# terms

id: PBO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCDC55 ortholog","termid":"PBO:0002858"}


id: GO:0033572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of transferrin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transferrin transport","synonyms":[{"name":"melanotransferrin transport","type":"exact"}],"termid":"GO:0033572"}


id: PBO:0076509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 9","termid":"PBO:0076509"}


id: PBO:0072757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 7","termid":"PBO:0072757"}


id: PBO:0067813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 115","termid":"PBO:0067813"}


id: PBO:0071967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A6","termid":"PBO:0071967"}


id: FYPO:0002926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and polyadenylated RNA (poly(A)RNA) does not occur. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-RNA interaction","termid":"FYPO:0002133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0002131","FYPO:0001985"],"is_obsolete":false,"name":"abolished poly(A) RNA binding","synonyms":[{"name":"abolished adenosine recognition in polyA tail","type":"narrow"},{"name":"abolished polyA RNA binding","type":"exact"},{"name":"abolished polyadenylated RNA binding","type":"exact"},{"name":"abolished protein-poly(A) RNA interaction","type":"exact"},{"name":"poly(A) RNA binding abolished","type":"exact"}],"termid":"FYPO:0002926"}


id: PBO:0070532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 31","termid":"PBO:0070532"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: PBO:0090751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho5","termid":"PBO:0090751"}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: PBO:0071199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 40","termid":"PBO:0071199"}


id: PBO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 29","termid":"PBO:0071526"}


id: PBO:0026689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tamoxifen","termid":"PBO:0026689"}


id: FYPO:0002709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable spindle pole body.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spindle pole body absent from cell","synonyms":[{"name":"SPB absent from cell","type":"exact"},{"name":"absent spindle pole body","type":"exact"}],"termid":"FYPO:0002709"}


id: GO:0051292
data:
  {"annotated_genes":["SJAG_01833"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103190],"is_not":false,"summary":null,"term":"GO:0051292"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore organization","termid":"GO:0006999"},{"relation_name":"is_a","term_name":"pore complex assembly","termid":"GO:0046931"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01833":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"nuclear pore complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NPC assembly","type":"exact"},{"name":"nuclear pore assembly","type":"exact"},{"name":"nuclear pore biogenesis","type":"exact"},{"name":"nuclear pore biosynthesis","type":"exact"},{"name":"nuclear pore complex biogenesis","type":"exact"},{"name":"nuclear pore complex biosynthesis","type":"exact"},{"name":"nuclear pore complex formation","type":"exact"},{"name":"nuclear pore formation","type":"exact"}],"termid":"GO:0051292","terms_by_termid":{"GO:0051292":null}}


id: PBO:0090389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase-like, unknown specificity","termid":"PBO:0090389"}


id: GO:0008252
data:
  {"annotated_genes":["SJAG_02593","SJAG_02582","SJAG_01055","SJAG_02959","SJAG_02580","SJAG_03096","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008441"},{"annotations":[109026,109025,89981,86257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008253"},{"annotations":[112407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050484"},{"annotations":[70064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate.","definition_xrefs":["RHEA:22140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01702":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02593":null,"SJAG_02959":null,"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"nucleotidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NSP I","type":"related"},{"name":"NSP II","type":"related"},{"name":"acid nucleotidase activity","type":"related"},{"name":"deoxyinosine-activated nucleotidase (DIAN)","type":"related"},{"name":"deoxyribonucleoside-activated nucleotidase (DAN)","type":"related"},{"name":"nucleotide phosphohydrolase activity","type":"related"},{"name":"nucleotide-specific phosphatase activity","type":"related"}],"termid":"GO:0008252","terms_by_termid":{"GO:0008253":null,"GO:0008441":null,"GO:0050483":null,"GO:0050484":null}}


id: PBO:0038713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 8","termid":"PBO:0038713"}


id: PBO:0067745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 44","termid":"PBO:0067745"}


id: PBO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1 like","termid":"PBO:0042374"}


id: GO:0050307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose 6F-phosphate + H2O = sucrose + phosphate.","definition_xrefs":["MetaCyc:SUCROSE-PHOSPHATASE-RXN","EC:3.1.3.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"sucrose-phosphate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R00805","KEGG_REACTION:R06211","RHEA:19289"],"synonyms":[{"name":"sucrose-6F-phosphate phosphohydrolase activity","type":"exact"},{"name":"sucrose-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050307"}


id: PBO:0076778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEA domain transcription factor 1","termid":"PBO:0076778"}


id: PBO:0086151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear retention of unspliced pre-mRNAs; required along with Mlp1p and Pml1p; anchored to nuclear pore complex via Mlp1p and Mlp2p; found with the subset of nuclear pores farthest from the nucleolus; may interact with ribosomes","termid":"PBO:0086151"}


id: PBO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 133 (pseudogene)","termid":"PBO:0044852"}


id: PBO:0067718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 16","termid":"PBO:0067718"}


id: SO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_noncoding_exon","synonyms":[{"name":"5' nc exon","type":"exact"},{"name":"5' non coding exon","type":"exact"},{"name":"five prime noncoding exon","type":"exact"}],"termid":"SO:0000445"}


id: PBO:0051528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2","termid":"PBO:0051528"}


id: PBO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 4","termid":"PBO:0071663"}


id: PBO:0079402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 6 class V","termid":"PBO:0079402"}


id: FYPO:0004410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tetraplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on tetraplatin","synonyms":[{"name":"normal cell population growth in presence of tetraplatin","type":"exact"},{"name":"normal cell population growth on tetraplatin","type":"exact"},{"name":"normal cellular response to tetraplatin","type":"related"},{"name":"normal vegetative cell population growth on tetraplatin","type":"exact"}],"termid":"FYPO:0004410"}


id: PBO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1 (predicted)","termid":"PBO:0004688"}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["RHEA:21444","EC:1.3.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["MetaCyc:COUMARATE-REDUCTASE-RXN","KEGG_REACTION:R03709"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: PBO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate 5-kinase (predicted)","termid":"PBO:0001295"}


id: PBO:0055725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 2","termid":"PBO:0055725"}


id: PBO:0090727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1","termid":"PBO:0090727"}


id: PATO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having two sides have the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isosceles triangular","termid":"PATO:0002307"}


id: GO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the breakdown of ethanolamine to form acetaldehyde and ammonia.","definition_xrefs":["PMID:1550360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase complex","termid":"GO:0009350"}


id: GO:0032878
data:
  {"annotated_genes":["SJAG_04980","SJAG_02760","SJAG_00028","SJAG_01319","SJAG_02536","SJAG_00317","SJAG_03581","SJAG_01794","SJAG_04509","SJAG_04461","SJAG_00596","SJAG_01799","SJAG_00333","SJAG_00845","SJAG_00661","SJAG_01376","SJAG_01373","SJAG_03637","SJAG_00236","SJAG_00610","SJAG_02022","SJAG_04666","SJAG_03126","SJAG_03048","SJAG_02392","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86628,89116,91457,95723,95917,102109,104812],"is_not":false,"summary":null,"term":"GO:0032878"},{"annotations":[86655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[99184,103036,107805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"},{"annotations":[103037,111840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[95698,100799,89373,99185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[107304,90205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000114"},{"annotations":[97885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000099"},{"annotations":[86827,91267,100012,108377,90206,113961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[83688,88075,98335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00236":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01319":null,"SJAG_01373":null,"SJAG_01376":null,"SJAG_01794":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02760":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment or maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032878","terms_by_termid":{"GO:0032878":null,"GO:0061173":null,"GO:1904846":null,"GO:2000099":null,"GO:2000100":null,"GO:2000114":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0090761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL family protein Orm1","termid":"PBO:0090761"}


id: PBO:0091581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Yip11/Gem2","termid":"PBO:0091581"}


id: GO:1901457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to acetate","termid":"GO:1901457"}


id: PATO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001136 ig e concentration (obsolete PATO:0001136)","termid":"PATO:0001136"}


id: GO:1905778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exonuclease activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:15200954","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclease activity","termid":"GO:0032074"},{"relation_name":"is_a","term_name":"regulation of exonuclease activity","termid":"GO:1905777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of exonuclease activity","synonyms":[{"name":"down regulation of exonuclease IX activity","type":"narrow"},{"name":"down regulation of exonuclease activity","type":"exact"},{"name":"down-regulation of exonuclease IX activity","type":"narrow"},{"name":"down-regulation of exonuclease activity","type":"exact"},{"name":"downregulation of exonuclease IX activity","type":"narrow"},{"name":"downregulation of exonuclease activity","type":"exact"},{"name":"inhibition of exonuclease IX activity","type":"narrow"},{"name":"inhibition of exonuclease activity","type":"narrow"},{"name":"negative regulation of exonuclease IX activity","type":"narrow"}],"termid":"GO:1905778"}


id: PBO:0041217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 5","termid":"PBO:0041217"}


id: GO:0060400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of growth hormone receptor signaling pathway","termid":"GO:0060398"},{"relation_name":"negatively_regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060400"}


id: PBO:0078263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-1","termid":"PBO:0078263"}


id: GO:0035183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous actin-rich layer of the insect ovarian ring canal that forms subcortically to the outer rim. The electron dense inner rim accumulates after the final mitotic division of each germline syncytia, and contains actin, a phosphotyrosine protein, and a number of cytoskeletal proteins.","definition_xrefs":["PMID:7925006","PMID:9093858","PMID:10556087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"female germline ring canal","termid":"GO:0035324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"female germline ring canal inner rim","synonyms":[{"name":"germline ring canal inner rim","type":"broad"},{"name":"nurse cell ring canal inner rim","type":"narrow"},{"name":"ovarian ring canal inner rim","type":"narrow"}],"termid":"GO:0035183"}


id: PBO:0069018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 262, pseudogene","termid":"PBO:0069018"}


id: GO:0086023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals beginning with a G protein-coupled adrenergic cell surface receptor combining with epinephrine or norepinephrine, to activate adenylate cyclase, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071880"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","synonyms":[{"name":"adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:0086023"}


id: PBO:0088378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40","termid":"PBO:0088378"}


id: PBO:0051504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKB interacting protein","termid":"PBO:0051504"}


id: MOD:01041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxycarbonyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxycarbonyl modified residue","synonyms":[{"name":"Z","type":"exact"}],"termid":"MOD:01041"}


id: MOD:01621
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues by forming an adduct with a compound containing a flavin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin crosslinked residues","termid":"MOD:01621"}


id: PBO:0042375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200R1L antisense RNA 1","termid":"PBO:0042375"}


id: PBO:0111067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cyp7, readthrough snd301","termid":"PBO:0111067"}


id: GO:0015453
data:
  {"annotated_genes":["SJAG_01355","SJAG_MIT04","SJAG_MIT03","SJAG_00601","SJAG_05629","SJAG_01490","SJAG_02646","SJAG_04152","SJAG_MIT13","SJAG_01077","SJAG_07006","SJAG_MIT20","SJAG_01190","SJAG_03337","SJAG_03490","SJAG_00976","SJAG_07007","SJAG_00755","SJAG_02504"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112068,109532,83977,114198,114219,114243,109950,110720,84968,87616,103695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[108183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[114222,99567,99970,103380,108721,113357,112906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Primary active transport of a solute across a membrane, driven by exothermic flow of electrons from a reduced substrate to an oxidized substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.","definition_xrefs":["TC:3.D.-.-.-","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"oxidoreduction-driven active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.D"],"synonyms":[{"name":"oxidoreduction-driven transporter","type":"exact"}],"termid":"GO:0015453","terms_by_termid":{"GO:0004129":null,"GO:0008121":null,"GO:0008137":null}}


id: RO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","definition_xrefs":["GOC:dos","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"RO:0002432"}


id: GO:1902081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:8349590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"negatively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"down regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"down-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"downregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"inhibition of calcium ion import into sarcoplasmic reticulum","type":"narrow"}],"termid":"GO:1902081"}


id: GO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cysteine catabolic process","secondary_identifiers":["Wikipedia:Cysteine"],"synonyms":[{"name":"cysteine breakdown","type":"exact"},{"name":"cysteine catabolism","type":"exact"},{"name":"cysteine degradation","type":"exact"}],"termid":"GO:0009093"}


id: FYPO:0005703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A  microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule polymerization during vegetative growth","termid":"FYPO:0007955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"decreased microtubule plus end growth rate","type":"exact"},{"name":"decreased microtubule polymerization rate","type":"exact"},{"name":"decreased rate of microtubule growth","type":"exact"},{"name":"decreased rate of microtubule polymerisation","type":"exact"},{"name":"decreased rate of microtubule polymerisation during vegetative growth","type":"exact"},{"name":"decreased rate of microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"reduced rate of microtubule polymerization","type":"exact"}],"termid":"FYPO:0005703"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: PBO:0067090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 126, pseudogene","termid":"PBO:0067090"}


id: GO:0097656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.","definition_xrefs":["PMID:21700835","GOC:pf","PMID:23910661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell self recognition","synonyms":[{"name":"kin discrimination","type":"related"},{"name":"kin recognition","type":"broad"},{"name":"self recognition","type":"broad"}],"termid":"GO:0097656"}


id: FYPO:0002551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show increased sensitivity to ultraviolet light during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV","termid":"FYPO:0002550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to UV during G0","synonyms":[{"name":"decreased cell population growth during cellular response to UV during G0","type":"exact"},{"name":"decreased growth during cellular response to UV during G0","type":"exact"},{"name":"hypersensitive to UV during G0","type":"exact"},{"name":"increased sensitivity to UV irradiation during G0","type":"exact"},{"name":"sensitive to UV during cell quiescence","type":"exact"},{"name":"sensitive to UV during quiescence","type":"exact"},{"name":"sensitive to ultraviolet light during G0","type":"exact"}],"termid":"FYPO:0002551"}


id: GO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric proximal tubule morphogenesis","termid":"GO:0072292"}


id: PBO:0003926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L2 (predicted)","termid":"PBO:0003926"}


id: PBO:0029968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_gamma_radiation","termid":"PBO:0029968"}


id: PBO:0079505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 3","termid":"PBO:0079505"}


id: PBO:0080662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 8","termid":"PBO:0080662"}


id: PBO:0039220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member E2","termid":"PBO:0039220"}


id: GO:0007207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by acetylcholine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by G-protein coupled acetylcholine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by muscarinic acetylcholine receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by muscarinic acetylcholine receptor signalling pathway","type":"exact"},{"name":"muscarinic acetylcholine receptor, phospholipase C activating pathway","type":"related"},{"name":"muscarinic receptor signaling pathway via activation of PLC","type":"exact"},{"name":"phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway","type":"exact"}],"termid":"GO:0007207"}


id: GO:1905550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22768340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"regulation of protein localization in ER","type":"exact"},{"name":"regulation of protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:1905550"}


id: PBO:0060603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit H","termid":"PBO:0060603"}


id: GO:0015741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fumarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fumarate transport","termid":"GO:0015741"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_04853","SJAG_00666","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95658,97783],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[90761],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: PBO:0059031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP20 antisense RNA 1","termid":"PBO:0059031"}


id: PBO:0082146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the absence of oxygen; ARE1 has a paralog, ARE2, that arose from the whole genome duplication","termid":"PBO:0082146"}


id: GO:0070974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a POU domain of a protein. The POU domain is a bipartite DNA binding domain composed of two subunits separated by a non-conserved region of 15-55 amino acids; it is found in several eukaryotic transcription factors.","definition_xrefs":["GOC:yaf","GOC:mah","InterPro:IPR000327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"POU domain binding","termid":"GO:0070974"}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["PubMed:11344537","PubMed:11857757","PubMed:15189151","PubMed:12175151","Unimod:65#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: PBO:0090746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Esf2","termid":"PBO:0090746"}


id: PBO:0075435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member D","termid":"PBO:0075435"}


id: GO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment.","definition_xrefs":["GOC:jl","PMID:11752666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"part_of","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular accumulation of glycerol","termid":"GO:0006973"}


id: FYPO:0000459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abnormal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"abnormal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"abnormal centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"abnormal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0000459"}


id: GO:0045840
data:
  {"annotated_genes":["SJAG_02336","SJAG_04573","SJAG_01679","SJAG_00666","SJAG_02498","SJAG_03048","SJAG_01805","SJAG_03681","SJAG_04259","SJAG_00883","SJAG_04968","SJAG_03126","SJAG_01297","SJAG_02451","SJAG_02169","SJAG_03353","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103665,107300,95115,99382,109573,86428,111166,109099,102656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[93271,97877,97608,106719,95659,110062,89442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"positive regulation of nuclear division","termid":"GO:0051785"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitosis","type":"narrow"},{"name":"mitogenic activity","type":"narrow"},{"name":"positive regulation of mitosis","type":"exact"},{"name":"stimulation of mitosis","type":"narrow"},{"name":"up regulation of mitosis","type":"exact"},{"name":"up-regulation of mitosis","type":"exact"},{"name":"upregulation of mitosis","type":"exact"}],"termid":"GO:0045840","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 2","termid":"PBO:0052046"}


id: GO:0047056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + [reduced NADPH--hemoprotein reductase] + O2 -> (S)-canadine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:21456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(S)-canadine synthase activity","secondary_identifiers":["KEGG_REACTION:R04400","MetaCyc:1.1.3.36-RXN","EC:1.14.19.68"],"synonyms":[{"name":"(S)-tetrahydroberberine synthase activity","type":"related"},{"name":"(S)-tetrahydrocolumbamine oxidase (methylenedioxy-bridge-forming) activity","type":"related"}],"termid":"GO:0047056"}


id: PBO:0083436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YNL108C","termid":"PBO:0083436"}


id: GO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fusion of the synaptic vesicle with the postsynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fusion (obsolete GO:0016083)","synonyms":[{"name":"synaptic vesicle fusion","type":"exact"}],"termid":"GO:0016083"}


id: PBO:0029025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_gamma-tubulin_complex_assembly","termid":"PBO:0029025"}


id: GO:1905841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxidopamine stimulus.","definition_xrefs":["PMID:23721876","GOC:rz","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to catecholamine","termid":"GO:0071869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidopamine","termid":"GO:1905841"}


id: PBO:0076609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 27, pseudogene","termid":"PBO:0076609"}


id: GO:0048923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast hair cell. (N.B. This may be development of neuromast hair cell type or a set of cell of neuromast hair cell type. This will involve the change of a cell or set of cells from one cell identity to another). Hair cells are the sensory receptors of the neuromast and are located in a portion of the neuromast called the sensory strip. Each hair cell of the neuromast is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. There are approximately seven hair cells within each neuromast, with each hair cell innervated by afferent and efferent neurons.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell differentiation","termid":"GO:0048923"}


id: GO:0150053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a climbing fiber onto the dendrites of a Purkinje cell in cerebellum. The climbing fiber originates from the inferior olivary nucleus of the medulla oblongata.","definition_xrefs":["PMID:23811844","GOC:bc","PMID:5044254","PMID:19597563","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar climbing fiber to Purkinje cell synapse","synonyms":[{"name":"cerebellar climbing fibre to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150053"}


id: GO:0033757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + acceptor = 3-dehydro-alpha-D-glucosyl-beta-D-fructofuranoside + reduced acceptor.","definition_xrefs":["EC:1.1.99.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glucoside 3-dehydrogenase activity","secondary_identifiers":["MetaCyc:GLUCOSIDE-3-DEHYDROGENASE-RXN","RHEA:16589","Wikipedia:Glucoside_3-dehydrogenase"],"synonyms":[{"name":"D-aldohexopyranoside dehydrogenase","type":"related"},{"name":"D-aldohexoside:(acceptor) 3-oxidoreductase","type":"related"},{"name":"D-aldohexoside:acceptor 3-oxidoreductase","type":"related"},{"name":"D-aldohexoside:cytochrome c oxidoreductase","type":"related"},{"name":"hexopyranoside-cytochrome c oxidoreductase","type":"related"}],"termid":"GO:0033757"}


id: GO:0052933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome cL] + a primary alcohol = 2 [Fe(II)cytochrome cL] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c(L)) activity","secondary_identifiers":["KEGG_REACTION:R09128","GO:0052930","GO:0052932","EC:1.1.2.7","KEGG_REACTION:R01146","GO:0052931","MetaCyc:RXN-11332","KEGG_REACTION:R09127","MetaCyc:RXN-2861"],"synonyms":[{"name":"2-chloroethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"alcohol:cytochrome c(L) oxidoreductase activity","type":"exact"},{"name":"ethanol cytochrome-c oxidoreductase activity","type":"narrow"},{"name":"methanol dehydrogenase activity","type":"narrow"},{"name":"methanol ferricytochrome-c oxidoreductase activity","type":"narrow"}],"termid":"GO:0052933"}


id: GO:0140837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphoserine (position 7).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0140096","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S7 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S7 kinase activity","type":"exact"}],"termid":"GO:0140837"}


id: GO:0004060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine.","definition_xrefs":["EC:2.3.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"arylamine N-acetyltransferase activity","secondary_identifiers":["Reactome:R-HSA-174967","Reactome:R-HSA-9753676","UM-BBD_enzymeID:e0341","MetaCyc:ARYLAMINE-N-ACETYLTRANSFERASE-RXN","RHEA:16613","Reactome:R-HSA-174963"],"synonyms":[{"name":"2-naphthylamine N-acetyltransferase activity","type":"related"},{"name":"4-aminobiphenyl N-acetyltransferase activity","type":"related"},{"name":"acetyl CoA-arylamine N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:arylamine N-acetyltransferase activity","type":"related"},{"name":"arylamine acetylase activity","type":"related"},{"name":"arylamine acetyltransferase activity","type":"related"},{"name":"beta-naphthylamine N-acetyltransferase activity","type":"related"},{"name":"indoleamine N-acetyltransferase activity","type":"related"},{"name":"p-aminosalicylate N-acetyltransferase activity","type":"related"}],"termid":"GO:0004060"}


id: PBO:0109433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair protein","termid":"PBO:0109433"}


id: GO:0016014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex.","definition_xrefs":["PMID:15117830","PMID:16710609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"dystrophin-associated glycoprotein complex","termid":"GO:0016010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"dystrobrevin complex","termid":"GO:0016014"}


id: PR:O13602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.04c","synonyms":[{"name":"Spom972h-mrps28","type":"exact"}],"termid":"PR:O13602"}


id: GO:1904727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF_miRNA","PMID:23496142","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"negatively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of replicative senescence","synonyms":[{"name":"down regulation of replicative senescence","type":"exact"},{"name":"down-regulation of replicative senescence","type":"exact"},{"name":"downregulation of replicative senescence","type":"exact"},{"name":"inhibition of replicative senescence","type":"narrow"}],"termid":"GO:1904727"}


id: GO:0033300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of dehydroascorbate, 5-(1,2-dihydroxyethyl)furan-2,3,4(5H)-trione, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"dehydroascorbic acid transmembrane transporter activity","secondary_identifiers":["RHEA:60380","Reactome:R-HSA-198818"],"synonyms":[{"name":"dehydroascorbate transporter activity","type":"exact"},{"name":"dehydroascorbic acid transporter activity","type":"related"}],"termid":"GO:0033300"}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of host anion transport","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: PBO:0011970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family protein kinase Pom2","termid":"PBO:0011970"}


id: PBO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolar satellite-associated tubulin polyglutamylase complex regulator 1","termid":"PBO:0044081"}


id: GO:0031901
data:
  {"annotated_genes":["SJAG_01112"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91493],"is_not":false,"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01112":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"early endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031901","terms_by_termid":{"GO:0031901":null}}


id: PBO:0041389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 52","termid":"PBO:0041389"}


id: PBO:0048072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 23","termid":"PBO:0048072"}


id: GO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity secondary active nitrite transmembrane transporter activity","termid":"GO:0015513"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nitrate efflux transmembrane transporter activity","termid":"GO:0010542"}


id: GO:1990567
data:
  {"annotated_genes":["SJAG_01599","SJAG_03500","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95821,107293,113408],"is_not":false,"summary":null,"term":"GO:1990567"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that in S. pombe consists of the proteins Dis2, Ppn1, and Swd22.","definition_xrefs":["PMID:24945319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_03126":null,"SJAG_03500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DPS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990567","terms_by_termid":{"GO:1990567":null}}


id: FYPO:0000007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitotic cell cycle checkpoint phenotype in which the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is abnormal. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"abnormal S-phase DNA damage checkpoint","secondary_identifiers":["FYPO:0000195"],"synonyms":[{"name":"DNA damage checkpoint defects, S-phase","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint activation","type":"related"},{"name":"abnormal S-phase DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal intra-S DNA damage checkpoint","type":"exact"},{"name":"abnormal mitotic S-phase DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0000007"}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: FYPO:0006586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abolished, and the protein is instead detected distributed over a greater area of the plasma membrane than normal.","definition_xrefs":["PomBase:mah","PMID:29134248"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein abnormally dispersed at shmoo tip","termid":"FYPO:0006386"},{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip membrane, with protein distributed in plasma membrane","synonyms":[{"name":"abolished protein localisation to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to plasma membrane at shmoo tip, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to shmoo membrane fusion domain, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to shmoo projection membrane, with protein distributed in plasma membrane","type":"related"},{"name":"protein localization to shmoo tip membrane abolished, with protein distributed in plasma membrane","type":"related"}],"termid":"FYPO:0006586"}


id: PBO:0084426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major of three pyruvate decarboxylase isozymes; key enzyme in alcoholic fermentation; decarboxylates pyruvate to acetaldehyde; involved in amino acid catabolism; subject to glucose-, ethanol-, and autoregulation; activated by phosphorylation in response to glucose levels; N-terminally propionylated in vivo","termid":"PBO:0084426"}


id: PATO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality of being covered with short hairs or soft down.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent hair","termid":"PATO:0001320"}


id: GO:0033883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate.","definition_xrefs":["EC:3.1.3.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"pyridoxal phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.74-RXN","RHEA:20533"],"synonyms":[{"name":"PLP phosphatase activity","type":"related"},{"name":"PNP phosphatase activity","type":"related"},{"name":"pyridoxal-5'-phosphate phosphohydrolase activity","type":"related"},{"name":"vitamin B6 (pyridoxine) phosphatase activity","type":"broad"},{"name":"vitamin B6-phosphate phosphatase activity","type":"broad"}],"termid":"GO:0033883"}


id: FYPO:0004483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion is abnormal during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole fusion during vegetative growth","termid":"FYPO:0004482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal vacuole fusion during cellular hypotonic response","synonyms":[{"name":"abnormal homotypic vacuole fusion during cellular hypotonic response","type":"exact"},{"name":"abnormal vacuole fusion during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fusion during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"abnormal vacuole fusion during hypotonic stress","type":"exact"},{"name":"abnormal vacuole fusion, non-autophagic, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0004483"}


id: PBO:0048860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 5","termid":"PBO:0048860"}


id: GO:0021535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in hindbrain","termid":"GO:0021535"}


id: GO:0031668
data:
  {"annotated_genes":["SJAG_04032","SJAG_02699","SJAG_00256","SJAG_03048","SJAG_04873","SJAG_00169","SJAG_00209","SJAG_00534","SJAG_01162","SJAG_02026","SJAG_01970","SJAG_00380","SJAG_03256","SJAG_04743","SJAG_03486","SJAG_04067","SJAG_03519","SJAG_03309","SJAG_02973","SJAG_04031","SJAG_04725","SJAG_02380","SJAG_01509","SJAG_00233","SJAG_00781","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90295,71588,90823,75085,105054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[95960,75184,75340,111742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[99272,89739,89731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[100666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[108657,103001,108658,71816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[77270,76109,90249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[110844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[98291,99323],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[83641,96904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[97884],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"response to extracellular stimulus","termid":"GO:0009991"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"is_a","term_name":"cellular response to external stimulus","termid":"GO:0071496"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_01162":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02699":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to extracellular stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031668","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0036245":null,"GO:0042149":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: GO:1901602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dethiobiotin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dethiobiotin binding","termid":"GO:1901602"}


id: PR:Q9US26
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.03","synonyms":[{"name":"Spom972h-fta2","type":"exact"},{"name":"sim4 complex subunit fta2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US26"}


id: GO:0031128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process involving two tissues in which one tissue (the inducer) produces a signal that directs cell fate commitment of cells in the second tissue (the responder).","definition_xrefs":["GOC:dph","GOC:mah","PMID:24503535","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental induction","termid":"GO:0031128"}


id: PBO:0062572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily C member 1","termid":"PBO:0062572"}


id: PBO:0059842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 2","termid":"PBO:0059842"}


id: GO:0140543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of piRNA transcription","termid":"GO:0140542"},{"relation_name":"positively_regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"positive regulation of piRNA transcription","termid":"GO:0140543"}


id: GO:0004602
data:
  {"annotated_genes":["SJAG_04632","SJAG_05181","SJAG_01292","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58661,85146,93525,94827],"is_not":false,"summary":null,"term":"GO:0004602"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + hydrogen peroxide = oxidized glutathione + 2 H2O.","definition_xrefs":["EC:1.11.1.9","PMID:36771108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01216":null,"SJAG_01292":null,"SJAG_04632":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutathione peroxidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2161999","Reactome:R-HSA-3343700","Reactome:R-HSA-6799695","Reactome:R-HSA-71676","MetaCyc:GLUTATHIONE-PEROXIDASE-RXN","Reactome:R-HSA-3341397","RHEA:16833","Reactome:R-HSA-2161946","Reactome:R-HSA-2161959","GO:0016224","Reactome:R-HSA-2161791","Reactome:R-HSA-3323013","Reactome:R-HSA-3341277"],"synonyms":[{"name":"GSH peroxidase activity","type":"related"},{"name":"glutathione:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"reduced glutathione peroxidase activity","type":"related"},{"name":"selenium-glutathione peroxidase activity","type":"related"}],"termid":"GO:0004602","terms_by_termid":{"GO:0004602":null}}


id: GO:0019372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which an unsaturated fatty acid (such as arachidonic acid or linolenic acid) is converted to other compounds, and in which the first step is hydroperoxide formation catalyzed by lipoxygenase.","definition_xrefs":["PMID:17163881","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lipoxygenase pathway","termid":"GO:0019372"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PBO:0086576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0086576"}


id: GO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["GOC:ai","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell differentiation","termid":"GO:0051147"}


id: PBO:0073441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratifin","termid":"PBO:0073441"}


id: GO:0033839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"flavonol-3-O-glycoside glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.240-RXN","RHEA:23544"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 2'''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033839"}


id: GO:0043307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil activation","termid":"GO:0043307"}


id: PBO:0079745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial cancer associated 1","termid":"PBO:0079745"}


id: GO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["GOC:dph","PMID:14602517","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: GO:0075020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont calcium or calmodulin-mediated signal transduction during appressorium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium or calmodulin-mediated activation of appressorium formation (obsolete GO:0075020)","synonyms":[{"name":"Ca++ or calmodulin-mediated activation of appressorium formation","type":"exact"},{"name":"Ca2+ or calmodulin-mediated activation of appressorium formation","type":"exact"}],"termid":"GO:0075020"}


id: PBO:0034451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034451"}


id: MOD:02074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}


id: PBO:0074032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 19","termid":"PBO:0074032"}


id: GO:0141006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which a piRNA triggers heterochromatin assembly. Heterochromatin is a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32381626","PMID:32674113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated heterochromatin formation","termid":"GO:0140966"},{"relation_name":"is_a","term_name":"retrotransposon silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"piRNA-mediated retrotransposon silencing by heterochromatin formation","termid":"GO:0141006"}


id: GO:1903193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquarterpene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:21627333","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"sesquarterpene metabolic process","termid":"GO:1903192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquarterpene biosynthetic process","synonyms":[{"name":"sesquarterpene anabolism","type":"exact"},{"name":"sesquarterpene biosynthesis","type":"exact"},{"name":"sesquarterpene formation","type":"exact"},{"name":"sesquarterpene synthesis","type":"exact"}],"termid":"GO:1903193"}


id: GO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a dendritic cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"},{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"dendritic cell cytokine production","termid":"GO:0002371"}


id: PBO:0058396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4768","termid":"PBO:0058396"}


id: GO:0032637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-8 production","secondary_identifiers":["GO:0042228","GO:0072606"],"synonyms":[{"name":"IL-8 production","type":"exact"},{"name":"interleukin-8 biosynthetic process","type":"narrow"},{"name":"interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032637"}


id: GO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the rate of movement depends on the intensity (rather than the direction) of the stimulus.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinesis","secondary_identifiers":["Wikipedia:Kinesis"],"termid":"GO:0042465"}


id: PBO:0065915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 1","termid":"PBO:0065915"}


id: PBO:0066305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region","termid":"PBO:0066305"}


id: PBO:0029937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_elongated_germ_tubes_and_elongated_cells_(obsolete_FYPO:0002300)","termid":"PBO:0029937"}


id: PBO:0039314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 8, tRNA methyltransferase","termid":"PBO:0039314"}


id: PBO:0060912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEXN antisense RNA 1","termid":"PBO:0060912"}


id: RO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has intermediate c if and only if p has parts p1, p2 and p1 has output c, and p2 has input c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intermediate","termid":"RO:0002505"}


id: FYPO:0001045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"},{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased acid phosphatase activity","synonyms":[{"name":"reduced acid phosphatase activity","type":"exact"}],"termid":"FYPO:0001045"}


id: FYPO:0001327
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114523,114524,114525],"is_not":false,"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during vegetative growth","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000762"],"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation during vegetative growth","type":"related"},{"name":"increased protein level during mitotic cell cycle","type":"related"},{"name":"protein accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001327","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0059553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Thr (ACN)","termid":"PBO:0059553"}


id: PBO:0060788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit C2","termid":"PBO:0060788"}


id: SO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinuous stretch of DNA that is the combination of one or several TFRSs whose bound TFs work jointly in the regulation of a promoter. ","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_module","synonyms":[{"name":"TFRS module","type":"exact"},{"name":"TFRS phrase","type":"exact"},{"name":"transcription factor regulatory site module","type":"exact"},{"name":"transcription factor regulatory site phrase","type":"exact"}],"termid":"SO:0002296"}


id: GO:0140850
data:
  {"annotated_genes":["SJAG_02319","SJAG_03006"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111482,114016],"is_not":false,"summary":null,"term":"GO:0140850"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to a histone 2B at the conserved C-terminal lysine (K) residue. The last K residue is at position 119 in fission yeast, 123 in budding yeast, and 120 in mammals.","definition_xrefs":["PMID:28624371","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B ubiquitin ligase activity","termid":"GO:0141054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0003674","GO:0004842","GO:0016740","GO:0016746","GO:0140096","GO:0003824","GO:0019787"],"is_obsolete":false,"name":"histone H2B C-terminal K residue ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2B conserved C-terminal lysine ubiquitin ligase activity","type":"exact"},{"name":"histone H2B-K120 ubiquitin ligase activity","type":"exact"},{"name":"histone H2BK120 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2B-K120 specific)","type":"exact"}],"termid":"GO:0140850","terms_by_termid":{"GO:0140850":null}}


id: PBO:0067324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 415, pseudogene","termid":"PBO:0067324"}


id: RO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Candidate definition: x developmentally related to y if and only if there exists some developmental process (GO:0032502) p such that x and y both participates in p, and x is the output of p and y is the input of p","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_related_to","termid":"RO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_preceded_by","termid":"RO:0002258"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: GO:0031733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR8 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CCR8 chemokine receptor binding","synonyms":[{"name":"CCR8 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031733"}


id: GO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The reduction of the ascorbate free radical to a stable form.","definition_xrefs":["GOC:ai","GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate stabilization (obsolete GO:0000044)","synonyms":[{"name":"ascorbate stabilization","type":"exact"},{"name":"vitamin C stabilization","type":"exact"}],"termid":"GO:0000044"}


id: GO:0000705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The first division of meiosis in which homologous chromosomes are paired and segregated from each other, occurring in the constitutive absence of chiasmata.","definition_xrefs":["PMID:10690419","GOC:elh","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"achiasmate meiosis I","synonyms":[{"name":"achiasmate meiosis I nuclear division","type":"exact"}],"termid":"GO:0000705"}


id: PBO:0068600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 51, pseudogene","termid":"PBO:0068600"}


id: PBO:0066109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 1","termid":"PBO:0066109"}


id: PBO:0058304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4678","termid":"PBO:0058304"}


id: GO:1903219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:12398416","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","termid":"GO:1903218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","synonyms":[{"name":"down regulation of 'malic' enzyme","type":"related"},{"name":"down regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"down regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"down regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"down regulation of NADP-malic enzyme activity","type":"exact"},{"name":"down regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"down regulation of NADP-specific malic enzyme","type":"related"},{"name":"down regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"down regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"down regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"down-regulation of 'malic' enzyme","type":"related"},{"name":"down-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"down-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"down-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"down-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"down-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"down-regulation of NADP-specific malic enzyme","type":"related"},{"name":"down-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"down-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"down-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"downregulation of 'malic' enzyme","type":"related"},{"name":"downregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"downregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"downregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"downregulation of NADP-malic enzyme activity","type":"exact"},{"name":"downregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"downregulation of NADP-specific malic enzyme","type":"related"},{"name":"downregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"downregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"downregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"inhibition of 'malic' enzyme","type":"related"},{"name":"inhibition of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"inhibition of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"inhibition of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"inhibition of NADP-malic enzyme activity","type":"narrow"},{"name":"inhibition of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"inhibition of NADP-specific malic enzyme","type":"related"},{"name":"inhibition of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"inhibition of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"inhibition of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"negative regulation of 'malic' enzyme","type":"related"},{"name":"negative regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"negative regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"negative regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"negative regulation of NADP-malic enzyme activity","type":"exact"},{"name":"negative regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"negative regulation of NADP-specific malic enzyme","type":"related"},{"name":"negative regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"negative regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903219"}


id: PBO:0003642
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds FLEX 5'-GTAAAYA-3'","termid":"PBO:0003642"}


id: PBO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR48 family Bun107","termid":"PBO:0000346"}


id: FYPO:0005748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein export from nucleus during glucose starvation","synonyms":[{"name":"normal protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"normal protein export from nucleus during glucose depletion","type":"exact"},{"name":"normal protein export from nucleus during glucose deprivation","type":"exact"},{"name":"normal protein export from nucleus during glucose limitation","type":"related"}],"termid":"FYPO:0005748"}


id: PBO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein (predicted)","termid":"PBO:0003932"}


id: GO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear receptor protein. Nuclear receptor proteins are DNA-binding transcription factors which are regulated by binding to a ligand.","definition_xrefs":["PMID:7776974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear receptor binding","secondary_identifiers":["GO:0035258","GO:0035257"],"synonyms":[{"name":"ligand-dependent nuclear receptor binding","type":"exact"},{"name":"ligand-dependent nuclear receptor interactor activity","type":"related"},{"name":"nuclear hormone receptor binding","type":"exact"},{"name":"steroid hormone receptor binding","type":"broad"}],"termid":"GO:0016922"}


id: PR:P78875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpp1 gene.","definition_xrefs":["UniProtKB:P78875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.15c","synonyms":[{"name":"SPAC19G12.15c","type":"related"},{"name":"Spom972h-tpp1","type":"exact"},{"name":"TPP tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78875"}


id: PBO:0081262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 32","termid":"PBO:0081262"}


id: PBO:0083594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR070C has a paralog, YHR214C-B, that arose from a segmental duplication","termid":"PBO:0083594"}


id: GO:0004619
data:
  {"annotated_genes":["SJAG_02009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046538"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate.","definition_xrefs":["RHEA:15901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate mutase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71445","Reactome:R-HSA-71654"],"synonyms":[{"name":"D-phosphoglycerate 2,3-phosphomutase activity","type":"related"},{"name":"PGA mutase activity","type":"related"},{"name":"PGAM activity","type":"related"},{"name":"PGM","type":"exact"},{"name":"phosphoglycerate phosphomutase activity","type":"related"},{"name":"phosphoglyceromutase activity","type":"related"}],"termid":"GO:0004619","terms_by_termid":{"GO:0046538":null}}


id: GO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.","definition_xrefs":["ISBN:0198506732","PMID:26820516","GOC:mah","GOC:aruk","GOC:bc","PMID:28096264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell junction","secondary_identifiers":["Wikipedia:Cell_junction"],"termid":"GO:0030054"}


id: GO:0016002
data:
  {"annotated_genes":["SJAG_05027","SJAG_01693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83565,77107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + acceptor + 3 H2O = sulfite + reduced acceptor.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01693":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"assimilatory sulfite reductase activity","type":"exact"},{"name":"assimilatory-type sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:(acceptor) oxidoreductase activity","type":"exact"},{"name":"hydrogen-sulfide:acceptor oxidoreductase activity","type":"exact"},{"name":"sulphite reductase activity","type":"exact"}],"termid":"GO:0016002","terms_by_termid":{"GO:0004783":null}}


id: GO:0102692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + N-benzyladenine = H+ + N-benzyl-9-(alpha-D-glucosyl)adenine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"benzyladenine UDP glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4730"],"termid":"GO:0102692"}


id: PBO:0082006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 2","termid":"PBO:0082006"}


id: _global:disposition_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has disposition","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disposition_of","secondary_identifiers":["RO:0000092"],"termid":"_global:disposition_of"}


id: GO:0042193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylmercury (MeHg+), a highly toxic organometal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmercury metabolic process","termid":"GO:0042191"},{"relation_name":"is_a","term_name":"organomercury catabolic process","termid":"GO:0046413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"methylmercury catabolic process","synonyms":[{"name":"methylmercury breakdown","type":"exact"},{"name":"methylmercury catabolism","type":"exact"},{"name":"methylmercury degradation","type":"exact"}],"termid":"GO:0042193"}


id: PBO:0071079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 81","termid":"PBO:0071079"}


id: PBO:0085807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; ECM18 has a paralog, ICT1, that arose from the whole genome duplication","termid":"PBO:0085807"}


id: PBO:0049392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 6 (putative)","termid":"PBO:0049392"}


id: PR:Q10198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein NDC80 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03670","PANTHER:PTHR10643:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein ndc80 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.03","secondary_identifiers":["UniProtKB:Q10198"],"synonyms":[{"name":"NMS complex subunit ndc80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDC80","type":"exact"}],"termid":"PR:Q10198"}


id: PR:Q10234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.17c","synonyms":[{"name":"Spom972h-mrp5","type":"exact"}],"termid":"PR:Q10234"}


id: GO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle endowment","termid":"GO:0001551"}


id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02144","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: GO:0045951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic recombination","synonyms":[{"name":"activation of mitotic recombination","type":"narrow"},{"name":"positive regulation of recombination within rDNA repeats","type":"narrow"},{"name":"stimulation of mitotic recombination","type":"narrow"},{"name":"up regulation of mitotic recombination","type":"exact"},{"name":"up-regulation of mitotic recombination","type":"exact"},{"name":"upregulation of mitotic recombination","type":"exact"}],"termid":"GO:0045951"}


id: GO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of the chromophore S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine (obsolete GO:0018097)","synonyms":[{"name":"protein amino acid cinnamylation","type":"broad"}],"termid":"GO:0018097"}


id: PBO:0108899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 12","termid":"PBO:0108899"}


id: GO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables the transport of a solute across a membrane via a gap junction hemi-channel. Two gap junction hemi-channels coupled together form a complete gap junction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wide pore channel activity","termid":"GO:0022829"},{"relation_name":"part_of","term_name":"gap junction channel activity","termid":"GO:0005243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"part_of","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"part_of","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gap junction hemi-channel activity","synonyms":[{"name":"connexon channel activity","type":"exact"}],"termid":"GO:0055077"}


id: PBO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ApsixA hydrolase","termid":"PBO:0012544"}


id: GO:0097128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK4 complex","termid":"GO:0097128"}


id: PBO:0090114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase Inp53","termid":"PBO:0090114"}


id: SO:0000495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 12 or 23 nucleotide spacer between the 3'D-HEPTAMER and 3'D-NONAMER of a 3'D-RS.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_spacer","termid":"SO:0000563"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_spacer","synonyms":[{"name":"3'D-SPACER","type":"exact"},{"name":"three prime D spacer","type":"exact"}],"termid":"SO:0000495"}


id: PATO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001181 absolute response (obsolete PATO:0001181)","termid":"PATO:0001181"}


id: PBO:0046318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1","termid":"PBO:0046318"}


id: PR:Q9P7J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ada2 gene.","definition_xrefs":["UniProtKB:Q9P7J7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adapter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.08c","synonyms":[{"name":"Spom972h-ada2","type":"exact"}],"termid":"PR:Q9P7J7"}


id: GO:0031939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing at telomere (obsolete GO:0031939)","synonyms":[{"name":"down regulation of chromatin silencing at telomere","type":"exact"},{"name":"down-regulation of chromatin silencing at telomere","type":"exact"},{"name":"downregulation of chromatin silencing at telomere","type":"exact"},{"name":"inhibition of chromatin silencing at telomere","type":"narrow"},{"name":"negative regulation of heterochromatic silencing at telomere","type":"exact"}],"termid":"GO:0031939"}


id: GO:0009477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome c that is an integral component of the mitochondrial respiratory complex III. Functions as an electron donor to cytochrome c.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c1 (obsolete GO:0009477)","synonyms":[{"name":"cytochrome c1","type":"exact"}],"termid":"GO:0009477"}


id: PBO:0047509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 1","termid":"PBO:0047509"}


id: FYPO:0004909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed, and the protein is instead distributed throughout the nucleus.","definition_xrefs":["PMID:8937982","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus","synonyms":[{"name":"abolished punctate nuclear protein localization, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localisation, with protein distributed in nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein dispersed through nucleus","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization, with protein distributed in nucleus, during vegetative growth","type":"exact"},{"name":"loss of punctate nuclear protein localization, with protein distributed throughout nucleus","type":"exact"}],"termid":"FYPO:0004909"}


id: PBO:0083588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YGR051C is not an essential gene","termid":"PBO:0083588"}


id: GO:0032218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of riboflavin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Riboflavin (vitamin B2) is a water-soluble B-complex vitamin, converted in the cell to FMN and FAD, cofactors required for the function of flavoproteins.","definition_xrefs":["PMID:16204239","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"riboflavin transport","termid":"GO:0032218"}


id: PBO:0047087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member F, pseudogene","termid":"PBO:0047087"}


id: GO:0019243
data:
  {"annotated_genes":["SJAG_04674","SJAG_04726","SJAG_01596","SJAG_02988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72420,73954,95846,98284],"is_not":false,"summary":null,"term":"GO:0019243"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step.","definition_xrefs":["GOC:ai","PMID:2198020","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02988":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5386"],"synonyms":[{"name":"D-lactate biosynthesis from methylglyoxal","type":"broad"},{"name":"D-lactate biosynthetic process from methylglyoxal","type":"broad"},{"name":"glyoxalase system","type":"related"},{"name":"methylglyoxal breakdown to D-lactate","type":"broad"},{"name":"methylglyoxal catabolism to D-lactate via S-lactoyl-glutathione","type":"exact"},{"name":"methylglyoxal degradation to D-lactate","type":"broad"},{"name":"methylglyoxal detoxification","type":"related"}],"termid":"GO:0019243","terms_by_termid":{"GO:0019243":null}}


id: MOD:00096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamic acid 1-amide.","definition_xrefs":["RESID:AA0087","PubMed:14550575","PubMed:1093875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-pentanediamic acid","type":"exact"},{"name":"1-amidated L-glutamic acid","type":"exact"},{"name":"4,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"GluN","type":"exact"},{"name":"L-glutamic acid 1-amide","type":"exact"},{"name":"MOD_RES Glutamic acid 1-amide","type":"exact"},{"name":"isoglutamine","type":"exact"}],"termid":"MOD:00096"}


id: GO:0003866
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72153],"is_not":false,"summary":null,"term":"GO:0003866"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphoshikimate + phosphoenolpyruvate = 5-O-(1-carboxyvinyl)-3-phosphoshikimate + phosphate.","definition_xrefs":["EC:2.5.1.19","RHEA:21256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"3-phosphoshikimate 1-carboxyvinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.5.1.19-RXN","KEGG_REACTION:R03460"],"synonyms":[{"name":"3-enol-pyruvoylshikimate-5-phosphate synthase activity","type":"related"},{"name":"5-enolpyruvylshikimate-3-phosphate synthase activity","type":"related"},{"name":"EPSP synthase activity","type":"related"},{"name":"phosphoenolpyruvate:3-phosphoshikimate 5-O-(1-carboxyvinyl)-transferase activity","type":"related"}],"termid":"GO:0003866","terms_by_termid":{"GO:0003866":null}}


id: FYPO:0003489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003489"}


id: PBO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 5","termid":"PBO:0046765"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: GO:0030308
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell growth","type":"exact"},{"name":"down-regulation of cell growth","type":"exact"},{"name":"downregulation of cell growth","type":"exact"},{"name":"inhibition of cell growth","type":"narrow"}],"termid":"GO:0030308","terms_by_termid":{"GO:0051517":null}}


id: PBO:0070860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 13","termid":"PBO:0070860"}


id: GO:1904925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagy of the mitochondrion in response to mitochondrial depolarization.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:TermGenie","PMID:22020285","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion in response to mitochondrial depolarization","termid":"GO:1904923"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914","GO:0007005"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization","synonyms":[{"name":"activation of mitophagy in response to mitochondrial depolarization","type":"narrow"},{"name":"up regulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"up-regulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"upregulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1904925"}


id: GO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.144-RXN","Reactome:R-HSA-975926","RHEA:15509"],"synonyms":[{"name":"GnTIII activity","type":"related"},{"name":"N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:beta-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase III activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase III","type":"related"}],"termid":"GO:0003830"}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: FYPO:0007169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation that takes place as part of mitotic spindle assembly, and which normally results in a parallel arrangement of microtubules, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:18061564","PomBase:mah","GO:0001578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization phenotype","termid":"FYPO:0000297"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal microtubule bundle formation during mitotic spindle assembly","synonyms":[{"name":"normal microtubule array formation during mitotic spindle assembly","type":"related"},{"name":"normal microtubule bundle formation in spindle during mitotic prophase","type":"related"},{"name":"normal microtubule bundle formation involved in mitotic spindle assembly","type":"exact"},{"name":"normal mitotic spindle microtubule bundling during prophase","type":"exact"},{"name":"normal mitotic spindle microtubule bundling during spindle assembly","type":"related"}],"termid":"FYPO:0007169"}


id: GO:0140735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lovastatin (also known as mevinolin, mevacor or monacolin K), a hypolipidemic inhibitor of (3S)-hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR).","definition_xrefs":["PMID:10381407","PMID:10334994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lovastatin biosynthetic process","secondary_identifiers":["kegg.module:M00893","MetaCyc:PWY-7535"],"synonyms":[{"name":"lovastatin anabolism","type":"exact"},{"name":"lovastatin biosynthesis","type":"exact"},{"name":"lovastatin formation","type":"exact"},{"name":"lovastatin synthesis","type":"exact"},{"name":"mevacor anabolism","type":"exact"},{"name":"mevacor biosynthesis","type":"exact"},{"name":"mevacor biosynthetic process","type":"exact"},{"name":"mevacor formation","type":"exact"},{"name":"mevacor synthesis","type":"exact"},{"name":"mevinolin anabolism","type":"exact"},{"name":"mevinolin biosynthesis","type":"exact"},{"name":"mevinolin biosynthetic process","type":"exact"},{"name":"mevinolin formation,","type":"exact"},{"name":"mevinolin synthesis","type":"exact"},{"name":"monacolin K anabolism","type":"exact"},{"name":"monacolin K biosynthesis","type":"exact"},{"name":"monacolin K biosynthetic process","type":"exact"},{"name":"monacolin K formation","type":"exact"},{"name":"monacolin K synthesis","type":"exact"}],"termid":"GO:0140735"}


id: PBO:0016089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase Nus1 (predicted)","termid":"PBO:0016089"}


id: PBO:0050808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hormonally up-regulated Neu-associated kinase","termid":"PBO:0050808"}


id: GO:1904991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:26554819","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"negative regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904991"}


id: PBO:0017999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop4 (predicted)","termid":"PBO:0017999"}


id: PBO:0089155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Swi6","termid":"PBO:0089155"}


id: GO:0102918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticulinium(1+) + S-adenosyl-L-methionine = (R)-laudanine(1+) + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","RHEA:38907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"(R)-reticuline 7-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.291","MetaCyc:RXN-8701"],"termid":"GO:0102918"}


id: PBO:0030726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-filamentous_actin_absent","termid":"PBO:0030726"}


id: PBO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B6","termid":"PBO:0050496"}


id: PBO:0064126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKHD1 ciliary IPT domain containing fibrocystin/polyductin","termid":"PBO:0064126"}


id: GO:0050167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(R)-pantothenoyl]-L-cysteine + H+ = (R)-pantetheine + CO2.","definition_xrefs":["EC:4.1.1.30","RHEA:15077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"pantothenoylcysteine decarboxylase activity","secondary_identifiers":["MetaCyc:PANTOTHENOYLCYSTEINE-DECARBOXYLASE-RXN","KEGG_REACTION:R02972"],"synonyms":[{"name":"N-((R)-pantothenoyl)-L-cysteine carboxy-lyase activity","type":"related"},{"name":"N-[(R)-pantothenoyl]-L-cysteine carboxy-lyase (pantetheine-forming)","type":"related"},{"name":"N-[(R)-pantothenoyl]-L-cysteine carboxy-lyase activity","type":"related"},{"name":"pantothenylcysteine decarboxylase activity","type":"related"}],"termid":"GO:0050167"}


id: GO:0019479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to D-lactate and ammonia.","definition_xrefs":["MetaCyc:ALACAT2-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-alanine oxidation to D-lactate and ammonia","termid":"GO:0019479"}


id: SO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specific structure at the end of a linear chromosome, required for the integrity and maintenance of the end.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere","secondary_identifiers":["http://en.wikipedia.org/wiki/Telomere"],"synonyms":[{"name":"INSDC_feature:telomere","type":"exact"},{"name":"telomeric DNA","type":"exact"},{"name":"telomeric sequence","type":"exact"}],"termid":"SO:0000624"}


id: GO:1901702
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107683],"is_not":false,"summary":null,"term":"GO:1901702"}]},"cv_name":"molecular_function","definition":"Enables the transfer of salt from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"salt transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901702","terms_by_termid":{"GO:1901702":null}}


id: PBO:0075181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 11","termid":"PBO:0075181"}


id: PBO:0078917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 6-1","termid":"PBO:0078917"}


id: PBO:0087396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Strand exchange protein; forms helical filament with DNA that searches for homology; involved in recombinational repair of DNA DSBs during vegetative growth and meiosis; phosphorylation by Cdc28p in G2/M phase promotes DNA binding, strand invasion, and primer extension; L1 and L2 motifs of DNA binding site I have critical roles in ensuring DNA fidelity during meiotic recombination; RAD51 and RAD4 pathways confer resistance to benzo[a]pyrene dihydrodiol; homolog of Dmc1p and bacterial RecA","termid":"PBO:0087396"}


id: GO:0075031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"positively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"positive regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"positive regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"positive regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075031"}


id: GO:0035674
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72295,71426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tricarboxylic acid membrane transport","type":"exact"}],"termid":"GO:0035674","terms_by_termid":{"GO:0006843":null}}


id: PBO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pet117 cytochrome c oxidase assembly protein (predicted)","termid":"PBO:0009551"}


id: GO:2000657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apolipoprotein binding.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of apolipoprotein binding","termid":"GO:2000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apolipoprotein binding","termid":"GO:2000657"}


id: PBO:0108987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 11","termid":"PBO:0108987"}


id: PBO:0053790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1043","termid":"PBO:0053790"}


id: PBO:0065139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKX pseudogene 2","termid":"PBO:0065139"}


id: PBO:0110258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110258"}


id: FYPO:0007655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at one or more specific sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:33511417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"increased nucleosome occupancy","synonyms":[{"name":"increased nucleosome occupancy during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy during vegetative growth","type":"exact"}],"termid":"FYPO:0007655"}


id: GO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a uropod. A uropod is a membrane projection with related cytoskeletal components at the trailing edge of a migrating cell.","definition_xrefs":["GOC:add","GOC:pf","ISBN:0781735149","PMID:12714569","PMID:12787750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to trailing edge","termid":"GO:0036051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to uropod","synonyms":[{"name":"protein localisation to uropod","type":"exact"}],"termid":"GO:0036052"}


id: GO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligopeptide from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity oligopeptide transmembrane transporter activity","synonyms":[{"name":"high affinity oligopeptide transporter activity","type":"exact"},{"name":"high-affinity oligopeptide transporter activity","type":"related"}],"termid":"GO:0015334"}


id: PBO:0049971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 17","termid":"PBO:0049971"}


id: FYPO:0007438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which activation of the mitotic spindle assembly checkpoint begins earlier than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:28017606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"premature activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"advanced activation of mitotic spindle assembly checkpoint","type":"exact"},{"name":"premature activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007438"}


id: MOD:01541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01541"}


id: PBO:0040071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 2","termid":"PBO:0040071"}


id: FYPO:0002493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA 5'-adenosine monophosphate hydrolase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"reduced DNA 5'-adenosine monophosphate hydrolase activity","type":"exact"}],"termid":"FYPO:0002493"}


id: PBO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"securin, sister chromatid separation inhibitor","termid":"PBO:0003950"}


id: PBO:0074837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 31B","termid":"PBO:0074837"}


id: SO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is part of a transposable element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_CDS","synonyms":[{"name":"transposable element CDS","type":"exact"}],"termid":"SO:0001896"}


id: PBO:0038818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21 pseudogene 1","termid":"PBO:0038818"}


id: GO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075161)","synonyms":[{"name":"negative regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075161"}


id: PATO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001095 force value (obsolete PATO:0001095)","termid":"PATO:0001095"}


id: PBO:0083152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF SEC6/YIL068C","termid":"PBO:0083152"}


id: GO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the hydrogenosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"hydrogenosome","termid":"GO:0042566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"hydrogenosome lumen","termid":"GO:0034492"}


id: PBO:0061642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 divergent transcript","termid":"PBO:0061642"}


id: GO:1904349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small intestine smooth muscle contraction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"is_a","term_name":"regulation of small intestine smooth muscle contraction","termid":"GO:1904347"},{"relation_name":"positively_regulates","term_name":"small intestine smooth muscle contraction","termid":"GO:1990770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of small intestine smooth muscle contraction","synonyms":[{"name":"activation of small intestine smooth muscle contraction","type":"narrow"},{"name":"up regulation of small intestine smooth muscle contraction","type":"exact"},{"name":"up-regulation of small intestine smooth muscle contraction","type":"exact"},{"name":"upregulation of small intestine smooth muscle contraction","type":"exact"}],"termid":"GO:1904349"}


id: GO:0048393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell differentiation","termid":"GO:0048392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate commitment","synonyms":[{"name":"intermediate mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0048393"}


id: GO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor resulting in the reduction of the frequency, rate or extent of branch elongation involved in ureteric bud branching, the growth of a branch of the ureteric bud along its axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway (obsolete GO:0072097)","synonyms":[{"name":"negative regulation of branch elongation involved in ureteric bud branching by BMP signalling pathway","type":"exact"}],"termid":"GO:0072097"}


id: GO:0032920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of putrescine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine acetylation","termid":"GO:0032920"}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: PBO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit (predicted)","termid":"PBO:0001522"}


id: PBO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor B","termid":"PBO:0001446"}


id: SO:1000085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a change in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000085 sequence_variation_affecting_level_of_transcript (obsolete SO:1000085)","synonyms":[{"name":"mutation affecting level of transcript","type":"related"},{"name":"sequence variation affecting level of transcript","type":"exact"}],"termid":"SO:1000085"}


id: PBO:0089213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP 3'tRNA nucleotidyltransferase Cca2","termid":"PBO:0089213"}


id: GO:0032263
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74810],"is_not":false,"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"Any process which produces guanosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GMP biosynthetic process","termid":"GO:0006177"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GMP salvage","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0032263","terms_by_termid":{"GO:0032263":null}}


id: PBO:0044647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopachrome tautomerase","termid":"PBO:0044647"}


id: GO:0090050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell migration","termid":"GO:0043536"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"positively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090050"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: GO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of receptor activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of receptor activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044511"}


id: GO:0102160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-glucuronate = H+ + cyanidin 3-O-beta-(2-O-beta-D-glucuronosyl)-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity","secondary_identifiers":["RHEA:28258","MetaCyc:RXN-11756"],"termid":"GO:0102160"}


id: PBO:0059831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal regulatory transcription factor 1","termid":"PBO:0059831"}


id: PBO:0085610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in directionality of mating type switching; acts with Fkh1p to control which donor mating-type locus is inserted into MAT locus during mating type switching; localized to the nucleus; not an essential gene","termid":"PBO:0085610"}


id: GO:0031692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-1B adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"alpha-1B adrenergic receptor binding","synonyms":[{"name":"alpha-1B adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031692"}


id: PBO:0060927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFAT activating protein with ITAM motif 1","termid":"PBO:0060927"}


id: GO:0005045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A receptor in the endoplasmic reticulum.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete endoplasmic reticulum receptor activity (obsolete GO:0005045)","synonyms":[{"name":"endoplasmic reticulum receptor activity","type":"exact"}],"termid":"GO:0005045"}


id: PBO:0089797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CREG1 ortholog","termid":"PBO:0089797"}


id: GO:0004145
data:
  {"annotated_genes":["SJAG_02296","SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83203,96142],"is_not":false,"summary":null,"term":"GO:0004145"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alkane-alpha,omega-diamine = CoA + an N-acetyldiamine.","definition_xrefs":["EC:2.3.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02296":null,"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"diamine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DIAMACTRANS-RXN","Reactome:R-HSA-351207","RHEA:25181","Reactome:R-HSA-351208"],"synonyms":[{"name":"acetyl-CoA:alkane-alpha,omega-diamine N-acetyltransferase activity","type":"related"},{"name":"acetyl-coenzyme A-1,4-diaminobutane N-acetyltransferase activity","type":"narrow"},{"name":"diamine acetyltransferase activity","type":"exact"},{"name":"putrescine (diamine)-acetylating enzyme activity","type":"narrow"},{"name":"putrescine N-acetyltransferase activity","type":"narrow"},{"name":"putrescine acetylase activity","type":"narrow"},{"name":"putrescine acetyltransferase activity","type":"narrow"},{"name":"spermidine N(1)-acetyltransferase activity","type":"narrow"},{"name":"spermidine N1-acetyltransferase activity","type":"related"},{"name":"spermidine acetyltransferase activity","type":"narrow"},{"name":"spermidine/spermine N1-acetyltransferase activity","type":"related"},{"name":"spermine N(1)-acetyltransferase","type":"narrow"},{"name":"spermine N-acetyltransferase","type":"related"},{"name":"spermine acetyltransferase","type":"narrow"}],"termid":"GO:0004145","terms_by_termid":{"GO:0004145":null}}


id: GO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into a cell, typically presynaptic neurons or glial cells. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"serotonin uptake","synonyms":[{"name":"5-HT uptake","type":"exact"},{"name":"5-hydroxytryptamine uptake","type":"exact"},{"name":"5HT uptake","type":"exact"},{"name":"serotonin import","type":"exact"}],"termid":"GO:0051610"}


id: PBO:0053921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1218","termid":"PBO:0053921"}


id: SO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is not divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift"],"termid":"SO:0000865"}


id: GO:0048441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the petal over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"corolla development","termid":"GO:0048465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal development","secondary_identifiers":["GO:0048417"],"termid":"GO:0048441"}


id: PBO:0027157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_arginine_level","termid":"PBO:0027157"}


id: GO:1902220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:TermGenie","PMID:14569084","GOC:mtg_apoptosis","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"narrow"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"}],"termid":"GO:1902220"}


id: PBO:0063236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 1","termid":"PBO:0063236"}


id: GO:0102431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H(+) + O2 = a (5Z,9Z,12Z)-octadecatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (9Z,12Z,15Z)-octadecatrienoyl-containing glycerolipid) and add a fourth double bond (a (5Z,9Z,12Z,15Z)-octadecatetraenoyl-containing glycerolipid).","definition_xrefs":["RHEA:46236","GOC:pz","RHEA:38039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid omega-(9-4) desaturase activity","secondary_identifiers":["EC:1.14.19.12","MetaCyc:RXN-13858","GO:0102430","MetaCyc:RXN-13857"],"synonyms":[{"name":"acyl-lipid omega-(9-4) desaturase","type":"exact"},{"name":"alpha-linolenate delta5 desaturase activity","type":"narrow"},{"name":"linoleate delta5 desaturase activity","type":"related"}],"termid":"GO:0102431"}


id: PBO:0083610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame, unlikely to encode a protein; overlaps almost completely with YDL119C; mutations that would affect both YDL118W and YDL119C confer defective telomere maintenance and are synthetically sick or lethal with alpha-synuclein","termid":"PBO:0083610"}


id: PBO:0031176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_normal_size_cell","termid":"PBO:0031176"}


id: PBO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP16 nucleolar protein","termid":"PBO:0061236"}


id: GO:0000073
data:
  {"annotated_genes":["SJAG_04745","SJAG_00773","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74884,76671,90911],"is_not":false,"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated mitotic spindle pole bodies (SPBs) that begins with the nucleation of microtubules from each SPB within the nucleus, leading to V-shaped spindle microtubules. Interpolar microtubules that elongate from each pole are interconnected, forming overlapping microtubules. Capturing and antiparallel sliding apart of microtubules promotes the initial separation of the SPB.","definition_xrefs":["GOC:vw","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body separation","termid":"GO:0110100"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"},{"relation_name":"part_of","term_name":"mitotic spindle pole body organization","termid":"GO:1905047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0000226","GO:0008150","GO:0007010","GO:0000070"],"is_obsolete":false,"name":"initial mitotic spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030475"],"termid":"GO:0000073","terms_by_termid":{"GO:0000073":null}}


id: PBO:0060033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 21","termid":"PBO:0060033"}


id: GO:0060957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an endocardial cell fate and its capacity to differentiate into an endocardial cell. An endocardial cell is a specialized endothelial cell that makes up the endocardium portion of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate commitment","termid":"GO:0060839"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"endocardial cell differentiation","termid":"GO:0060956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cell fate commitment","termid":"GO:0060957"}


id: PBO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 28","termid":"PBO:0071487"}


id: GO:0007509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of mesodermal cells during gastrulation to help establish the multilayered body plan of the organism.","definition_xrefs":["GOC:sat","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell migration","termid":"GO:0008078"},{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"is_a","term_name":"tissue migration","termid":"GO:0090130"},{"relation_name":"part_of","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm migration involved in gastrulation","termid":"GO:0007509"}


id: MOD:00990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00990"}


id: GO:0150075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150075"}


id: PR:O94583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.11c","synonyms":[{"name":"Spom972h-SPCC1442.11c","type":"exact"}],"termid":"PR:O94583"}


id: GO:1901626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of postsynaptic membrane organization","synonyms":[{"name":"regulation of post-synaptic membrane organization","type":"exact"},{"name":"regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901626"}


id: PBO:0064150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2 pseudogene 1","termid":"PBO:0064150"}


id: PBO:0067575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 732, pseudogene","termid":"PBO:0067575"}


id: SO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between +20 and +30 relative to the TSS. Consensus sequence is CSARCSSAACGS. Tends to co-occur with INR motif (SO:0000014). Tends to not occur with DPE motif (SO:0000015) or DMv5 (SO:0001159).","definition_xrefs":["PMID:12537576:15231738","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTE","synonyms":[{"name":"CSARCSSAACGS","type":"narrow"},{"name":"motif ten element","type":"exact"},{"name":"motif_ten_element","type":"exact"}],"termid":"SO:0001162"}


id: PR:G2TRR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.11 gene.","definition_xrefs":["UniProtKB:G2TRR9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.11","synonyms":[{"name":"Spom972h-SPBPB21E7.11","type":"exact"}],"termid":"PR:G2TRR9"}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: SO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site to which a polypeptide will bind with a zinc finger motif, which is characterized by requiring one or more Zinc 2+ ions for stabilized folding.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc_finger_binding_site","synonyms":[{"name":"zinc finger binding site","type":"exact"},{"name":"zinc_fing","type":"exact"}],"termid":"SO:0001971"}


id: PBO:0072737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A2","termid":"PBO:0072737"}


id: GO:0036208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:bf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone gene expression (obsolete GO:0036208)","synonyms":[{"name":"down-regulation of histone gene expression","type":"exact"},{"name":"downregulation of histone gene expression","type":"exact"},{"name":"inhibition of histone gene expression","type":"narrow"},{"name":"negative regulation of expression of histone-encoding gene","type":"exact"}],"termid":"GO:0036208"}


id: GO:2000038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal complex development","termid":"GO:2000038"}


id: PR:Q9P7X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13337:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.16","secondary_identifiers":["UniProtKB:Q9P7X0"],"synonyms":[{"name":"CybS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP23A10.16","type":"related"},{"name":"Spom972h-SDHD","type":"exact"},{"name":"succinate-ubiquinone reductase membrane anchor subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim18","type":"related"}],"termid":"PR:Q9P7X0"}


id: PBO:0062722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily T member 1","termid":"PBO:0062722"}


id: PBO:0072815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 10","termid":"PBO:0072815"}


id: PBO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0002465"}


id: PBO:0041255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 198","termid":"PBO:0041255"}


id: MOD:01390
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-valine residue to form L-valine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7328054","RESID:AA0467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-methylpropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-methylpropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Val-Cys)","type":"exact"},{"name":"L-valine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01390"}


id: PBO:0086755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be an inactive evolutionary remnant that along with neighboring gene YOL162W may have constituted a second sulfonate transporter and SOA1 paralog that is intact in S. uvarum, S. eubayanus and S. arboricola and named SOA2; member of the Dal5p subfamily of the major facilitator family","termid":"PBO:0086755"}


id: GO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptide tryptophan + O2 = peptide formylkynurenine.","definition_xrefs":["MetaCyc:PEPTIDE-TRYPTOPHAN-23-DIOXYGENASE-RXN","PMID:4403729","EC:1.13.11.26"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide-tryptophan 2,3-dioxygenase activity (obsolete GO:0050169)","synonyms":[{"name":"peptide-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"peptidyltryptophan 2,3-dioxygenase activity","type":"related"},{"name":"pyrrolooxygenase activity","type":"related"},{"name":"tryptophan pyrrolooxygenase activity","type":"related"}],"termid":"GO:0050169"}


id: PR:Q9US02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC664.12c gene.","definition_xrefs":["UniProtKB:Q9US02","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.12c","synonyms":[{"name":"SDH assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC664.12c","type":"exact"}],"termid":"PR:Q9US02"}


id: PBO:0050396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 1","termid":"PBO:0050396"}


id: PBO:0089273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic P body 3'-5'-exoribonuclease, Dis3L2-related","termid":"PBO:0089273"}


id: PBO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 30, pseudogene","termid":"PBO:0070073"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: PBO:0084430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL64 is a nonfunctional homolog of the MAL63 trans-activator; encoded within the complex locus MAL6","termid":"PBO:0084430"}


id: GO:0009404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"toxin metabolic process","synonyms":[{"name":"toxin metabolism","type":"exact"}],"termid":"GO:0009404"}


id: GO:0062121
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97886],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle chromosome organization process in which LinE complexes closely associate with chromatin during meiotic prophase to form mature linear elements.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"part_of","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"linear element maturation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LinE chromosome loading","type":"exact"},{"name":"LinE focus formation","type":"exact"}],"termid":"GO:0062121","terms_by_termid":{"GO:0062123":null}}


id: PBO:0075987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAU2 pseudogene 1","termid":"PBO:0075987"}


id: GO:0043522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.","definition_xrefs":["InterPro:IPR002158","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LRR domain binding","termid":"GO:0030275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"leucine zipper domain binding","synonyms":[{"name":"leucine zipper binding","type":"exact"}],"termid":"GO:0043522"}


id: PBO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Uch1","termid":"PBO:0002467"}


id: GO:0050993
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dimethylallyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPP metabolic process","type":"exact"},{"name":"DPP metabolism","type":"exact"},{"name":"dimethylallyl diphosphate metabolism","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolic process","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0050993","terms_by_termid":{"GO:0050992":null}}


id: GO:0016356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete organophosphorus susceptibility/resistance (obsolete GO:0016356)","synonyms":[{"name":"organophosphorus susceptibility/resistance","type":"exact"}],"termid":"GO:0016356"}


id: PBO:0054625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2030","termid":"PBO:0054625"}


id: GO:0140281
data:
  {"annotated_genes":["SJAG_00514","SJAG_01114","SJAG_01188","SJAG_04468","SJAG_03342","SJAG_03704","SJAG_04666","SJAG_05290","SJAG_03631","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76845,85592,88068,89441,100623,101822,102473,108683,110732,113106],"is_not":false,"summary":null,"term":"GO:0140281"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of division septum assembly","termid":"GO:0010973"},{"relation_name":"is_a","term_name":"regulation of mitotic division septum assembly","termid":"GO:0140279"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"positively_regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"activation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"activation of mitotic division septum assembly","type":"exact"},{"name":"activation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"activation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"positive regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"},{"name":"up regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of mitotic division septum assembly","type":"exact"},{"name":"up regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of mitotic division septum assembly","type":"exact"},{"name":"up-regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"up-regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"exact"},{"name":"upregulation of septin assembly and septum formation involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0140281","terms_by_termid":{"GO:0140281":null}}


id: GO:0044541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways performed by an organism resulting in the proteolytic processing of an inactive enzyme to an active form in another organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zymogen activation","termid":"GO:0031638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"zymogen activation in another organism","synonyms":[{"name":"zymogen activation in other organism","type":"exact"}],"termid":"GO:0044541"}


id: PBO:0077434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 168","termid":"PBO:0077434"}


id: PBO:0058778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7112","termid":"PBO:0058778"}


id: PBO:0108599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-negatively_regulates_characteristic","termid":"PBO:0108599"}


id: PR:Q9Y704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok14 gene.","definition_xrefs":["UniProtKB:Q9Y704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.04","synonyms":[{"name":"Spom972h-mok14","type":"exact"}],"termid":"PR:Q9Y704"}


id: GO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.","definition_xrefs":["ISBN:0198506732","NIF_Subcellular:sao1038025871"],"gene_count":0,"genotype_count":0,"name":"obsolete polysome (obsolete GO:0005844)","secondary_identifiers":["Wikipedia:Polysome"],"synonyms":[{"name":"polyribosome","type":"exact"}],"termid":"GO:0005844"}


id: PBO:0029491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiotic_cell_cycle","termid":"PBO:0029491"}


id: PBO:0064589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTEH antisense RNA 1","termid":"PBO:0064589"}


id: PBO:0053158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLR antisense RNA 1","termid":"PBO:0053158"}


id: SO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the same strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_parallel","synonyms":[{"name":"inside intron parallel","type":"exact"}],"termid":"SO:0000071"}


id: PBO:0068449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 23, pseudogene","termid":"PBO:0068449"}


id: GO:1905328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a septum over time, from its formation to the mature structure.","definition_xrefs":["PMID:4562349","GO_REF:0000080","GOC:tb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant septum development","synonyms":[{"name":"dissepiment development","type":"broad"}],"termid":"GO:1905328"}


id: PBO:0044386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 13","termid":"PBO:0044386"}


id: PBO:0075832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin","termid":"PBO:0075832"}


id: PBO:0042300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit beta","termid":"PBO:0042300"}


id: PBO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase (predicted)","termid":"PBO:0003029"}


id: PBO:0038397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_during","termid":"PBO:0038397"}


id: GO:0052856
data:
  {"annotated_genes":["SJAG_02462"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73132],"is_not":false,"summary":null,"term":"GO:0052856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-NADHX = (S)-NADHX.","definition_xrefs":["PMID:21994945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"NADHX epimerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:32215","EC:5.1.99.6"],"termid":"GO:0052856","terms_by_termid":{"GO:0052856":null}}


id: PBO:0005450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Bub1","termid":"PBO:0005450"}


id: GO:0044383
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information, occurring within a host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host chromosome","termid":"GO:0044383"}


id: PBO:0066163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBFA downstream neighbor","termid":"PBO:0066163"}


id: PBO:0075656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, erythrocytic 1","termid":"PBO:0075656"}


id: PBO:0067773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 73","termid":"PBO:0067773"}


id: MOD:01015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an isovaline.","definition_xrefs":["DeltaMass:110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unnatural residue","termid":"MOD:00850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isovaline residue (Iva)","synonyms":[{"name":"2-amino-2-methylbutanoic acid","type":"exact"},{"name":"Isovalyl (-I-,-Iva-)","type":"exact"},{"name":"Iva","type":"exact"}],"termid":"MOD:01015"}


id: GO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate.","definition_xrefs":["EC:5.3.3.12","RHEA:13041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"dopachrome isomerase activity","secondary_identifiers":["GO:0048059","KEGG_REACTION:R03673","MetaCyc:DOPACHROME-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"DCF activity","type":"related"},{"name":"DCT activity","type":"related"},{"name":"L-dopachrome isomerase activity","type":"related"},{"name":"L-dopachrome keto-enol isomerase activity","type":"related"},{"name":"L-dopachrome-methyl ester tautomerase activity","type":"related"},{"name":"TRP activity","type":"related"},{"name":"TRP-1","type":"related"},{"name":"TRP-2","type":"related"},{"name":"TRP2","type":"related"},{"name":"dopachrome Delta(7),Delta(2)-isomerase activity","type":"related"},{"name":"dopachrome conversion activity","type":"broad"},{"name":"dopachrome conversion factor activity","type":"broad"},{"name":"dopachrome delta-isomerase activity","type":"exact"},{"name":"dopachrome delta7,Delta2-isomerase activity","type":"related"},{"name":"dopachrome keto-enol isomerase activity","type":"related"},{"name":"dopachrome oxidoreductase activity","type":"related"},{"name":"dopachrome rearranging enzyme activity","type":"related"},{"name":"dopachrome tautomerase activity","type":"related"},{"name":"dopachrome-rearranging enzyme","type":"related"},{"name":"tryosinase-related protein-2","type":"related"},{"name":"tyrosinase-related protein 2 activity","type":"related"}],"termid":"GO:0004167"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: PBO:0064388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 10","termid":"PBO:0064388"}


id: GO:0001067
data:
  {"annotated_genes":["SJAG_04855","SJAG_03346","SJAG_00037","SJAG_03519","SJAG_01916","SJAG_01694","SJAG_00693","SJAG_01930","SJAG_04036","SJAG_02922","SJAG_04712","SJAG_05288","SJAG_03014","SJAG_06576","SJAG_01441","SJAG_04749","SJAG_00979","SJAG_02052","SJAG_00664","SJAG_03473","SJAG_00926","SJAG_05343","SJAG_05253","SJAG_01343","SJAG_05331","SJAG_03879","SJAG_04421","SJAG_02747","SJAG_02730","SJAG_04813","SJAG_02048","SJAG_02252","SJAG_01243","SJAG_02406","SJAG_00987","SJAG_03918","SJAG_02415","SJAG_02752","SJAG_04611","SJAG_01307","SJAG_03622","SJAG_00692","SJAG_00202","SJAG_01583","SJAG_00124","SJAG_02938","SJAG_00698","SJAG_01707","SJAG_02810","SJAG_00386","SJAG_00792","SJAG_04388","SJAG_06599","SJAG_05247","SJAG_02472","SJAG_05339","SJAG_04191","SJAG_05006","SJAG_03241","SJAG_04092","SJAG_00802","SJAG_01740","SJAG_04839","SJAG_03923","SJAG_00163","SJAG_02138","SJAG_02956","SJAG_02813","SJAG_02709","SJAG_00210","SJAG_03735","SJAG_02311","SJAG_02326","SJAG_00304","SJAG_01532","SJAG_02569","SJAG_00958","SJAG_00421","SJAG_03538","SJAG_03143","SJAG_03120","SJAG_00073","SJAG_02242","SJAG_02691","SJAG_02149","SJAG_03183","SJAG_04249","SJAG_00266","SJAG_01725","SJAG_04584","SJAG_05153","SJAG_03354","SJAG_05337","SJAG_02218","SJAG_04917","SJAG_03484","SJAG_02254","SJAG_03388","SJAG_03911","SJAG_04009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001046"},{"annotations":[76278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001018"},{"annotations":[77890,88805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001165"},{"annotations":[104549,75104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001164"},{"annotations":[78476,98833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001163"},{"annotations":[76953,72720,104584,99038,97009,76589,77945,74399,83816,93108,107227,90357,106256,93683,73336,73532,101692,73718,92956,107268,106412,93106,78446,111866,73278,85819,106224,78168,108726,73028,113542,106240,75565,93109,88930,84790,93105,99931,95334,97778,92514,95647,88117,111733,103005,90340,71971,104044,87582,93991,98187,77238,78630,95038,78539,109004,92166,110126,78919,92643,70084,75123,84232,72446,97547,71694,85203,77254,89704,93107,101552,75034,84177,91643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000978"},{"annotations":[102483,104212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"},{"annotations":[107228,91184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"},{"annotations":[103006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"},{"annotations":[84548,75643,76118,77127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000977"},{"annotations":[83967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000992"},{"annotations":[69945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[69946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[76678,91187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"},{"annotations":[71604,103874,71899,75543,72740,78725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000976"},{"annotations":[97780,73773,73807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001147"}]},"cv_name":"molecular_function","definition":"Binding to a nucleic acid region that regulates a nucleic acid-based process. 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id: SO:1000132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The effect of a change in nucleotide sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000132 sequence_variant_effect (obsolete SO:1000132)","synonyms":[{"name":"sequence variant effect","type":"related"}],"termid":"SO:1000132"}


id: PBO:0080409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37C subunit of ESCRT-I","termid":"PBO:0080409"}


id: GO:0016942
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor complex","termid":"GO:0036454"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"insulin-like growth factor binding protein complex","synonyms":[{"name":"IGF binding protein complex","type":"exact"}],"termid":"GO:0016942"}


id: PR:Q8WZK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ibp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8WZK3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase ibp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.07","synonyms":[{"name":"Itsy bitsy phosphatase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ibp1","type":"exact"},{"name":"cdc25-like phosphatase ibp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8WZK3"}


id: PBO:0048304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 14","termid":"PBO:0048304"}


id: PBO:0074565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 19","termid":"PBO:0074565"}


id: PATO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's sensitivity towards a fixed location or value where a change is observed; upper limit.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threshold","termid":"PATO:0000152"}


id: GO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"}


id: GO:0002546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kinin cascade","termid":"GO:0002257"},{"relation_name":"is_a","term_name":"regulation of tissue kallikrein-kinin cascade","termid":"GO:0002382"},{"relation_name":"negatively_regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"negative regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"down regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"down-regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"downregulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"inhibition of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"negative regulation of glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002546"}


id: PBO:0059223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 5 (gene/pseudogene)","termid":"PBO:0059223"}


id: GO:0002690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"positively_regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte chemotaxis","synonyms":[{"name":"activation of leukocyte chemotaxis","type":"narrow"},{"name":"positive regulation of immune cell chemotaxis","type":"exact"},{"name":"positive regulation of leucocyte chemotaxis","type":"exact"},{"name":"stimulation of leukocyte chemotaxis","type":"narrow"},{"name":"up regulation of leukocyte chemotaxis","type":"exact"},{"name":"up-regulation of leukocyte chemotaxis","type":"exact"},{"name":"upregulation of leukocyte chemotaxis","type":"exact"}],"termid":"GO:0002690"}


id: PBO:0034431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_G0_to_G1_transition","termid":"PBO:0034431"}


id: FYPO:0000095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bleomycin. Cells stop growing (and may die) at a concentration of bleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to bleomycin","synonyms":[{"name":"hypersensitive to bleomycin","type":"exact"},{"name":"sensitive to bleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000095"}


id: FYPO:0002594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation occurs to a greater extent than normal. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"increased histone phosphorylation during vegetative growth","synonyms":[{"name":"increased histone phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002594"}


id: PBO:0047022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A25, pseudogene","termid":"PBO:0047022"}


id: PBO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt/Rab-specific guanyl-nucleotide exchange factor (GEF) subunit Ric1","termid":"PBO:0002555"}


id: GO:0018816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyisobutyrate = H2O + methacrylate.","definition_xrefs":["UM-BBD_reactionID:r0618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyisobutyrate dehydratase activity","termid":"GO:0018816"}


id: GO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-2 complex","synonyms":[{"name":"laminin-211 complex","type":"exact"}],"termid":"GO:0005607"}


id: PBO:0048471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell nuclear acidic peptidase","termid":"PBO:0048471"}


id: FYPO:0001238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing staurosporine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on staurosporine","synonyms":[{"name":"normal cell population growth in presence of staurosporine","type":"exact"},{"name":"normal cell population growth on staurosporine","type":"exact"},{"name":"normal cellular response to staurosporine","type":"related"},{"name":"normal vegetative cell population growth on staurosporine","type":"exact"}],"termid":"FYPO:0001238"}


id: PBO:0108569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L histone deacetylase complex subunit, Sds3-like family protein Dep1","termid":"PBO:0108569"}


id: PBO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament medium pseudogene 1","termid":"PBO:0060844"}


id: GO:0048615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract morphogenesis","termid":"GO:0048613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic anterior midgut (ectodermal) morphogenesis","termid":"GO:0048615"}


id: PBO:0039708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte plasma membrane associated protein","termid":"PBO:0039708"}


id: FYPO:0004617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete increased rate of microtubule depolymerization at minus end (obsolete FYPO:0004617)","synonyms":[{"name":"decreased microtubule stability","type":"related"},{"name":"increased microtubule depolymerization rate at minus end","type":"exact"},{"name":"increased microtubule minus end shrinkage","type":"related"},{"name":"increased rate of microtubule catastrophe at minus end","type":"related"},{"name":"increased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"increased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"increased rate of minus-end specific microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004617"}


id: PBO:0084110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein regulator; binds to Hsp90p and may stimulate ATPase activity; originally identified as a high-copy number suppressor of a HSP90 loss-of-function mutation; role in regulating Hsp90 inhibitor drug sensitivity; GFP-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084110"}


id: PBO:0024861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family Abh1","termid":"PBO:0024861"}


id: PBO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, thiamine Km 6 uM","termid":"PBO:0011085"}


id: PBO:0045558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 2","termid":"PBO:0045558"}


id: RO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_into","termid":"RO:0001001"}


id: PBO:0030171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030171"}


id: GO:0036272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gemcitabine stimulus. Gemcitabine is a 2'-deoxycytidine having geminal fluoro substituents in the 2'-position, and is used as a drug in the treatment of various carcinomas.","definition_xrefs":["GOC:hp","Wikipedia:Gemcitabine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gemcitabine","synonyms":[{"name":"response to 2',2'-difluorodeoxycytidine","type":"exact"},{"name":"response to 2'-deoxy-2',2'-difluorocytidine","type":"exact"}],"termid":"GO:0036272"}


id: PBO:0085701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA polymerase II transcription; also required for histone modifications and splicing; constitutively recruited to the CYC1 promoter and required for recruitment of chromatin remodeling factors for the expression of CYC1 gene; interacts genetically or physically with RNAP II, TBP, TFIIS, and chromatin remodelling factors; central domain is highly conserved throughout eukaryotes; mutations confer an Spt- phenotype","termid":"PBO:0085701"}


id: GO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-delta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:15546383","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-delta production","secondary_identifiers":["GO:0072646"],"synonyms":[{"name":"IFN-delta production","type":"exact"},{"name":"IFND production","type":"exact"},{"name":"interferon-delta secretion","type":"narrow"}],"termid":"GO:0072645"}


id: PBO:0048301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAPDH divergent transcript","termid":"PBO:0048301"}


id: PBO:0087208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; required for wybutosine formation in phenylalanine-accepting tRNA; member of the seven beta-strand family","termid":"PBO:0087208"}


id: PBO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.3","termid":"PBO:0000692"}


id: SO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature start codon is gained.","definition_xrefs":["Sanger:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_premature_start_codon_variant","termid":"SO:0001983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_premature_start_codon_gain_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR premature start codon gain variant","type":"exact"},{"name":"Jannovar:5_prime_UTR_premature_start_codon_gain_variant","type":"exact"},{"name":"snpEff:START_GAINED","type":"exact"}],"termid":"SO:0001988"}


id: PBO:0059300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L48 pseudogene 1","termid":"PBO:0059300"}


id: GO:0102812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + cyanidin 3-O-beta-D-glucoside betaine = cyanidin 3-(p-coumaroyl)-glucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"4-coumaroyl-CoA:cyanidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8204"],"termid":"GO:0102812"}


id: PBO:0042109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 182","termid":"PBO:0042109"}


id: PBO:0063307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 1","termid":"PBO:0063307"}


id: PBO:0041058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9","termid":"PBO:0041058"}


id: FYPO:0000207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to caffeine is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to caffeine","synonyms":[{"name":"abnormal cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0000207"}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: RO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_endoparasite","termid":"RO:0002635"}


id: PATO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001207 absolute compatability (obsolete PATO:0001207)","termid":"PATO:0001207"}


id: PBO:0056438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 11","termid":"PBO:0056438"}


id: GO:0030761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3',4',5,7,8-hexahydroxyflavone + S-adenosyl-L-methionine(1+) = 3,3',4',5,7-pentahydroxy-8-methoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:16593","EC:2.1.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"8-hydroxyquercitin 8-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.88-RXN","KEGG_REACTION:R04398"],"synonyms":[{"name":"8-hydroxyquercetin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3,3',4',5,7,8-hexahydroxyflavone 8-O-methyltransferase activity","type":"related"},{"name":"flavonol 8-O-methyltransferase activity","type":"related"},{"name":"flavonol 8-methyltransferase activity","type":"related"}],"termid":"GO:0030761"}


id: PBO:0005789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide kinase Grc3 (predicted)","termid":"PBO:0005789"}


id: PBO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0005418"}


id: PBO:0045591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 2 (pseudogene)","termid":"PBO:0045591"}


id: PBO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 32","termid":"PBO:0050215"}


id: PBO:0017491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"db_creation_datetime","termid":"PBO:0017491"}


id: PR:O94260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nxt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.11","synonyms":[{"name":"Spom972h-nxt3","type":"exact"}],"termid":"PR:O94260"}


id: PBO:0080126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 4","termid":"PBO:0080126"}


id: PBO:0064740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 76","termid":"PBO:0064740"}


id: PBO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 2","termid":"PBO:0046002"}


id: PBO:0086852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins","termid":"PBO:0086852"}


id: PBO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 44","termid":"PBO:0050342"}


id: GO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.","definition_xrefs":["TC:2.A.21.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium-dependent multivitamin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-429581","Reactome:R-HSA-199206","Reactome:R-HSA-199219"],"termid":"GO:0008523"}


id: PBO:0028598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrostatic_pressure","termid":"PBO:0028598"}


id: GO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyterpenoid compounds, terpenoids with more than eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"polyterpenoid metabolic process","synonyms":[{"name":"polyterpene metabolic process","type":"narrow"},{"name":"polyterpene metabolism","type":"narrow"},{"name":"polyterpenoid metabolism","type":"exact"}],"termid":"GO:0016111"}


id: PBO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 antisense RNA 1","termid":"PBO:0052121"}


id: PBO:0085209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidoreductase of the mitochondrial inner membrane; involved in cytoplasmic and mitochondrial iron homeostasis and required for activity of Fe-S cluster-containing enzymes; one of the few mitochondrial proteins essential for viability","termid":"PBO:0085209"}


id: PBO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk2 (predicted)","termid":"PBO:0002598"}


id: PBO:0045077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 4","termid":"PBO:0045077"}


id: PBO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp11","termid":"PBO:0005174"}


id: PBO:0090920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase Guk1","termid":"PBO:0090920"}


id: PBO:0036029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heat","termid":"PBO:0036029"}


id: PBO:0049322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 1","termid":"PBO:0049322"}


id: GO:0006282
data:
  {"annotated_genes":["SJAG_01205","SJAG_03048","SJAG_00573","SJAG_04457","SJAG_02104","SJAG_00823","SJAG_03695","SJAG_00369","SJAG_03160","SJAG_03417"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89519,102017,105557],"is_not":false,"summary":null,"term":"GO:0006282"},{"annotations":[97862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[112499,107379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[102826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[86608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[104711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_01205":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03417":null,"SJAG_03695":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006282","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1904332":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: SO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that is a hybrid of lambda phages and a plasmid that can be propagated as a plasmid or packaged as a phage,since they retain the lambda cos sites.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Cosmid"],"synonyms":[{"name":"cosmid vector","type":"exact"}],"termid":"SO:0000156"}


id: GO:0098573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial membrane (obsolete GO:0098573)","synonyms":[{"name":"intrinsic to mitochondrial membrane","type":"narrow"}],"termid":"GO:0098573"}


id: GO:1990176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in maltose transport through the plasma membrane. In E. coli, the complex is a tetramer and consists of a cytoplasmic ATPase MalK homodimer together with a heterodimeric transmembrane subunit MalF-MalG.","definition_xrefs":["GOC:bhm","PMID:19250913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"maltose transport complex","termid":"GO:1990060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"MalFGK2 complex","synonyms":[{"name":"MalF-MalG-MalK(2) complex","type":"exact"},{"name":"MalF-MalG-MalK-MalK complex","type":"exact"},{"name":"MalFGK(2) complex","type":"exact"},{"name":"maltose transport MalFGK2 complex","type":"exact"},{"name":"maltose transport complex, core subunit","type":"exact"}],"termid":"GO:1990176"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: PATO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A yeast mating type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yeast mating type","termid":"PATO:0001337"}


id: GO:0034946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-isopropylbut-3-enoyl-CoA + H2O = 3-isopropylbut-3-enoic acid + CoASH.","definition_xrefs":["UM-BBD_reactionID:r0994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"3-isopropylbut-3-enoyl-CoA thioesterase activity","termid":"GO:0034946"}


id: PBO:0064818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3A","termid":"PBO:0064818"}


id: PBO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific cysteine protease, OTU family, Otu2","termid":"PBO:0002781"}


id: PBO:0084616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease subunit of 19S regulatory particle; part of 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes; protein abundance increases in response to DNA replication stress","termid":"PBO:0084616"}


id: FYPO:0006083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain four spores form following conjugation and subsequent sporulation, but sporulation is not entirely normal.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000121","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with four spores","synonyms":[{"name":"ascospore formation resulting in formation of asci with four spores","type":"exact"},{"name":"normal spore number","type":"exact"},{"name":"sporulation resulting in formation of asci with four spores","type":"exact"}],"termid":"FYPO:0006083"}


id: GO:0004484
data:
  {"annotated_genes":["SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74669],"is_not":false,"summary":null,"term":"GO:0004484"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue.","definition_xrefs":["EC:2.7.7.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9815529","Reactome:R-HSA-77083","Reactome:R-HSA-77081","RHEA:54592","MetaCyc:MRNA-GUANYLYLTRANSFERASE-RXN"],"synonyms":[{"name":"GTP--RNA guanylyltransferase activity","type":"related"},{"name":"GTP:mRNA guanylyltransferase activity","type":"exact"},{"name":"mRNA capping enzyme activity","type":"related"},{"name":"messenger RNA guanylyltransferase activity","type":"related"},{"name":"protein lambda2","type":"related"}],"termid":"GO:0004484","terms_by_termid":{"GO:0004484":null}}


id: GO:1905420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any vascular smooth muscle cell differentiation that is involved in phenotypic switching.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:25089138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"},{"relation_name":"is_a","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905420"}


id: PBO:0079310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4C","termid":"PBO:0079310"}


id: PBO:0004715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Shk1","termid":"PBO:0004715"}


id: GO:0090583
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-sorbitol(out) = protein cysteine + D-sorbitol-1-phosphate(in).","definition_xrefs":["PMID:8875915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0003824","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-D-sorbitol-phosphotransferase system transporter activity","termid":"GO:0090583"}


id: GO:0180012
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  {"annotated_genes":["SJAG_01791","SJAG_03853","SJAG_02551","SJAG_01599","SJAG_02037","SJAG_02668","SJAG_04587","SJAG_03500","SJAG_01412","SJAG_02720","SJAG_03226","SJAG_02865","SJAG_03624","SJAG_03126","SJAG_01175","SJAG_04942","SJAG_04022","SJAG_03233","SJAG_00961","SJAG_03594","SJAG_00527","SJAG_00435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100433,89102,88569,106917,100169,94647,110570,83430,95824,93706,86333,106641,100203,113411,108888,95154,92770,107299,84163,88470,105198,89080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II RNA transcripts by 3' end cleavage and addition of a poly(A) tail. This pathway is required for the maturation of primary protein-encoding transcripts into functional RNAs that can be exported from the nucleus and translated in the cytoplasm, but is also required for polyadenylation-dependent decay.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3'-end processing of RNA polymerase II transcripts","type":"exact"}],"termid":"GO:0180012","terms_by_termid":{"GO:0180010":null}}


id: PBO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 1","termid":"PBO:0061582"}


id: PR:O14301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19856:SF0","OMA:SCHPO00809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C9G1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.05","secondary_identifiers":["UniProtKB:O14301"],"synonyms":[{"name":"Spom972h-WDR1","type":"exact"}],"termid":"PR:O14301"}


id: PBO:0047733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 2","termid":"PBO:0047733"}


id: PBO:0041694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caldesmon 1","termid":"PBO:0041694"}


id: GO:0018757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deisopropylhydroxyatrazine + H2O = NH3 + 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine.","definition_xrefs":["UM-BBD_reactionID:r0121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"deisopropylhydroxyatrazine aminohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05574"],"termid":"GO:0018757"}


id: GO:0102134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (22S)-22-hydroxycampesterol + NADPH + O2 = (22R,23R)-22,23-dihydroxycampesterol + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(22S)-22-hydroxy-campesterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11529"],"termid":"GO:0102134"}


id: PBO:0078838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-2","termid":"PBO:0078838"}


id: GO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to MDA-5, a cytoplasmic pattern recognition receptor that initiates an antiviral signaling pathway upon binding to viral dsRNA.","definition_xrefs":["PMID:19019954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MDA-5 binding","synonyms":[{"name":"MDA5 binding","type":"exact"}],"termid":"GO:0039556"}


id: GO:0008378
data:
  {"annotated_genes":["SJAG_03790","SJAG_03150","SJAG_01972","SJAG_02996","SJAG_03871","SJAG_03149","SJAG_04401","SJAG_04095","SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94338,113255,94479,94336,94335,94337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031278"},{"annotations":[106077,106071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001962"},{"annotations":[101204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_01972":null,"SJAG_02996":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1964501"],"termid":"GO:0008378","terms_by_termid":{"GO:0001962":null,"GO:0031278":null,"GO:0047220":null}}


id: PBO:0075850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2","termid":"PBO:0075850"}


id: PBO:0000681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies6","termid":"PBO:0000681"}


id: PBO:0042643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 18 pseudogene","termid":"PBO:0042643"}


id: PR:Q1K9C4
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hul5 gene.","definition_xrefs":["UniProtKB:Q1K9C4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin protein ligase C167.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.07c","synonyms":[{"name":"Spom972h-hul5","type":"exact"}],"termid":"PR:Q1K9C4"}


id: PBO:0087804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored type II integral peroxisomal membrane protein; required for peroxisome biogenesis; cells lacking Pex15p mislocalize peroxisomal matrix proteins to cytosol; overexpression results in impaired peroxisome assembly","termid":"PBO:0087804"}


id: GO:0102510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = anthocyanidin 3,5-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14439"],"termid":"GO:0102510"}


id: GO:0022804
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  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the transfer of a specific substance or related group of substances from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":98,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_00547":null,"SJAG_00601":null,"SJAG_00612":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01190":null,"SJAG_01344":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01406":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01541":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01872":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_01960":null,"SJAG_02023":null,"SJAG_02050":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02463":null,"SJAG_02504":null,"SJAG_02598":null,"SJAG_02602":null,"SJAG_02646":null,"SJAG_02779":null,"SJAG_02782":null,"SJAG_02958":null,"SJAG_03337":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03401":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03490":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03785":null,"SJAG_03820":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_04015":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04136":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04241":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04406":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04757":null,"SJAG_04905":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"active carrier activity","type":"exact"},{"name":"carrier activity","type":"exact"},{"name":"permease activity","type":"exact"},{"name":"pump activity","type":"exact"}],"termid":"GO:0022804","terms_by_termid":{"GO:0004129":null,"GO:0005315":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005388":null,"GO:0005452":null,"GO:0005471":null,"GO:0008121":null,"GO:0008137":null,"GO:0008271":null,"GO:0008506":null,"GO:0008553":null,"GO:0008554":null,"GO:0008559":null,"GO:0008900":null,"GO:0010486":null,"GO:0015295":null,"GO:0015297":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015398":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015505":null,"GO:0015662":null,"GO:0019829":null,"GO:0034216":null,"GO:0043682":null,"GO:0044604":null,"GO:0046715":null,"GO:0046961":null,"GO:0071913":null,"GO:0097434":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null,"GO:0140987":null}}


id: FYPO:0005857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of antisense RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total antisense RNA or a specific antisense RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"altered antisense RNA level during vegetative growth","synonyms":[{"name":"abnormal antisense RNA level during vegetative growth","type":"exact"},{"name":"altered antisense RNA level during mitotic cell cycle","type":"related"},{"name":"altered antisense RNA transcript level during vegetative growth","type":"exact"},{"name":"altered cellular antisense RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0005857"}


id: GO:0009919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The division of a cell into two daughter cells with cell walls.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis (sensu Viridiplantae) (obsolete GO:0009919)","synonyms":[{"name":"cytokinesis (sensu Viridiplantae)","type":"exact"}],"termid":"GO:0009919"}


id: PBO:0082096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; protein abundance increases in response to DNA replication stress; SOL4 has a paralog, SOL3, that arose from the whole genome duplication","termid":"PBO:0082096"}


id: PBO:0053443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 390","termid":"PBO:0053443"}


id: FYPO:0001165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell that is exposed to anaerobic conditions fails to grow upon being returned to aerobic conditions, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable cell following anaerobic growth","synonyms":[{"name":"inviable following anaerobic vegetative growth","type":"exact"},{"name":"lethal; cell following anaerobic growth","type":"exact"}],"termid":"FYPO:0001165"}


id: GO:0016248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter inhibitor activity","termid":"GO:0141110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"channel inhibitor activity","termid":"GO:0016248"}


id: FYPO:0002990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of leucine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal leucine import","termid":"FYPO:0001139"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased leucine import","synonyms":[{"name":"increased L-leucine import across plasma membrane","type":"exact"},{"name":"increased leucine import during mitotic cell cycle","type":"related"},{"name":"increased leucine import during vegetative growth","type":"exact"},{"name":"increased leucine import into cell","type":"exact"},{"name":"increased leucine uptake","type":"exact"}],"termid":"FYPO:0002990"}


id: GO:1902810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:17879321","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myotube differentiation","termid":"GO:0010832"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle fiber differentiation","synonyms":[{"name":"down regulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"down-regulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"downregulation of skeletal muscle fiber differentiation","type":"exact"},{"name":"inhibition of skeletal muscle fiber differentiation","type":"narrow"}],"termid":"GO:1902810"}


id: GO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues. The structure of this core oligosaccharide appears to be similar in closely related bacterial strains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"part_of","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide core region metabolic process","synonyms":[{"name":"LPS core region metabolic process","type":"exact"},{"name":"lipopolysaccharide core region metabolism","type":"exact"}],"termid":"GO:0046401"}


id: PBO:0079060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 1-1","termid":"PBO:0079060"}


id: PBO:0079055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-1","termid":"PBO:0079055"}


id: GO:0102459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-dADP + H2O = 8-oxo-dAMP + hydrogenphosphate + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"8-oxo-dADP diphosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14005"],"synonyms":[{"name":"8-oxo-deoxyadenine diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0102459"}


id: PATO:0000827
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000827 visual threshold value (obsolete PATO:0000827)","termid":"PATO:0000827"}


id: SO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of an immunoglobuin (IG) gene.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_D_gene","synonyms":[{"name":"IGD_gene","type":"exact"},{"name":"Immunoglobulin_Diversity_ gene","type":"exact"},{"name":"immunoglobulin_D_gene","type":"exact"}],"termid":"SO:0002124"}


id: PBO:0074616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 17A","termid":"PBO:0074616"}


id: PBO:0042512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 17, pseudogene","termid":"PBO:0042512"}


id: PBO:0067497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 633, pseudogene","termid":"PBO:0067497"}


id: PBO:0063036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 3","termid":"PBO:0063036"}


id: GO:0035573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal serine of proteins to form the derivative N,N,N-trimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine trimethylation","termid":"GO:0035573"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: PATO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is less than extreme in type or degree or effect or force.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moderate intensity","termid":"PATO:0000395"}


id: PR:Q10302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.09","synonyms":[{"name":"Spom972h-SPAC22H10.09","type":"exact"}],"termid":"PR:Q10302"}


id: GO:1904506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["PMID:22579284","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"down regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"down-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"downregulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, telomere maintenance","type":"narrow"},{"name":"inhibition of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, telomere maintenance","type":"exact"}],"termid":"GO:1904506"}


id: GO:0060622
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88070,83308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of ascospore wall beta-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0090093"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"regulation of ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060622","terms_by_termid":{"GO:0140748":null}}


id: SO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCAAT, bound by a protein complex that represses transcription in response to low iron levels.","definition_xrefs":["PMID:16963626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT_motif","synonyms":[{"name":"CCAAT motif","type":"exact"}],"termid":"SO:0001856"}


id: PBO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 3","termid":"PBO:0048291"}


id: PBO:0069104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 352, pseudogene","termid":"PBO:0069104"}


id: PBO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2 pseudogene 2","termid":"PBO:0061250"}


id: GO:0071510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in conjugation with cellular fusion (obsolete GO:0071510)","synonyms":[{"name":"activation of MAP kinase kinase kinase activity during conjugation with cellular fusion","type":"exact"},{"name":"activation of MAPKKK activity involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, activation of MAP kinase kinase kinase activity","type":"exact"},{"name":"conjugation with cellular fusion, activation of MAPKKK activity","type":"exact"}],"termid":"GO:0071510"}


id: GO:0005347
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ATP transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005348","Reactome:R-HSA-9717392"],"termid":"GO:0005347","terms_by_termid":{"GO:0005471":null,"GO:0140987":null}}


id: PBO:0086573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contained within the solo Ty1 LTR element YDRWdelta7","termid":"PBO:0086573"}


id: GO:0072540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 17 cell, a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["CL:0000899","GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell lineage commitment","synonyms":[{"name":"T-helper 17 cell fate commitment","type":"exact"},{"name":"Th17 cell lineage commitment","type":"exact"},{"name":"Th17 fate commitment","type":"exact"}],"termid":"GO:0072540"}


id: PBO:0059828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 2","termid":"PBO:0059828"}


id: PBO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.10","termid":"PBO:0004964"}


id: RO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds via some process of localization","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_localization_to","termid":"RO:0002337"}


id: PR:O42890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao2 gene.","definition_xrefs":["UniProtKB:O42890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase-like protein cao2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.16c","synonyms":[{"name":"Spom972h-cao2","type":"exact"}],"termid":"PR:O42890"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: GO:1902480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle.","definition_xrefs":["GOC:TermGenie","PMID:23885124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic spindle","synonyms":[{"name":"protein localisation in mitotic spindle","type":"exact"},{"name":"protein localisation to mitotic spindle","type":"exact"},{"name":"protein localization in mitotic spindle","type":"exact"}],"termid":"GO:1902480"}


id: PBO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS6 divergent transcript","termid":"PBO:0048402"}


id: PBO:0062797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 2","termid":"PBO:0062797"}


id: PBO:0087543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); putative RNA helicase related to Ski2p; involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses; human homolog is ASCC3","termid":"PBO:0087543"}


id: GO:0036267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells into a substrate.","definition_xrefs":["PMID:22276126","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive filamentous growth","synonyms":[{"name":"invasive growth","type":"exact"}],"termid":"GO:0036267"}


id: SO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Snall nuclear RNAs that are incorporated into the pre-mRNAs to replace the 5' end in some eukaryotes.","definition_xrefs":["PMID:24130571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"mini_exon_donor_RNA","termid":"SO:0000635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliced_leader_RNA","synonyms":[{"name":"mini-exon","type":"related"},{"name":"spliced leader RNA","type":"exact"}],"termid":"SO:0000636"}


id: PBO:0089233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear inner membrane protein Heh1/Lem2","termid":"PBO:0089233"}


id: PBO:0089438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex subunit Raf2","termid":"PBO:0089438"}


id: FYPO:0003292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UDP-galactose transmembrane transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal UDP-galactose transmembrane transport","synonyms":[{"name":"abnormal UDP-galactose transmembrane transport during mitotic cell cycle","type":"related"},{"name":"abnormal UDP-galactose transmembrane transport during vegetative growth","type":"exact"}],"termid":"FYPO:0003292"}


id: PR:Q10351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi17 gene.","definition_xrefs":["UniProtKB:Q10351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component PIG-S homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.09","synonyms":[{"name":"Spom972h-gpi17","type":"exact"}],"termid":"PR:Q10351"}


id: GO:0032638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-9 production","secondary_identifiers":["GO:0042229","GO:0072607"],"synonyms":[{"name":"IL-9 production","type":"exact"},{"name":"interleukin-9 biosynthetic process","type":"narrow"},{"name":"interleukin-9 secretion","type":"narrow"}],"termid":"GO:0032638"}


id: PBO:0064993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRCP pseudogene 1","termid":"PBO:0064993"}


id: PATO:0005017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being compressed from the side facing the lips to the side facing the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labiolingually compressed","termid":"PATO:0005017"}


id: GO:0102772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H(+) + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["GOC:pz","EC:1.14.18.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","secondary_identifiers":["RHEA:55808","MetaCyc:RXN-14250"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772"}


id: GO:0010877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipids into cells that is part of their accumulation and maintenance.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"part_of","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid transport involved in lipid storage","termid":"GO:0010877"}


id: GO:0015007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A molecular entity that serves as an electron acceptor and electron donor in a chlorophyll electron transport system.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete electron carrier, chlorophyll electron transport system (obsolete GO:0015007)","synonyms":[{"name":"chlorophyll electron carrier","type":"related"},{"name":"electron carrier, chlorophyll electron transport system","type":"exact"}],"termid":"GO:0015007"}


id: GO:0050074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + malate + CoA = ADP + phosphate + malyl-CoA.","definition_xrefs":["MetaCyc:MALATE--COA-LIGASE-RXN","EC:6.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"malate-CoA ligase activity","secondary_identifiers":["RHEA:26193"],"synonyms":[{"name":"malate thiokinase activity","type":"related"},{"name":"malate:CoA ligase (ADP-forming)","type":"related"},{"name":"malyl coenzyme A synthetase activity","type":"related"},{"name":"malyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050074"}


id: MOD:00943
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:476","PubMed:12643539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-trimethylammoniumbutanoyl derivatized residue","synonyms":[{"name":"4-trimethyllammoniumbutyryl-","type":"related"},{"name":"TMAB","type":"related"}],"termid":"MOD:00943"}


id: PR:Q09854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok11 gene.","definition_xrefs":["UniProtKB:Q09854","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.01","synonyms":[{"name":"Spom972h-mok11","type":"exact"}],"termid":"PR:Q09854"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: PBO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 49","termid":"PBO:0080088"}


id: GO:0035822
data:
  {"annotated_genes":["SJAG_00247","SJAG_02556","SJAG_02828","SJAG_02724","SJAG_01076","SJAG_03221","SJAG_01677","SJAG_02079","SJAG_01601","SJAG_02226","SJAG_03097","SJAG_01495","SJAG_05239","SJAG_02267","SJAG_02460","SJAG_01419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106178,84912,96097,103923,94676,93003,101506,91767,83717,105665,110307,112050,113936,102068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[96062,85034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"}]},"cv_name":"biological_process","definition":"A DNA recombination process that results in the unidirectional transfer of genetic material from a donor sequence to a highly homologous acceptor. The resulting acceptor sequence is identical to that of the donor.","definition_xrefs":["PMID:17846636","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous recombination","termid":"GO:0035825"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01076":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"gene conversion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035822","terms_by_termid":{"GO:0006311":null,"GO:0007534":null}}


id: FYPO:0001796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the centromeric region of a chromosome is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"output_of","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to centromere","synonyms":[{"name":"ectopic protein localization to centromere","type":"exact"},{"name":"protein mislocalised to centromere","type":"exact"},{"name":"protein mislocalised to centromere during vegetative growth","type":"exact"},{"name":"protein mislocalized to centromere during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to centromere during vegetative growth","type":"exact"},{"name":"protein mislocalized to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0001796"}


id: GO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + putrescine = N-methylputrescine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:15037","EC:2.1.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"putrescine N-methyltransferase activity","secondary_identifiers":["MetaCyc:PUTRESCINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01153"],"synonyms":[{"name":"S-adenosyl-L-methionine:putrescine N-methyltransferase activity","type":"related"},{"name":"putrescine methyltransferase activity","type":"related"}],"termid":"GO:0030750"}


id: PBO:0057259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 486-1","termid":"PBO:0057259"}


id: GO:0034398
data:
  {"annotated_genes":["SJAG_03299","SJAG_01263","SJAG_01601","SJAG_01777","SJAG_03680","SJAG_03092","SJAG_01067","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74889],"is_not":false,"summary":null,"term":"GO:0034398"},{"annotations":[85486,101388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[109302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[94682,100549,75253,112115,85489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044820"},{"annotations":[97868],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03299":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034398","terms_by_termid":{"GO:0034398":null,"GO:0044820":null,"GO:0044821":null,"GO:0070197":null,"GO:1904537":null}}


id: PBO:0004200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27","termid":"PBO:0004200"}


id: GO:0004325
data:
  {"annotated_genes":["SJAG_01841","SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73803],"is_not":false,"summary":null,"term":"GO:0004325"},{"annotations":[93374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051266"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: heme B (protoheme) + H+ = Fe(2+) + protoporphyrin IX.","definition_xrefs":["RHEA:22584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01786":null,"SJAG_01841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ferrochelatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PROTOHEMEFERROCHELAT-RXN","KEGG_REACTION:R00310","Reactome:R-HSA-189465","EC:4.98.1.1"],"synonyms":[{"name":"ferro-protoporphyrin chelatase activity","type":"exact"},{"name":"heme synthase activity","type":"broad"},{"name":"heme synthetase activity","type":"broad"},{"name":"iron chelatase activity","type":"broad"},{"name":"protoheme ferro-lyase (protoporphyrin-forming)","type":"exact"},{"name":"protoheme ferro-lyase activity","type":"exact"},{"name":"protoheme ferrolyase activity","type":"exact"}],"termid":"GO:0004325","terms_by_termid":{"GO:0004325":null,"GO:0051266":null}}


id: PBO:0042650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDYL antisense RNA 1","termid":"PBO:0042650"}


id: MOD:01882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the carbonyl of an amino acid residue at position n with the alpha amino of a glycine residue at position n+2 to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"}


id: GO:0051719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing CpN = S-adenosyl-L-homocysteine + DNA containing 5-MeCpN.","definition_xrefs":["PMID:15689527","EC:2.1.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0140097"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates","secondary_identifiers":["Reactome:R-HSA-5334097","Reactome:R-HSA-5334152"],"termid":"GO:0051719"}


id: GO:2000683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to X-ray","synonyms":[{"name":"regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000683"}


id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035711"}


id: GO:0098605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-Serine + Selenohomocysteine => L-Selenocystathionine + H2O.","definition_xrefs":["PMID:6456763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"selenocystathionine beta-synthase activity","secondary_identifiers":["Reactome:R-HSA-2408559"],"termid":"GO:0098605"}


id: PBO:0067519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 660, pseudogene","termid":"PBO:0067519"}


id: PBO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation","termid":"PBO:0030625"}


id: PBO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 3","termid":"PBO:0040998"}


id: PBO:0088078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves Ub-protein fusions; UBP13 has a paralog, UBP9, that arose from the whole genome duplication","termid":"PBO:0088078"}


id: GO:0046636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell activation","synonyms":[{"name":"down regulation of alpha-beta T cell activation","type":"exact"},{"name":"down-regulation of alpha-beta T cell activation","type":"exact"},{"name":"downregulation of alpha-beta T cell activation","type":"exact"},{"name":"inhibition of alpha-beta T cell activation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte activation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell activation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046636"}


id: PBO:0027026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_gene_mRNA_during_vegetative_growth","termid":"PBO:0027026"}


id: PBO:0044088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A8","termid":"PBO:0044088"}


id: PBO:0062620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Z member 1","termid":"PBO:0062620"}


id: SO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Elements of the Tc1-Mariner terminal inverted repeat transposon superfamily (also called mariner transposons) are named after the Transponon of C. elegans number 1 transposasse. Their activity creates a 2-bp (TA) target-site duplication (TSD). Stowaway is the non-autonomous element in this superfamily usually shorter than 600 bp.","definition_xrefs":["PMID:8556864","PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tc1_Mariner_TIR_transposon","synonyms":[{"name":"DTT transposon","type":"exact"},{"name":"Mariner","type":"exact"},{"name":"Stowaway","type":"exact"},{"name":"Tc1 Mariner TIR transposon","type":"exact"},{"name":"Tc1 transposon","type":"exact"},{"name":"TcMar-Stowaway transposon","type":"exact"}],"termid":"SO:0002278"}


id: PBO:0059878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 1","termid":"PBO:0059878"}


id: PBO:0044154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase subunit 1","termid":"PBO:0044154"}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: PR:O14019
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02128","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase hal4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.16","secondary_identifiers":["UniProtKB:O14019"],"synonyms":[{"name":"Spom972h-CDK16","type":"exact"},{"name":"halotolerance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine/threonine-protein kinase ppk10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14019"}


id: PBO:0069730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1011, pseudogene","termid":"PBO:0069730"}


id: PR:P22191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cox1 intron-1 45.6 kDa protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.02","synonyms":[{"name":"Spom972h-SPMIT.02","type":"exact"},{"name":"maturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22191"}


id: GO:0002825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"}


id: FYPO:0005083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA (ncRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at ncRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at ncRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at ncRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at ncRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005083"}


id: PBO:0090464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase The4","termid":"PBO:0090464"}


id: GO:0007396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Closure of the dorsal hole. Filopodia extending from each leading edge interdigitate at the dorsal midline and appear to prime the formation of adherens junctions between the two rows of leading edge cells. Newly formed septate junctions are also used to seal the dorsal hole.","definition_xrefs":["PMID:12147138","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suture of dorsal opening","termid":"GO:0007396"}


id: FYPO:0007391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which an aneuploid spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PMID:22737087","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable aneuploid spore","synonyms":[{"name":"abolished aneuploid spore germination","type":"exact"},{"name":"aneuploid spore germination abolished","type":"exact"},{"name":"decreased aneuploid spore viability","type":"exact"},{"name":"decreased viability of aneuploid cells","type":"related"},{"name":"decreased viability of aneuploid spores","type":"related"},{"name":"lethal in aneuploid spore","type":"related"}],"termid":"FYPO:0007391"}


id: GO:0032386
data:
  {"annotated_genes":["SJAG_04597","SJAG_03453","SJAG_04312","SJAG_02592","SJAG_01311","SJAG_04343","SJAG_01245","SJAG_01805","SJAG_00906","SJAG_04464","SJAG_03048","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[90037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[71320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[89444,95962,106362,97353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86545,89995,97881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[83686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001135"},{"annotations":[83690,87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032386","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0070863":null,"GO:1902854":null,"GO:2001135":null}}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: PBO:0054757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2168","termid":"PBO:0054757"}


id: GO:0007023
data:
  {"annotated_genes":["SJAG_01526","SJAG_04074","SJAG_02672","SJAG_02270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89126,92140,96084,97942],"is_not":false,"summary":null,"term":"GO:0007023"}]},"cv_name":"biological_process","definition":"Completion of folding of alpha- and beta-tubulin; takes place subsequent to chaperonin-mediated partial folding; mediated by a complex of folding cofactors.","definition_xrefs":["PMID:10542094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01526":null,"SJAG_02270":null,"SJAG_02672":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604","GO:0006457"],"is_obsolete":false,"name":"post-chaperonin tubulin folding pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007023","terms_by_termid":{"GO:0007023":null}}


id: GO:0052472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of its symbiont's transcription.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of symbiont transcription","termid":"GO:0052472"}


id: PBO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Sme1","termid":"PBO:0003764"}


id: GO:1904580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21471000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular mRNA localization","synonyms":[{"name":"regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"regulation of intracellular mRNA localisation","type":"exact"},{"name":"regulation of intracellular mRNA positioning","type":"narrow"},{"name":"regulation of mRNA localization, intracellular","type":"exact"},{"name":"regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904580"}


id: PBO:0004454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3a","termid":"PBO:0004454"}


id: FYPO:0000110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to pravastatin. Cells stop growing (and may die) at a concentration of pravastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to pravastatin","synonyms":[{"name":"hypersensitive to pravastatin","type":"exact"},{"name":"sensitive to pravastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to pravastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0000110"}


id: FYPO:0005208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization during meiotic cell cycle","synonyms":[{"name":"abolished protein localisation during meiotic cell cycle","type":"exact"},{"name":"protein absent from specific location in cell during meiotic cell cycle","type":"related"},{"name":"protein localization abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005208"}


id: GO:1900391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cAMP-mediated signaling.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:15448137"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900391)","synonyms":[{"name":"regulation of cAMP-mediated signalling by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900391"}


id: GO:1903258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sorbose is transported from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:2878925","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"sorbose import across plasma membrane","synonyms":[{"name":"sorbose import into cell","type":"exact"}],"termid":"GO:1903258"}


id: PBO:0038938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 2","termid":"PBO:0038938"}


id: PBO:0040485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 1","termid":"PBO:0040485"}


id: PBO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.19","termid":"PBO:0000272"}


id: SO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 5 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"five prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001975"}


id: GO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to DNA in a sequence-independent manner and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:vw","PMID:20123079","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding, bending","termid":"GO:0008301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"non-sequence-specific DNA binding, bending","synonyms":[{"name":"DNA bending involving non-sequence-specific DNA binding","type":"exact"}],"termid":"GO:0044378"}


id: GO:0140729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of an endogenously produced substance. Mechanisms of resistance to endogenously produced compounds include modification the compound, export, sequestration, or mutations in the target enzyme.","definition_xrefs":["PMID:21923907","PMID:29763292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"self-resistance to endogenously produced metabolite","synonyms":[{"name":"prevention of self-toxicity","type":"exact"},{"name":"self-resistance to bioactive secondary metabolite","type":"exact"},{"name":"self-resistance to endogenously produced compound","type":"exact"},{"name":"self-resistance to endogenously produced toxin","type":"exact"}],"termid":"GO:0140729"}


id: PBO:0072344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 30","termid":"PBO:0072344"}


id: GO:0097305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.","definition_xrefs":["PMID:24014527","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to alcohol","secondary_identifiers":["GO:1990335"],"synonyms":[{"name":"process resulting in tolerance to alcohol","type":"narrow"}],"termid":"GO:0097305"}


id: PBO:0086256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking; binds phosphatidylinositol 4-phosphate, which plays a role in TGN localization; has homology to gamma-adaptin; GGA2 has a paralog, GGA1, that arose from the whole genome duplication","termid":"PBO:0086256"}


