhibition of symbiont protease activity","type":"narrow"},{"name":"negative regulation by host of symbiont protease activity","type":"narrow"}],"termid":"GO:0052404"}


id: GO:0042294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both X-URM1 and Y-URM1 are covalent linkages.","definition_xrefs":["GOC:mah","PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019787","GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"URM1 transferase activity","termid":"GO:0042294"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: PBO:0074478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1 pseudogene 1","termid":"PBO:0074478"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-pinene monooxygenase [NADH] activity","secondary_identifiers":["EC:1.14.13.155","UM-BBD_reactionID:r0742"],"termid":"GO:0018634"}


id: PBO:0040385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit A","termid":"PBO:0040385"}


id: GO:0103064
data:
  {"annotated_genes":["SJAG_03953"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91336],"is_not":false,"summary":null,"term":"GO:0103064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1D-myo-inositol-1-phospho-N-[(R)-2-hydroxy-very-long-chain fatty acyl]-(R)-4-hydroxysphingoid base + GDP-alpha-D-mannose = an alpha-D-mannosyl-(1,6)-1D-myo-inositol-1-phospho-N-[(R)-2-hydroxy-very-long-chain fatty acyl]-(R)-4-hydroxysphingoid base + GDP + H+.","definition_xrefs":["GOC:pz","RHEA:64596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["https://github.com/geneontology/go-ontology/issues/21803","MetaCyc:RXN3O-663","EC:2.4.1.370"],"termid":"GO:0103064","terms_by_termid":{"GO:0103064":null}}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: PBO:0081289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72B, pseudogene","termid":"PBO:0081289"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: MOD:00535
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:178","PubMed:12216740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:00535"}


id: PBO:0074280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT1 antisense RNA 1","termid":"PBO:0074280"}


id: PBO:0086917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc-cluster transcription factor; involved in utilization of iron-transporting siderophore pulcherrimin","termid":"PBO:0086917"}


id: PR:P18253
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P18253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.03","synonyms":[{"name":"CPH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Cyclophilin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rotamase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ppi1","type":"exact"},{"name":"cyclosporin A-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P18253"}


id: PBO:0046796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor like 2","termid":"PBO:0046796"}


id: PBO:0083521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PAC2/YER007W","termid":"PBO:0083521"}


id: PBO:0078590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 3, Y-linked","termid":"PBO:0078590"}


id: PBO:0050627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 2","termid":"PBO:0050627"}


id: PR:Q9UUI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.05 gene.","definition_xrefs":["UniProtKB:Q9UUI7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.05","synonyms":[{"name":"Spom972h-SPAC22F8.05","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI7"}


id: PBO:0034440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Rad52_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034440"}


id: PBO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing","termid":"PBO:0035727"}


id: GO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:tb","PMID:12675914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating dopamine receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by dopamine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by dopamine receptor signalling pathway","type":"related"},{"name":"dopamine receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0060158"}


id: GO:0009151
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009151","terms_by_termid":{"GO:0035863":null}}


id: MOD:00232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form N6-(phospho-5'-adenosine)-L-lysine.","definition_xrefs":["RESID:AA0227","DeltaMass:316","PubMed:4944632","Unimod:405#K","PubMed:3882425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-adenosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-adenosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-adenylic-N6-L-lysine","type":"exact"},{"name":"ACT_SITE N6-AMP-lysine intermediate","type":"exact"},{"name":"AMP Lysyl","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-lysine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(zeta)-5'-adenylic-L-lysine","type":"exact"},{"name":"N6-(phospho-5'-adenosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-adenosine phosphoramidester","type":"exact"},{"name":"N6AMPLys","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"epsilon-5'-adenylic-L-lysine","type":"exact"}],"termid":"MOD:00232"}


id: GO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxypteridine + O2 = 2-amino-4,7-dihydroxypteridine + unknown.","definition_xrefs":["EC:1.17.3.1","MetaCyc:PTERIDINE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pteridine oxidase activity","secondary_identifiers":["RHEA:12777"],"synonyms":[{"name":"2-amino-4-hydroxypteridine:oxygen oxidoreductase (7-hydroxylating)","type":"related"}],"termid":"GO:0050227"}


id: PBO:0015690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein, G1-S transition regulator Hpz1","termid":"PBO:0015690"}


id: GO:0061515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a myeloid cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell development","termid":"GO:0061515"}


id: PBO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter (predicted)","termid":"PBO:0001212"}


id: GO:0046038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0044248"],"is_obsolete":false,"name":"GMP catabolic process","synonyms":[{"name":"GMP breakdown","type":"exact"},{"name":"GMP catabolism","type":"exact"},{"name":"GMP degradation","type":"exact"}],"termid":"GO:0046038"}


id: PBO:0079488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 8","termid":"PBO:0079488"}


id: PBO:0067905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 207","termid":"PBO:0067905"}


id: PATO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000751 locomotor activity value (obsolete PATO:0000751)","termid":"PATO:0000751"}


id: PBO:0049281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase","termid":"PBO:0049281"}


id: PBQ:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1. IIn some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest","synonyms":[{"name":"G0 phase","type":"related"},{"name":"cellular quiescence following G1 arrest","type":"exact"},{"name":"quiescence following G1 arrest","type":"broad"}],"termid":"PBQ:0000002"}


id: PBO:0066143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBAK downstream neighbor","termid":"PBO:0066143"}


id: PBO:0091866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA snR48","termid":"PBO:0091866"}


id: GO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.","definition_xrefs":["GOC:jl","UBERON:0002097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin development","synonyms":[{"name":"animal skin development","type":"exact"}],"termid":"GO:0043588"}


id: PBO:0044607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 1","termid":"PBO:0044607"}


id: PBO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rhp54 delta cells","termid":"PBO:0002176"}


id: PBO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic2","termid":"PBO:0015695"}


id: PBO:0052911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-3","termid":"PBO:0052911"}


id: GO:0102347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: icosanoyl-CoA(4-) + NADP(3-) = trans-2-icosenoyl-CoA(4-) + NADPH(4-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-arachidon-2-enoyl-CoA reductase activity (obsolete GO:0102347)","termid":"GO:0102347"}


id: GO:0009486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ubiquinol + O2 + 4 H+ = 2 ubiquinone + 2 H2O + 4 H+ [periplasmic space].","definition_xrefs":["RHEA:30251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0005215","GO:0003674","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"cytochrome bo3 ubiquinol oxidase activity","secondary_identifiers":["MetaCyc:RXN0-5268","EC:7.1.1.3","GO:0008827","TC:3.D.4.5.1"],"synonyms":[{"name":"cytochrome bo oxidase","type":"exact"},{"name":"cytochrome bo(3) oxidase","type":"exact"},{"name":"cytochrome o ubiquinol oxidase activity","type":"related"}],"termid":"GO:0009486"}


id: PBO:0091006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4449 family conserved fungal protein, involved in cell-cell communication in N. crassa","termid":"PBO:0091006"}


id: GO:0035930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any corticosteroid hormone into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"corticosteroid hormone secretion","synonyms":[{"name":"corticosteroid secretion","type":"broad"}],"termid":"GO:0035930"}


id: GO:1990450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a linear polymer of ubiquitin. Linear ubiquitin polymers are formed by linking the amino-terminal methionine (M1) of one ubiquitin molecule to the carboxy-terminal glycine (G76) of the next.","definition_xrefs":["GOC:bf","PMID:23453807","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin binding","termid":"GO:0043130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"linear polyubiquitin binding","synonyms":[{"name":"M1-linked ubiquitin chain binding","type":"exact"}],"termid":"GO:1990450"}


id: PBO:0053703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 905","termid":"PBO:0053703"}


id: PBO:0066329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN2 divergent transcript","termid":"PBO:0066329"}


id: GO:0015866
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74156],"is_not":false,"summary":null,"term":"GO:0015866"},{"annotations":[106249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The directed movement of ADP, adenosine diphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ADP transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015866","terms_by_termid":{"GO:0015866":null,"GO:0140021":null}}


id: PATO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001122 absolute power value (obsolete PATO:0001122)","termid":"PATO:0001122"}


id: PBO:0043361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLSTN2 antisense RNA 1","termid":"PBO:0043361"}


id: PR:O94404
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NIF3-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04957","PRO:DNx","PANTHER:PTHR13799:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NIF3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.12","secondary_identifiers":["UniProtKB:O94404"],"synonyms":[{"name":"Spom972h-NIF3L1","type":"exact"}],"termid":"PR:O94404"}


id: GO:0016847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) = 1-aminocyclopropane-1-carboxylate + S-methyl-5'-thioadenosine + H+.","definition_xrefs":["EC:4.4.1.14","RHEA:21744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase activity","secondary_identifiers":["MetaCyc:4.4.1.14-RXN","KEGG_REACTION:R00179","GO:0034100"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate synthetase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylic acid synthase activity","type":"related"},{"name":"1-aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"ACC synthase activity","type":"related"},{"name":"L-VG deaminase activity","type":"related"},{"name":"L-vinylglycine deaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase (1-aminocyclopropane-1-carboxylate-forming)","type":"related"},{"name":"S-adenosyl-L-methionine methylthioadenosine-lyase activity","type":"related"},{"name":"aminocyclopropanecarboxylate synthase activity","type":"related"},{"name":"aminocyclopropanecarboxylic acid synthase activity","type":"related"}],"termid":"GO:0016847"}


id: PBO:0050931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 10","termid":"PBO:0050931"}


id: GO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell receptor signaling pathway","termid":"GO:0050855"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell receptor signaling pathway","synonyms":[{"name":"activation of B cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of B cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signalling pathway","type":"exact"},{"name":"stimulation of B cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of B cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of B cell receptor signaling pathway","type":"exact"},{"name":"upregulation of B cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050861"}


id: PBO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_acquisition_of_features_of","termid":"PBO:0012539"}


id: PBO:0003219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid11 (predicted)","termid":"PBO:0003219"}


id: PBO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas ligand","termid":"PBO:0047309"}


id: GO:0035103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic release of a transcriptionally active sterol regulatory element binding protein (SREBP) from intracellular membranes, freeing it to move to the nucleus to upregulate transcription of target genes, in response to altered levels of one or more lipids.","definition_xrefs":["GOC:bf","GOC:vw","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein cleavage (obsolete GO:0035103)","synonyms":[{"name":"SREBP cleavage","type":"exact"},{"name":"sterol depletion response, SREBP cleavage","type":"exact"},{"name":"sterol regulatory element binding protein cleavage involved in ER-nuclear sterol response pathway","type":"narrow"}],"termid":"GO:0035103"}


id: FYPO:0004528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial translation phenotype","termid":"FYPO:0000632"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal mitochondrial translation","synonyms":[{"name":"abnormal mitochondrial protein biosynthesis","type":"exact"},{"name":"abnormal mitochondrial protein synthesis","type":"exact"},{"name":"abnormal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004528"}


id: PBO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad50","termid":"PBO:0002219"}


id: SO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Germline genomic DNA of an immunoglobulin/T-cell receptor gene including J-region with 5' UTR (SO:0000204) and 3' UTR (SO:0000205), also designated as J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_gene_segment","synonyms":[{"name":"INSDC_feature:J_segment","type":"exact"},{"name":"J gene","type":"exact"},{"name":"J-GENE","type":"exact"}],"termid":"SO:0000470"}


id: PBO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 11","termid":"PBO:0072081"}


id: GO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hypochlorous acid.","definition_xrefs":["GOC:add","PMID:10085024","PMID:176150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypochlorous acid metabolic process","termid":"GO:0002148"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hypochlorous acid biosynthetic process","synonyms":[{"name":"HClO biosynthetic process","type":"exact"},{"name":"HOCl biosynthetic process","type":"exact"},{"name":"hypochlorite biosynthetic process","type":"related"},{"name":"hypochlorous acid biosynthesis","type":"exact"}],"termid":"GO:0002149"}


id: GO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GARP complex.","definition_xrefs":["PMID:20163565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GARP complex binding","termid":"GO:0062069"}


id: PR:P30655
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.13c","secondary_identifiers":["UniProtKB:P30655"],"synonyms":[{"name":"SPAC4A8.13c","type":"related"},{"name":"Spom972h-PSMB5","type":"exact"},{"name":"macropain subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicatalytic endopeptidase complex subunit pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"proteasome component pts1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30655"}


id: PBO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium ion transmembrane transporter Mrs2 (predicted)","termid":"PBO:0018030"}


id: PBO:0083187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YFR011C; identified by expression profiling and mass spectrometry","termid":"PBO:0083187"}


id: GO:0042579
data:
  {"annotated_genes":["SJAG_02848","SJAG_02384","SJAG_00326","SJAG_02693","SJAG_02496","SJAG_00702","SJAG_03440","SJAG_03324","SJAG_00947","SJAG_04467","SJAG_03781","SJAG_02630","SJAG_03715","SJAG_03493","SJAG_02997","SJAG_04299","SJAG_02619","SJAG_04146","SJAG_00974","SJAG_00114","SJAG_03166","SJAG_04823","SJAG_01474","SJAG_00891","SJAG_04315","SJAG_04763","SJAG_01854","SJAG_01685","SJAG_01165","SJAG_03671","SJAG_00706","SJAG_03091","SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110035,70760,113478,107191,100745,111017,107174],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[73304,83988,112480,76925,113365,86137,92539,71563,63432,74596,96824,72995,102122,106583,91030,70636,111018,100683],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005778"},{"annotations":[73211,72068,71390,105004,109252,73876,70281,75553,78400,95367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005777"}]},"cv_name":"cellular_component","definition":"Cytoplasmic organelles, spherical or oval in shape, that are bounded by a single membrane and contain oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_00974":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"microbody","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microbody"],"termid":"GO:0042579","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: PBO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 2","termid":"PBO:0071461"}


id: PBO:0041566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 96","termid":"PBO:0041566"}


id: PBO:0085059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi","termid":"PBO:0085059"}


id: GO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by host of symbiont cells","secondary_identifiers":["GO:0051852"],"synonyms":[{"name":"disruption by host of symbiont cells","type":"broad"}],"termid":"GO:0051873"}


id: PBO:0073539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing ring finger 1","termid":"PBO:0073539"}


id: PBO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Fic1","termid":"PBO:0003675"}


id: PATO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's shape being a V-shaped cut.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notched","synonyms":[{"name":"indented","type":"related"}],"termid":"PATO:0001495"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN","EC:1.2.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: PR:O43053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12413:SF0","OMA:SCHPO04028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.01c","secondary_identifiers":["UniProtKB:O43053"],"synonyms":[{"name":"Dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG6","type":"exact"},{"name":"asparagine-linked glycosylation protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43053"}


id: GO:0019914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme cyclin-dependent protein kinase activating kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase regulator activity","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019914"}


id: PR:G2TRL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C186.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.04c","synonyms":[{"name":"Spom972h-SPAC186.04c","type":"exact"}],"termid":"PR:G2TRL1"}


id: PBO:0045997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1","termid":"PBO:0045997"}


id: PBO:0080595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 25","termid":"PBO:0080595"}


id: PBO:0057208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376b","termid":"PBO:0057208"}


id: PBO:0042129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical carcinoma expressed PCNA regulatory lncRNA","termid":"PBO:0042129"}


id: PBO:0039249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L2","termid":"PBO:0039249"}


id: PBO:0088484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase, RRM-containing Rct1","termid":"PBO:0088484"}


id: GO:0021958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the dorsal root ganglion towards target cells in the medulla. This axonal process is a member of those that make up the gracilis tract, a group of axons that are from neurons involved in proprioception from the lower trunk and lower limb.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph","GOC:dgh","PMID:12867698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gracilis tract morphogenesis","synonyms":[{"name":"tract of Goll morphogenesis","type":"exact"}],"termid":"GO:0021958"}


id: PBO:0032719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_mitotic_metaphase","termid":"PBO:0032719"}


id: PATO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased affinity","termid":"PATO:0002072"}


id: GO:0032825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell activation","termid":"GO:0032816"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"positively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell differentiation","synonyms":[{"name":"activation of natural killer cell differentiation","type":"narrow"},{"name":"positive regulation of NK cell differentiation","type":"exact"},{"name":"positive regulation of natural killer cell development","type":"related"},{"name":"stimulation of natural killer cell differentiation","type":"narrow"},{"name":"up regulation of natural killer cell differentiation","type":"exact"},{"name":"up-regulation of natural killer cell differentiation","type":"exact"},{"name":"upregulation of natural killer cell differentiation","type":"exact"}],"termid":"GO:0032825"}


id: GO:0071664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains a catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["PMID:14661054","GOC:BHF","GOC:vk","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"catenin-TCF7L2 complex","synonyms":[{"name":"catenin-TCF4 complex","type":"exact"}],"termid":"GO:0071664"}


id: PBO:0089791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L59","termid":"PBO:0089791"}


id: PR:000027570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:11242054","PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.1","termid":"PR:000027569"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"SPAC1834.04","type":"related"},{"name":"Spom-hht1","type":"exact"}],"termid":"PR:000027570"}


id: GO:0036423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 3 isopentenyl diphosphate = 3 diphosphate + all-trans-hexaprenyl diphosphate.","definition_xrefs":["EC:2.5.1.83","RHEA:27559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"hexaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09245","MetaCyc:TRANS-PENTAPRENYLTRANSFERASE-RXN"],"synonyms":[{"name":"hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"broad"}],"termid":"GO:0036423"}


id: PBO:0017071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR94","termid":"PBO:0017071"}


id: PBO:0084752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix cochaperone; nucleotide release factor for Ssc1p in protein translocation and folding; also acts as cochaperone for Ssq1p in folding of Fe-S cluster proteins; acts as oxidative sensor to regulate mitochondrial Ssc1p; in presence of oxidative stress, dimeric Mge1p becomes a monomer and unable to regulate Ssc1p function; homolog of E. coli GrpE and human Mge1 (GRPEL1), which also responds to oxidative stress","termid":"PBO:0084752"}


id: PR:000028947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reduced form in Schizosaccharomyces pombe. The reduced Cys are Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Red+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"Spom-TXN/Red+","type":"exact"},{"name":"trx1/Red+","type":"exact"}],"termid":"PR:000028947"}


id: GO:0141070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a MAPK signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18005697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host MAPK cascade","termid":"GO:0052080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host MAPK cascade","synonyms":[{"name":"disruption of host MAP kinase signaling pathway","type":"exact"},{"name":"disruption of host MAPK signal transduction pathway","type":"exact"},{"name":"disruption of host MAPK signaling pathway","type":"exact"},{"name":"symbiont-mediated suppression of host MAPK signal transduction pathway","type":"exact"}],"termid":"GO:0141070"}


id: PBO:0063599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12","termid":"PBO:0063599"}


id: PBO:0034782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC delta-kleisin subunit Nse4","termid":"PBO:0034782"}


id: PBO:0050048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, K (pseudogene)","termid":"PBO:0050048"}


id: PBO:0041586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 1","termid":"PBO:0041586"}


id: GO:0141129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts a host cell surface receptor-mediated signal transduction pathway by binding to and inhibiting the receptor of the pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22714643","PMID:10221874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host signal transduction pathway via antagonism of host cell surface receptor","synonyms":[{"name":"symbiont-mediated perturbation of host signal transduction pathway via antagonism of host cell surface receptor","type":"broad"}],"termid":"GO:0141129"}


id: PBO:0078828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 5-1","termid":"PBO:0078828"}


id: PBO:0083545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps two other dubious ORFs: YPR170C and YPR170W-B","termid":"PBO:0083545"}


id: PBO:0050706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB2-C11orf52 readthrough (NMD candidate)","termid":"PBO:0050706"}


id: SO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region where there is an exchange of genetic material with another genomic region, occurring in somatic cells.","definition_xrefs":["NCBI:cf","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:mitotic","type":"exact"},{"name":"INSDC_qualifier:mitotic_recombination","type":"exact"},{"name":"mitotic recombination region","type":"exact"}],"termid":"SO:0002154"}


id: FYPO:0007680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into one or both strands during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:33568651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}


id: PBO:0085411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane riboflavin transporter; facilitates the uptake of vitamin B2; required for FAD-dependent processes; sequence similarity to mammalian monocarboxylate permeases, however mutants are not deficient in monocarboxylate transport","termid":"PBO:0085411"}


id: PBO:0091638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, implicated in cellular detoxification","termid":"PBO:0091638"}


id: GO:0062064
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93062],"is_not":false,"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a box C/D snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"box C/D snoRNP complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062064","terms_by_termid":{"GO:0062064":null}}


id: PR:Q9Y7T4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1 gene.","definition_xrefs":["UniProtKB:Q9Y7T4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase atg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.08c","synonyms":[{"name":"Spom972h-atg1","type":"exact"},{"name":"autophagy-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T4"}


id: PBO:0084115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element","termid":"PBO:0084115"}


id: GO:0009266
data:
  {"annotated_genes":["SJAG_00436","SJAG_04388","SJAG_04187","SJAG_04567","SJAG_03527","SJAG_02381","SJAG_04055","SJAG_03815","SJAG_01186"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77796,99802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[100439,110757,91296,110758,105378,105379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_02381":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_04055":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to temperature stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"response to thermal stimulus","type":"exact"}],"termid":"GO:0009266","terms_by_termid":{"GO:0034605":null,"GO:0070370":null,"GO:0071502":null}}


id: PBO:0057490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 608","termid":"PBO:0057490"}


id: PBO:0040620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF-activated non-protein coding RNA","termid":"PBO:0040620"}


id: GO:0046490
data:
  {"annotated_genes":["SJAG_02380","SJAG_04307","SJAG_03349","SJAG_04865","SJAG_01474","SJAG_01187","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[76024,78705,110194,73877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[106716,110741],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01474":null,"SJAG_02380":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isopentenyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"IPP metabolic process","type":"exact"},{"name":"IPP metabolism","type":"exact"},{"name":"isopentenyl diphosphate metabolism","type":"exact"},{"name":"isopentenyl pyrophosphate metabolic process","type":"exact"},{"name":"isopentenyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0046490","terms_by_termid":{"GO:0009240":null,"GO:0019287":null,"GO:2001211":null}}


id: PBO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1752 family protein, involved in regulation of transcription (predicted)","termid":"PBO:0000872"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: GO:0099027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of presynaptic endocytic zone membrane (obsolete GO:0099027)","termid":"GO:0099027"}


id: GO:0022884
data:
  {"annotated_genes":["SJAG_03502","SJAG_02077","SJAG_01640","SJAG_03560","SJAG_01879","SJAG_03358","SJAG_00175","SJAG_04218","SJAG_00959","SJAG_02208","SJAG_00373","SJAG_04996","SJAG_05259","SJAG_03415","SJAG_01597","SJAG_03515","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93627,70071,72906,73283,73609,77435,101614,72879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[86594,92470,95842,102996,95074,98767,103018,100632,107143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a macromolecule from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00373":null,"SJAG_00959":null,"SJAG_01597":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"macromolecule transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022884","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: GO:0030353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with the fibroblast growth factor receptor to reduce the action of another ligand, the agonist.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"fibroblast growth factor receptor antagonist activity","synonyms":[{"name":"FGF receptor antagonist activity","type":"exact"},{"name":"FGFR antagonist activity","type":"exact"}],"termid":"GO:0030353"}


id: FYPO:0007870
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cell cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:34533984","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to lateral cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell side, with protein mislocalized to cytoplasm, during vegetative growth","type":"related"},{"name":"abolished protein localization to lateral cell cortex, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortex, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to lateral cell cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007870"}


id: FYPO:0002002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has one or more nuclei and more than one septum, and the septa are grouped together between two compartments, one or more of which may contain one or multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"multiseptate vegetative cell, septa grouped","synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"multiseptate cell, septa grouped, during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"},{"name":"vegetative cell with premature septation","type":"related"}],"termid":"FYPO:0002002"}


id: PBO:0050757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 19","termid":"PBO:0050757"}


id: GO:1990424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a protein arginine = ADP + protein arginine phosphate.","definition_xrefs":["PMID:22517742","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003824","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein arginine kinase activity","synonyms":[{"name":"protein-arginine kinase activity","type":"exact"}],"termid":"GO:1990424"}


id: GO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to copper ion","termid":"GO:0046688"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to copper ion","synonyms":[{"name":"cellular response to copper","type":"exact"}],"termid":"GO:0071280"}


id: PBO:0087697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; ORC4 has a paralog, RIF2, that arose from the whole genome duplication","termid":"PBO:0087697"}


id: PBO:0013464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2","termid":"PBO:0013464"}


id: PBO:0084033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi PI4K effector, PtdIns4P sensor, and retention receptor; interacts with glycosyltransferases, and in the PtdIns4P-bound state mediates retention of these enzymes in the Golgi; PtdIns4P sensor that limits PI4K signaling and regulates lipid homeostasis, interacting with the catalytic domain of Sac1p, the major PtdIns4P phosphatase, directing dephosphosphorylation of the Golgi pool of PtdIns4P; tetramerization required for function; contributes to telomere function; ortholog of human GOLPH3","termid":"PBO:0084033"}


id: GO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the second transesterification reaction of U12-type spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. The catalytic site is thought to be formed by U6 and/or U2 snRNAs and/or associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"gene_count":0,"genotype_count":0,"name":"obsolete second U12-type spliceosomal transesterification activity (obsolete GO:0000367)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"second U12-type spliceosomal transesterification activity","type":"exact"}],"termid":"GO:0000367"}


id: PBO:0034731
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dyskeratosis congenita","termid":"PBO:0034731"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: GO:1902180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of verruculogen.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23649274"],"gene_count":0,"genotype_count":0,"name":"obsolete verruculogen catabolic process (obsolete GO:1902180)","synonyms":[{"name":"verruculogen breakdown","type":"exact"},{"name":"verruculogen catabolism","type":"exact"},{"name":"verruculogen degradation","type":"exact"}],"termid":"GO:1902180"}


id: PBO:0040929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 like","termid":"PBO:0040929"}


id: PBO:0070911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 19","termid":"PBO:0070911"}


id: FYPO:0003131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"normal protein phosphorylation during cellular response to IR","type":"exact"},{"name":"normal protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003131"}


id: PBO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0035803"}


id: PBO:0031232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_metaphase/anaphase_transition","termid":"PBO:0031232"}


id: MOD:00855
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysinium (N6-protonated L-lysine) residue to an N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["PubMed:7093227","Unimod:37#K","PubMed:6778808","PubMed:12590383","OMSSA:15","PubMed:4304194","PubMed:8453381","PubMed:3145979","DeltaMass:0"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-lysine (L-lysinium) residue","termid":"MOD:00854"},{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine (from L-lysinium residue)","synonyms":[{"name":"N6Me3Lys","type":"exact"},{"name":"trimethylk","type":"exact"}],"termid":"MOD:00855"}


id: PBO:0058475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5583-1","termid":"PBO:0058475"}


id: PR:O43033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- oms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C3B9.04, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.04","synonyms":[{"name":"Spom972h-oms1","type":"exact"}],"termid":"PR:O43033"}


id: PR:Q09820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of nonsense transcripts 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00313","PANTHER:PTHR10887:SF26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase upf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.06c","secondary_identifiers":["UniProtKB:Q09820"],"synonyms":[{"name":"Spom972h-UPF1","type":"exact"},{"name":"nonsense-mediated mRNA decay protein upf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulator of nonsense transcripts 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"up-frameshift suppressor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09820"}


id: PBO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 53","termid":"PBO:0050350"}


id: GO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a T helper 2 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["CL:0000546","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell activation","synonyms":[{"name":"Th2 cell activation","type":"exact"}],"termid":"GO:0035712"}


id: PBO:0053204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 3","termid":"PBO:0053204"}


id: PBO:0073787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 7","termid":"PBO:0073787"}


id: PBO:0057296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513a-1","termid":"PBO:0057296"}


id: GO:0045566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045566)","synonyms":[{"name":"activation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 1 biosynthetic process","type":"exact"}],"termid":"GO:0045566"}


id: PBO:0048062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 11","termid":"PBO:0048062"}


id: PBO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1614","termid":"PBO:0052328"}


id: GO:0010111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the glyoxysome. A glyoxysome is a microbody that contains the enzymes of the glyoxylate pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"glyoxysome organization","synonyms":[{"name":"glyoxysome organisation","type":"exact"},{"name":"glyoxysome organization and biogenesis","type":"related"}],"termid":"GO:0010111"}


id: GO:0075148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of signal transduction in response to host (obsolete GO:0075148)","synonyms":[{"name":"positive regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075148"}


id: PBO:0077900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase beta 2","termid":"PBO:0077900"}


id: PBO:0053457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 410","termid":"PBO:0053457"}


id: PBO:0068383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 185","termid":"PBO:0068383"}


id: PBO:0088508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd3","termid":"PBO:0088508"}


id: PBO:0053348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 237","termid":"PBO:0053348"}


id: PBO:0005469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit V (predicted)","termid":"PBO:0005469"}


id: FYPO:0003394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from NADH to ubiquinone is decreased.","definition_xrefs":["GO:0006120","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular respiration","termid":"FYPO:0000342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"decreased NADH cytochrome c oxidoreductase","type":"related"},{"name":"decreased NADH dehydrogenase (quinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"decreased mitochondrial electron transport, NADH to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial electron transport, NADH to ubiquinone, during vegetative growth","type":"exact"},{"name":"reduced mitochondrial electron transport, NADH to ubiquinone","type":"exact"}],"termid":"FYPO:0003394"}


id: GO:0003148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outflow tract septum are generated and organized. The outflow tract septum is a partition in the outflow tract.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outflow tract septum morphogenesis","termid":"GO:0003148"}


id: GO:0038121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 21 receptor activity","synonyms":[{"name":"CCL21 receptor activity","type":"related"}],"termid":"GO:0038121"}


id: GO:1905013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 'de novo' NAD biosynthetic process from tryptophan.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:19843166","GOC:bf","GOC:TermGenie","PMID:12140278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of NAD metabolic process","termid":"GO:1902689"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from tryptophan","termid":"GO:1905012"},{"relation_name":"negatively_regulates","term_name":"'de novo' NAD biosynthetic process from tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0055086"],"is_obsolete":false,"name":"negative regulation of 'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"down regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"down-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"downregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"downregulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"inhibition of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"inhibition of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"negative regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905013"}


id: FYPO:0003408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methylglyoxal. Cells stop growing (and may die) at a concentration of methylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to methylglyoxal","synonyms":[{"name":"hypersensitive to methylglyoxal","type":"exact"},{"name":"sensitive to MG","type":"broad"},{"name":"sensitive to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to methylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0003408"}


id: PBO:0062352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 3 pseudogene","termid":"PBO:0062352"}


id: MOD:01498
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01498"}


id: PBO:0044459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 45, pseudogene","termid":"PBO:0044459"}


id: PBO:0034169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_during","termid":"PBO:0034169"}


id: PR:Q9UTI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ethanolamine-phosphate cytidylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10739:SF14","PRO:DNx","OMA:SCHPO01554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.05c","secondary_identifiers":["UniProtKB:Q9UTI6"],"synonyms":[{"name":"CTP:phosphoethanolamine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCYT2","type":"exact"},{"name":"phosphorylethanolamine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI6"}


id: PBO:0028045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization","termid":"PBO:0028045"}


id: PBO:0030579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_glycine_level","termid":"PBO:0030579"}


id: GO:0050261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ribofuranose = D-ribulose.","definition_xrefs":["RHEA:20796","EC:5.3.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"ribose isomerase activity","secondary_identifiers":["KEGG_REACTION:R01081","MetaCyc:RIBOSE-ISOMERASE-RXN"],"synonyms":[{"name":"D-ribose aldose-ketose-isomerase activity","type":"related"},{"name":"D-ribose isomerase activity","type":"related"},{"name":"D-ribose ketol-isomerase activity","type":"related"}],"termid":"GO:0050261"}


id: PBO:0017702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase Npt1 (predicted)","termid":"PBO:0017702"}


id: GO:0018961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.","definition_xrefs":["UM-BBD_pathwayID:pcp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentachlorophenol metabolic process","synonyms":[{"name":"PCP metabolic process","type":"exact"},{"name":"PCP metabolism","type":"exact"},{"name":"pentachlorophenol metabolism","type":"exact"}],"termid":"GO:0018961"}


id: PBO:0057608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-5","termid":"PBO:0057608"}


id: GO:0003812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Arg-Ser bond in complement component C3 alpha-chain to yield C3a and C3b, and Arg bond in complement component C5 alpha-chain to yield C5a and C5b.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete alternative-complement-pathway C3/C5 convertase activity (obsolete GO:0003812)","synonyms":[{"name":"(C3b)n,Bb","type":"related"},{"name":"(CVF)-dependent glycine-rich-beta-glucoprotein","type":"related"},{"name":"C3 convertase activity","type":"broad"},{"name":"C3 proactivator","type":"related"},{"name":"C3b,Bb,CVF,Bb,C5 convertase activity","type":"related"},{"name":"C5 convertase activity","type":"broad"},{"name":"CVF,Bb","type":"related"},{"name":"alternative complement pathway C3(C5) convertase activity","type":"related"},{"name":"alternative-complement-pathway C3/C5 convertase activity","type":"exact"},{"name":"cobra venom factor-dependent C3 convertase","type":"narrow"},{"name":"complement C 3(C 5) convertase (amplification)","type":"related"},{"name":"complement component C3/C5 convertase (alternative) activity","type":"related"},{"name":"complement factor B activity","type":"related"},{"name":"glycine-rich beta-glycoprotein","type":"related"},{"name":"heat-labile factor","type":"related"},{"name":"proenzyme factor B","type":"exact"},{"name":"properdin factor B activity","type":"related"}],"termid":"GO:0003812"}


id: GO:0102473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol dibenzoylmethane tautomer + UDP-alpha-D-glucose = 8C-beta-D-glucosyl-2-hydroxyeriodictyol + UDP(3-) + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"eriodictyol dibenzoylmethane tautomer 8C-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14079"],"termid":"GO:0102473"}


id: GO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:mah","GOC:mtg_muscle","GOC:ef","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031450"}


id: GO:0032463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein homooligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein oligomerization","termid":"GO:0032460"},{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"negatively_regulates","term_name":"protein homooligomerization","termid":"GO:0051260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein homooligomerization","synonyms":[{"name":"down regulation of protein homooligomerization","type":"exact"},{"name":"down-regulation of protein homooligomerization","type":"exact"},{"name":"downregulation of protein homooligomerization","type":"exact"},{"name":"inhibition of protein homooligomerization","type":"narrow"}],"termid":"GO:0032463"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: GO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont xylan (obsolete GO:0052420)","termid":"GO:0052420"}


id: PBO:0074933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 100","termid":"PBO:0074933"}


id: PATO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches terminating at the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craspedodromous","termid":"PATO:0001969"}


id: PBO:0084411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m(7)GpppX pyrophosphatase regulator; non-essential, stress induced regulatory protein; modulates m7G-oligoribonucleotide metabolism; inhibits Dcs1p; regulated by Msn2p, Msn4p, and the Ras-cAMP-cAPK signaling pathway; mutant has increased aneuploidy tolerance; DCS2 has a paralog, DCS1, that arose from the whole genome duplication","termid":"PBO:0084411"}


id: PBO:0085757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in negative regulation of PolIII transcription; effector kinase of the TOR signaling pathway and phosphorylates Rpc53p to regulate ribosome and tRNA biosynthesis; member of the LAMMER family of protein kinases, which are serine/threonine kinases also capable of phosphorylating tyrosine residues; capable of autophosphorylation","termid":"PBO:0085757"}


id: FYPO:0006188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is decreased. Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:19570908","PomBase:mah","PMID:20110347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"decreased rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"reduced rate of protein exchange in actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0006188"}


id: GO:1990083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that inactivates the function of DnaA by inhibiting the phosphorylation of DnaA-ADP to DnaA-ATP and thereby preventing multiple events of replication initiation. In E. coli, this complex is composed of DnaA and Hda.","definition_xrefs":["GOC:bhm","PMID:21708944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication inhibiting complex","termid":"GO:1990078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaA-Hda complex","termid":"GO:1990083"}


id: PATO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000111 flooding sensitivity (obsolete PATO:0000111)","termid":"PATO:0000111"}


id: GO:0062084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"}


id: PBO:0026906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_multiseptate_cell_with_central_constriction","termid":"PBO:0026906"}


id: GO:0030657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0030657)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0030657"}


id: GO:0102879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-thujopsene + diphosphoric acid.","definition_xrefs":["RHEA:30375","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(+)-thujopsene synthase activity","secondary_identifiers":["EC:4.2.3.79","MetaCyc:RXN-8418"],"termid":"GO:0102879"}


id: PBO:0089149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF126 ortholog","termid":"PBO:0089149"}


id: PBO:0082974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic serine/threonine protein kinase; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; VHS1 has a paralog, SKS1, that arose from the whole genome duplication","termid":"PBO:0082974"}


id: PBO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin like 1","termid":"PBO:0042931"}


id: PBO:0075275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19","termid":"PBO:0075275"}


id: PR:G2TRL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C922.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.09","synonyms":[{"name":"Spom972h-SPAC922.09","type":"exact"}],"termid":"PR:G2TRL0"}


id: SO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid sequence that is integrated within the host chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrated_plasmid","synonyms":[{"name":"integrated plasmid","type":"exact"}],"termid":"SO:0001040"}


id: GO:0160111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the A tubule of the axonemal microtubule doublet that helps stabilize the A tubule.","definition_xrefs":["PMID:37295417","PMID:29430673","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"axonemal A tubule inner sheath","termid":"GO:0160111"}


id: GO:0015492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phenylalanine(out) + H+(out) = phenylalanine(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid:proton symporter activity","termid":"GO:0015494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"phenylalanine:proton symporter activity","synonyms":[{"name":"phenylalanine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015492"}


id: GO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor production","termid":"GO:0090269"}


id: FYPO:0000806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Golgi organization is abnormal. Golgi organization results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.","definition_xrefs":["GO:0007030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal Golgi organization","synonyms":[{"name":"abnormal Golgi organisation","type":"exact"},{"name":"abnormal Golgi organization during mitotic cell cycle","type":"related"},{"name":"abnormal Golgi organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000806"}


id: PBO:0079630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q2","termid":"PBO:0079630"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: GO:1901208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart looping.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart looping","termid":"GO:1901207"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"heart looping","termid":"GO:0001947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart looping","synonyms":[{"name":"down regulation of cardiac looping","type":"exact"},{"name":"down regulation of heart looping","type":"exact"},{"name":"down-regulation of cardiac looping","type":"exact"},{"name":"down-regulation of heart looping","type":"exact"},{"name":"downregulation of cardiac looping","type":"exact"},{"name":"downregulation of heart looping","type":"exact"},{"name":"inhibition of cardiac looping","type":"exact"},{"name":"inhibition of heart looping","type":"narrow"},{"name":"negative regulation of cardiac looping","type":"exact"}],"termid":"GO:1901208"}


id: PBO:0049047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37 like 1","termid":"PBO:0049047"}


id: PATO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in the bearer by virtue of the bearer's ability to refract light.","definition_xrefs":["biology-online:biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractivity","termid":"PATO:0001372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refractile","termid":"PATO:0001423"}


id: GO:0102952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + coniferyl aldehyde = H+ + coniferaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose:coniferaldehyde 4-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-91","RHEA:57708"],"termid":"GO:0102952"}


id: PBO:0063658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 3, pseudogene","termid":"PBO:0063658"}


id: GO:1902545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["PMID:15518571","GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA N-glycosylase activity (obsolete GO:1902545)","synonyms":[{"name":"down regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down regulation of DNA glycosylase activity","type":"exact"},{"name":"down regulation of endonuclease VIII activity","type":"related"},{"name":"down-regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down-regulation of DNA glycosylase activity","type":"exact"},{"name":"down-regulation of endonuclease VIII activity","type":"related"},{"name":"downregulation of DNA N-glycosylase activity","type":"exact"},{"name":"downregulation of DNA glycosylase activity","type":"exact"},{"name":"downregulation of endonuclease VIII activity","type":"related"},{"name":"inhibition of DNA N-glycosylase activity","type":"narrow"},{"name":"inhibition of DNA glycosylase activity","type":"narrow"},{"name":"inhibition of endonuclease VIII activity","type":"related"},{"name":"negative regulation of DNA glycosylase activity","type":"exact"},{"name":"negative regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902545"}


id: PBO:0058140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-2","termid":"PBO:0058140"}


id: FYPO:0006966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular acetyl-CoA level","synonyms":[{"name":"increased acetyl-CoA accumulation","type":"related"},{"name":"increased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetyl-CoA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006966"}


id: GO:0102716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A28 + 2-oxoglutarate + O2 = (2betaOH)-gibberellin28 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin A28,oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6547"],"termid":"GO:0102716"}


id: PBO:0061709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 4","termid":"PBO:0061709"}


id: GO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm formation","termid":"GO:0048341"}


id: GO:1905695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bc","PMID:23767959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidic acid biosynthetic process","termid":"GO:1905693"},{"relation_name":"positively_regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"activation of phosphatidic acid anabolism","type":"narrow"},{"name":"activation of phosphatidic acid biosynthesis","type":"narrow"},{"name":"activation of phosphatidic acid biosynthetic process","type":"narrow"},{"name":"activation of phosphatidic acid formation","type":"narrow"},{"name":"activation of phosphatidic acid synthesis","type":"narrow"},{"name":"positive regulation of phosphatidic acid anabolism","type":"exact"},{"name":"positive regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidic acid formation","type":"exact"},{"name":"positive regulation of phosphatidic acid synthesis","type":"exact"},{"name":"up regulation of phosphatidic acid anabolism","type":"exact"},{"name":"up regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"up regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidic acid formation","type":"exact"},{"name":"up regulation of phosphatidic acid synthesis","type":"exact"},{"name":"up-regulation of phosphatidic acid anabolism","type":"exact"},{"name":"up-regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidic acid formation","type":"exact"},{"name":"up-regulation of phosphatidic acid synthesis","type":"exact"},{"name":"upregulation of phosphatidic acid anabolism","type":"exact"},{"name":"upregulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"upregulation of phosphatidic acid biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidic acid formation","type":"exact"},{"name":"upregulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905695"}


id: GO:0033404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"UUG codon-amino acid adaptor activity","synonyms":[{"name":"TTG codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033404"}


id: PBO:0110431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WTAP pseudogene 1","termid":"PBO:0110431"}


id: GO:0010190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of cytochrome b6f complex, a complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"cytochrome b6f complex assembly","synonyms":[{"name":"cytochrome b6f complex biogenesis","type":"exact"}],"termid":"GO:0010190"}


id: PBO:0050733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 19","termid":"PBO:0050733"}


id: PBO:0087000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-family GTPase interacting protein and Cdc42p effector; required with Gic1p for cell polarity establishment and initiation of budding; involved in recruitment of septins to the presumptive bud site; interacts with Cdc42p via the Cdc42/Rac-interactive binding (CRIB) domain and with PI(4,5)P2 via a polybasic region; gic1 gic2 double mutants are defective for polarizing Cdc42p at elevated temperature, so may function both up- and downstream of Cdc42p; regulates mitotic exit","termid":"PBO:0087000"}


id: GO:0097123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A1-CDK2 complex","termid":"GO:0097123"}


id: MOD:02032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex(2) Hex(4) HexNAc(5)","definition_xrefs":["Unimod:1785","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dHex2Hex4HexNAc5 N4-glycosylated asparagine","synonyms":[{"name":"dHex(2) Hex(4) HexNAc(5)","type":"related"}],"termid":"MOD:02032"}


id: GO:0097372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 18) + H2O = histone H3 L-lysine (position 18) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 18 of the histone H3 protein.","definition_xrefs":["PMID:22722849","PMID:28450737","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0019213","GO:0016810","GO:0033558"],"is_obsolete":false,"name":"NAD-dependent histone H3K18 deacetylase activity","synonyms":[{"name":"NAD-dependent histone H3-K18 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K18 specific)","type":"exact"}],"termid":"GO:0097372"}


id: PBO:0077535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 248","termid":"PBO:0077535"}


id: GO:0032695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-12 production","termid":"GO:0032655"},{"relation_name":"negatively_regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-12 production","secondary_identifiers":["GO:0045083","GO:2001183"],"synonyms":[{"name":"down regulation of interleukin-12 production","type":"exact"},{"name":"down-regulation of interleukin-12 production","type":"exact"},{"name":"downregulation of interleukin-12 production","type":"exact"},{"name":"inhibition of interleukin-12 production","type":"narrow"},{"name":"negative regulation of CLMF production","type":"related"},{"name":"negative regulation of IL-12 production","type":"exact"},{"name":"negative regulation of NKSF production","type":"related"},{"name":"negative regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032695"}


id: PBO:0044986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 37","termid":"PBO:0044986"}


id: GO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb bend over time, from its formation to the mature structure. The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb bend development","termid":"GO:0072065"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"},{"relation_name":"part_of","term_name":"metanephric long descending thin limb development","termid":"GO:0072269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb bend development","termid":"GO:0072226"}


id: GO:1905159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GOC:TermGenie","PMID:617517","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Factor XII activation (obsolete GO:1905159)","synonyms":[{"name":"down regulation of Factor XII activation","type":"exact"},{"name":"down regulation of Hageman factor activation","type":"exact"},{"name":"down-regulation of Factor XII activation","type":"exact"},{"name":"down-regulation of Hageman factor activation","type":"exact"},{"name":"downregulation of Factor XII activation","type":"exact"},{"name":"downregulation of Hageman factor activation","type":"exact"},{"name":"inhibition of Factor XII activation","type":"narrow"},{"name":"inhibition of Hageman factor activation","type":"narrow"},{"name":"negative regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905159"}


id: PBO:0031292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype","termid":"PBO:0031292"}


id: GO:0140496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gamma-tubulin complex.","definition_xrefs":["PMID:30174135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"gamma-tubulin complex binding","termid":"GO:0140496"}


id: PBO:0041949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 1, beta catenin antagonist","termid":"PBO:0041949"}


id: GO:0014025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a thickened region of the neurectoderm that is roughly triangular in cross section. The neural keel develops from the neural plate and develops into the neural rod. Neural keel formation occurs during primary neurulation in teleosts.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural rod formation","termid":"GO:0014023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural keel formation","termid":"GO:0014025"}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: GO:0080173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial contact step made between the male gamete and the female gamete during double fertilization forming a zygote and endosperm. An example can be found in Arabidopsis thaliana.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"male-female gamete recognition during double fertilization forming a zygote and endosperm","synonyms":[{"name":"gamete recognition","type":"broad"},{"name":"male-female gamete recognition","type":"exact"}],"termid":"GO:0080173"}


id: PR:Q9P6I7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dea2 gene.","definition_xrefs":["UniProtKB:Q9P6I7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.02","synonyms":[{"name":"AAH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dea2","type":"exact"},{"name":"adenine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I7"}


id: GO:0097146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of NOXA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NOXA-BCL-xl complex","termid":"GO:0097146"}


id: PBO:0084634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2843 methylation of the 25S rRNA; S-adenosylmethionine-dependent; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene","termid":"PBO:0084634"}


id: PBO:0067706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 4","termid":"PBO:0067706"}


id: FYECO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000164 anti-tubulin antibodies added (obsolete FYECO:0000164)","synonyms":[{"name":"anti-tubulin antibody added","type":"exact"}],"termid":"FYECO:0000164"}


id: GO:0051162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-arabitol metabolic process","synonyms":[{"name":"L-arabitol metabolism","type":"exact"}],"termid":"GO:0051162"}


id: PBO:0088755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone Nap2","termid":"PBO:0088755"}


id: PBO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 22","termid":"PBO:0050244"}


id: PBO:0039634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 2","termid":"PBO:0039634"}


id: GO:1905205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of connective tissue replacement.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","PMID:25590961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of connective tissue replacement","termid":"GO:1905203"},{"relation_name":"positively_regulates","term_name":"connective tissue replacement","termid":"GO:0097709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue replacement","synonyms":[{"name":"activation of connective tissue replacement","type":"narrow"},{"name":"up regulation of connective tissue replacement","type":"exact"},{"name":"up-regulation of connective tissue replacement","type":"exact"},{"name":"upregulation of connective tissue replacement","type":"exact"}],"termid":"GO:1905205"}


id: PBO:0051012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2","termid":"PBO:0051012"}


id: PBO:0051755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction protein for cytohesin exchange factors 1","termid":"PBO:0051755"}


id: GO:0033566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-tubulin complex localization","synonyms":[{"name":"establishment and maintenance of gamma-tubulin complex localization","type":"exact"},{"name":"gamma-tubulin complex localisation","type":"exact"}],"termid":"GO:0033566"}


id: PR:Q9P3B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1565.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GTPase-activating protein C1565.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.02c","synonyms":[{"name":"Spom972h-SPAC1565.02c","type":"exact"}],"termid":"PR:Q9P3B1"}


id: PBO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_mercury","termid":"PBO:0030152"}


id: GO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac conduction system development","synonyms":[{"name":"cardiac impulse conducting system development","type":"exact"},{"name":"heart conduction system development","type":"exact"}],"termid":"GO:0003161"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: GO:0052202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052202)","synonyms":[{"name":"down regulation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"down-regulation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"downregulation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"inhibition by symbiont of defense-related host cell wall callose deposition","type":"narrow"},{"name":"negative regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host callose deposition","type":"broad"}],"termid":"GO:0052202"}


id: PBO:0040482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 3","termid":"PBO:0040482"}


id: GO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactosyl-glucosyl3-heptosyl3-KDO2-lipid A-bisphosphate + ADP-L-glycero-beta-D-manno-heptose = lipid A-core + ADP + H+.","definition_xrefs":["MetaCyc:RXN0-5127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide heptosyltransferase activity","termid":"GO:0008920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lipid A-core heptosyltransferase activity","secondary_identifiers":["RHEA:30019"],"termid":"GO:0071968"}


id: PBO:0056493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 1","termid":"PBO:0056493"}


id: GO:0018446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinocarveol = pinocarvone + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pinocarveol dehydrogenase activity","termid":"GO:0018446"}


id: PBO:0045395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 2","termid":"PBO:0045395"}


id: PBO:0073669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRT1 regulating lncRNA tumor promoter","termid":"PBO:0073669"}


id: GO:0045572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of imaginal disc growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc growth","termid":"GO:0045570"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"positively_regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc growth","synonyms":[{"name":"activation of imaginal disc growth","type":"narrow"},{"name":"stimulation of imaginal disc growth","type":"narrow"},{"name":"up regulation of imaginal disc growth","type":"exact"},{"name":"up-regulation of imaginal disc growth","type":"exact"},{"name":"upregulation of imaginal disc growth","type":"exact"}],"termid":"GO:0045572"}


id: GO:1902288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["GOC:TermGenie","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to oomycetes","termid":"GO:1902288"}


id: PBO:0061200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor","termid":"PBO:0061200"}


id: FYPO:0006993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased at the right outer repeat region (otr1R) of the centromere.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere outer repeat","termid":"FYPO:0003412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere otr1R","synonyms":[{"name":"decreased centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R region","type":"exact"},{"name":"decreased chromatin silencing at centromeric otr1R","type":"exact"},{"name":"decreased chromatin silencing at pericentric region otr1R","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"decreased heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"decreased heterochromatin silencing at centromere otr1R","type":"exact"},{"name":"reduced chromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006993"}


id: GO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell differentiation","termid":"GO:0051148"},{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"negatively_regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle cell differentiation","synonyms":[{"name":"down regulation of striated muscle cell differentiation","type":"exact"},{"name":"down-regulation of striated muscle cell differentiation","type":"exact"},{"name":"downregulation of striated muscle cell differentiation","type":"exact"},{"name":"inhibition of striated muscle cell differentiation","type":"narrow"}],"termid":"GO:0051154"}


id: PBO:0038846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 15","termid":"PBO:0038846"}


id: SO:1000019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from cytidine to adenine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_A_transversion","synonyms":[{"name":"C to A transversion","type":"exact"}],"termid":"SO:1000019"}


id: GO:0033085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell differentiation in thymus","synonyms":[{"name":"negative regulation of T cell development in thymus","type":"related"},{"name":"negative regulation of thymic T cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033085"}


id: PBO:0085440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polynucleotide kinase present on rDNA; required for efficient transcription termination by RNA polymerase I; functions with Las1p in a conserved mechanism to cleave pre-rRNA at a specific site during rRNA processing and ribosome biogenesis; required for cell growth; mRNA is cell-cycle regulated","termid":"PBO:0085440"}


id: GO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + glyoxylate + H2O = 3-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:10500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-ethylmalate synthase activity","secondary_identifiers":["EC:2.3.3.7","KEGG_REACTION:R01180","MetaCyc:3-ETHYLMALATE-SYNTHASE-RXN"],"synonyms":[{"name":"2-ethyl-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"3-ethylmalate glyoxylate-lyase (CoA-butanoylating) activity","type":"related"},{"name":"butanoyl-CoA:glyoxylate C-butanoyltransferase (thioester-hydrolysing, 1-carboxypropyl-forming)","type":"related"}],"termid":"GO:0050441"}


id: FYPO:0005942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of intergenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intergenic meiotic recombination reflects crossovers between homologous chromosomes.","definition_xrefs":["PomBase:mah","PMID:19752195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal intergenic meiotic recombination frequency","synonyms":[{"name":"normal meiotic intergenic recombination frequency","type":"exact"}],"termid":"FYPO:0005942"}


id: PBO:0087075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication","termid":"PBO:0087075"}


id: PBO:0038299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_date","termid":"PBO:0038299"}


id: PR:Q96WV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02555","PANTHER:PTHR19876:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.04","secondary_identifiers":["UniProtKB:Q96WV5"],"synonyms":[{"name":"Spom972h-COPA","type":"exact"},{"name":"alpha-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV5"}


id: GO:1904546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of cAMP-dependent protein kinase activity that is involved in negative regulation of glucose mediated signaling pathway.","definition_xrefs":["GO_REF:0000060","PMID:21118717","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP-dependent protein kinase activity involved in negative regulation of glucose mediated signaling pathway (obsolete GO:1904546)","synonyms":[{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in negative regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in negative regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of AMPK involved in down regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of AMPK involved in down regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of AMPK involved in down-regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of AMPK involved in down-regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of AMPK involved in downregulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of AMPK involved in downregulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of AMPK involved in inhibition of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of AMPK involved in inhibition of glucose mediated signalling","type":"related"},{"name":"negative regulation of AMPK involved in negative regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of AMPK involved in negative regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in negative regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of PKA C involved in down regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA C involved in down regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA C involved in down-regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA C involved in down-regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA C involved in downregulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA C involved in downregulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA C involved in inhibition of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA C involved in inhibition of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA C involved in negative regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA C involved in negative regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA involved in down regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA involved in down regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA involved in down-regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA involved in down-regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA involved in downregulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA involved in downregulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA involved in inhibition of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA involved in inhibition of glucose mediated signalling","type":"related"},{"name":"negative regulation of PKA involved in negative regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of PKA involved in negative regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of STK22 involved in down regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of STK22 involved in down regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of STK22 involved in down-regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of STK22 involved in down-regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of STK22 involved in downregulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of STK22 involved in downregulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of STK22 involved in inhibition of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of STK22 involved in inhibition of glucose mediated signalling","type":"related"},{"name":"negative regulation of STK22 involved in negative regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of STK22 involved in negative regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in negative regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of cAMP-dependent protein kinase activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in negative regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in down regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in down regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in down-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in down-regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in downregulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in downregulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in inhibition of glucose mediated signaling pathway","type":"narrow"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in inhibition of glucose mediated signalling","type":"narrow"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in negative regulation of glucose mediated signaling pathway","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity involved in negative regulation of glucose mediated signalling","type":"exact"},{"name":"negative regulation of protein kinase A activity involved in down regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of protein kinase A activity involved in down regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of protein kinase A activity involved in down-regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of protein kinase A activity involved in down-regulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of protein kinase A activity involved in downregulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of protein kinase A activity involved in downregulation of glucose mediated signalling","type":"related"},{"name":"negative regulation of protein kinase A activity involved in inhibition of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of protein kinase A activity involved in inhibition of glucose mediated signalling","type":"related"},{"name":"negative regulation of protein kinase A activity involved in negative regulation of glucose mediated signaling pathway","type":"related"},{"name":"negative regulation of protein kinase A activity involved in negative regulation of glucose mediated signalling","type":"related"}],"termid":"GO:1904546"}


id: FYPO:0005285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cysteine-type endopeptidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal cysteine-type peptidase activity","termid":"FYPO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased cysteine-type endopeptidase activity","synonyms":[{"name":"decreased caspase activity","type":"narrow"},{"name":"reduced cysteine-type endopeptidase activity","type":"exact"}],"termid":"FYPO:0005285"}


id: GO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in nonribosomal peptide synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"},{"relation_name":"is_a","term_name":"amino acid activation for nonribosomal peptide biosynthetic process","termid":"GO:0043041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA aminoacylation for nonribosomal peptide biosynthetic process","synonyms":[{"name":"tRNA aminoacylation for nonribosomal peptide anabolism","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide biosynthesis","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide formation","type":"exact"},{"name":"tRNA aminoacylation for nonribosomal peptide synthesis","type":"exact"}],"termid":"GO:0043040"}


id: PBO:0031002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_dithiothreitol","termid":"PBO:0031002"}


id: GO:0004113
data:
  {"annotated_genes":["SJAG_00956","SJAG_01428"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86353,96577],"is_not":false,"summary":null,"term":"GO:0004113"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate.","definition_xrefs":["EC:3.1.4.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01428":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14489","MetaCyc:3.1.4.37-RXN"],"synonyms":[{"name":"2',3'-cyclic AMP phosphodiesterase activity","type":"related"},{"name":"2',3'-cyclic nucleoside monophosphate phosphodiesterase","type":"broad"},{"name":"2',3'-cyclic nucleotide 3'-phosphodiesterase activity","type":"exact"},{"name":"2',3'-cyclic nucleotide 3'-phosphohydrolase activity","type":"related"},{"name":"2',3'-cyclic nucleotide phosphohydrolase","type":"broad"},{"name":"2':3'-CNMP-3'-ase activity","type":"related"},{"name":"2':3'-cyclic nucleotide 3'-phosphodiesterase activity","type":"related"},{"name":"CNPase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide 3'-phosphodiesterase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide phosphodiesterase","type":"broad"},{"name":"cyclic-CMP phosphodiesterase activity","type":"narrow"},{"name":"nucleoside-2',3'-cyclic-phosphate 2'-nucleotidohydrolase activity","type":"related"}],"termid":"GO:0004113","terms_by_termid":{"GO:0004113":null}}


