# terms

id: GO:0048737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation in the imaginal disc to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism.","definition_xrefs":["GOC:rc","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived appendage development","termid":"GO:0048737"}


id: PBO:0060022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 10","termid":"PBO:0060022"}


id: GO:0000323
data:
  {"annotated_genes":["SJAG_00570","SJAG_01344","SJAG_02114","SJAG_00212","SJAG_01319","SJAG_02440","SJAG_01219","SJAG_02957","SJAG_00821","SJAG_02344","SJAG_02432","SJAG_00209","SJAG_01983","SJAG_03652","SJAG_01095","SJAG_03442","SJAG_03072","SJAG_01112","SJAG_00299","SJAG_02132","SJAG_01941","SJAG_03138","SJAG_03987","SJAG_02117","SJAG_02694","SJAG_03089","SJAG_00029","SJAG_03400","SJAG_02060","SJAG_00132","SJAG_02315","SJAG_03450","SJAG_00771","SJAG_02665","SJAG_04426","SJAG_02853","SJAG_01505","SJAG_04506","SJAG_05342","SJAG_04643","SJAG_01990","SJAG_05213","SJAG_00402","SJAG_01978","SJAG_02196","SJAG_01619","SJAG_03406","SJAG_01817","SJAG_02656","SJAG_03137","SJAG_01803","SJAG_04714","SJAG_01571","SJAG_04966","SJAG_04955","SJAG_01509","SJAG_01145","SJAG_02902","SJAG_01036","SJAG_04312","SJAG_01324","SJAG_03497","SJAG_01078","SJAG_04698","SJAG_01471","SJAG_01507","SJAG_01795","SJAG_03909","SJAG_02103","SJAG_04232","SJAG_03511","SJAG_03250","SJAG_00620","SJAG_00516","SJAG_03316","SJAG_01033","SJAG_01612","SJAG_00018","SJAG_01407","SJAG_00457","SJAG_02433","SJAG_02330","SJAG_00115","SJAG_04015","SJAG_05245","SJAG_02023","SJAG_04471","SJAG_04785","SJAG_05294","SJAG_02356","SJAG_03447","SJAG_03405","SJAG_02029","SJAG_04717","SJAG_04502","SJAG_03313","SJAG_03976","SJAG_03256","SJAG_00732","SJAG_01236","SJAG_01027","SJAG_01400","SJAG_00534","SJAG_05194","SJAG_00638","SJAG_02581","SJAG_01088","SJAG_03960","SJAG_01032","SJAG_00877","SJAG_04975","SJAG_03848","SJAG_01183","SJAG_00051","SJAG_01072","SJAG_01991","SJAG_03928","SJAG_01783","SJAG_02603","SJAG_03656","SJAG_02943","SJAG_04167","SJAG_00181","SJAG_03725","SJAG_02962","SJAG_03586","SJAG_04867","SJAG_07012","SJAG_02699","SJAG_02495","SJAG_02100","SJAG_04963","SJAG_01299","SJAG_03363","SJAG_03951","SJAG_03608","SJAG_00824","SJAG_00370","SJAG_03895","SJAG_03371","SJAG_03606","SJAG_04725","SJAG_02578","SJAG_03508","SJAG_01080","SJAG_01868","SJAG_05210","SJAG_04819","SJAG_02414","SJAG_03899","SJAG_02716","SJAG_04790","SJAG_03667","SJAG_00587","SJAG_00688","SJAG_04637","SJAG_04616","SJAG_04023","SJAG_02782","SJAG_01320","SJAG_03022","SJAG_02076","SJAG_02289","SJAG_01493","SJAG_03100","SJAG_05184","SJAG_02565","SJAG_01913","SJAG_03403","SJAG_03009","SJAG_00589"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78826,74544,73243,83723,98497,102960,70673,104727,105179,112074,71749,73495,92076,94099,70553,97028,99248,99481,103049,90426,104826,113160,83918,104843,91666,97344,98423,72654,75854,85854,93175,104215,77325,107672,108048,84215,108184,110025,74484,109473,78050,99869,85855,75504,92544,72214,94094,78536,90686,70173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000324"},{"annotations":[89551,70556,101189,109477,109745,111115,93204,83266,97183,108620,93415],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[104083,104766,105623,102815,103688,71021,72591,74787,107127,107149,108555,110164,111465,111876,112476,112764,77410,84896,108731,109640,91367,91734,83799,100572,112825,72093,70418,92632,111805,94253,109635,99064,89398,103268,70455,100416,95771,70916,93615,93920,94417,105756,71923,113392,74149,101146,75232,95462,72706,78560,87768,89343,77852,78843,84836,92936,93193,95498,70527,104679,89691,108871,72299,91256,91998,83817,91580,72580,73923,91624,99279,73517,87166,77861,112604,94115,78278,84882,112262,113025,73069,91495,94377,100350,86110,78361,83522,89399,88609,99396,102615,88531,105248,89664,74213,78732,102105,72287,75548,90215,90244,78673,84814,87708,97146,97470,89526,77245,95747,102113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"A vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":171,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00029":null,"SJAG_00051":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00181":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00370":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00570":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00620":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01033":null,"SJAG_01036":null,"SJAG_01072":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01095":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01219":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01407":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01505":null,"SJAG_01507":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01612":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01868":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02060":null,"SJAG_02076":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02114":null,"SJAG_02117":null,"SJAG_02132":null,"SJAG_02196":null,"SJAG_02289":null,"SJAG_02315":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02440":null,"SJAG_02495":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02581":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02694":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_02962":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03316":null,"SJAG_03363":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03405":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03508":null,"SJAG_03511":null,"SJAG_03586":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03652":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_03976":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04167":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04426":null,"SJAG_04471":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04637":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04717":null,"SJAG_04725":null,"SJAG_04785":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_04867":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05213":null,"SJAG_05245":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lytic vacuole","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000323","terms_by_termid":{"GO:0000324":null,"GO:0000328":null,"GO:0000329":null}}


id: PBO:0108934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLEKHB2 pseudogene 1","termid":"PBO:0108934"}


id: PBO:0065072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 1","termid":"PBO:0065072"}


id: GO:2000573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"positively_regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA biosynthetic process","synonyms":[{"name":"positive regulation of DNA anabolism","type":"exact"},{"name":"positive regulation of DNA biosynthesis","type":"exact"},{"name":"positive regulation of DNA formation","type":"exact"},{"name":"positive regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000573"}


id: PATO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male fertility","synonyms":[{"name":"low male fertility","type":"exact"}],"termid":"PATO:0001833"}


id: PBO:0077517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 232","termid":"PBO:0077517"}


id: PBO:0029175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029175"}


id: GO:1900698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"regulation of o-orsellinic acid formation","type":"exact"},{"name":"regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900698"}


id: GO:0006698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or conformational alteration of ecdysone, resulting in a change in its properties.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ecdysone modification (obsolete GO:0006698)","synonyms":[{"name":"ecdysone modification","type":"exact"}],"termid":"GO:0006698"}


id: GO:1905468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of clathrin-coated pit assembly (obsolete GO:1905468)","synonyms":[{"name":"regulation of clathrin-coated pit formation","type":"exact"},{"name":"regulation of coated pit assembly","type":"exact"},{"name":"regulation of coated pit formation","type":"exact"}],"termid":"GO:1905468"}


id: PBO:0089306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATPase Fft1","termid":"PBO:0089306"}


id: PBO:0072997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 1","termid":"PBO:0072997"}


id: GO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit development","termid":"GO:0010154"}


id: GO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnesium ion","termid":"GO:0032026"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium ion","termid":"GO:0071286"}


id: GO:0036294
data:
  {"annotated_genes":["SJAG_01150","SJAG_00221","SJAG_00642","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107054,112227,96739,105230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036294","terms_by_termid":{"GO:0071456":null}}


id: GO:1900097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of dosage compensation by inactivation of X chromosome (obsolete GO:1900097)","synonyms":[{"name":"activation of Barr body formation","type":"related"},{"name":"activation of X chromosome inactivation","type":"exact"},{"name":"activation of chromosome inactivation","type":"broad"},{"name":"activation of dosage compensation, by inactivation of X chromosome","type":"narrow"},{"name":"positive regulation of Barr body formation","type":"related"},{"name":"positive regulation of X chromosome inactivation","type":"exact"},{"name":"positive regulation of chromosome inactivation","type":"broad"},{"name":"up regulation of Barr body formation","type":"related"},{"name":"up regulation of X chromosome inactivation","type":"exact"},{"name":"up regulation of chromosome inactivation","type":"broad"},{"name":"up regulation of dosage compensation, by inactivation of X chromosome","type":"exact"},{"name":"up-regulation of Barr body formation","type":"related"},{"name":"up-regulation of X chromosome inactivation","type":"exact"},{"name":"up-regulation of chromosome inactivation","type":"broad"},{"name":"up-regulation of dosage compensation, by inactivation of X chromosome","type":"exact"},{"name":"upregulation of Barr body formation","type":"related"},{"name":"upregulation of X chromosome inactivation","type":"exact"},{"name":"upregulation of chromosome inactivation","type":"broad"},{"name":"upregulation of dosage compensation, by inactivation of X chromosome","type":"exact"}],"termid":"GO:1900097"}


id: PBO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-uridine preferring nucleoside hydrolase (predicted)","termid":"PBO:0003117"}


id: GO:1905597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of low-density lipoprotein particle receptor binding.","definition_xrefs":["GO_REF:0000059","PMID:22848640","GOC:BHF","GOC:TermGenie","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"regulation of low-density lipoprotein particle receptor binding","termid":"GO:1905595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of low-density lipoprotein particle receptor binding","synonyms":[{"name":"activation of LDL receptor binding","type":"narrow"},{"name":"activation of low-density lipoprotein particle receptor binding","type":"narrow"},{"name":"activation of low-density lipoprotein receptor binding","type":"narrow"},{"name":"positive regulation of LDL receptor binding","type":"exact"},{"name":"positive regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"up regulation of LDL receptor binding","type":"exact"},{"name":"up regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"up regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"up-regulation of LDL receptor binding","type":"exact"},{"name":"up-regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"upregulation of LDL receptor binding","type":"exact"},{"name":"upregulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:1905597"}


id: PBO:0061411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal pentraxin 2","termid":"PBO:0061411"}


id: GO:1903081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:11602640","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine-mediated signaling pathway","termid":"GO:0070100"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine receptor CCR7 signaling pathway","termid":"GO:1903080"},{"relation_name":"negatively_regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"down regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"down regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"down regulation of CCR7 signaling pathway","type":"related"},{"name":"down-regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"down-regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"down-regulation of CCR7 signaling pathway","type":"related"},{"name":"downregulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"downregulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"downregulation of CCR7 signaling pathway","type":"related"},{"name":"inhibition of C-C chemokine receptor CCR7 signaling pathway","type":"narrow"},{"name":"inhibition of C-C chemokine receptor CCR7 signalling pathway","type":"narrow"},{"name":"inhibition of CCR7 signaling pathway","type":"related"},{"name":"negative regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"negative regulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903081"}


id: GO:0033030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil apoptotic process","termid":"GO:0033029"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil apoptotic process","synonyms":[{"name":"down regulation of neutrophil apoptosis","type":"exact"},{"name":"down-regulation of neutrophil apoptosis","type":"exact"},{"name":"downregulation of neutrophil apoptosis","type":"exact"},{"name":"inhibition of neutrophil apoptosis","type":"narrow"},{"name":"negative regulation of neutrophil apoptosis","type":"narrow"}],"termid":"GO:0033030"}


id: GO:1901249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"lung goblet cell differentiation","termid":"GO:0060480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lung goblet cell differentiation","synonyms":[{"name":"regulation of pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:1901249"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: PBO:0067110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 152, pseudogene","termid":"PBO:0067110"}


id: PBO:0068967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 211, pseudogene","termid":"PBO:0068967"}


id: PBO:0040599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 3","termid":"PBO:0040599"}


id: GO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["PMID:27689881","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of entry into reproductive diapause","termid":"GO:0061963"}


id: GO:0006103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxoglutarate, the dianion of 2-oxoglutaric acid. It is a key constituent of the TCA cycle and a key intermediate in amino-acid metabolism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-oxoglutarate metabolic process","synonyms":[{"name":"2-ketoglutarate metabolic process","type":"exact"},{"name":"2-ketoglutarate metabolism","type":"exact"},{"name":"2-oxoglutarate metabolism","type":"exact"},{"name":"alpha-ketoglutarate metabolic process","type":"exact"},{"name":"alpha-ketoglutarate metabolism","type":"exact"},{"name":"alpha-oxoglutarate metabolic process","type":"exact"},{"name":"alpha-oxoglutarate metabolism","type":"exact"}],"termid":"GO:0006103"}


id: SO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes bases from the coding sequence starting within an existing codon.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive_inframe_deletion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:disruptive_inframe_deletion","type":"exact"},{"name":"disruptive decrease in CDS length","type":"exact"},{"name":"disruptive inframe deletion","type":"exact"},{"name":"snpEff:CODON_CHANGE_PLUS_CODON_DELETION","type":"exact"}],"termid":"SO:0001826"}


id: GO:1903205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydrogen peroxide-induced cell death (obsolete GO:1903205)","synonyms":[{"name":"protection against hydrogen peroxide-mediated cell death","type":"related"},{"name":"regulation of cell death in response to H2O2","type":"exact"},{"name":"regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"regulation of hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:1903205"}


id: GO:1904407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitric oxide metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:11991626","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of nitric oxide metabolic process","termid":"GO:0080164"},{"relation_name":"positively_regulates","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric oxide metabolic process","synonyms":[{"name":"activation of nitric oxide metabolic process","type":"narrow"},{"name":"activation of nitric oxide metabolism","type":"narrow"},{"name":"positive regulation of nitric oxide metabolism","type":"exact"},{"name":"up regulation of nitric oxide metabolic process","type":"exact"},{"name":"up regulation of nitric oxide metabolism","type":"exact"},{"name":"up-regulation of nitric oxide metabolic process","type":"exact"},{"name":"up-regulation of nitric oxide metabolism","type":"exact"},{"name":"upregulation of nitric oxide metabolic process","type":"exact"},{"name":"upregulation of nitric oxide metabolism","type":"exact"}],"termid":"GO:1904407"}


id: GO:0033579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation in endoplasmic reticulum (obsolete GO:0033579)","synonyms":[{"name":"protein amino acid galactosylation in ER","type":"exact"},{"name":"protein amino acid galactosylation in endoplasmic reticulum","type":"exact"}],"termid":"GO:0033579"}


id: GO:0030130
data:
  {"annotated_genes":["SJAG_04609","SJAG_04565","SJAG_02282","SJAG_04517","SJAG_00379","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90501,108227],"is_not":false,"summary":null,"term":"GO:0030130"},{"annotations":[76652,96647,108106,108321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"}]},"cv_name":"cellular_component","definition":"A clathrin coat found on a vesicle of the trans-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin vesicle coat","termid":"GO:0030125"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle membrane","termid":"GO:0012510"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0005794","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"clathrin coat of trans-Golgi network vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"clathrin coat of TGN vesicle","type":"exact"}],"termid":"GO:0030130","terms_by_termid":{"GO:0030121":null,"GO:0030130":null}}


id: FYPO:0005965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lithium import","termid":"FYPO:0005964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased lithium import","synonyms":[{"name":"decreased cellular lithium import","type":"exact"},{"name":"decreased lithium import during mitotic cell cycle","type":"related"},{"name":"decreased lithium import during vegetative growth","type":"exact"},{"name":"decreased lithium import into cell","type":"exact"},{"name":"decreased lithium ion import","type":"exact"},{"name":"reduced lithium import","type":"exact"}],"termid":"FYPO:0005965"}


id: FYPO:0002766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of clotrimazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to clotrimazole","synonyms":[{"name":"resistance to clotrimazole during mitotic cell cycle","type":"related"},{"name":"resistance to clotrimazole during vegetative growth","type":"exact"},{"name":"resistant to clotrimazole","type":"exact"}],"termid":"FYPO:0002766"}


id: PBO:0058181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4475","termid":"PBO:0058181"}


id: PBO:0064524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit D pseudogene 1","termid":"PBO:0064524"}


id: GO:0043110
data:
  {"annotated_genes":["SJAG_00247","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110312],"is_not":false,"summary":null,"term":"GO:0043110"},{"annotations":[97777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"Binding to replication fork barriers found in rDNA spacers, sites that inhibit replication forks in the direction opposite to rDNA transcription.","definition_xrefs":["GOC:jl","PMID:14645529","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA binding","termid":"GO:0000182"},{"relation_name":"is_a","term_name":"replication fork barrier binding","termid":"GO:0031634"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rDNA spacer replication fork barrier binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RFB binding","type":"exact"}],"termid":"GO:0043110","terms_by_termid":{"GO:0043110":null,"GO:0110035":null}}


id: GO:0042500
data:
  {"annotated_genes":["SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90335],"is_not":false,"summary":null,"term":"GO:0042500"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain, occurring within a membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0008233","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"aspartic endopeptidase activity, intramembrane cleaving","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8863101","Reactome:R-HSA-9708457","EC:3.4.23.-"],"termid":"GO:0042500","terms_by_termid":{"GO:0042500":null}}


id: PBO:0068572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 23, pseudogene","termid":"PBO:0068572"}


id: GO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GP40-like receptor activity (obsolete GO:0001630)","synonyms":[{"name":"GP40-like receptor activity","type":"exact"}],"termid":"GO:0001630"}


id: FYPO:0001501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to brefeldin A. Cells stop growing (and may die) at a concentration of brefeldin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to brefeldin A","synonyms":[{"name":"hypersensitive to brefeldin A","type":"exact"},{"name":"sensitive to BFA","type":"exact"},{"name":"sensitive to brefeldin A during mitotic cell cycle","type":"related"},{"name":"sensitive to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001501"}


id: GO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase V, originating at a Pol V-specific promoter.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription by RNA polymerase V","synonyms":[{"name":"transcription from RNA pol V promoter","type":"exact"},{"name":"transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:0001060"}


id: PBO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific SAP domain containing protein","termid":"PBO:0018107"}


id: PBO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151A pseudogene 1","termid":"PBO:0047099"}


id: PBO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 4 pseudogene","termid":"PBO:0062154"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: GO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features of a pancreatic polypeptide-producing cell. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["PMID:11076772","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell differentiation","synonyms":[{"name":"pancreatic polypeptide-producing cell differentiation","type":"exact"}],"termid":"GO:0003312"}


id: GO:0047808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tartrate = H2O + oxaloacetate.","definition_xrefs":["EC:4.2.1.81","RHEA:18289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"D(-)-tartrate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00340","MetaCyc:D--TARTRATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"(S,S)-tartrate hydro-lyase (oxaloacetate-forming)","type":"related"},{"name":"(S,S)-tartrate hydro-lyase activity","type":"related"},{"name":"D-tartrate dehydratase activity","type":"related"}],"termid":"GO:0047808"}


id: GO:0090181
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"cholesterol metabolic process","termid":"GO:0008203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of cholesterol metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0090181","terms_by_termid":{"GO:0045540":null}}


id: GO:0106432
data:
  {"annotated_genes":["SJAG_02179","SJAG_01781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94149,94150],"is_not":false,"summary":null,"term":"GO:0106432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a N-D-queuosine + H2O = queuine + D-ribose.","definition_xrefs":["PMID:35940128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01781":null,"SJAG_02179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"queuosine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"queuosine nucleoside glycosylase","type":"exact"},{"name":"tRNA queuosine nucleoside glycosylase","type":"exact"}],"termid":"GO:0106432","terms_by_termid":{"GO:0106432":null}}


id: GO:0045761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase regulator","type":"related"},{"name":"regulation of adenylyl cyclase activity","type":"exact"}],"termid":"GO:0045761"}


id: PR:P22774-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-1.","definition_xrefs":["UniProtKB:P22774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Long (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-1"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Long","type":"exact"},{"name":"heat shock 70 kDa protein, mitochondrial isoform Mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22774-1"}


id: PBO:0054983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2397","termid":"PBO:0054983"}


id: PBO:0076762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase 1","termid":"PBO:0076762"}


id: PBO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family mitochondrial protein (predicted)","termid":"PBO:0017500"}


id: PBO:0054861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2275","termid":"PBO:0054861"}


id: GO:0000247
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88244],"is_not":false,"summary":null,"term":"GO:0000247"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols.","definition_xrefs":["PMID:8988026","MetaCyc:RXN3O-203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"C-8 sterol isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"delta-8-delta-7 sterol isomerase activity","type":"exact"}],"termid":"GO:0000247","terms_by_termid":{"GO:0000247":null}}


id: PBO:0081307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 2","termid":"PBO:0081307"}


id: MOD:00436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylhexosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylhexosaminylated residue","synonyms":[{"name":"HexNAc","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:00436"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: MOD:00494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12185208","Unimod:123#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","synonyms":[{"name":"ICAT-H","type":"related"},{"name":"N-iodoacetyl, p-chlorobenzyl-12C6-glucamine","type":"related"}],"termid":"MOD:00494"}


id: PBO:0058003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-2","termid":"PBO:0058003"}


id: PBO:0075896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 antisense RNA 2","termid":"PBO:0075896"}


id: PBO:0017608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase II","termid":"PBO:0017608"}


id: PBO:0043190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN1A interacting zinc finger protein 1","termid":"PBO:0043190"}


id: PBO:0079853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B2 (pseudogene)","termid":"PBO:0079853"}


id: PBO:0070417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 2 pseudogene 1","termid":"PBO:0070417"}


id: GO:2000928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of cellodextrin metabolic process","termid":"GO:2000925"},{"relation_name":"is_a","term_name":"regulation of cellodextrin catabolic process","termid":"GO:2000927"},{"relation_name":"negatively_regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellodextrin catabolic process","synonyms":[{"name":"negative regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000928"}


id: PBO:0003503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase (predicted)","termid":"PBO:0003503"}


id: PBO:0070824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 2","termid":"PBO:0070824"}


id: PBO:0090584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59","termid":"PBO:0090584"}


id: PBO:0082514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the histone acetyltransferase complex (NuA4); acetylates four conserved internal lysines of histone H4 N-terminal tail and can acetylate histone H2A; master regulator of cellular acetylation balance; required for cell cycle progression and transcriptional silencing at the rDNA locus and regulation of autophagy; human ortholog TIP60/KAT5 is implicated in cancer and other diseases, functionally complements lethality of the esa1 null mutation","termid":"PBO:0082514"}


id: SO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An instance of a self-interacting DNA region flanked by left and right TAD boundaries.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain","synonyms":[{"name":"TAD","type":"exact"},{"name":"topologically associated domain","type":"exact"}],"termid":"SO:0002304"}


id: PBO:0043940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRTC3 antisense RNA 1","termid":"PBO:0043940"}


id: PBO:0036314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 complex ATP-dependent 5' to 3' DNA/RNA helicase Sen1","termid":"PBO:0036314"}


id: PR:Q50HP3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc19 gene.","definition_xrefs":["UniProtKB:Q50HP3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit spc19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.15c","synonyms":[{"name":"Spom972h-spc19","type":"exact"},{"name":"outer kinetochore protein spc19 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP3"}


id: PBO:0086856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; involved in regulation of early and middle sporulation genes; forms amyloid-like aggregates under starvation that are active in translational repression","termid":"PBO:0086856"}


id: FYPO:0003124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal cytoplasmic translation","synonyms":[{"name":"abnormal cytoplasmic protein biosynthesis","type":"exact"},{"name":"abnormal cytoplasmic protein synthesis","type":"exact"},{"name":"abnormal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0003124"}


id: GO:0023051
data:
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id: FYPO:0006672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating cells undergo transient cell fusion (cytogamy), and then one or both cells undergo haploid meiosis and sporulation. In transient cytogamy, cells fuse for a much shorter time than normal during mating, separate with incomplete exchange of cytosol contents, and the conjugation pore then reseals.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"},{"relation_name":"has_part","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000301"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"transient cell fusion during mating followed by meiotic cell cycle entry and sporulation","synonyms":[{"name":"transient cell fusion during mating followed by meiotic cell cycle entry and sporulation in haploid","type":"exact"},{"name":"transient cytogamy followed by meiotic cell cycle entry and sporulation in haploid","type":"exact"}],"termid":"FYPO:0006672"}


id: PBO:0079256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 28","termid":"PBO:0079256"}


id: PBO:0065287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 2","termid":"PBO:0065287"}


id: PBO:0065411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 8","termid":"PBO:0065411"}


id: PBO:0110198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.1","termid":"PBO:0110198"}


id: PBO:0110974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog, implicated in rRNA transcription or rRNA processing","termid":"PBO:0110974"}


id: GO:0035351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"heme transmembrane transport","synonyms":[{"name":"heme membrane transport","type":"exact"}],"termid":"GO:0035351"}


id: MOD:00532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12845591","Unimod:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shimadzu 13CNBS","synonyms":[{"name":"NBS:13C(6)","type":"related"},{"name":"Shimadzu NBS-13C","type":"related"}],"termid":"MOD:00532"}


id: PBO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.-","termid":"PBO:0000865"}


id: GO:0051232
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96949],"is_not":false,"summary":null,"term":"GO:0051232"}]},"cv_name":"biological_process","definition":"The lengthening of the distance between poles of the spindle during a meiotic cell cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle elongation","termid":"GO:0051231"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle organization","termid":"GO:0000212"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0000226","GO:0140013","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle elongation during meiosis","type":"exact"}],"termid":"GO:0051232","terms_by_termid":{"GO:0051232":null}}


id: PBO:0066049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein 2","termid":"PBO:0066049"}


id: PBO:0031225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_cadmium_ion","termid":"PBO:0031225"}


id: FYPO:0002729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"DNA content increased","synonyms":[{"name":"increased DNA content","type":"exact"},{"name":"increased DNA level","type":"exact"}],"termid":"FYPO:0002729"}


id: PBO:0083765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential membrane protein localized at nuclear envelope and SPBs; required for insertion of the newly duplicated spindle pole body into the nuclear envelope; potentially phosphorylated by Cdc28p; MPS2 has a paralog, CSM4, that arose from the whole genome duplication","termid":"PBO:0083765"}


id: FYPO:0002397
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[114583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[114673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[114625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal cytoskeleton organization","termid":"FYPO:0000802"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta","pom1delta","rga4delta"],"synonyms":[{"name":"abnormal cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0002397","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0017131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U-rich sequence in the 3'-end of nuclear-transcribed mRNAs; required for cytoplasmic polyadenylylation.","definition_xrefs":["PMID:7954828","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"uridine-rich cytoplasmic polyadenylylation element binding","synonyms":[{"name":"U-rich CPE binding","type":"exact"},{"name":"uridine-rich cytoplasmic polyadenylation element binding","type":"exact"}],"termid":"GO:0017131"}


id: PBO:0065914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB guanine nucleotide exchange factor 1","termid":"PBO:0065914"}


id: PBO:0091056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing RNA export factor Rsm1","termid":"PBO:0091056"}


id: GO:0018478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxopropanoate + CoA + NAD(P)+ = acetyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["EC:1.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"malonate-semialdehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:RXN-9958"],"synonyms":[{"name":"3-oxopropanoate:NAD(P)+ oxidoreductase (decarboxylating, CoA-acetylating)","type":"related"},{"name":"malonic semialdehyde oxidative decarboxylase activity","type":"exact"}],"termid":"GO:0018478"}


id: PBO:0079592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 4","termid":"PBO:0079592"}


id: PBO:0070402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP2 activator of ARL3 GTPase","termid":"PBO:0070402"}


id: PBO:0044580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 2","termid":"PBO:0044580"}


id: SO:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region forming a motif, composed of adenines, where the minor groove edges are inserted into the minor groove of another helix.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_minor_RNA_motif","synonyms":[{"name":"A minor RNA motif","type":"exact"}],"termid":"SO:0000022"}


id: PBO:0069642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 919, pseudogene","termid":"PBO:0069642"}


id: FYPO:0003627
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"protein localization phenotype","termid":"FYPO:0002333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localisation","type":"exact"},{"name":"normal cellular protein localization","type":"exact"},{"name":"normal protein localisation","type":"exact"}],"termid":"FYPO:0003627","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: GO:0061543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-6 = S-adenosyl-L-homocysteine + ubiquinol-6.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-6 3-O-methyltransferase activity (obsolete GO:0061543)","termid":"GO:0061543"}


id: PBO:0042515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing p53 target 1","termid":"PBO:0042515"}


id: GO:0052777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diacetylchitobiose into simpler products.","definition_xrefs":["PMID:22797760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diacetylchitobiose metabolic process","termid":"GO:0052778"},{"relation_name":"is_a","term_name":"amino disaccharide catabolic process","termid":"GO:0052782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diacetylchitobiose catabolic process","synonyms":[{"name":"diacetylchitobiose catabolism","type":"exact"}],"termid":"GO:0052777"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: PBO:0053831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1096","termid":"PBO:0053831"}


id: GO:0106092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a glial cell process or projection to wrap around an axon.","definition_xrefs":["GOC:ha","PMID:27131624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"},{"relation_name":"is_a","term_name":"glial cell projection elongation","termid":"GO:0106091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell projection elongation involved in axon ensheathment","termid":"GO:0106092"}


id: GO:0140221
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Host-derived membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:26842840","PMID:10560000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole membrane","synonyms":[{"name":"pathogen inclusion membrane","type":"related"},{"name":"pathogen-containing compartment membrane","type":"exact"}],"termid":"GO:0140221"}


id: PBO:0052798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 38","termid":"PBO:0052798"}


id: PBO:0016898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug35","termid":"PBO:0016898"}


id: PBO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position ade5","termid":"PBO:0005861"}


id: PR:Q9UT49
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.04c","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid13","type":"exact"},{"name":"caffeine-induced death protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT49"}


id: PATO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A protruding quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded out of the surface or boundary of another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding out of","termid":"PATO:0001646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herniated out of","termid":"PATO:0002167"}


id: PBO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase involved in sporulation","termid":"PBO:0002070"}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: GO:0062088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of vein smooth muscle contraction.","definition_xrefs":["PMID:8428203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vein smooth muscle contraction","termid":"GO:0062086"},{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle contraction","termid":"GO:1904694"},{"relation_name":"negatively_regulates","term_name":"vein smooth muscle contraction","termid":"GO:0014826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vein smooth muscle contraction","termid":"GO:0062088"}


id: PBO:0067610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 782, pseudogene","termid":"PBO:0067610"}


id: GO:0006026
data:
  {"annotated_genes":["SJAG_00620","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97029,87433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan breakdown","type":"exact"},{"name":"aminoglycan catabolism","type":"exact"},{"name":"aminoglycan degradation","type":"exact"}],"termid":"GO:0006026","terms_by_termid":{"GO:0034232":null}}


id: FYPO:0004437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of mitotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17515930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic recombination","termid":"FYPO:0000503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic recombination frequency","synonyms":[{"name":"normal mitotic recombination frequency during vegetative growth","type":"exact"},{"name":"normal occurrence of mitotic recombination","type":"exact"},{"name":"normal recombination frequency during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004437"}


id: PBO:0066364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 5","termid":"PBO:0066364"}


id: GO:1901026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of ripoptosome components leading to a necroptotic process.","definition_xrefs":["GOC:TermGenie","PMID:22274400","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ripoptosome assembly","termid":"GO:0097343"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"ripoptosome assembly involved in necroptotic process","synonyms":[{"name":"ripoptosome assembly involved in necroptosis","type":"narrow"}],"termid":"GO:1901026"}


id: PBO:0109112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 2B, tRNA N3-cytidine","termid":"PBO:0109112"}


id: GO:0106145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes of the reaction: scopoletin + 2-oxoglutarate+O2=fraxetin +succinate+ CO2).","definition_xrefs":["PMID:29361149","PMID:29581584","GOC:lr","RHEA:57848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"scopoletin 8-hydroxylase activity","secondary_identifiers":["EC:1.14.11.60"],"termid":"GO:0106145"}


id: FYPO:0002755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cysteine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal cysteine synthase activity","termid":"FYPO:0002754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased cysteine synthase activity","synonyms":[{"name":"reduced cysteine synthase activity","type":"exact"}],"termid":"FYPO:0002755"}


id: PBO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex catalytic subunit Dcp2","termid":"PBO:0001561"}


id: GO:0098015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the virion that may be used to recognize, attach and inject the viral genome and accessory proteins into the host cell.","definition_xrefs":["VZ:3958","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail","synonyms":[{"name":"bacteriophage tail","type":"narrow"},{"name":"viral tail","type":"related"}],"termid":"GO:0098015"}


id: PBO:0056899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIER1 transcriptional regulator","termid":"PBO:0056899"}


id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: PATO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased force","synonyms":[{"name":"increased force amplitude","type":"exact"}],"termid":"PATO:0002245"}


id: PBO:0076124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 6","termid":"PBO:0076124"}


id: GO:0052563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont immune response (obsolete GO:0052563)","synonyms":[{"name":"negative regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052563"}


id: GO:0018108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine.","definition_xrefs":["RESID:AA0039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine phosphorylation","termid":"GO:0018108"}


id: PATO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000775 learning value (obsolete PATO:0000775)","termid":"PATO:0000775"}


id: PBO:0026663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026663"}


id: PBO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Alanine","termid":"PBO:0000669"}


id: PBO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.5","termid":"PBO:0002224"}


id: PR:Q1MTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger membrane protein C15C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.06c","synonyms":[{"name":"Spom972h-SPBC15C4.06c","type":"exact"}],"termid":"PR:Q1MTR5"}


id: GO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sinapaldehyde + NADPH + H+ = sinapyl-alcohol + NADP+.","definition_xrefs":["MetaCyc:RXN-1125","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sinapyl alcohol dehydrogenase activity","secondary_identifiers":["RHEA:45704","KEGG_REACTION:R03918","EC:1.1.1.195"],"synonyms":[{"name":"sinapyl-alcohol dehydrogenase activity","type":"related"},{"name":"sinapyl-alcohol:NADP+ oxidoreductase activity","type":"exact"}],"termid":"GO:0052747"}


id: PBO:0055798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2, pseudogene","termid":"PBO:0055798"}


id: PBO:0077867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 8","termid":"PBO:0077867"}


id: FYPO:0004296
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[114534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004295"},{"annotations":[114637,114638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the cell contains one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_00118"],"name":"septated cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_01143","SJAG_00118"],"single_locus_genotype_uniquenames":["mid2delta","pmk1delta","mid1delta"],"synonyms":[{"name":"septum present","type":"exact"}],"termid":"FYPO:0004296","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: FYPO:0002297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized throughout the cell cortex (rather than concentrated at the cell ends as in wild type cells) during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dispersed actin cortical patch localization during vegetative growth","termid":"FYPO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"dispersed actin cortical patch localization during mitotic interphase","synonyms":[{"name":"delocalised actin cortical patches during mitotic interphase","type":"exact"},{"name":"delocalized actin cortical patches during mitotic interphase","type":"exact"},{"name":"dispersed F-actin patch localization during mitotic interphase","type":"exact"},{"name":"dispersed actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"dispersed actin cortical patch localization during interphase of mitotic cell cycle","type":"related"},{"name":"dispersed actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch location during mitotic interphase","type":"related"},{"name":"dispersed actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002297"}


id: PR:O14274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-tyrosyl-tRNA(Tyr) deacylase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10472:SF3","PRO:DNx","OMA:SCHPO01522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-tyrosyl-tRNA(Tyr) deacylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.05","secondary_identifiers":["UniProtKB:O14274"],"synonyms":[{"name":"Spom972h-DTD1","type":"exact"}],"termid":"PR:O14274"}


id: PBO:0064093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pitrilysin metallopeptidase 1","termid":"PBO:0064093"}


id: GO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002109"}


id: PBO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-3, pseudogene","termid":"PBO:0052878"}


id: PBO:0090036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3844 family transmembrane protein, conserved in fungi","termid":"PBO:0090036"}


id: MOD:00224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to 1-chondroitin sulfate-L-aspartic acid ester","definition_xrefs":["PubMed:1898736","RESID:AA0219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-chondroitin sulfate-L-aspartic acid ester","synonyms":[{"name":"1-aspartic acid ester with 6-chondroitin 4-sulfate","type":"exact"},{"name":"1-chondroitin sulfate-L-aspartic acid ester","type":"exact"},{"name":"MOD_RES Aspartate 1-(chondroitin 4-sulfate)-ester","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-6-(1-L-aspartyl)-D-galactose)","type":"exact"},{"name":"protein-glycosaminoglycan-protein cross-link","type":"exact"}],"termid":"MOD:00224"}


id: PBO:0079733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 10 (pseudogene)","termid":"PBO:0079733"}


id: PBO:0073236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1","termid":"PBO:0073236"}


id: SO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon that has been redefined at translation. The redefinition may be as a result of translational bypass, translational frameshifting or stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_codon","synonyms":[{"name":"recoded codon","type":"exact"}],"termid":"SO:0000145"}


id: PBO:0029080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029080"}


id: PBO:0030414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistant_to_cell_wall_digestion","termid":"PBO:0030414"}


id: PBO:0045406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 8","termid":"PBO:0045406"}


id: PBO:0082458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+-dependent cysteine protease; may cleave specific substrates during the stress response; regulates apoptosis upon H2O2 treatment; required for clearance of insoluble protein aggregates during normal growth; implicated in cell cycle dynamics and lifespan extension; undergoes autocatalytic processing; similar to mammalian metacaspases, but exists as a monomer due to an extra pair of anti-parallel beta-strands that block potential dimerization","termid":"PBO:0082458"}


id: GO:0004757
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103934],"is_not":false,"summary":null,"term":"GO:0004757"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrobiopterin + NADP+ = sepiapterin + NADPH + H+.","definition_xrefs":["EC:1.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sepiapterin reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SEPIAPTERIN-REDUCTASE-RXN","Reactome:R-HSA-1497869","RHEA:18953","Reactome:R-HSA-1475414"],"synonyms":[{"name":"7,8-dihydrobiopterin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004757","terms_by_termid":{"GO:0004757":null}}


id: GO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by lymphocytes expressing specific receptors for antigen produced through a somatic diversification process that includes somatic recombination of germline gene segments encoding immunoglobulin superfamily domains. Recombined receptors for antigen encoded by immunoglobulin superfamily domains include T cell receptors and immunoglobulins (antibodies) produced by B cells. The first encounter with antigen elicits a primary immune response that is slow and not of great magnitude. T and B cells selected by antigen become activated and undergo clonal expansion. A fraction of antigen-reactive T and B cells become memory cells, whereas others differentiate into effector cells. The memory cells generated during the primary response enable a much faster and stronger secondary immune response upon subsequent exposures to the same antigen (immunological memory). An example of this is the adaptive immune response found in Mus musculus.","definition_xrefs":["ISBN:0781735149","ISBN:1405196831","GOC:add","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}


id: PATO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000335 variegated (obsolete PATO:0000335)","synonyms":[{"name":"mottled (sensu Drosophila)","type":"related"}],"termid":"PATO:0000335"}


id: FYPO:0003666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of crossover junction endodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal crossover junction endodeoxyribonuclease activity","termid":"FYPO:0003666"}


id: PBO:0054709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2118","termid":"PBO:0054709"}


id: PBO:0034131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_develops_from","termid":"PBO:0034131"}


id: PBO:0086080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to Tfs1p; transcription is activated by paralogous proteins Yrm1p and Yrr1p along with proteins involved in multidrug resistance; GFP-tagged protein localizes to the cytoplasm and nucleus","termid":"PBO:0086080"}


id: PBO:0078727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 3-1","termid":"PBO:0078727"}


id: FYPO:0002910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcribed regions during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at transcribed regions during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at transcribed regions during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to transcribed chromatin regions during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002910"}


id: GO:0046905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate -> 15-cis-phytoene + 2 diphosphate.","definition_xrefs":["RHEA:34479","PMID:12641468","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"15-cis-phytoene synthase activity","synonyms":[{"name":"phytoene synthase activity","type":"broad"}],"termid":"GO:0046905"}


id: GO:0061388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rate of cell growth","termid":"GO:0061388"}


id: GO:0051848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating symbiont cytokine networks, e.g. by secreting proteins that mimic cytokine receptors that act to sequester symbiont cytokines and inhibit action. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","gene_count":0,"genotype_count":0,"name":"obsolete active evasion of symbiont immune response via regulation of symbiont cytokine network (obsolete GO:0051848)","synonyms":[{"name":"active evasion of symbiont immune response via regulation of symbiont cytokine network","type":"exact"},{"name":"active immune evasion via modulation of symbiont cytokine network","type":"exact"},{"name":"active immune evasion via regulation of symbiont cytokine network","type":"exact"}],"termid":"GO:0051848"}


id: PBO:0003435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription termination factor (predicted)","termid":"PBO:0003435"}


id: PR:000050516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ssp2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC74.03c","termid":"PR:000050516"}


id: PBO:0068733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 4, pseudogene","termid":"PBO:0068733"}


id: PBO:0054854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2268","termid":"PBO:0054854"}


id: MOD:01683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-lysine residue with one methyl group.","definition_xrefs":["OMSSA:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-lysine","synonyms":[{"name":"Me1Lys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylk","type":"exact"}],"termid":"MOD:01683"}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: GO:0021507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the caudal opening of the neural tube. The posterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"posterior neuropore closure","termid":"GO:0021507"}


id: PBO:0071028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 30","termid":"PBO:0071028"}


id: PBO:0053915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1210","termid":"PBO:0053915"}


id: GO:1900257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of beta1-adrenergic receptor activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of beta1-adrenergic receptor activity (obsolete GO:1900257)","synonyms":[{"name":"down regulation of beta1 adrenoceptor","type":"exact"},{"name":"down regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"down-regulation of beta1 adrenoceptor","type":"exact"},{"name":"down-regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"downregulation of beta1 adrenoceptor","type":"exact"},{"name":"downregulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"inhibition of beta1 adrenoceptor","type":"exact"},{"name":"inhibition of beta1-adrenergic receptor activity","type":"narrow"},{"name":"negative regulation of beta1 adrenoceptor","type":"exact"}],"termid":"GO:1900257"}


id: PBO:0004640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ash2-trithorax family protein","termid":"PBO:0004640"}


id: PBO:0030657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation","termid":"PBO:0030657"}


id: PR:O74953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uri1 gene.","definition_xrefs":["UniProtKB:O74953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C736.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.07c","synonyms":[{"name":"Spom972h-uri1","type":"exact"}],"termid":"PR:O74953"}


id: PBO:0040325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1","termid":"PBO:0040325"}


id: FYPO:0006146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ion starvation and during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:24569997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during meiotic cell cycle","termid":"FYPO:0006976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"normal RNA accumulation during cellular response to copper ion starvation during meiotic cell cycle","type":"related"},{"name":"normal RNA level during meiotic cell cycle during copper starvation","type":"exact"},{"name":"normal cellular RNA level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"normal mRNA level during cellular response to copper ion starvation during meiotic cell cycle","type":"narrow"},{"name":"normal transcript level during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006146"}


id: PBO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 1 receptor","termid":"PBO:0043984"}


id: PBO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box R1","termid":"PBO:0047836"}


id: PBO:0108953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM69 pseudogene 1","termid":"PBO:0108953"}


id: GO:0099047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from invading foreign RNA.","definition_xrefs":["GO:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular RNA","termid":"GO:0099047"}


id: PBO:0057971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689d-1","termid":"PBO:0057971"}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: GO:1902211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prolactin signaling pathway.","definition_xrefs":["PMID:11773439","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"prolactin signaling pathway","termid":"GO:0038161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of prolactin signaling pathway","synonyms":[{"name":"regulation of PRL signaling pathway","type":"exact"},{"name":"regulation of prolactin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902211"}


id: PBO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf1","termid":"PBO:0018040"}


id: GO:1990960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of basophils such that the total number of basophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil homeostasis","synonyms":[{"name":"basophilic leucocyte homeostasis","type":"exact"}],"termid":"GO:1990960"}


id: PBO:0091848
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris-Related Protein 2","termid":"PBO:0091848"}


id: PBO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H70 (predicted)","termid":"PBO:0002578"}


id: PBO:0078456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 8","termid":"PBO:0078456"}


id: GO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8Z,11Z,14Z)-eicosatrienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (8Z,11Z,14Z,17Z)-eicosatetraenoyl-CoA) and add a fourth double bond (a (5Z,8Z,11Z,14Z,17Z)-eicosapentaenoyl-CoA).","definition_xrefs":["RHEA:46424","PMID:10601301","PMID:10769175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA delta5-desaturase activity","secondary_identifiers":["EC:1.14.19.44"],"synonyms":[{"name":"acyl-CoA (8-3)-desaturase","type":"exact"},{"name":"acyl-CoA D5-desaturase activity","type":"exact"},{"name":"acyl-CoA delta(5)-desaturase activity","type":"exact"}],"termid":"GO:0062076"}


id: PBO:0076303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 1","termid":"PBO:0076303"}


id: PBO:0065597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 13","termid":"PBO:0065597"}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: GO:0042161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of one or more amino acids or the lipid group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein modification","termid":"GO:0042160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein oxidation","termid":"GO:0042161"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.208","RHEA:23812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02548","MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: PR:P87154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase epsilon catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03630","PANTHER:PTHR10670:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.13c","secondary_identifiers":["UniProtKB:P87154"],"synonyms":[{"name":"DNA polymerase II subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLE","type":"exact"}],"termid":"PR:P87154"}


id: PBO:0040840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLCAP apoptosis inducing factor","termid":"PBO:0040840"}


id: PBO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline, mitochondrial","termid":"PBO:0005894"}


id: PR:Q9UTK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alm1 gene.","definition_xrefs":["UniProtKB:Q9UTK5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal long morphology protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.04c","synonyms":[{"name":"Sp8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alm1","type":"exact"}],"termid":"PR:Q9UTK5"}


id: PBO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition","termid":"PBO:0006715"}


id: PBO:0070268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 2A","termid":"PBO:0070268"}


id: FYPO:0002971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during telophase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during telophase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during telophase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic telophase","type":"exact"},{"name":"decreased protein localization to spindle pole body during telophase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during telophase","type":"exact"}],"termid":"FYPO:0002971"}


id: PBO:0029679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation","termid":"PBO:0029679"}


id: GO:0030845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway which proceeds with inhibition of phospholipase C (PLC) activity and a subsequent decrease in the levels of cellular inositol trisphosphate (IP3) and diacylglycerol (DAG).","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb","PMID:8280098","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-inhibiting G protein-coupled receptor signaling pathway","synonyms":[{"name":"G-protein-coupled inhibitory pathway of phospholipase C","type":"exact"},{"name":"GPCR signaling pathway coupled to inhibition of phospholipase C activity","type":"exact"},{"name":"GPCR signaling pathway via inhibition of PLC","type":"exact"},{"name":"PLC-inhibiting GPCR signaling pathway","type":"exact"},{"name":"inhibition of phospholipase C activity involved in G-protein coupled receptor signalling pathway","type":"narrow"},{"name":"phospholipase C inhibition","type":"related"},{"name":"phospholipase C-inhibiting G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0030845"}


id: PBO:0045023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 3","termid":"PBO:0045023"}


id: FYPO:0006714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular free fatty acid level","synonyms":[{"name":"increased cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"increased free fatty acid accumulation","type":"related"}],"termid":"FYPO:0006714"}


id: PBO:0038283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_comment","termid":"PBO:0038283"}


id: GO:0042772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes initiated in response to the detection of DNA damage, and resulting in the induction of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction resulting in transcription","termid":"GO:0042772"}


id: PBO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.19","termid":"PBO:0002640"}


id: GO:0009607
data:
  {"annotated_genes":["SJAG_04183","SJAG_01837","SJAG_04332","SJAG_00082","SJAG_04140","SJAG_01805","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89443,97878,85722,111931,106548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[99644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[97887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[97888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90168,97889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to biotic stress","type":"narrow"}],"termid":"GO:0009607","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:1902579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A localization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism localization (obsolete GO:1902579)","synonyms":[{"name":"multi organism localization","type":"exact"}],"termid":"GO:1902579"}


id: GO:0010384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall peptidoglycan, a group of glycoproteins that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall proteoglycan metabolic process","synonyms":[{"name":"cell wall proteoglycan metabolism","type":"exact"}],"termid":"GO:0010384"}


id: GO:0110065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic telomere clustering during interphase.","definition_xrefs":["GOC:vw","PMID:25778919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"interphase mitotic telomere clustering","termid":"GO:0120110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of interphase mitotic telomere clustering","synonyms":[{"name":"regulation of mitotic telomere clustering during interphase","type":"exact"}],"termid":"GO:0110065"}


id: GO:0061871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast migration","termid":"GO:0010764"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"},{"relation_name":"negatively_regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatic stellate cell migration","termid":"GO:0061871"}


id: GO:1990069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.","definition_xrefs":["PMID:21749899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal opening","termid":"GO:1990069"}


id: PBO:0091082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Dms1 ortholog, syntenic position (possible gene prediction error)","termid":"PBO:0091082"}


id: GO:0089710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a endocytic signal sequence, a specific peptide sequence, of 4-6 amino acids with an essential tyrosine (Y), found on cytoplasmic tails of some cell surface membrane proteins, which directs internalization by clathrin-coated pits.","definition_xrefs":["PMID:8918456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"endocytic targeting sequence binding","termid":"GO:0089710"}


id: GO:0061681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate and yields pyruvate and D-glyceraldehyde-3-phosphate.","definition_xrefs":["GOC:dph","MetaCyc:ENTNER-DOUFDOROFF-PWY-III","PMID:12921536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway through gluconate","termid":"GO:0061679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate to D-glyceraldehyde-3-phosphate","secondary_identifiers":["MetaCyc:PWY-2221"],"termid":"GO:0061681"}


id: PBO:0054253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1637","termid":"PBO:0054253"}


id: PBO:0076210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 20","termid":"PBO:0076210"}


id: PBO:0064085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein alpha","termid":"PBO:0064085"}


id: GO:0018711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl acetyl-CoA + CoA = acetyl-CoA + benzoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"benzoyl acetate-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-2006"],"termid":"GO:0018711"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: SO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds. Beta bulge loops often occur at the loop ends of beta-hairpins.","definition_xrefs":["Http://www.ebi.ac.uk/msd-srv/msdmotif/","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop","secondary_identifiers":["BS:00209"],"synonyms":[{"name":"beta bulge loop","type":"exact"}],"termid":"SO:0001108"}


id: PBO:0068908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 151, pseudogene","termid":"PBO:0068908"}


id: PBO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 6","termid":"PBO:0045950"}


id: FYPO:0007704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26443240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"decreased protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"decreased protein localization to cell side during glucose starvation","type":"related"},{"name":"decreased protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"decreased protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"decreased protein localization to lateral cortex during glucose starvation","type":"exact"},{"name":"reduced protein localization to lateral cell cortex during glucose starvation","type":"exact"}],"termid":"FYPO:0007704"}


id: FYPO:0001880
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[114650,114654,114643,114642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to cell division site","type":"exact"},{"name":"abolished protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cell division site during vegetative growth","type":"exact"},{"name":"abolished protein recruitment to cell division site","type":"related"},{"name":"protein localization to cell division site abolished","type":"exact"}],"termid":"FYPO:0001880","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: GO:0000395
data:
  {"annotated_genes":["SJAG_02279","SJAG_01654","SJAG_03983","SJAG_00058","SJAG_04911","SJAG_04163","SJAG_01301","SJAG_00147","SJAG_03469","SJAG_01870","SJAG_01015","SJAG_01440","SJAG_02843","SJAG_04214","SJAG_05009","SJAG_02304"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78234,87234,89636,90537,90785,91207,93410,98039,98197,101315,105439,105987,106001,107699,108595,110525],"is_not":false,"summary":null,"term":"GO:0000395"}]},"cv_name":"biological_process","definition":"Recognition of the intron 5'-splice site by components of the assembling spliceosome.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splice site recognition","termid":"GO:0006376"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044085","GO:0065003","GO:0016071"],"is_obsolete":false,"name":"mRNA 5'-splice site recognition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000369","GO:0000368"],"synonyms":[{"name":"U12-type nuclear mRNA 5' splice site recognition","type":"narrow"},{"name":"U12-type nuclear mRNA 5'-splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 5' splice site recognition","type":"narrow"},{"name":"U2-type nuclear mRNA 5'-splice site recognition","type":"narrow"},{"name":"nuclear mRNA 5' splice site recognition","type":"exact"},{"name":"nuclear mRNA 5'-splice site recognition","type":"exact"},{"name":"spliceosomal CC complex biosynthesis","type":"narrow"},{"name":"spliceosomal CC complex formation","type":"narrow"},{"name":"spliceosomal E complex biosynthesis","type":"narrow"},{"name":"spliceosomal E complex formation","type":"narrow"},{"name":"spliceosomal commitment complex biosynthesis","type":"narrow"},{"name":"spliceosomal commitment complex formation","type":"narrow"}],"termid":"GO:0000395","terms_by_termid":{"GO:0000395":null}}


id: PBO:0088979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Pfa3","termid":"PBO:0088979"}


id: PBO:0053858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1128","termid":"PBO:0053858"}


id: PBO:0086163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ribosomal large subunit maturation; functionally redundant with Ssf1p; member of the Brix family; SSF2 has a paralog, SSF1, that arose from the whole genome duplication","termid":"PBO:0086163"}


id: GO:0070221
data:
  {"annotated_genes":["SJAG_01239","SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75536,93826],"is_not":false,"summary":null,"term":"GO:0070221"}]},"cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfide:quinone oxidoreductase.","definition_xrefs":["MetaCyc:P222-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01239":null,"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation, using sulfide:quinone oxidoreductase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sulfide oxidation, using sulfide-quinone reductase","type":"exact"},{"name":"sulphide oxidation, using sulfide:quinone oxidoreductase","type":"exact"}],"termid":"GO:0070221","terms_by_termid":{"GO:0070221":null}}


id: GO:0032222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"}


id: PBO:0054112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1477","termid":"PBO:0054112"}


id: PBO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin B Six Uptake","termid":"PBO:0002111"}


id: GO:1905697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polysome binding.","definition_xrefs":["PMID:18426977","GOC:PARL","GOC:TermGenie","GOC:bc","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of polysome binding","termid":"GO:1905696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polysome binding","synonyms":[{"name":"down regulation of polyribosome binding","type":"exact"},{"name":"down regulation of polysome binding","type":"exact"},{"name":"down-regulation of polyribosome binding","type":"exact"},{"name":"down-regulation of polysome binding","type":"exact"},{"name":"downregulation of polyribosome binding","type":"exact"},{"name":"downregulation of polysome binding","type":"exact"},{"name":"inhibition of polyribosome binding","type":"narrow"},{"name":"inhibition of polysome binding","type":"narrow"},{"name":"negative regulation of polyribosome binding","type":"exact"}],"termid":"GO:1905697"}


id: PATO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates that the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"F minus mating type","termid":"PATO:0001348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high frequency recombinant","synonyms":[{"name":"Hfr","type":"exact"}],"termid":"PATO:0001349"}


id: GO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of an acetyl group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone acetylation (obsolete GO:0016573)","termid":"GO:0016573"}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: GO:0070372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["ISBN:0121245462","GOC:add","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"regulation of ERK cascade","type":"broad"},{"name":"regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"regulation of ERK1 cascade","type":"narrow"},{"name":"regulation of ERK1/2 cascade","type":"exact"},{"name":"regulation of ERK2 cascade","type":"narrow"},{"name":"regulation of MAPK1 cascade","type":"narrow"},{"name":"regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070372"}


id: GO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex consisting of Myb and other proteins that regulates site specific DNA replication, gene amplification and transcriptional repression.","definition_xrefs":["PMID:15545624","PMID:12490953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Myb complex","synonyms":[{"name":"Myeloblastosis proto-oncogene protein complex","type":"exact"}],"termid":"GO:0031523"}


id: GO:0009399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nitrogen is taken from its relatively inert molecular form (N2) in the atmosphere and converted into nitrogen compounds useful for other chemical processes, such as ammonia, nitrate and nitrogen dioxide.","definition_xrefs":["Wikipedia:Nitrogen_fixation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071941","GO:0008150"],"is_obsolete":false,"name":"nitrogen fixation","secondary_identifiers":["MetaCyc:N2FIX-PWY"],"termid":"GO:0009399"}


id: GO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"myofibril","secondary_identifiers":["Wikipedia:Myofibril"],"termid":"GO:0030016"}


id: PBO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad9","termid":"PBO:0001139"}


id: PBO:0055506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2940","termid":"PBO:0055506"}


id: GO:0140947
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105857],"is_not":false,"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6,N6-dimethyl-L-lysyl9-[histone H3] + S-adenosyl-L-methionine = H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the dimethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0008276","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H3K9me2 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.366"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone H3K9me2 methylase activity","type":"exact"},{"name":"histone dimethyl-lysine(H3K9) N-methyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140947","terms_by_termid":{"GO:0140947":null}}


id: GO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002589"}


id: GO:0090287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"}


id: GO:0048362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage metabolic process","synonyms":[{"name":"pedicel mucilage metabolism","type":"exact"}],"termid":"GO:0048362"}


id: FYPO:0007770
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114698],"is_not":false,"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery persists after the onset of mitosis. Normally, telomeres are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"},{"relation_name":"is_a","term_name":"increased heterochromatin tethering at nuclear periphery during mitosis","termid":"FYPO:0007769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased telomere tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased telomere anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007770","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: GO:0060226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the process in which a cell becomes committed to a retinal cone cell fate. Retinal cone cell fate commitment is the process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of photoreceptor cell differentiation","termid":"GO:0046533"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"}


id: PBO:0005078
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.1","termid":"PBO:0005078"}


id: GO:0060448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lung bud bifurcates.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in lung branching","synonyms":[{"name":"bud bifurcation involved in lung branching","type":"exact"}],"termid":"GO:0060448"}


id: PBO:0087974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trimethyl guanosine synthase, conserved nucleolar methyl transferase; converts the m(7)G cap structure of snRNAs, snoRNAs, and telomerase TLC1 RNA to m(2,2,7)G; also required for nucleolar assembly and splicing of meiotic pre-mRNAs; interacts with Swm2p, which may confer substrate specificity on Tgs1p","termid":"PBO:0087974"}


id: PBO:0015664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA replication ligase Cdc17","termid":"PBO:0015664"}


id: PBO:0065069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 1","termid":"PBO:0065069"}


id: PATO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A response quality inhering in a bearer by virtue of the bearer's excessive reaction to a stimulus or an agent.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"responsive to","termid":"PATO:0000487"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperresponsive to","synonyms":[{"name":"hyperresponsive","type":"exact"},{"name":"increased responsivity","type":"exact"}],"termid":"PATO:0001192"}


id: PBO:0081880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 827","termid":"PBO:0081880"}


id: PBO:0038499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 8","termid":"PBO:0038499"}


id: GO:0032401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a melanosome to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"},{"relation_name":"part_of","term_name":"melanosome localization","termid":"GO:0032400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of melanosome localization","synonyms":[{"name":"establishment of melanosome localisation","type":"exact"}],"termid":"GO:0032401"}


id: GO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving vitellogenin, and delivering vitellogenin into the cell via endocytosis.","definition_xrefs":["PMID:12429745","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"vitellogenin receptor activity","termid":"GO:0008196"}


id: PBO:0046462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphycan","termid":"PBO:0046462"}


id: PBO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 40","termid":"PBO:0052525"}


id: FYPO:0006315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation does not occur. Homologous chromosome segregation is the process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle.","definition_xrefs":["GO:0045143","PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished homologous chromosome segregation","synonyms":[{"name":"abolished chromosome segregation during meiosis I","type":"exact"},{"name":"homologous chromosome segregation abolished","type":"exact"}],"termid":"FYPO:0006315"}


id: GO:0032833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032830"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0032832"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","termid":"GO:0002298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"down regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"down-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"downregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"inhibition of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"narrow"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development involved in immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"negative regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0032833"}


id: GO:0102215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiocyanate + S-adenosyl-L-methionine = methyl thiocyanate + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"thiocyanate methyltransferase activity","secondary_identifiers":["RHEA:28014","MetaCyc:RXN-12189"],"termid":"GO:0102215"}


id: PBO:0051273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 4","termid":"PBO:0051273"}


id: PBO:0073344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 6","termid":"PBO:0073344"}


id: PR:O94322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C725.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.03","synonyms":[{"name":"Spom972h-SPBC725.03","type":"exact"}],"termid":"PR:O94322"}


id: PBO:0043099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 11","termid":"PBO:0043099"}


id: SO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Peptide nucleic acid, is a chemical not known to occur naturally but is artificially synthesized and used in some biological research and medical treatments. The PNA backbone is composed of repeating N-(2-aminoethyl)-glycine units linked by peptide bonds. The purine and pyrimidine bases are linked to the backbone by methylene carbonyl bonds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"PNA","termid":"SO:0001184"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Peptide_nucleic_acid"],"synonyms":[{"name":"PNA oligo","type":"exact"},{"name":"peptide nucleic acid","type":"exact"}],"termid":"SO:0001011"}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: PBO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr2 (predicted)","termid":"PBO:0005591"}


id: FYPO:0005088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains two nuclei and one or more septa, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15829570","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, binucleate septated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, binucleate septated cell","type":"exact"}],"termid":"FYPO:0005088"}


id: SO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the process of splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing_variant","secondary_identifiers":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"synonyms":[{"name":"Jannovar:splicing_variant","type":"exact"},{"name":"splicing variant","type":"exact"}],"termid":"SO:0001568"}


id: MOD:01518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01518"}


id: GO:0009772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic electron transport chain","termid":"GO:0009767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic electron transport in photosystem II","termid":"GO:0009772"}


id: PBO:0088822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Psk1","termid":"PBO:0088822"}


id: GO:1900699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"negatively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"down regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down regulation of o-orsellinic acid formation","type":"exact"},{"name":"down regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down-regulation of o-orsellinic acid formation","type":"exact"},{"name":"down-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"downregulation of o-orsellinic acid formation","type":"exact"},{"name":"downregulation of o-orsellinic acid synthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid anabolism","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"inhibition of o-orsellinic acid formation","type":"exact"},{"name":"inhibition of o-orsellinic acid synthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"negative regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid formation","type":"exact"},{"name":"negative regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900699"}


id: PBO:0072687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 3B","termid":"PBO:0072687"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: PBO:0070675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 46","termid":"PBO:0070675"}


id: GO:0045999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of ecdysteroid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ecdysteroid secretion","termid":"GO:0007555"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"negatively_regulates","term_name":"ecdysteroid secretion","termid":"GO:0045457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of ecdysteroid secretion","synonyms":[{"name":"down regulation of ecdysteroid secretion","type":"exact"},{"name":"down-regulation of ecdysteroid secretion","type":"exact"},{"name":"downregulation of ecdysteroid secretion","type":"exact"},{"name":"inhibition of ecdysteroid secretion","type":"narrow"}],"termid":"GO:0045999"}


id: GO:1990467
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76608],"is_not":false,"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A NuA3 complex that catalyzes the acetylation of Histone H3. In S. cerevisiae, this complex consists of Eaf6p, Nto1p, Sas3p, Taf14p, Yng1p and associates with H3K4me3 using Yng1p.","definition_xrefs":["PMID:25104842","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuA3 histone acetyltransferase complex","termid":"GO:0033100"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NuA3a histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990467","terms_by_termid":{"GO:1990467":null}}


id: PBO:0005512
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.6","termid":"PBO:0005512"}


id: GO:0004115
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77752],"is_not":false,"summary":null,"term":"GO:0004115"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-cyclic AMP + H2O = AMP + H+.","definition_xrefs":["GOC:ai","RHEA:25277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"3',5'-cyclic-AMP phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-5038","Reactome:R-HSA-111962","Reactome:R-HSA-9705507","Reactome:R-HSA-9708261","EC:3.1.4.53","Reactome:R-HSA-9629675","Reactome:R-HSA-418553","Reactome:R-HSA-9644869"],"synonyms":[{"name":"3',5' cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-AMP-specific phosphodiesterase activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-specific phosphodiesterase activity","type":"exact"},{"name":"cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"cyclic AMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0004115","terms_by_termid":{"GO:0004115":null}}


id: PBO:0075395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp8 transcription factor","termid":"PBO:0075395"}


id: GO:0071946
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97769],"is_not":false,"summary":null,"term":"GO:0071946"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that is initiated by protein binding to a binding site on the same chromosome, but remote from the termination site, via DNA looping or chromosome kissing.","definition_xrefs":["GOC:vw","PMID:20850009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"cis-acting DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cis acting DNA replication termination","type":"exact"}],"termid":"GO:0071946","terms_by_termid":{"GO:0071946":null}}


id: PBO:0027016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_catalytic_activity","termid":"PBO:0027016"}


id: PBO:0057911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3614","termid":"PBO:0057911"}


id: PBO:0059283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L40 pseudogene 1","termid":"PBO:0059283"}


id: GO:1904758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a new growing cell tip.","definition_xrefs":["PMID:19431238","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to growing cell tip","termid":"GO:1902486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to new growing cell tip","synonyms":[{"name":"protein localisation in new growing cell tip","type":"exact"},{"name":"protein localisation to new growing cell tip","type":"exact"},{"name":"protein localization in new growing cell tip","type":"exact"},{"name":"protein localization to new cell tip after activation of bipolar cell growth","type":"exact"},{"name":"protein localization to new growing cell end","type":"exact"},{"name":"protein localization to post-NETO new cell end","type":"exact"},{"name":"protein localization to post-NETO new cell tip","type":"exact"},{"name":"protein localization to post-new end take-off new cell tip","type":"exact"}],"termid":"GO:1904758"}


id: GO:0098863
data:
  {"annotated_genes":["SJAG_03073","SJAG_02509","SJAG_03673","SJAG_04003","SJAG_04387","SJAG_03835","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70861,74405,96961,102847,104999,109267,112189],"is_not":false,"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus by pushing forces exerted by polymerization of backward-extending microtubules.","definition_xrefs":["PMID:11309419","PMID:16611238","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"nuclear migration by microtubule mediated pushing forces","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098863","terms_by_termid":{"GO:0098863":null}}


id: PBO:0087823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (67 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087823"}


id: PBO:0085943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; nearly identical to Sno2p; expression is induced before the diauxic shift and also in the absence of thiamin","termid":"PBO:0085943"}


id: GO:0036012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the cyanelle envelope; also faces the cyanelle stroma.","definition_xrefs":["GOC:aa","PMID:18976493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid inner membrane","termid":"GO:0009528"},{"relation_name":"is_a","term_name":"cyanelle membrane","termid":"GO:0033113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle inner membrane","synonyms":[{"name":"cyanelle inner envelope membrane","type":"exact"}],"termid":"GO:0036012"}


id: FYPO:0003712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more Skb1-containing lateral cortical nodes than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"lateral cortical nodes present in increased numbers","synonyms":[{"name":"Skb1-containing cortical nodes present in increased numbers","type":"exact"},{"name":"additional lateral cortical nodes present during vegetative growth","type":"exact"},{"name":"extra lateral cortical nodes during vegetative growth","type":"exact"},{"name":"lateral cortical nodes present in greater numbers","type":"exact"},{"name":"lateral cortical nodes present in increased numbers during mitotic cell cycle","type":"related"},{"name":"lateral cortical nodes present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003712"}


id: GO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate of neuroblast proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroblast proliferation","synonyms":[{"name":"activation of neuroblast proliferation","type":"narrow"},{"name":"stimulation of neuroblast proliferation","type":"narrow"},{"name":"up regulation of neuroblast proliferation","type":"exact"},{"name":"up-regulation of neuroblast proliferation","type":"exact"},{"name":"upregulation of neuroblast proliferation","type":"exact"}],"termid":"GO:0002052"}


id: GO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of an antipodal cell, one of three cells of the embryo sac in angiosperms, found at the chalazal end of the embryo away from the point of entry of the pollen tube, and its descendents.","definition_xrefs":["CL:0000537","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"antipodal cell nucleus","termid":"GO:0043079"}


id: GO:0030185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitric oxide, nitrogen monoxide, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nitric oxide transport","termid":"GO:0030185"}


id: PBO:0029429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0029429"}


id: PBO:0072758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 8","termid":"PBO:0072758"}


id: GO:1904695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:TermGenie","PMID:22158624","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"is_a","term_name":"positive regulation of vasoconstriction","termid":"GO:0045907"},{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"activation of vascular smooth muscle contraction","type":"narrow"},{"name":"positive regulation of vascular smooth muscle contraction","type":"exact"},{"name":"up regulation of vascular smooth muscle contraction","type":"exact"},{"name":"up-regulation of vascular smooth muscle contraction","type":"exact"},{"name":"upregulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:1904695"}


id: PBO:0069990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1285, pseudogene","termid":"PBO:0069990"}


id: PBO:0004466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring protein Imp2","termid":"PBO:0004466"}


id: PR:Q10060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mso1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.05c","synonyms":[{"name":"Spom972h-mso1","type":"exact"}],"termid":"PR:Q10060"}


id: GO:1990858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.","definition_xrefs":["PMID:25996210","PMID:26306444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lectin","termid":"GO:1990840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lectin","termid":"GO:1990858"}


id: PBO:0074282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT2 intronic transcript 1","termid":"PBO:0074282"}


id: PBO:0046510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 4","termid":"PBO:0046510"}


id: PBO:0090937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component, with EF hand and WH2 motif Panl","termid":"PBO:0090937"}


id: PBO:0071370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 29","termid":"PBO:0071370"}


id: PBO:0080399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS29 retromer complex component","termid":"PBO:0080399"}


id: PBO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0004186"}


id: PR:Q9P332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC750.04c/SPAC977.02.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C750.04c/C977.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.02","synonyms":[{"name":"Spom972h-SPAC977.02","type":"exact"}],"termid":"PR:Q9P332"}


id: PR:O74718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sup35 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic peptide chain release factor GTP-binding subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.04","synonyms":[{"name":"ERF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ERF2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ERF3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sup35","type":"exact"},{"name":"polypeptide release factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation release factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74718"}


id: PBO:0029605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transporter_activity","termid":"PBO:0029605"}


id: PBO:0085720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric and mating-type locus silencing; interacts with Sir2p and also interacts with Gal11p, which is a component of the RNA pol II mediator complex; ESC8 has a paralog, IOC3, that arose from the whole genome duplication","termid":"PBO:0085720"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: GO:0033118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an esterosome. This membrane has characteristics of rough endoplasmic reticulum (RER) membranes.","definition_xrefs":["GOC:ecd","PMID:2307702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"esterosome membrane","termid":"GO:0033118"}


id: GO:0045194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oxidized low-density lipoproteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidized low-density lipoprotein catabolic process (obsolete GO:0045194)","synonyms":[{"name":"Ox-LDL catabolic process","type":"exact"},{"name":"Ox-LDL catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein breakdown","type":"exact"},{"name":"oxidized low-density lipoprotein catabolic process","type":"exact"},{"name":"oxidized low-density lipoprotein catabolism","type":"exact"},{"name":"oxidized low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045194"}


id: GO:1900038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to hypoxia","termid":"GO:1900037"},{"relation_name":"negatively_regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hypoxia","synonyms":[{"name":"down regulation of cellular response to hypoxia","type":"related"},{"name":"down regulation of cellular response to hypoxic stress","type":"exact"},{"name":"down regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"down-regulation of cellular response to hypoxia","type":"related"},{"name":"down-regulation of cellular response to hypoxic stress","type":"exact"},{"name":"down-regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"downregulation of cellular response to hypoxia","type":"related"},{"name":"downregulation of cellular response to hypoxic stress","type":"exact"},{"name":"downregulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"inhibition of cellular response to hypoxia","type":"related"},{"name":"inhibition of cellular response to hypoxic stress","type":"exact"},{"name":"inhibition of cellular response to lowered oxygen tension","type":"exact"},{"name":"negative regulation of cellular response to hypoxic stress","type":"exact"},{"name":"negative regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900038"}


id: GO:0035038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the haploid nucleus of the unfertilized egg.","definition_xrefs":["GOC:bf","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"female pronucleus assembly","termid":"GO:0035038"}


id: MOD:01154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid to pyruvic acid.","definition_xrefs":["PubMed:8464063","RESID:AA0127","PubMed:3042771","PubMed:10085076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.0-71.1 Da","termid":"MOD:00769"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01154"}


id: FYPO:0006615
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114619,114620],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a greater diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"increased cell diameter","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"single_locus_genotype_uniquenames":["rga6delta","rga4delta"],"synonyms":[{"name":"increased cell thickness","type":"exact"},{"name":"increased cell width","type":"exact"}],"termid":"FYPO:0006615","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1902703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butan-1-ol.","definition_xrefs":["PMID:18727018","GOC:TermGenie","PMID:19539744","GO_REF:0000093","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to butan-1-ol (obsolete GO:1902703)","synonyms":[{"name":"hexose breakdown to butan-1-ol","type":"exact"},{"name":"hexose catabolic process to 1-butanol","type":"exact"},{"name":"hexose catabolic process to butanol","type":"exact"},{"name":"hexose catabolism to butan-1-ol","type":"exact"},{"name":"hexose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902703"}


id: PBO:0076771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 10","termid":"PBO:0076771"}


id: GO:1905349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ciliary transition zone.","definition_xrefs":["PMID:26595381","GO_REF:0000079","PMID:21725307","GOC:cilia","PMID:24448408","PMID:26982032","GOC:TermGenie","PMID:23644468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ciliary transition zone assembly","synonyms":[{"name":"cilial transition zone assembly","type":"exact"},{"name":"cilial transition zone formation","type":"exact"},{"name":"ciliary transition zone formation","type":"exact"},{"name":"cilium transition zone assembly","type":"exact"},{"name":"cilium transition zone formation","type":"exact"}],"termid":"GO:1905349"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: FYPO:0006935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has normal volume, dimensions and shape, and is viable, when subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal cell morphology during nitrogen starvation","termid":"FYPO:0002048"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal cell morphology during nitrogen starvation","termid":"FYPO:0002048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable cell with normal cell morphology during nitrogen starvation","synonyms":[{"name":"small viable spherical cell during nitrogen starvation","type":"exact"},{"name":"viable cell with normal cell morphology during nitrogen depletion","type":"exact"},{"name":"viable cell with normal cell morphology during nitrogen deprivation","type":"exact"},{"name":"viable cell with normal cell shape and size during nitrogen starvation","type":"exact"},{"name":"viable cell with normal morphology during nitrogen starvation","type":"exact"},{"name":"viable orb during nitrogen starvation","type":"exact"},{"name":"viable round cells during nitrogen starvation","type":"related"},{"name":"viable rounded cell during nitrogen starvation","type":"related"},{"name":"viable rounded cells during nitrogen starvation","type":"related"},{"name":"viable spherical cell during nitrogen depletion","type":"exact"},{"name":"viable spherical cell during nitrogen deprivation","type":"exact"},{"name":"viable spherical cell during nitrogen starvation","type":"exact"},{"name":"viable spheroid cell during nitrogen depletion","type":"related"},{"name":"viable spheroid cell during nitrogen deprivation","type":"related"},{"name":"viable spheroid cell during nitrogen starvation","type":"related"}],"termid":"FYPO:0006935"}


id: FYPO:0002927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a polyadenylated RNA (poly(A)RNA) is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased poly(A) RNA binding","synonyms":[{"name":"decreased polyA RNA binding","type":"exact"},{"name":"decreased polyadenylated RNA binding","type":"exact"},{"name":"decreased protein-poly(A) RNA interaction","type":"exact"},{"name":"reduced poly(A) RNA binding","type":"exact"}],"termid":"FYPO:0002927"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: PBO:0081113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 3","termid":"PBO:0081113"}


id: GO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of natural killer cell tolerance induction","termid":"GO:0002871"},{"relation_name":"positively_regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell tolerance induction","synonyms":[{"name":"activation of natural killer cell tolerance induction","type":"narrow"},{"name":"positive regulation of NK cell tolerance induction","type":"exact"},{"name":"stimulation of natural killer cell tolerance induction","type":"narrow"},{"name":"up regulation of natural killer cell tolerance induction","type":"exact"},{"name":"up-regulation of natural killer cell tolerance induction","type":"exact"},{"name":"upregulation of natural killer cell tolerance induction","type":"exact"}],"termid":"GO:0002873"}


id: PBO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 15-1","termid":"PBO:0052915"}


id: PBO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 9","termid":"PBO:0070830"}


id: PBO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 5 (putative)","termid":"PBO:0072672"}


id: GO:1905869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["PMID:19737525","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"negatively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071","GO:0044248"],"is_obsolete":false,"name":"negative regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"down regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"down-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"downregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"inhibition of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"inhibition of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"negative regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905869"}


id: GO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0045846"],"synonyms":[{"name":"activation of natural killer cell mediated immunity","type":"narrow"},{"name":"positive regulation of NK cell activity","type":"related"},{"name":"positive regulation of NK cell mediated immunity","type":"exact"},{"name":"positive regulation of natural killer cell activity","type":"related"},{"name":"stimulation of natural killer cell mediated immunity","type":"narrow"},{"name":"up regulation of natural killer cell mediated immunity","type":"exact"},{"name":"up-regulation of natural killer cell mediated immunity","type":"exact"},{"name":"upregulation of natural killer cell mediated immunity","type":"exact"}],"termid":"GO:0002717"}


id: GO:0032670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-26 production","secondary_identifiers":["GO:0045530"],"synonyms":[{"name":"regulation of IL-26 production","type":"exact"},{"name":"regulation of interleukin-26 biosynthetic process","type":"narrow"}],"termid":"GO:0032670"}


id: GO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex of BRCA2 and BRAF35 (BRCA2-associated factor 35). The BRCA2-BRAF35 complex is often associated with condensed chromatin during mitosis.","definition_xrefs":["PMID:11207365","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA2-BRAF35 complex","termid":"GO:0002111"}


id: GO:0038136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors ERBB3 and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16460914","GOC:signaling","Reactome:R-HSA-1977958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB3-ERBB4 signaling pathway","synonyms":[{"name":"ERBB3-ERBB4 signalling pathway","type":"exact"},{"name":"HER3-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038136"}


id: PBO:0060918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 5","termid":"PBO:0060918"}


id: PBO:0040350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g","termid":"PBO:0040350"}


id: PBO:0084565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane glycoprotein v-SNARE; involved in retrograde transport from the Golgi to the endoplasmic reticulum (ER); required for N- and O-glycosylation in the Golgi but not in the ER and for efficient nuclear fusion during mating; mediates Sey1p-independent homotypic ER fusion; interacts with the Dsl1p complex through Tip20p","termid":"PBO:0084565"}


id: PR:O42997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27B12.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.07","synonyms":[{"name":"Spom972h-SPBC27B12.07","type":"exact"}],"termid":"PR:O42997"}


id: FYPO:0004633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during meiosis II","synonyms":[{"name":"decreased protein kinase activity during second meiotic nuclear division","type":"exact"},{"name":"reduced protein kinase activity during meiosis II","type":"exact"}],"termid":"FYPO:0004633"}


id: PBO:0080015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 1","termid":"PBO:0080015"}


id: PBO:0040012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 1","termid":"PBO:0040012"}


id: GO:1900234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Kit signaling pathway","synonyms":[{"name":"regulation of Kit signalling pathway","type":"exact"},{"name":"regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"regulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900234"}


id: PBO:0091420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD binding dehydrogenase family protein, human DHDH ortholog, unknown biological role, implicated in carbohydrate metabolic process","termid":"PBO:0091420"}


id: GO:1904972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral translation.","definition_xrefs":["PMID:19666601","GOC:TermGenie","GOC:bhm","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"regulation of viral translation","termid":"GO:1904971"},{"relation_name":"negatively_regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral translation","synonyms":[{"name":"down regulation of viral protein anabolism","type":"exact"},{"name":"down regulation of viral protein biosynthesis","type":"exact"},{"name":"down regulation of viral protein biosynthetic process","type":"exact"},{"name":"down regulation of viral protein formation","type":"exact"},{"name":"down regulation of viral protein synthesis","type":"exact"},{"name":"down regulation of viral translation","type":"exact"},{"name":"down-regulation of viral protein anabolism","type":"exact"},{"name":"down-regulation of viral protein biosynthesis","type":"exact"},{"name":"down-regulation of viral protein biosynthetic process","type":"exact"},{"name":"down-regulation of viral protein formation","type":"exact"},{"name":"down-regulation of viral protein synthesis","type":"exact"},{"name":"down-regulation of viral translation","type":"exact"},{"name":"downregulation of viral protein anabolism","type":"exact"},{"name":"downregulation of viral protein biosynthesis","type":"exact"},{"name":"downregulation of viral protein biosynthetic process","type":"exact"},{"name":"downregulation of viral protein formation","type":"exact"},{"name":"downregulation of viral protein synthesis","type":"exact"},{"name":"downregulation of viral translation","type":"exact"},{"name":"inhibition of viral protein anabolism","type":"narrow"},{"name":"inhibition of viral protein biosynthesis","type":"narrow"},{"name":"inhibition of viral protein biosynthetic process","type":"narrow"},{"name":"inhibition of viral protein formation","type":"narrow"},{"name":"inhibition of viral protein synthesis","type":"narrow"},{"name":"inhibition of viral translation","type":"narrow"},{"name":"negative regulation of viral protein anabolism","type":"exact"},{"name":"negative regulation of viral protein biosynthesis","type":"exact"},{"name":"negative regulation of viral protein biosynthetic process","type":"exact"},{"name":"negative regulation of viral protein formation","type":"exact"},{"name":"negative regulation of viral protein synthesis","type":"exact"}],"termid":"GO:1904972"}


id: GO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075088)","synonyms":[{"name":"positive regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075088"}


id: FYECO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin","termid":"FYECO:0000395"}


id: PBO:0062030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily S member 1 pseudogene","termid":"PBO:0062030"}


id: PBO:0069524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 793, pseudogene","termid":"PBO:0069524"}


id: PBO:0046700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 pseudogene 1","termid":"PBO:0046700"}


id: GO:0102729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 6-oxocampestanol + O2 + NADPH = cathasterone + H2O + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-oxocampestanol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-715"],"termid":"GO:0102729"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: FYPO:0000551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pseudohyphal growth does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pseudohyphal growth","termid":"FYPO:0000550"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"pseudohyphal growth abolished","secondary_identifiers":["FYPO:0000436"],"synonyms":[{"name":"abolished filamentous growth","type":"broad"},{"name":"abolished pseudohyphal growth","type":"exact"},{"name":"absent filamentous growth","type":"broad"},{"name":"absent pseudohyphal growth","type":"exact"},{"name":"filamentous growth abolished","type":"broad"},{"name":"filamentous growth: absent","type":"broad"},{"name":"pseudohyphal growth: absent","type":"related"}],"termid":"FYPO:0000551"}


id: PBO:0056960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 21","termid":"PBO:0056960"}


id: PBO:0050942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 13","termid":"PBO:0050942"}


id: PBO:0079426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 9","termid":"PBO:0079426"}


id: PBO:0065683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 regulator of sister chromatid separation, securin","termid":"PBO:0065683"}


id: GO:0046262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nitrotoluene, any methylbenzene molecule with NO2 group(s) attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrotoluene biosynthetic process (obsolete GO:0046262)","synonyms":[{"name":"nitrotoluene anabolism","type":"exact"},{"name":"nitrotoluene biosynthesis","type":"exact"},{"name":"nitrotoluene biosynthetic process","type":"exact"},{"name":"nitrotoluene formation","type":"exact"},{"name":"nitrotoluene synthesis","type":"exact"}],"termid":"GO:0046262"}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_01410","SJAG_02079","SJAG_04530","SJAG_02267","SJAG_03221","SJAG_01708","SJAG_02708","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72054,91764,74480,97690,74996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[77364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[105667,103091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["PMID:27113759","GOC:pg","PMID:27233470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: PBO:0048952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 3","termid":"PBO:0048952"}


id: GO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of mucosal-associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucosa-associated lymphoid tissue development","synonyms":[{"name":"BALT development","type":"narrow"},{"name":"GALT development","type":"narrow"},{"name":"NALT development","type":"narrow"},{"name":"bronchial-associated lymphoid tissue development","type":"narrow"},{"name":"gut-associated lymphoid tissue development","type":"narrow"},{"name":"mucosal-associated lymphoid tissue development","type":"exact"},{"name":"nasopharyngeal-associated lymphoid tissue development","type":"narrow"}],"termid":"GO:0048537"}


id: PBO:0064772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 3","termid":"PBO:0064772"}


id: GO:0015213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of uridine, uracil riboside, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"uridine transmembrane transporter activity","synonyms":[{"name":"uracil/uridine permease activity","type":"narrow"}],"termid":"GO:0015213"}


id: PBO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3321 family","termid":"PBO:0000313"}


id: GO:0035322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another that will contribute to the formation of a limb bud.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"mesenchyme migration involved in limb bud formation","termid":"GO:0090496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration involved in limb bud formation","termid":"GO:0035322"}


id: GO:0090491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.","definition_xrefs":["KEGG_REACTION:R09584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)","termid":"GO:0090491"}


id: GO:0045576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation","termid":"GO:0045576"}


id: PBO:0068003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 305","termid":"PBO:0068003"}


id: GO:0140164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Golgi transport complex, a multisubunit tethering complex of the CATCHR family.","definition_xrefs":["GOC:ha","PMID:28100664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Golgi transport complex binding","synonyms":[{"name":"COG complex binding","type":"exact"}],"termid":"GO:0140164"}


id: PBO:0079695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 3","termid":"PBO:0079695"}


id: GO:0015518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: arabinose(out) + H+(out) = arabinose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"arabinose:proton symporter activity","secondary_identifiers":["GO:0015523"],"synonyms":[{"name":"arabinose efflux permease activity","type":"broad"},{"name":"arabinose efflux transmembrane transporter activity","type":"broad"},{"name":"arabinose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015518"}


id: GO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-NFAT signaling cascade","termid":"GO:0070884"},{"relation_name":"is_a","term_name":"negative regulation of calcineurin-mediated signaling","termid":"GO:0106057"},{"relation_name":"negatively_regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051534"],"synonyms":[{"name":"down regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"down-regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"downregulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"inhibition of NFAT protein import into nucleus","type":"narrow"},{"name":"inhibition of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"negative regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"negative regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"negative regulation of calcineurin-NFAT signalling cascade","type":"exact"},{"name":"termination of calcineurin-NFAT signaling cascade","type":"narrow"}],"termid":"GO:0070885"}


id: PBO:0046664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen receptor 2","termid":"PBO:0046664"}


id: GO:0043365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dihydroflavodoxin + [formate C-acetyltransferase]-glycine = 5'-deoxyadenosine + L-methionine + flavodoxin semiquinone + [formate C-acetyltransferase]-glycin-2-yl radical.","definition_xrefs":["EC:1.97.1.4","GOC:jl","PMID:18307109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-radical enzyme activating activity","termid":"GO:0043364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"[formate-C-acetyltransferase]-activating enzyme activity","secondary_identifiers":["GO:0008862","MetaCyc:TDCEACT-RXN","RHEA:19225"],"synonyms":[{"name":"PFL activase activity","type":"related"},{"name":"PFL-glycine:S-adenosyl-L-methionine H transferase (flavodoxin-oxidizing, S-adenosyl-L-methionine-cleaving) activity","type":"related"},{"name":"[pyruvate formate-lyase]-activating enzyme activity","type":"related"},{"name":"formate C-acetyltransferase-glycine dihydroflavodoxin:S-adenosyl-L-methionine oxidoreductase (S-adenosyl-L-methionine cleaving)","type":"related"},{"name":"formate acetyltransferase activating enzyme activity","type":"related"},{"name":"formate acetyltransferase-glycine dihydroflavodoxin:S-adenosyl-L-methionine oxidoreductase (S-adenosyl-L-methionine cleaving) activity","type":"related"},{"name":"formate-C-acetyltransferase-activating enzyme","type":"related"},{"name":"pyruvate formate-lyase-activating enzyme","type":"related"}],"termid":"GO:0043365"}


id: GO:0008318
data:
  {"annotated_genes":["SJAG_04434","SJAG_04923","SJAG_03810","SJAG_02583","SJAG_03029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73476,71281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[73169,71280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004660"},{"annotations":[73363,96921,77672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein prenyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008244"],"termid":"GO:0008318","terms_by_termid":{"GO:0004660":null,"GO:0004662":null,"GO:0004663":null}}


id: PR:P34068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:MSY","UniProtKB:P34068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm1","termid":"PR:000025003"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"Spom972h-mfm1","type":"exact"}],"termid":"PR:P34068"}


id: PBO:0067501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 638, pseudogene","termid":"PBO:0067501"}


id: FYPO:0005931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the silent mating-type cassettes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:24662054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at silent mating-type cassette","synonyms":[{"name":"decreased nucleosome occupancy at mating-type region heterochromatin","type":"exact"},{"name":"decreased nucleosome occupancy at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in silent mating-type cassette","type":"exact"},{"name":"reduced nucleosome occupancy at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0005931"}


id: GO:0010710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen catabolic process","synonyms":[{"name":"regulation of collagen breakdown","type":"exact"},{"name":"regulation of collagen catabolism","type":"exact"},{"name":"regulation of collagen degradation","type":"exact"}],"termid":"GO:0010710"}


id: PBO:0030065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoglycerate_mutase_activity","termid":"PBO:0030065"}


id: PR:Q9Y7R4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone-lysine N-methyltransferase SETD1B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-4 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.04c","secondary_identifiers":["UniProtKB:Q9Y7R4"],"synonyms":[{"name":"COMPASS component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SET domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC306.04c","type":"related"},{"name":"Set1C component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SETD1B","type":"exact"},{"name":"Spset1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kmt2","type":"related"},{"name":"lysine N-methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"set1 complex component set1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R4"}


id: GO:1903330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of iron-sulfur cluster assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"negatively_regulates","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"negative regulation of iron-sulfur cluster assembly","synonyms":[{"name":"down regulation of iron-sulfur cluster assembly","type":"exact"},{"name":"down regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"down regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"down-regulation of iron-sulfur cluster assembly","type":"exact"},{"name":"down-regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"down-regulation of iron-sulphur cluster assembly","type":"exact"},{"name":"downregulation of iron-sulfur cluster assembly","type":"exact"},{"name":"downregulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"downregulation of iron-sulphur cluster assembly","type":"exact"},{"name":"inhibition of iron-sulfur cluster assembly","type":"narrow"},{"name":"inhibition of iron-sulfur cluster biosynthesis","type":"related"},{"name":"inhibition of iron-sulphur cluster assembly","type":"narrow"},{"name":"negative regulation of iron-sulfur cluster biosynthesis","type":"related"},{"name":"negative regulation of iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:1903330"}


id: PBO:0013438
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe FLocculin","termid":"PBO:0013438"}


id: PBO:0084869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S19 ribosomal protein","termid":"PBO:0084869"}


id: PBO:0050736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 22","termid":"PBO:0050736"}


id: GO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lysine 5,6-aminomutase activity (obsolete GO:0047702)","synonyms":[{"name":"b-lysine 5,6-aminomutase activity","type":"exact"}],"termid":"GO:0047702"}


id: PBO:0029821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_cells,_abnormal_cell_shape_(obsolete_FYPO:0002416)","termid":"PBO:0029821"}


id: PBO:0058417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4786","termid":"PBO:0058417"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: GO:1900311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose metabolic process","termid":"GO:1900309"},{"relation_name":"positively_regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of maltoheptaose metabolic process","synonyms":[{"name":"activation of maltoheptaose metabolic process","type":"narrow"},{"name":"activation of maltoheptaose metabolism","type":"narrow"},{"name":"positive regulation of maltoheptaose metabolism","type":"exact"},{"name":"up regulation of maltoheptaose metabolic process","type":"exact"},{"name":"up regulation of maltoheptaose metabolism","type":"exact"},{"name":"up-regulation of maltoheptaose metabolic process","type":"exact"},{"name":"up-regulation of maltoheptaose metabolism","type":"exact"},{"name":"upregulation of maltoheptaose metabolic process","type":"exact"},{"name":"upregulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900311"}


id: GO:1901033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"positive regulation of response to oxidative stress","termid":"GO:1902884"},{"relation_name":"positively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to reactive oxygen species","synonyms":[{"name":"activation of response to AOS","type":"exact"},{"name":"activation of response to ROI","type":"exact"},{"name":"activation of response to ROS","type":"exact"},{"name":"activation of response to active oxygen species","type":"exact"},{"name":"activation of response to reactive oxidative species","type":"exact"},{"name":"activation of response to reactive oxygen intermediate","type":"exact"},{"name":"activation of response to reactive oxygen species","type":"narrow"},{"name":"positive regulation of response to AOS","type":"exact"},{"name":"positive regulation of response to ROI","type":"exact"},{"name":"positive regulation of response to ROS","type":"exact"},{"name":"positive regulation of response to active oxygen species","type":"exact"},{"name":"positive regulation of response to reactive oxidative species","type":"exact"},{"name":"positive regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"up regulation of response to AOS","type":"exact"},{"name":"up regulation of response to ROI","type":"exact"},{"name":"up regulation of response to ROS","type":"exact"},{"name":"up regulation of response to active oxygen species","type":"exact"},{"name":"up regulation of response to reactive oxidative species","type":"exact"},{"name":"up regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"up regulation of response to reactive oxygen species","type":"exact"},{"name":"up-regulation of response to AOS","type":"exact"},{"name":"up-regulation of response to ROI","type":"exact"},{"name":"up-regulation of response to ROS","type":"exact"},{"name":"up-regulation of response to active oxygen species","type":"exact"},{"name":"up-regulation of response to reactive oxidative species","type":"exact"},{"name":"up-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"up-regulation of response to reactive oxygen species","type":"exact"},{"name":"upregulation of response to AOS","type":"exact"},{"name":"upregulation of response to ROI","type":"exact"},{"name":"upregulation of response to ROS","type":"exact"},{"name":"upregulation of response to active oxygen species","type":"exact"},{"name":"upregulation of response to reactive oxidative species","type":"exact"},{"name":"upregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"upregulation of response to reactive oxygen species","type":"exact"}],"termid":"GO:1901033"}


id: PR:O14091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sut1 gene.","definition_xrefs":["UniProtKB:O14091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general alpha-glucoside permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.08","synonyms":[{"name":"Spom972h-sut1","type":"exact"}],"termid":"PR:O14091"}


id: PBO:0075619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepiapterin reductase","termid":"PBO:0075619"}


id: GO:0086080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex contributing to the adhesion of two different types of cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion mediator activity","termid":"GO:0098632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0098631","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}


id: PBO:0087737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; homologous to S. pombe rad18","termid":"PBO:0087737"}


id: PBO:0055094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2512","termid":"PBO:0055094"}


id: PBO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 1","termid":"PBO:0060937"}


id: FYPO:0000421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis does not occur. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level in plasma membrane","termid":"FYPO:0003504"},{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished endocytosis during vegetative growth","synonyms":[{"name":"abolished actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"abolished endocytosis during mitotic cell cycle","type":"related"},{"name":"abolished protein internalization during vegetative growth","type":"narrow"},{"name":"absent endocytosis during vegetative growth","type":"exact"},{"name":"endocytosis abolished during vegetative growth","type":"exact"},{"name":"endocytosis: absent during vegetative growth","type":"related"}],"termid":"FYPO:0000421"}


id: PBO:0060607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCBP2 antisense RNA 1","termid":"PBO:0060607"}


id: PBO:0029289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_G0","termid":"PBO:0029289"}


id: PBO:0064947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulation associated lncRNA","termid":"PBO:0064947"}


id: PR:P40388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uvi15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein uvi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.04","synonyms":[{"name":"Spom972h-uvi15","type":"exact"}],"termid":"PR:P40388"}


id: PBO:0086905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ubiquitin-specific protease; concentrates at the bud neck; UBP5 has a paralog, DOA4, that arose from the whole genome duplication","termid":"PBO:0086905"}


id: PBO:0029041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation_index_in_stationary_phase","termid":"PBO:0029041"}


id: PBO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4 (predicted)","termid":"PBO:0001169"}


id: SO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR bordered by the terminal and initial codons of two CDSs in a polycistronic transcript. Every UTR is either 5', 3' or internal.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_UTR","synonyms":[{"name":"internal UTR","type":"exact"}],"termid":"SO:0000241"}


id: PR:O14323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.08","synonyms":[{"name":"Spom972h-mcp4","type":"exact"},{"name":"meiotically up-regulated gene 101 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14323"}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: PBO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phenotype","termid":"PBO:0031115"}


id: GO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin D receptor activity","synonyms":[{"name":"PGD receptor activity","type":"related"},{"name":"PGD(2) receptor activity","type":"exact"}],"termid":"GO:0004956"}


id: GO:1900701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of orcinol biosynthetic process","synonyms":[{"name":"regulation of orcinol anabolism","type":"exact"},{"name":"regulation of orcinol biosynthesis","type":"exact"},{"name":"regulation of orcinol formation","type":"exact"},{"name":"regulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900701"}


id: PBO:0055466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2899","termid":"PBO:0055466"}


id: GO:0018467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + H2O + NAD+ = formate + 2 H+ + NADH.","definition_xrefs":["RHEA:16425","EC:1.2.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formaldehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:FORMALDEHYDE-DEHYDROGENASE-RXN","KEGG_REACTION:R00604","UM-BBD_reactionID:r0240"],"synonyms":[{"name":"formaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"glutathione-independent formaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018467"}


id: PBO:0072796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 2","termid":"PBO:0072796"}


id: PBO:0067812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 114","termid":"PBO:0067812"}


id: FYPO:0006943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' RNA helicase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal 3'-5' RNA helicase activity","termid":"FYPO:0006943"}


id: PBO:0072836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 divergent transcript","termid":"PBO:0072836"}


id: PBO:0067131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 178, pseudogene","termid":"PBO:0067131"}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: PBO:0003181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1/Mcp6","termid":"PBO:0003181"}


id: PBO:0069295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 551, pseudogene","termid":"PBO:0069295"}


id: FYPO:0004742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing at centromere","termid":"FYPO:0002360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at centromere outer repeat","synonyms":[{"name":"normal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"normal chromatin silencing at centromere otr","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"normal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin silencing at pericentric region","type":"related"},{"name":"normal chromatin silencing at pericentromeric region","type":"related"},{"name":"normal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"normal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0004742"}


id: GO:0050571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-glucitol + NADP+ = 1,5-anhydro-D-fructose + H+ + NADPH.","definition_xrefs":["RHEA:20665","EC:1.1.1.263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose reductase activity","secondary_identifiers":["KEGG_REACTION:R05682","MetaCyc:1.1.1.263-RXN"],"synonyms":[{"name":"1,5-anhydro-D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"AF reductase activity","type":"related"}],"termid":"GO:0050571"}


id: PBO:0088947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1","termid":"PBO:0088947"}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: PBO:0060267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 1","termid":"PBO:0060267"}


id: PBO:0063549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEDS1-UBE2V1 readthrough","termid":"PBO:0063549"}


id: PBO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1","termid":"PBO:0048473"}


id: GO:0098923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an soluble gas ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by soluble gas","termid":"GO:0098923"}


id: PBO:0082073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoserine aminotransferase; catalyzes the formation of phosphoserine from 3-phosphohydroxypyruvate, required for serine and glycine biosynthesis; regulated by the general control of amino acid biosynthesis mediated by Gcn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082073"}


id: PBO:0041476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 65","termid":"PBO:0041476"}


id: PBO:0032704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0032704"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: PBO:0047885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q21)","termid":"PBO:0047885"}


id: PR:Q9C1W8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.07c","synonyms":[{"name":"Spom972h-SPBC713.07c","type":"exact"}],"termid":"PR:Q9C1W8"}


id: PBO:0056445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 18","termid":"PBO:0056445"}


id: PBO:0077198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 4 L six family member 4","termid":"PBO:0077198"}


id: PBO:0069182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 436, pseudogene","termid":"PBO:0069182"}


id: PBO:0084120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme-binding protein; involved in regulation of cytochrome P450 protein Erg11p; damage response protein, related to mammalian membrane progesterone receptors; mutations lead to defects in telomeres, mitochondria, and sterol synthesis","termid":"PBO:0084120"}


id: PBO:0056053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor","termid":"PBO:0056053"}


id: PBO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 21","termid":"PBO:0045571"}


id: PBO:0046506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 2","termid":"PBO:0046506"}


id: GO:0098775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assembly of curli, extracellular fibers produced by enteric bacteria. This process occurs outside the cell, where it is coupled to secretion across the cell outer membrane via nucleation by elements of the transporter complex.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"curli assembly","termid":"GO:0098775"}


id: PBO:0012857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-5' exoribonuclease, PH-like Mtr3","termid":"PBO:0012857"}


id: FYPO:0001703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is normal (i.e. indistinguishable from wild type). A cell cycle checkpoint controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events.","definition_xrefs":["GO:0007093","PomBase:mah","GO:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000631","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle checkpoint","synonyms":[{"name":"normal cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001703"}


id: GO:0048694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an injured axon.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of injured axon","termid":"GO:0048693"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of injured axon","termid":"GO:0048674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of injured axon","synonyms":[{"name":"activation of collateral sprouting of injured axon","type":"narrow"},{"name":"stimulation of collateral sprouting of injured axon","type":"narrow"},{"name":"up regulation of collateral sprouting of injured axon","type":"exact"},{"name":"up-regulation of collateral sprouting of injured axon","type":"exact"},{"name":"upregulation of collateral sprouting of injured axon","type":"exact"}],"termid":"GO:0048694"}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_00888","SJAG_05926"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98641,109654],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["PMID:22388736","PMID:12665594","PMID:16314458","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: PR:O60103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase MARCH6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04016","PANTHER:PTHR13145:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase doa10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.07","secondary_identifiers":["UniProtKB:O60103"],"synonyms":[{"name":"Spom972h-MARCH6","type":"exact"}],"termid":"PR:O60103"}


id: PR:P87111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10617:SF1","OMA:SCHPO00565","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.04c","secondary_identifiers":["UniProtKB:P87111"],"synonyms":[{"name":"ETF dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ETF-QO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ETF-ubiquinone oxidoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ETFDH","type":"exact"},{"name":"electron-transferring-flavoprotein dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87111"}


id: FYPO:0000834
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114525,114523,114524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell differs from normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"altered protein level","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein level","type":"exact"},{"name":"altered cellular protein level","type":"exact"},{"name":"protein/peptide accumulation: abnormal","type":"related"}],"termid":"FYPO:0000834","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 3","termid":"PBO:0050035"}


id: FYPO:0007645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome segregation is abnormal during one or both of the cell divisions that a cell undergoes prior to entering quiescence (G0).","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromosome segregation during G1 to G0 transition","synonyms":[{"name":"abnormal chromosome segregation during G1/G0 transition","type":"exact"},{"name":"abnormal chromosome segregation during establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0007645"}


id: PBO:0067973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 275","termid":"PBO:0067973"}


id: PBO:0090126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator","termid":"PBO:0090126"}


id: GO:0004049
data:
  {"annotated_genes":["SJAG_01455","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98979,109955],"is_not":false,"summary":null,"term":"GO:0004049"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate + L-glutamine = anthranilate + pyruvate + L-glutamate.","definition_xrefs":["EC:4.1.3.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"anthranilate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ANTHRANSYN-RXN","RHEA:21732"],"synonyms":[{"name":"anthranilate synthetase activity","type":"related"},{"name":"chorismate pyruvate-lyase (amino-accepting) activity","type":"related"}],"termid":"GO:0004049","terms_by_termid":{"GO:0004049":null}}


id: GO:1900520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to pullulan.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to pullulan","termid":"GO:1900518"},{"relation_name":"positively_regulates","term_name":"response to pullulan","termid":"GO:0044592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to pullulan","synonyms":[{"name":"activation of response to pullulan","type":"narrow"},{"name":"up regulation of response to pullulan","type":"exact"},{"name":"up-regulation of response to pullulan","type":"exact"},{"name":"upregulation of response to pullulan","type":"exact"}],"termid":"GO:1900520"}


id: PBO:0078348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 14-1","termid":"PBO:0078348"}


id: GO:0061224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mesonephric glomerulus over time from its initial formation until its mature state. The mesonephric glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the mature vertebrate kidney, or mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerulus development","termid":"GO:0061224"}


id: FYPO:0004389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid catabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid catabolism RNAs are transcribed from genes whose products are involved in amino acid catabolism.","definition_xrefs":["PomBase:mah","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid metabolism gene mRNA during vegetative growth","termid":"FYPO:0002743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of amino acid catabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid catabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid catabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid catabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid catabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004389"}


id: GO:1903553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["GO_REF:0000058","PMID:24105262","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of extracellular exosome assembly","termid":"GO:1903551"},{"relation_name":"positively_regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular exosome assembly","synonyms":[{"name":"activation of extracellular vesicular exosome assembly","type":"narrow"},{"name":"positive regulation of extracellular vesicular exosome assembly","type":"related"},{"name":"up regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"up-regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"upregulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903553"}


id: GO:0097417
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic, ball-like inclusion resembling a nucleolus and consisting of a convoluted network of electron-opaque strands embedded in a less dense matrix. It measures approximately 0.9 microns and lacks a limiting membrane. Its strands (diameter = 400-600 A) appear to be made of an entanglement of tightly packed filaments and particles approximately 25-50 A thick. Cytochemical studies suggest the presence of nonhistone proteins and some RNA. Usually only one such structure is present in a cell, and it appears to occur in most ganglion cells. Although they can be seen anywhere in the cell body, nematosomes are typically located in the perinuclear cytoplasm, where they are often associated with smooth-surfaced and coated vesicles.","definition_xrefs":["PMID:5458990","NIF_Subcellular:sao138430598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nematosome","termid":"GO:0097417"}


id: PBO:0027419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_Golgi_apparatus,_with_protein_mislocalized_to_endoplasmic_reticulum","termid":"PBO:0027419"}


id: GO:0052488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052488)","synonyms":[{"name":"negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor-induced symbiont innate immunity","type":"exact"},{"name":"suppression of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052488"}


id: GO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with and increases L-dopa decarboxylase activity.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"L-dopa decarboxylase activator activity","synonyms":[{"name":"DDC activator activity","type":"exact"}],"termid":"GO:0036478"}


id: GO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminoimidazole ribonucleotide + S-adenosylmethionine = 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate + 5'deoxyadenosine.","definition_xrefs":["PMID:18953358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity","synonyms":[{"name":"HMP-P synthase activity","type":"exact"},{"name":"ThiC","type":"related"}],"termid":"GO:0070284"}


id: PBO:0085338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase, minor isoform; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; PGM1 has a paralog, PGM2, that arose from the whole genome duplication","termid":"PBO:0085338"}


id: PBO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor 1","termid":"PBO:0046857"}


id: PBO:0059652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 18","termid":"PBO:0059652"}


id: PBO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XII","termid":"PBO:0046812"}


id: PBO:0051175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64","termid":"PBO:0051175"}


id: GO:0019101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in a female organism's soma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic sex determination","termid":"GO:0018993"},{"relation_name":"is_a","term_name":"female sex determination","termid":"GO:0030237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female somatic sex determination","termid":"GO:0019101"}


id: PBO:0040352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 1","termid":"PBO:0040352"}


id: GO:0099609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the side of a microtubule.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008017"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0005515","GO:0008017","GO:0003674"],"is_obsolete":false,"name":"microtubule lateral binding","termid":"GO:0099609"}


id: GO:0005969
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate.","definition_xrefs":["EC:2.6.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine-pyruvate aminotransferase complex","secondary_identifiers":["GO:0005970"],"synonyms":[{"name":"serine-pyruvate aminotransferase, type 1 complex","type":"narrow"},{"name":"serine-pyruvate aminotransferase, type 2B complex","type":"narrow"}],"termid":"GO:0005969"}


id: PBO:0062659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 9","termid":"PBO:0062659"}


id: PBO:0082134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin filament binding protein that enhances actin ring formation; IQGAP family member required for assembly and contraction of the AMR, prior to cytokinesis; localizes to the contractile ring during anaphase in an Mlc1p-dependent manner, recruiting Myo1p and Hof1p to the site, and promoting cytokinetic core complex assembly; specifies bud-site selection, localizing axial markers Bud4p and Cdc12p; regulated by Cdc28p; relocalizes from the bud neck to the cytoplasm upon replication stress","termid":"PBO:0082134"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:jl","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: PBO:0091087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc3","termid":"PBO:0091087"}


id: PBO:0045405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 7","termid":"PBO:0045405"}


id: PBO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein (predicted)","termid":"PBO:0000884"}


id: GO:0048481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ovule over time, from its formation to the mature structure. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"plant-type ovary development","termid":"GO:0035670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule development","termid":"GO:0048481"}


id: GO:0046106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thymine biosynthetic process","synonyms":[{"name":"thymine anabolism","type":"exact"},{"name":"thymine biosynthesis","type":"exact"},{"name":"thymine formation","type":"exact"},{"name":"thymine synthesis","type":"exact"}],"termid":"GO:0046106"}


id: GO:1990595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with basic secretagogues to initiate pseudo-allergic reactions in mast cells.","definition_xrefs":["PMID:25517090","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mast cell secretagogue receptor activity","termid":"GO:1990595"}


id: PBO:0002798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal transforming acidic coiled-coil (TACC) protein ortholog Alp7","termid":"PBO:0002798"}


id: GO:0021957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a pyramidal cell, that carries efferent (outgoing) action potentials from the cell body in cerebral cortex layer V towards target cells in the gray matter of the spinal cord. This axonal process is a member of those that make up the corticospinal tract.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","PMID:9878731","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal tract morphogenesis","synonyms":[{"name":"CST axonogenesis","type":"exact"},{"name":"corticospinal tract axonogenesis","type":"exact"}],"termid":"GO:0021957"}


id: PBO:0073951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 2","termid":"PBO:0073951"}


id: PBO:0086873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; localizes to membrane contact sites throughout the cell, including nucleus-vacuole junctions and ER-mitochondrial contact sites","termid":"PBO:0086873"}


id: PBO:0078839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-3","termid":"PBO:0078839"}


id: CHEBI:600520
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micafungin","termid":"CHEBI:600520"}


id: PBO:0110165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferase Trm44","termid":"PBO:0110165"}


id: PBO:0085598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcium homeostasis and exit from quiescence; required for proper trehalose levels during quiescence; may play a role in cell wall biosynthesis, mutants are hypersensitive to antifungal, Papulacandin B; null mutants have increased plasmid loss; interacts with Pdr5p","termid":"PBO:0085598"}


id: GO:0009966
data:
  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summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any 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of signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035466"],"synonyms":[{"name":"regulation of signaling pathway","type":"related"},{"name":"regulation of signalling pathway","type":"related"}],"termid":"GO:0009966","terms_by_termid":{"GO:0031030":null,"GO:0031031":null,"GO:0032007":null,"GO:0032008":null,"GO:0043408":null,"GO:0043409":null,"GO:0046578":null,"GO:0046580":null,"GO:0050850":null,"GO:0062038":null,"GO:0090029":null,"GO:0090267":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:1900745":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903432":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null,"GO:1905325":null,"GO:1905326":null,"GO:2000639":null,"GO:2000640":null}}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: PBO:0084681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial branched-chain amino acid (BCAA) aminotransferase; preferentially involved in BCAA biosynthesis; homolog of murine ECA39; highly expressed during logarithmic phase and repressed during stationary phase; BAT1 has a paralog, BAT2, that arose from the whole genome duplication","termid":"PBO:0084681"}


id: GO:0042447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormone catabolic process","synonyms":[{"name":"hormone breakdown","type":"exact"},{"name":"hormone catabolism","type":"exact"},{"name":"hormone degradation","type":"exact"}],"termid":"GO:0042447"}


id: GO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Primary lysosomal granule found in neutrophil granulocytes. Contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.","definition_xrefs":["PMID:17152095","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary lysosome","termid":"GO:0005766"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"azurophil granule","synonyms":[{"name":"primary granule","type":"exact"}],"termid":"GO:0042582"}


id: PBO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035752"}


id: PBO:0087297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad1p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein","termid":"PBO:0087297"}


id: FYPO:0003725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003725"}


id: PBO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1","termid":"PBO:0047316"}


id: PR:P0CT79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.06","synonyms":[{"name":"S33 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2801","type":"exact"}],"termid":"PR:P0CT79"}


id: PBO:0068454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 30, pseudogene","termid":"PBO:0068454"}


id: PBO:0063717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5P4 antisense RNA 1","termid":"PBO:0063717"}


id: GO:0009269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to desiccation","synonyms":[{"name":"desiccation tolerance","type":"related"}],"termid":"GO:0009269"}


id: GO:1900804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of brevianamide F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete brevianamide F catabolic process (obsolete GO:1900804)","synonyms":[{"name":"L-prolyl-L-tryptophan anhydride breakdown","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride catabolic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride catabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride degradation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride breakdown","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride catabolic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride catabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride degradation","type":"related"},{"name":"brevianamide F breakdown","type":"exact"},{"name":"brevianamide F catabolism","type":"exact"},{"name":"brevianamide F degradation","type":"exact"},{"name":"cyclo-(Trp-Pro) breakdown","type":"related"},{"name":"cyclo-(Trp-Pro) catabolic process","type":"related"},{"name":"cyclo-(Trp-Pro) catabolism","type":"related"},{"name":"cyclo-(Trp-Pro) degradation","type":"related"},{"name":"cyclo-L-Trp-L-Pro breakdown","type":"related"},{"name":"cyclo-L-Trp-L-Pro catabolic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro catabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro degradation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline breakdown","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline catabolic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline catabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline degradation","type":"related"},{"name":"tryptophan-proline diketopiperazine breakdown","type":"related"},{"name":"tryptophan-proline diketopiperazine catabolic process","type":"related"},{"name":"tryptophan-proline diketopiperazine catabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine degradation","type":"related"}],"termid":"GO:1900804"}


id: SO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The C-terminal residues of a polypeptide which are exchanged for a GPI-anchor.","definition_xrefs":["EBI:rh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_for_gpi_anchor_region","synonyms":[{"name":"cleaved for gpi anchor region","type":"exact"}],"termid":"SO:0001408"}


id: GO:0006294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins on DNA to form the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage. This assembly occurs before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex assembly","synonyms":[{"name":"nucleotide-excision repair, preincision complex formation","type":"exact"}],"termid":"GO:0006294"}


id: PBO:0088850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi protein, associated with COP vesicles (predicted), DUF5427","termid":"PBO:0088850"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: PBO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPBL cohesin loading factor","termid":"PBO:0061051"}


id: PR:Q9UT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-mannosidase 2C1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01225","PRO:DNx","PANTHER:PTHR11607:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.05","secondary_identifiers":["UniProtKB:Q9UT61"],"synonyms":[{"name":"Spom972h-MAN2C1","type":"exact"},{"name":"alpha-D-mannoside mannohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT61"}


id: GO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of crystal cell differentiation","termid":"GO:0042689"}


id: PBO:0057532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 648","termid":"PBO:0057532"}


id: GO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymonodemethylisoproturon + H2O = formaldehyde + 4'-(2-hydroxyisopropyl)phenylurea + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxymonomethylisoproturon dimethylaminedehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"termid":"GO:0034570"}


id: PBO:0068131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 438","termid":"PBO:0068131"}


id: PBO:0077357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 97 pseudogene 1","termid":"PBO:0077357"}


id: PBO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 12, pseudogene","termid":"PBO:0070055"}


id: GO:1990299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a Bub1-Bub3 complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Bub1-Bub3 complex localization to kinetochore","termid":"GO:1990299"}


id: GO:0102279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-cis retinol-[cellular-retinol-binding-protein] + a phosphatidylcholine = a cellular-retinol-binding protein + an 11-cis-retinyl ester + a 1-lysophosphatidylcholine.","definition_xrefs":["EC:2.3.1.135","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"lecithin:11-cis retinol acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12563"],"termid":"GO:0102279"}


id: FYPO:0005282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to inositol starvation.","definition_xrefs":["PomBase:mah","PMID:19606215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to inositol starvation","synonyms":[{"name":"decreased growth during cellular response to inositol starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to inositol starvation","type":"exact"},{"name":"hypersensitive to inositol starvation","type":"exact"},{"name":"reduced growth in low inositol","type":"related"},{"name":"sensitive to inositol depletion","type":"exact"},{"name":"sensitive to inositol deprivation","type":"exact"},{"name":"sensitive to inositol starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to inositol starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0005282"}


id: PBO:0050381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 5","termid":"PBO:0050381"}


id: PBO:0002927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein sorting protein (predicted)","termid":"PBO:0002927"}


id: FYPO:0004532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur, and the position or morphology of the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000631","FYPO:0000120","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic M phase with abnormal spindle","synonyms":[{"name":"abnormal cell cycle arrest in mitotic M phase with abnormal mitotic spindle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase with abnormal spindle during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase with condensed chromosomes and abnormal spindle","type":"related"},{"name":"abnormal mitotic cell cycle arrest in M phase with abnormal spindle","type":"exact"}],"termid":"FYPO:0004532"}


id: GO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: GO:1900522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to amylopectin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to amylopectin","termid":"GO:1900521"},{"relation_name":"negatively_regulates","term_name":"response to amylopectin","termid":"GO:0044591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to amylopectin","synonyms":[{"name":"down regulation of response to amylopectin","type":"exact"},{"name":"down-regulation of response to amylopectin","type":"exact"},{"name":"downregulation of response to amylopectin","type":"exact"},{"name":"inhibition of response to amylopectin","type":"narrow"}],"termid":"GO:1900522"}


id: GO:1990002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxyacetone + NADP+ = H+ + methylglyoxal + NADPH.","definition_xrefs":["PMID:16077126","RHEA:27986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH-dependent, acetol producing)","secondary_identifiers":["MetaCyc:RXN0-4281"],"termid":"GO:1990002"}


id: GO:0003899
data:
  {"annotated_genes":["SJAG_00637","SJAG_00399","SJAG_01713","SJAG_04161","SJAG_02101","SJAG_03468","SJAG_02600","SJAG_04934","SJAG_03578","SJAG_03761","SJAG_04106","SJAG_00119","SJAG_02506","SJAG_00731","SJAG_04030","SJAG_02070","SJAG_04994","SJAG_16460","SJAG_04894","SJAG_03921","SJAG_03144","SJAG_02653","SJAG_01765","SJAG_01444","SJAG_03035","SJAG_00619","SJAG_03014","SJAG_02627","SJAG_01313","SJAG_04408","SJAG_03181","SJAG_04261","SJAG_00458","SJAG_01562"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76276,77707,91479,97024,97063,98027,100335,104665,105163,107712,110930,111716,112016],"is_not":false,"summary":null,"term":"GO:0003899"},{"annotations":[94961,98448,100773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003896"},{"annotations":[74934,109522,76082,74975,71005,70294,75002,75573,74498,73814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001054"},{"annotations":[76921,73885,74499,73104,74932,75003,71006,75574,76083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001055"},{"annotations":[103852,74500,72928,73815,71294,76084,75004,70295,75575,71007,88657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001056"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["EC:2.7.7.6","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' RNA polymerase activity","termid":"GO:0034062"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00399":null,"SJAG_00458":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04894":null,"SJAG_04934":null,"SJAG_04994":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0140098","GO:0016779"],"is_obsolete":false,"name":"DNA-directed 5'-3' RNA polymerase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9670149","Reactome:R-HSA-74986","Reactome:R-HSA-167136","Reactome:R-HSA-167115","Reactome:R-HSA-174425","Reactome:R-HSA-9697085","Reactome:R-HSA-203901","Reactome:R-HSA-6781824","MetaCyc:DNA-DIRECTED-RNA-POLYMERASE-RXN","Reactome:R-HSA-75850","Reactome:R-HSA-75869","Reactome:R-HSA-167117","Reactome:R-HSA-68913","Reactome:R-HSA-111264","Reactome:R-HSA-75873","GO:0000129","Reactome:R-HSA-9697084","Reactome:R-HSA-167121","Reactome:R-HSA-167113","Reactome:R-HSA-427366","Reactome:R-HSA-5601926","Reactome:R-HSA-76576"],"synonyms":[{"name":"C RNA formation factors","type":"related"},{"name":"C ribonucleic acid formation factors","type":"related"},{"name":"DNA-dependent RNA nucleotidyltransferase activity","type":"related"},{"name":"DNA-dependent RNA polymerase activity","type":"related"},{"name":"DNA-dependent ribonucleate nucleotidyltransferase activity","type":"related"},{"name":"DNA-directed RNA polymerase I activity","type":"narrow"},{"name":"DNA-directed RNA polymerase II activity","type":"narrow"},{"name":"DNA-directed RNA polymerase III activity","type":"narrow"},{"name":"DNA-directed RNA polymerase activity","type":"broad"},{"name":"RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"RNA polymerase I activity","type":"narrow"},{"name":"RNA polymerase II activity","type":"narrow"},{"name":"RNA polymerase III activity","type":"narrow"},{"name":"deoxyribonucleic acid-dependent ribonucleic acid polymerase activity","type":"related"},{"name":"nucleoside-triphosphate:RNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"transcriptase","type":"broad"}],"termid":"GO:0003899","terms_by_termid":{"GO:0001054":null,"GO:0001055":null,"GO:0001056":null,"GO:0003896":null,"GO:0003899":null}}


id: GO:2000200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of ribosomal subunit export from nucleus","synonyms":[{"name":"regulation of ribosomal subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal subunit-nucleus export","type":"exact"},{"name":"regulation of ribosome export from nucleus","type":"related"}],"termid":"GO:2000200"}


id: GO:0090610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a bundle sheath cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:tb","PMID:24517883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle sheath cell fate specification","termid":"GO:0090610"}


id: RO:HOM0000049
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from the same species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_within-species_paralogy_relationship_with","synonyms":[{"name":"within-species paralogous to","type":"exact"}],"termid":"RO:HOM0000049"}


id: FYPO:0004375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Ku-0063794. Cells stop growing (and may die) at a concentration of Ku-0063794 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to Ku-0063794","synonyms":[{"name":"hypersensitive to Ku-0063794","type":"exact"},{"name":"sensitive to KU 0063794","type":"exact"},{"name":"sensitive to Ku-0063794 during mitotic cell cycle","type":"related"},{"name":"sensitive to Ku-0063794 during vegetative growth","type":"exact"}],"termid":"FYPO:0004375"}


id: GO:0052230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of intracellular transport in other organism involved in symbiotic interaction (obsolete GO:0052230)","synonyms":[{"name":"modulation of intracellular trafficking in other organism","type":"exact"},{"name":"modulation of intracellular transport in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052230"}


id: GO:1905277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:25745997","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial tube formation","synonyms":[{"name":"down regulation of epithelial tube formation","type":"exact"},{"name":"down-regulation of epithelial tube formation","type":"exact"},{"name":"downregulation of epithelial tube formation","type":"exact"},{"name":"inhibition of epithelial tube formation","type":"narrow"}],"termid":"GO:1905277"}


id: GO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"negatively_regulates","term_name":"dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of dopamine receptor signaling pathway","synonyms":[{"name":"negative regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060160"}


id: GO:0043023
data:
  {"annotated_genes":["SJAG_04874","SJAG_03232","SJAG_01074","SJAG_03012","SJAG_01176","SJAG_03882","SJAG_00188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71285,72945,75703,75718,78118,84158,90832],"is_not":false,"summary":null,"term":"GO:0043023"}]},"cv_name":"molecular_function","definition":"Binding to a large ribosomal subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_01074":null,"SJAG_01176":null,"SJAG_03012":null,"SJAG_03232":null,"SJAG_03882":null,"SJAG_04874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribosomal large subunit binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043023","terms_by_termid":{"GO:0043023":null}}


id: MOD:00193
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-oxoalanine.","definition_xrefs":["PubMed:9478923","RESID:AA0185#CYS","Unimod:402#C","DeltaMass:350","PubMed:14563551","PubMed:7628016","PubMed:8681943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-3-oxoalanine","termid":"MOD:01169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"Oxala(Cys)","type":"exact"}],"termid":"MOD:00193"}


id: PBO:0084215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric Zn2Cys6 zinc finger transcription factor; binds to a weak acid response element to induce transcription of PDR12 and FUN34, encoding an acid transporter and a putative ammonia transporter, respectively","termid":"PBO:0084215"}


id: PBO:0088295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyrimidine nucleotide Rim2","termid":"PBO:0088295"}


id: SO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the three_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_coding_region","synonyms":[{"name":"three prime exon coding region","type":"exact"}],"termid":"SO:0000197"}


id: PBO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 6","termid":"PBO:0051096"}


id: GO:0061089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sequestering of zinc ion (obsolete GO:0061089)","termid":"GO:0061089"}


id: GO:0051919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of fibrinolysis","termid":"GO:0051917"},{"relation_name":"positively_regulates","term_name":"fibrinolysis","termid":"GO:0042730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibrinolysis","synonyms":[{"name":"activation of fibrinolysis","type":"narrow"},{"name":"stimulation of fibrinolysis","type":"narrow"},{"name":"up regulation of fibrinolysis","type":"exact"},{"name":"up-regulation of fibrinolysis","type":"exact"},{"name":"upregulation of fibrinolysis","type":"exact"}],"termid":"GO:0051919"}


