# terms

id: PBO:0074831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 27","termid":"PBO:0074831"}


id: GO:0016279
data:
  {"annotated_genes":["SJAG_04574","SJAG_01193","SJAG_02868","SJAG_01054","SJAG_01536","SJAG_01079","SJAG_01482","SJAG_03869","SJAG_03487","SJAG_03228","SJAG_03630","SJAG_02873","SJAG_01146","SJAG_00769","SJAG_02692","SJAG_04159","SJAG_01425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70231,71933,73226,74360,75046,76603,77288,77398,83446,110695,112071,112401],"is_not":false,"summary":null,"term":"GO:0016279"},{"annotations":[91087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[91088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[111756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[111798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[105855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[105856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[105857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[112260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the epsilon-amino group of a lysine residue in a protein substrate.","definition_xrefs":["PMID:12054878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"lysine N-methyltransferase activity","termid":"GO:0016278"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01054":null,"SJAG_01079":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_01425":null,"SJAG_01482":null,"SJAG_01536":null,"SJAG_02692":null,"SJAG_02868":null,"SJAG_02873":null,"SJAG_03228":null,"SJAG_03487":null,"SJAG_03630":null,"SJAG_03869":null,"SJAG_04159":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0008276","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"protein-lysine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:51736","Reactome:R-HSA-8932276","Reactome:R-HSA-8932221","Reactome:R-HSA-212263","Reactome:R-HSA-8931858","Reactome:R-HSA-8865237","Reactome:R-HSA-8931974","Reactome:R-HSA-8932413","Reactome:R-HSA-8932275","Reactome:R-HSA-8932243"],"synonyms":[{"name":"protein (lysine) methyltransferase activity","type":"exact"},{"name":"protein lysine methylase activity","type":"exact"}],"termid":"GO:0016279","terms_by_termid":{"GO:0016279":null,"GO:0062122":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: PBO:0065272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 long non-coding RNA","termid":"PBO:0065272"}


id: SO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for pseudouridylation_guide_snoRNA. A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA_gene","termid":"SO:0002376"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA_gene","synonyms":[{"name":"pseudouridylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002380"}


id: GO:2000103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"},{"relation_name":"positively_regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mammary stem cell proliferation","termid":"GO:2000103"}


id: PBO:0002749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein Mae1","termid":"PBO:0002749"}


id: PBO:0068680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 61, pseudogene","termid":"PBO:0068680"}


id: GO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + penicillin N = CO2 + deacetoxycephalosporin C + H2O + succinate.","definition_xrefs":["EC:1.14.20.1","RHEA:20748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deacetoxycephalosporin-C synthase activity","secondary_identifiers":["MetaCyc:1.14.20.1-RXN","KEGG_REACTION:R05301","GO:0045441"],"synonyms":[{"name":"DAOC synthase activity","type":"related"},{"name":"DAOCS activity","type":"related"},{"name":"deacetoxycephalosporin C synthetase activity","type":"exact"},{"name":"expandase activity","type":"exact"},{"name":"penicillin N expandase activity","type":"related"},{"name":"penicillin-N,2-oxoglutarate:oxygen oxidoreductase (ring-expanding)","type":"related"}],"termid":"GO:0050599"}


id: PBO:0013843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein Opt3","termid":"PBO:0013843"}


id: GO:0033885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9S,10S)-10-hydroxy-9-(phosphonooxy)octadecanoate + H2O = (9S,10S)-9,10-dihydroxyoctadecanoate + phosphate.","definition_xrefs":["RHEA:16537","EC:3.1.3.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.76-RXN","KEGG_REACTION:R07582"],"synonyms":[{"name":"(9S,10S)-10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity","type":"related"},{"name":"(9S,10S)-10-hydroxy-9-(phosphonooxy)octadecanoate phosphohydrolase activity","type":"exact"},{"name":"dihydroxy fatty acid phosphatase activity","type":"broad"},{"name":"hydroxy fatty acid phosphatase activity","type":"broad"},{"name":"hydroxy lipid phosphatase activity","type":"broad"},{"name":"lipid-phosphate phosphatase activity","type":"broad"},{"name":"sEH","type":"related"},{"name":"soluble epoxide hydrolase activity","type":"related"}],"termid":"GO:0033885"}


id: PBO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 30","termid":"PBO:0070659"}


id: PBO:0091126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein family with conserved tryptophans cysteines and tyrosines","termid":"PBO:0091126"}


id: PBO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 2","termid":"PBO:0005865"}


id: PBO:0067714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 12","termid":"PBO:0067714"}


id: PBO:0058344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4717","termid":"PBO:0058344"}


id: PBO:0064768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase H pseudogene 2","termid":"PBO:0064768"}


id: GO:0019592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannitol, the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol catabolic process","termid":"GO:0019407"},{"relation_name":"is_a","term_name":"mannitol metabolic process","termid":"GO:0019594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"mannitol catabolic process","secondary_identifiers":["MetaCyc:MANNIDEG-PWY","MetaCyc:PWY-3861"],"synonyms":[{"name":"mannitol breakdown","type":"exact"},{"name":"mannitol catabolism","type":"exact"},{"name":"mannitol degradation","type":"exact"}],"termid":"GO:0019592"}


id: PBO:0071409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 15","termid":"PBO:0071409"}


id: PBO:0088175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylulokinase; converts D-xylulose and ATP to xylulose 5-phosphate and ADP; rate limiting step in fermentation of xylulose; required for xylose fermentation by recombinant S. cerevisiae strains","termid":"PBO:0088175"}


id: GO:0102117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A9 + S-adenosyl-L-methionine = gibberellin A9 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.275","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin A9 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11358","RHEA:36119"],"termid":"GO:0102117"}


id: PBO:0068515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 107, pseudogene","termid":"PBO:0068515"}


id: FYPO:0006937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which lipid binding by a gene product does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished lipid binding","synonyms":[{"name":"lipid binding abolished","type":"exact"}],"termid":"FYPO:0006937"}


id: FYPO:0002202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable stubby vegetative cell population (obsolete FYPO:0002202)","synonyms":[{"name":"stubby inviable vegetative cell population","type":"exact"}],"termid":"FYPO:0002202"}


id: GO:0036400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a short neuropeptide F and transmitting the signal within the cell to initiate a change in cell activity. Short neuropeptide F is an arthropod peptide of less than 28 residues (as small as 8-10 residues in some species) with a C-terminal RFamide or LRFamide.","definition_xrefs":["PMID:21440021","GOC:ha","PMID:16330127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"short neuropeptide F receptor activity","synonyms":[{"name":"sNPF receptor activity","type":"exact"}],"termid":"GO:0036400"}


id: GO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trichoblast cell to attain its fully functional state.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast maturation","termid":"GO:0048764"}


id: PBO:0081569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 496","termid":"PBO:0081569"}


id: FYPO:0004769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular asparagine level","termid":"FYPO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar asparagine level","synonyms":[{"name":"increased level of asparagine in vacuole","type":"exact"},{"name":"increased vacuolar L-asparagine level","type":"exact"},{"name":"increased vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004769"}


id: GO:0090521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell.","definition_xrefs":["PMID:21402783","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte cell migration","synonyms":[{"name":"glomerular visceral epithelial cell migration","type":"exact"}],"termid":"GO:0090521"}


id: PBO:0081299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 80","termid":"PBO:0081299"}


id: PBO:0056051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like","termid":"PBO:0056051"}


id: PBO:0016050
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Tsm One","termid":"PBO:0016050"}


id: FYPO:0001021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth during cellular response to osmotic stress","synonyms":[{"name":"normal cell population growth during cellular response to osmotic stress","type":"exact"},{"name":"normal cellular response to osmotic stress","type":"related"},{"name":"normal vegetative cell population growth during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0001021"}


id: PBO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109F (pseudogene)","termid":"PBO:0044823"}


id: FYPO:0007350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PMID:31811152","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"decreased homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007350"}


id: PBO:0087929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase); P4-type ATPase; maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation, endocytosis, protein trafficking between the Golgi and endosomal system and the cellular response to mating pheromone; autoinhibited by its C-terminal tail; localizes to the trans-Golgi network","termid":"PBO:0087929"}


id: PBO:0082836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm","termid":"PBO:0082836"}


id: PR:Q09777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgs1 gene.","definition_xrefs":["UniProtKB:Q09777","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.12c","synonyms":[{"name":"Spom972h-rgs1","type":"exact"}],"termid":"PR:Q09777"}


id: PBO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A3","termid":"PBO:0044084"}


id: PBO:0087314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the clathrin-associated adaptor complex AP-2; AP-2 is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex","termid":"PBO:0087314"}


id: GO:1903093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K48-linked deubiquitination.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K48-linked deubiquitination","termid":"GO:0071108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K48-linked deubiquitination","termid":"GO:1903093"}


id: PBO:0004696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase (predicted)","termid":"PBO:0004696"}


id: GO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin","synonyms":[{"name":"response to prostaglandin stimulus","type":"exact"}],"termid":"GO:0034694"}


id: PBO:0068308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11 pseudogene 1","termid":"PBO:0068308"}


id: SO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000764 BAC_clone (obsolete SO:0000764)","termid":"SO:0000764"}


id: SO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic positions associated with cis-splicing. Contains the first and second positions immediately before the exon and the first, second and fifth positions immediately after.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_cis_splice_site","synonyms":[{"name":"extended cis splice site","type":"exact"}],"termid":"SO:0001993"}


id: PBO:0055812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1 pseudogene 1","termid":"PBO:0055812"}


id: PBO:0011148
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Chinese Hamster Ovary (CHO) L-G1PT","termid":"PBO:0011148"}


id: GO:0106187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to an oxidoreduction reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to oxidoreductase reactions (obsolete GO:0106187)","secondary_identifiers":["EC:7.1.1.-"],"termid":"GO:0106187"}


id: GO:0005788
data:
  {"annotated_genes":["SJAG_01180","SJAG_03535","SJAG_00288","SJAG_00530","SJAG_02413","SJAG_04571","SJAG_00790","SJAG_04904","SJAG_02875","SJAG_00403","SJAG_04046"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77819,78652,87962,87987,96285,98417,106337,108971,109078,113701],"is_not":false,"summary":null,"term":"GO:0005788"},{"annotations":[88720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099021"},{"annotations":[88724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099020"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the endoplasmic reticulum.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00288":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00790":null,"SJAG_01180":null,"SJAG_02413":null,"SJAG_02875":null,"SJAG_03535":null,"SJAG_04046":null,"SJAG_04571":null,"SJAG_04904":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016022"],"synonyms":[{"name":"ER cisterna","type":"exact"},{"name":"ER lumen","type":"exact"},{"name":"cisternal lumen","type":"exact"},{"name":"endoplasmic reticulum cisterna","type":"exact"}],"termid":"GO:0005788","terms_by_termid":{"GO:0005788":null,"GO:0099020":null,"GO:0099021":null}}


id: PBO:0056990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 32","termid":"PBO:0056990"}


id: GO:0060280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ovulation","termid":"GO:0060278"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ovulation","termid":"GO:0060280"}


id: GO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion","synonyms":[{"name":"response to iron","type":"exact"}],"termid":"GO:0010039"}


id: PBO:0002851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-3 peroxisome import protein (predicted)","termid":"PBO:0002851"}


id: PBO:0048464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase regulator","termid":"PBO:0048464"}


id: PBO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR antisense RNA 1","termid":"PBO:0045959"}


id: PBO:0063960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 1","termid":"PBO:0063960"}


id: SO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A physical quality which inheres to the variant by virtue of the number instances of the variant within a population.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unique_variant","synonyms":[{"name":"unique variant","type":"exact"}],"termid":"SO:0001764"}


id: PBO:0078961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-4","termid":"PBO:0078961"}


id: PBO:0084415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major ADP/ATP carrier of the mitochondrial inner membrane; exchanges cytosolic ADP for mitochondrially synthesized ATP; also imports heme and ATP; required for viability in many lab strains that carry a sal1 mutation; PET9 has a paralog, AAC3, that arose from the whole genome duplication; human homolog SLC25A4 implicated in progressive external ophthalmoplegia can complement yeast null mutant","termid":"PBO:0084415"}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: PBO:0044403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 115, pseudogene","termid":"PBO:0044403"}


id: PBO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6 pseudogene 3","termid":"PBO:0045726"}


id: GO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromeric complex consisting of Cbf1 and basic leucine zipper (bZIP) containing transcriptional activators, Met4 and Met28, that forms over the sequence TCACGTG in the upstream activating sequence (UAS) of genes involved in sulfur amino acid metabolism, resulting in their transcriptional activation.","definition_xrefs":["PMID:9171357","PMID:8665859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cbf1-Met4-Met28 complex","termid":"GO:0089713"}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["GOC:ai","PMID:15034926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: FYPO:0004398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylarsine oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to phenylarsine oxide","synonyms":[{"name":"resistance to phenylarsine oxide during mitotic cell cycle","type":"related"},{"name":"resistance to phenylarsine oxide during vegetative growth","type":"exact"},{"name":"resistant to phenylarsine oxide","type":"exact"}],"termid":"FYPO:0004398"}


id: GO:0052502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway (obsolete GO:0052502)","synonyms":[{"name":"activation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont MAPK-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"up regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"up-regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052502"}


id: PBO:0005033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin synthase","termid":"PBO:0005033"}


id: GO:0046376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-alpha-D-mannosylchitobiosyldiphosphodolichol, a substance composed of mannosylchitobiosyldiphosphodolichol in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol metabolic process","synonyms":[{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol metabolism","type":"exact"}],"termid":"GO:0046376"}


id: GO:0032796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:12714569","PMID:12787750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uropod organization","synonyms":[{"name":"uropod organisation","type":"exact"},{"name":"uropod organization and biogenesis","type":"related"}],"termid":"GO:0032796"}


id: PBO:0078841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-5","termid":"PBO:0078841"}


id: GO:0015914
data:
  {"annotated_genes":["SJAG_03851","SJAG_05209","SJAG_02516","SJAG_03338","SJAG_00589","SJAG_00576","SJAG_03710","SJAG_01305","SJAG_01229","SJAG_16459","SJAG_02581","SJAG_05268","SJAG_00669","SJAG_03172","SJAG_06440","SJAG_03050","SJAG_01731","SJAG_01225","SJAG_00018","SJAG_01095","SJAG_02957","SJAG_03746","SJAG_00230","SJAG_02132","SJAG_02897","SJAG_01945","SJAG_03416","SJAG_00587","SJAG_03741","SJAG_01470","SJAG_02114","SJAG_03721","SJAG_02943","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[96042,93064,99532,94190,103075,102173,102944,104056,86599,104914,111511,101282,93125,84972,96801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[74234,97715,95007,86234,86233,97834,86232,104900,86230,100526,86231,73982,86229,86228,86227,72552,96803,86226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[72819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phospholipid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015914","terms_by_termid":{"GO:0017121":null,"GO:0045332":null,"GO:0120010":null,"GO:0140331":null}}


id: PBO:0080013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 15","termid":"PBO:0080013"}


id: GO:0006918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis by p53 (obsolete GO:0006918)","synonyms":[{"name":"induction of apoptosis by p53","type":"exact"}],"termid":"GO:0006918"}


id: GO:0003983
data:
  {"annotated_genes":["SJAG_02178","SJAG_01089"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60139,109743],"is_not":false,"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + UTP = diphosphate + UDP-D-glucose.","definition_xrefs":["RHEA:19889","EC:2.7.7.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70286","KEGG_REACTION:R00289","MetaCyc:GLUC1PURIDYLTRANS-RXN"],"synonyms":[{"name":"UDP glucose pyrophosphorylase activity","type":"related"},{"name":"UDP-glucose diphosphorylase activity","type":"related"},{"name":"UDP-glucose pyrophosphorylase activity","type":"related"},{"name":"UDPG phosphorylase activity","type":"related"},{"name":"UDPG pyrophosphorylase activity","type":"related"},{"name":"UTP-glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"glucose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"uridine 5'-diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphate-D-glucose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"uridine-diphosphate glucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0003983","terms_by_termid":{"GO:0003983":null}}


id: PBO:0055148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2567","termid":"PBO:0055148"}


id: FYPO:0004170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"abolished centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0004170"}


id: PBO:0054687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2096","termid":"PBO:0054687"}


id: GO:2000707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of dense core granule biogenesis","termid":"GO:2000705"},{"relation_name":"positively_regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dense core granule biogenesis","termid":"GO:2000707"}


id: GO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-based cuticle development (obsolete GO:0007592)","synonyms":[{"name":"protein-based cuticle anabolism","type":"exact"},{"name":"protein-based cuticle biosynthetic process","type":"exact"},{"name":"protein-based cuticle development","type":"exact"},{"name":"protein-based cuticle formation","type":"exact"},{"name":"protein-based cuticle synthesis","type":"exact"}],"termid":"GO:0007592"}


id: PBO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAU pseudogene 2","termid":"PBO:0047324"}


id: GO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a follicular dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["PMID:15606789","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular dendritic cell activation","termid":"GO:0002266"}


id: PBO:0030227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus_during_salt_stress","termid":"PBO:0030227"}


id: GO:1900350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"activation of methane biosynthetic process from methylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from methylamine","type":"exact"}],"termid":"GO:1900350"}


id: PBO:0088977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19","termid":"PBO:0088977"}


id: PBO:0072707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 2A","termid":"PBO:0072707"}


id: PBO:0082316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF/CREB family basic leucine zipper (bZIP) transcription factor; binds as a homodimer to the ATF/CREB consensus sequence TGACGTCA; important for carbon source utilization; target genes include GRE2 and COS8; ACA1 has a paralog, CST6, that arose from the whole genome duplication","termid":"PBO:0082316"}


id: PATO:0000614
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern where all the repeated elements are oriented in the same direction.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriented","termid":"PATO:0000614"}


id: GO:0030520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by estrogen binding to an intracellular receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular steroid hormone receptor signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intracellular estrogen receptor signaling pathway","synonyms":[{"name":"estrogen receptor signaling pathway","type":"broad"},{"name":"estrogen receptor signalling pathway","type":"broad"}],"termid":"GO:0030520"}


id: PBO:0063279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 5","termid":"PBO:0063279"}


id: PBO:0068623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 3, pseudogene","termid":"PBO:0068623"}


id: PBO:0055826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 1","termid":"PBO:0055826"}


id: PBO:0059041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 28","termid":"PBO:0059041"}


id: PBO:0074635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 29","termid":"PBO:0074635"}


id: PBO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0000376"}


id: SO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of sequence that has been inserted and is being propagated by the clone.","direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"},{"relation_name":"part_of","term_name":"clone_insert","termid":"SO:0000753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cloned_region","synonyms":[{"name":"cloned region","type":"exact"},{"name":"cloned segment","type":"exact"}],"termid":"SO:0000785"}


id: PR:Q10434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-actin-capping protein subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin-capping protein subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.07","secondary_identifiers":["UniProtKB:Q10434"],"synonyms":[{"name":"SPAC12B10.07","type":"related"},{"name":"Spom972h-CAPZA2","type":"exact"}],"termid":"PR:Q10434"}


id: PR:Q9HDU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylgalactosamine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10457:SF7","OMA:SCHPO04144","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.13","secondary_identifiers":["UniProtKB:Q9HDU2"],"synonyms":[{"name":"Spom972h-GALK2","type":"exact"},{"name":"galactose kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU2"}


id: GO:0032006
data:
  {"annotated_genes":["SJAG_03928","SJAG_03907","SJAG_03089","SJAG_03371","SJAG_00561","SJAG_04496","SJAG_00289","SJAG_01032","SJAG_00824","SJAG_04910","SJAG_02231","SJAG_02765","SJAG_01184","SJAG_00169","SJAG_00457","SJAG_03355","SJAG_05030","SJAG_03720","SJAG_00143","SJAG_03678","SJAG_01187","SJAG_00209","SJAG_03799","SJAG_05346","SJAG_03405","SJAG_04249","SJAG_00688","SJAG_00875","SJAG_00991","SJAG_03072","SJAG_02605","SJAG_04235","SJAG_01142","SJAG_03501","SJAG_06588","SJAG_01983","SJAG_04206","SJAG_05184","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[83805,105060,106309,111399,104655,73240,94432,98501,113420,91697,96969,109295,100575,88957,102818,111744,95099,102572,108480,109874,71594,112283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[111540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"},{"annotations":[100576,72760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[75083,89942,75843,104656,108185,113554,91698,84091,105904,74743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[86874,93321,102425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"},{"annotations":[103270,110742,89693,88533,113013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03907":null,"SJAG_03928":null,"SJAG_04206":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_05346":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TOR signaling cascade","type":"related"},{"name":"regulation of TOR signaling pathway","type":"exact"},{"name":"regulation of TOR signalling pathway","type":"exact"},{"name":"regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032006","terms_by_termid":{"GO:0032007":null,"GO:0032008":null,"GO:1903432":null,"GO:1903940":null,"GO:1904262":null,"GO:1904263":null,"GO:1904515":null}}


id: PR:Q9UUE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnt5 gene.","definition_xrefs":["UniProtKB:Q9UUE2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein csx2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.08c","synonyms":[{"name":"Spom972h-cnt5","type":"exact"}],"termid":"PR:Q9UUE2"}


id: GO:0030891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1.","definition_xrefs":["PMID:11865071","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"VCB complex","synonyms":[{"name":"VHL complex","type":"exact"},{"name":"pVHL-elongin C-elongin B complex","type":"exact"},{"name":"von Hippel-Lindau tumor suppressor complex","type":"exact"}],"termid":"GO:0030891"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: PBO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 9","termid":"PBO:0045269"}


id: GO:2000152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulation of ubiquitin-specific protease activity (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-specific protease activity","synonyms":[{"name":"regulation of UBP","type":"related"},{"name":"regulation of UCH2","type":"related"},{"name":"regulation of deubiquitinase activity","type":"exact"}],"termid":"GO:2000152"}


id: GO:0075105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075105)","synonyms":[{"name":"negative regulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075105"}


id: PBO:0017529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3 (prediected)","termid":"PBO:0017529"}


id: PR:O94312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp2 gene.","definition_xrefs":["UniProtKB:O94312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.07c","synonyms":[{"name":"Spom972h-pdp2","type":"exact"}],"termid":"PR:O94312"}


id: PR:O43079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1 complex subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02550","PANTHER:PTHR11134:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.02","secondary_identifiers":["UniProtKB:O43079"],"synonyms":[{"name":"Spom972h-AP1B1","type":"exact"},{"name":"beta(1)-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 1 beta-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43079"}


id: GO:0015974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate catabolic process","termid":"GO:0034037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"guanosine pentaphosphate catabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') catabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') catabolism","type":"exact"},{"name":"guanosine pentaphosphate breakdown","type":"exact"},{"name":"guanosine pentaphosphate catabolism","type":"exact"},{"name":"guanosine pentaphosphate degradation","type":"exact"}],"termid":"GO:0015974"}


id: PBO:0028017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_farnesyltransferase_activity","termid":"PBO:0028017"}


id: PBO:0049763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4B","termid":"PBO:0049763"}


id: GO:0060967
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene silencing by regulatory ncRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of gene silencing by RNA","type":"related"},{"name":"negative regulation of gene silencing by ncRNA","type":"related"}],"termid":"GO:0060967","terms_by_termid":{"GO:0060906":null}}


id: GO:1904424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GTP binding.","definition_xrefs":["PMID:19066305","PMID:21454546","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of GTP binding","termid":"GO:1904424"}


id: GO:0072023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thick ascending limb over time, from its formation to the mature structure. The thick ascending limb is the last part of the loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thick ascending limb development","secondary_identifiers":["GO:0072026"],"synonyms":[{"name":"TAL development","type":"exact"}],"termid":"GO:0072023"}


id: PBO:0084206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication","termid":"PBO:0084206"}


id: PBO:0062383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 1 pseudogene","termid":"PBO:0062383"}


id: PBO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 6","termid":"PBO:0045882"}


id: PBO:0070125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 39 pseudogene","termid":"PBO:0070125"}


id: PBO:0086016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to cytosol; conserved among Saccharomyces sensu stricto species","termid":"PBO:0086016"}


id: GO:0030678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex located in the mitochondrion of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. The subunit composition of mitochondrial ribonuclease P complexes varies between species. The complex contains a single RNA molecule and a single protein molecule in yeast (PMID:12045094), but comprises three proteins and lacks an RNA component in humans.","definition_xrefs":["GOC:mah","PMID:27187488","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial ribonuclease P complex","synonyms":[{"name":"mitochondrial RNase P complex","type":"exact"}],"termid":"GO:0030678"}


id: PBO:0017773
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha Amylase Homolog","termid":"PBO:0017773"}


id: PBO:0077869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 4","termid":"PBO:0077869"}


id: PBO:0029619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029619"}


id: PBO:0046031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha","termid":"PBO:0046031"}


id: GO:0016027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that are involved in phototransduction and attached to the transient receptor potential (TRP) channel. The protein connections are mediated through inaD.","definition_xrefs":["PMID:9010208","PMID:9796815","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"},{"relation_name":"part_of","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"inaD signaling complex","synonyms":[{"name":"inaD signalling complex","type":"exact"}],"termid":"GO:0016027"}


id: PBO:0005069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit (predicted)","termid":"PBO:0005069"}


id: PBO:0086345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs; acts on large and small rRNAs, on snRNA U2, and on some mRNAs; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita; small nucleolar ribonucleoprotein particles are also known as snoRNPs","termid":"PBO:0086345"}


id: PBO:0030461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biotin_import","termid":"PBO:0030461"}


id: PBO:0055123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2542","termid":"PBO:0055123"}


id: GO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated immune response to a tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"natural killer cell mediated immune response to tumor cell","termid":"GO:0002423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"}


id: PBO:0059250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L19","termid":"PBO:0059250"}


id: GO:1904161
data:
  {"annotated_genes":["SJAG_04877","SJAG_05197","SJAG_02818","SJAG_00814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75923,90837,98316,104506],"is_not":false,"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"Any DNA synthesis that is involved in UV-damage excision repair.","definition_xrefs":["PMID:10704216","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"UV-damage excision repair","termid":"GO:0070914"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02818":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in UV-damage excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA synthesis during UV-damage excision repair","type":"related"},{"name":"DNA synthesis during UV-damaged DNA endonuclease-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVDE-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVER","type":"related"},{"name":"DNA synthesis involved in AER","type":"related"},{"name":"DNA synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVER","type":"exact"},{"name":"DNA synthesis involved in alternative excision repair","type":"related"},{"name":"mitotic DNA repair synthesis involved in UV-damage excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVDE-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVER","type":"narrow"}],"termid":"GO:1904161","terms_by_termid":{"GO:1904161":null}}


id: GO:1905024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane repolarization during ventricular cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","PMID:19893015","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ventricular cardiac muscle cell membrane repolarization","termid":"GO:0060307"},{"relation_name":"is_a","term_name":"regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905031"},{"relation_name":"regulates","term_name":"membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:0098915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"regulation of electrocardiogram T wave","type":"related"},{"name":"regulation of regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"regulation of ventricular repolarization","type":"related"}],"termid":"GO:1905024"}


id: GO:0034302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an akinete, a thick-walled (encysted) dormant cell derived from the enlargement of a vegetative cell, is formed. Akinetes typically have granular cytoplasm, are more resistant to environmental extremes than vegetative cells, and are characteristic of several groups of Cyanobacteria.","definition_xrefs":["GOC:mah","PMID:11948167","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"akinete formation","termid":"GO:0034302"}


id: GO:0004748
data:
  {"annotated_genes":["SJAG_02948","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71770],"is_not":false,"summary":null,"term":"GO:0004748"},{"annotations":[88091,102685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["EC:1.17.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBONUCLEOSIDE-DIP-REDUCTI-RXN","Reactome:R-HSA-111751","RHEA:23252","GO:0016961","Reactome:R-HSA-111804","GO:0016960","GO:0016959"],"synonyms":[{"name":"2'-deoxyribonucleoside-diphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-diphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"}],"termid":"GO:0004748","terms_by_termid":{"GO:0004748":null,"GO:0051063":null}}


id: SO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylinosine","secondary_identifiers":["RNAMOD:081"],"synonyms":[{"name":"2'-O-methylinosine","type":"exact"},{"name":"Im","type":"exact"},{"name":"two prime O methylinosine","type":"exact"}],"termid":"SO:0001280"}


id: GO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + H(out)+ = glucose(in) + H(in)+, in response to a stimulus by insulin. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"insulin-responsive glucose:proton symporter activity","synonyms":[{"name":"insulin-responsive hydrogen:glucose symporter activity","type":"exact"},{"name":"insulin-responsive hydrogen:glucose transporter activity","type":"related"},{"name":"transepithelial hydrogen/glucose transporter activity","type":"related"}],"termid":"GO:0005360"}


id: GO:1903767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sweet taste receptor activity.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:16720576","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor complex","termid":"GO:1903768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sweet taste receptor complex","termid":"GO:1903767"}


id: PBO:0064471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 2, accessory subunit","termid":"PBO:0064471"}


id: PBO:0041658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 3","termid":"PBO:0041658"}


id: PBO:0088146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs)","termid":"PBO:0088146"}


id: PR:P28876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pma2 gene.","definition_xrefs":["UniProtKB:P28876","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ATPase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.01c","synonyms":[{"name":"Spom972h-pma2","type":"exact"},{"name":"proton pump 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P28876"}


id: GO:0045703
data:
  {"annotated_genes":["SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93768],"is_not":false,"summary":null,"term":"GO:0045703"}]},"cv_name":"molecular_function","definition":"Catalysis of the reduction of a ketone group to form the corresponding alcohol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00630":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ketoreductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045703","terms_by_termid":{"GO:0045703":null}}


id: PBO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA (N6-adenosine)-methyltransferase (predicted)","termid":"PBO:0000570"}


id: GO:0007228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited.","definition_xrefs":["PMID:11912487","GOC:tb","PMID:15057936","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hh target transcription factor activity (obsolete GO:0007228)","synonyms":[{"name":"activation of hh target transcription factor","type":"exact"},{"name":"positive regulation of hedgehog target transcription factor","type":"exact"}],"termid":"GO:0007228"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: PBO:0085128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein implicated in ribosome biogenesis; deletion extends chronological lifespan","termid":"PBO:0085128"}


id: PBO:0012065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein (predicted)","termid":"PBO:0012065"}


id: PBO:0026682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0026682"}


id: PBO:0048027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen silencer binding protein","termid":"PBO:0048027"}


id: PBO:0091409
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during meiotic recombination Rad51 foci partially colocalize with linear elements","termid":"PBO:0091409"}


id: PBO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal 3'-to-5' phosphorolytic exoribonuclease Rrp41 (predicted)","termid":"PBO:0001910"}


id: PBO:0088024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; required for U1 snRNP biogenesis; contains multiple tetriatricopeptide repeats","termid":"PBO:0088024"}


id: PBO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7","termid":"PBO:0046845"}


id: GO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any TNFSF11-mediated signaling process that increases the rate, frequency, or extent of the ERK1 and ERK2 cascade.","definition_xrefs":["PMID:18606301","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling (obsolete GO:0071848)","synonyms":[{"name":"positive regulation of ERK1 and ERK2 cascade via RANKL-mediated signaling","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signalling","type":"exact"}],"termid":"GO:0071848"}


id: PBO:0028904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028904"}


id: PBO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Response Regulator","termid":"PBO:0016064"}


id: PATO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A limited, often assigned period of activity.","definition_xrefs":["answers.com:answers.com"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000167 bouts (obsolete PATO:0000167)","termid":"PATO:0000167"}


id: GO:0006503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a farnesyl group to the carboxy terminus of a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein farnesylation (obsolete GO:0006503)","synonyms":[{"name":"C-terminal protein farnesylation","type":"exact"}],"termid":"GO:0006503"}


id: PBO:0063656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 13","termid":"PBO:0063656"}


id: PBO:0083985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine synthetase (GS); synthesizes glutamine from glutamate and ammonia; with Glt1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source and by amino acid limitation; forms filaments of back-to-back stacks of cylindrical homo-decamers at low pH, leading to enzymatic inactivation and storage during states of advanced cellular starvation; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0083985"}


id: SO:1000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation (obsolete SO:1000109)","synonyms":[{"name":"mutation causing out of frame polypeptide C terminal elongation","type":"exact"},{"name":"out of frame polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000109"}


id: PBO:0052938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-2","termid":"PBO:0052938"}


id: GO:0031240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the outer membrane that is opposite to the side that faces the periplasm of the cell.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"external side of cell outer membrane","synonyms":[{"name":"external leaflet of cell outer membrane","type":"exact"},{"name":"external side of outer membrane","type":"related"}],"termid":"GO:0031240"}


id: PBO:0069746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1027, pseudogene","termid":"PBO:0069746"}


id: PBO:0058294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4668","termid":"PBO:0058294"}


id: PATO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000190 gait (obsolete PATO:0000190)","termid":"PATO:0000190"}


id: PBO:0080551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 10","termid":"PBO:0080551"}


id: GO:0003923
data:
  {"annotated_genes":["SJAG_00846","SJAG_05278","SJAG_03292","SJAG_03672","SJAG_02776"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83233,87071,87877,99194,109261],"is_not":false,"summary":null,"term":"GO:0003923"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor.","definition_xrefs":["ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"GPI-anchor transamidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162836"],"termid":"GO:0003923","terms_by_termid":{"GO:0003923":null}}


id: SO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a coding genomic variant.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_variant_quality","synonyms":[{"name":"coding variant quality","type":"exact"}],"termid":"SO:0001814"}


id: GO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H+.","definition_xrefs":["RHEA:17157","EC:2.7.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"creatine kinase activity","secondary_identifiers":["MetaCyc:CREATINE-KINASE-RXN","KEGG_REACTION:R01881","Reactome:R-HSA-200326","Reactome:R-HSA-200318"],"synonyms":[{"name":"ATP:creatine N-phosphotransferase activity","type":"related"},{"name":"ATP:creatine phosphotransferase activity","type":"related"},{"name":"BB-CK","type":"related"},{"name":"CK","type":"related"},{"name":"CK-BB","type":"related"},{"name":"CK-MB","type":"related"},{"name":"CK-MM","type":"related"},{"name":"CKMiMi","type":"related"},{"name":"MB-CK","type":"related"},{"name":"MM-CK","type":"related"},{"name":"Mi-CK","type":"related"},{"name":"MiMi-CK","type":"related"},{"name":"adenosine triphosphate-creatine transphosphorylase activity","type":"related"},{"name":"creatine phosphokinase activity","type":"related"},{"name":"creatine phosphotransferase activity","type":"related"},{"name":"phosphocreatine kinase activity","type":"related"}],"termid":"GO:0004111"}


id: PBO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-specific phosphodiesterase Cgs2","termid":"PBO:0005650"}


id: GO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the dorsal motor nucleus of the vagus nerve is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve morphogenesis","termid":"GO:0035762"}


id: PATO:0000491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000491 sensitivity value (obsolete PATO:0000491)","termid":"PATO:0000491"}


id: GO:0140632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inflammasome complex.","definition_xrefs":["PMID:33420033","PMID:33542150","PMID:33420028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"canonical inflammasome complex assembly","termid":"GO:0140632"}


id: GO:1903840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite(3-) stimulus.","definition_xrefs":["GOC:mr","PMID:12106899","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenite ion","termid":"GO:1903842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenite(3-)","termid":"GO:1903840"}


id: GO:0048314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryo sac are generated and organized. The embryo sac develops from the megaspore in heterosporous plants.","definition_xrefs":["GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac morphogenesis","synonyms":[{"name":"female gametophyte morphogenesis","type":"exact"}],"termid":"GO:0048314"}


id: GO:0060502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"lung epithelium development","termid":"GO:0060428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}


id: PBO:0051914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 1 binding protein 1","termid":"PBO:0051914"}


id: MOD:00072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-methylglycine.","definition_xrefs":["PubMed:1593629","RESID:AA0063","ChEBI:15611","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylglycine","synonyms":[{"name":"L-sarcosine","type":"exact"},{"name":"MOD_RES N-methylglycine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methylated glycine","type":"exact"},{"name":"N-methylglycine","type":"exact"},{"name":"NMe1Gly","type":"exact"},{"name":"Sar","type":"exact"},{"name":"Sarcosine","type":"exact"},{"name":"Sarcosyl","type":"exact"},{"name":"methylaminoacetic acid","type":"exact"},{"name":"methylaminoethanoic acid","type":"exact"}],"termid":"MOD:00072"}


id: FYPO:0001250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin is lower than in wild type. In cells with decreased origin firing efficiency, genomic DNA replication initiates from fewer origins than wild type, and is completed in fewer, larger segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18799612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased origin firing efficiency","synonyms":[{"name":"decreased origin firing efficiency during mitotic cell cycle","type":"related"},{"name":"decreased origin firing efficiency during vegetative growth","type":"exact"},{"name":"reduced origin firing efficiency","type":"exact"}],"termid":"FYPO:0001250"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: GO:0098957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"axonal transport of mitochondrion","termid":"GO:0019896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"anterograde axonal transport of mitochondrion","synonyms":[{"name":"anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0098957"}


id: FYPO:0002586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is normal (i.e. indistinguishable from wild type). In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial tRNA 3'-end processing","synonyms":[{"name":"normal mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"normal mitochondrial transfer RNA 3'-end processing","type":"exact"}],"termid":"FYPO:0002586"}


id: PATO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A adhesivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"},{"relation_name":"is_a","term_name":"adhesive","termid":"PATO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased adhesivity","termid":"PATO:0002333"}


id: GO:1990881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:26150418"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990881)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"}],"termid":"GO:1990881"}


id: GO:0000347
data:
  {"annotated_genes":["SJAG_05328","SJAG_04202","SJAG_04310","SJAG_04115","SJAG_04536","SJAG_00992"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75763,97364,114095,75173,106467,111577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000445"}]},"cv_name":"cellular_component","definition":"The THO complex is a nuclear complex that is required for transcription elongation through genes containing tandemly repeated DNA sequences. The THO complex is also part of the TREX (TRanscription EXport) complex that is involved in coupling transcription to export of mRNAs to the cytoplasm. In S. cerevisiae, it is composed of four subunits: Hpr1p, Tho2p, Thp1p, and Mft1p, while the human complex is composed of 7 subunits.","definition_xrefs":["PMID:16983072","PMID:11979277","GOC:krc","PMID:11060033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00992":null,"SJAG_04115":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04536":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"THO complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000347","terms_by_termid":{"GO:0000445":null}}


id: GO:1905667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GOC:TermGenie","PMID:22732145","GO_REF:0000058","GOC:PARL","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to endosome","termid":"GO:1905666"},{"relation_name":"negatively_regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to endosome","synonyms":[{"name":"down regulation of protein localisation in endosome","type":"exact"},{"name":"down regulation of protein localization in endosome","type":"exact"},{"name":"down regulation of protein localization to endosome","type":"exact"},{"name":"down-regulation of protein localisation in endosome","type":"exact"},{"name":"down-regulation of protein localization in endosome","type":"exact"},{"name":"down-regulation of protein localization to endosome","type":"exact"},{"name":"downregulation of protein localisation in endosome","type":"exact"},{"name":"downregulation of protein localization in endosome","type":"exact"},{"name":"downregulation of protein localization to endosome","type":"exact"},{"name":"inhibition of protein localisation in endosome","type":"narrow"},{"name":"inhibition of protein localization in endosome","type":"narrow"},{"name":"inhibition of protein localization to endosome","type":"narrow"},{"name":"negative regulation of protein localisation in endosome","type":"exact"},{"name":"negative regulation of protein localization in endosome","type":"exact"}],"termid":"GO:1905667"}


id: PR:P36631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32C12.02","secondary_identifiers":["PR:000027539","UniProtKB:P36631"],"synonyms":[{"name":"SPBC32C12.02","type":"related"},{"name":"Spom972h-ste11","type":"exact"}],"termid":"PR:P36631"}


id: GO:0031039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains polyploid copies of a portion of the cell's complete genome. Transcription of genes occurs in macronuclei. Some ciliate species may contain multiple macronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"macronucleus","secondary_identifiers":["Wikipedia:Macronucleus"],"termid":"GO:0031039"}


id: PBO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressed by thiamine","termid":"PBO:0003192"}


id: PBO:0091832
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HAP5","termid":"PBO:0091832"}


id: PBO:0043013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase beta","termid":"PBO:0043013"}


id: PBO:0078993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-3","termid":"PBO:0078993"}


id: PBO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 9","termid":"PBO:0071645"}


id: GO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-25 of any form of vitamin D.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vitamin D 25-hydroxylase activity","synonyms":[{"name":"calciferol 25-hydroxylase activity","type":"narrow"},{"name":"cholecalciferol 25-hydroxylase activity","type":"narrow"},{"name":"ergocalciferol 25-hydroxylase activity","type":"narrow"},{"name":"vitamin D2 25-hydroxylase activity","type":"narrow"}],"termid":"GO:0070643"}


id: PBO:0053185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 9","termid":"PBO:0053185"}


id: PR:O94660
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrilase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase nit2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.02","secondary_identifiers":["UniProtKB:O94660"],"synonyms":[{"name":"Spom972h-NIT1","type":"exact"}],"termid":"PR:O94660"}


id: GO:1905600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","PMID:22848640","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905600"}


id: PBO:0041340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 putative open reading frame 36","termid":"PBO:0041340"}


id: PATO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel.","definition_xrefs":["merriam-wester:http://www.merriam-webster.com/dictionary/oblique"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique orientation","termid":"PATO:0002481"}


id: PBO:0057658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1250","termid":"PBO:0057658"}


id: PBO:0055243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2670","termid":"PBO:0055243"}


id: PR:Q9Y820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pci2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain-containing protein C1105.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.07c","synonyms":[{"name":"Spom972h-pci2","type":"exact"}],"termid":"PR:Q9Y820"}


id: CHEBI:29036
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(2+)","termid":"CHEBI:29036"}


id: PBO:0110029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 1","termid":"PBO:0110029"}


id: PATO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having reacted with oxygen, or been modified by oxidation (the reaction in which the atoms of an element lose electrons and the valence of the element increases).","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/oxidized"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized","termid":"PATO:0002223"}


id: FYPO:0004986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur during the meiotic cell cycle. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abolished transcription during meiotic cell cycle","synonyms":[{"name":"abolished meiotic cell cycle gene expression","type":"related"},{"name":"transcription abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004986"}


id: GO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing margin morphogenesis","synonyms":[{"name":"wing margin morphogenesis","type":"exact"}],"termid":"GO:0008587"}


id: PBO:0061294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein, coactivator of histone transcription","termid":"PBO:0061294"}


id: FYPO:0004342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased repeat element RNA level","termid":"FYPO:0003558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased LTR-derived RNA level","synonyms":[{"name":"increased LTR-derived RNA accumulation","type":"related"},{"name":"increased LTR-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased LTR-derived RNA level during vegetative growth","type":"exact"},{"name":"increased LTR-derived transcript level","type":"exact"},{"name":"increased accumulation of LTR-derived RNAs","type":"related"},{"name":"increased long terminal repeat-derived RNA level","type":"exact"}],"termid":"FYPO:0004342"}


id: GO:0033884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: O-phosphoethanolamine + H2O = ethanolamine + phosphate, and phosphocholine + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphoethanolamine/phosphocholine phosphatase activity (obsolete GO:0033884)","synonyms":[{"name":"3X11A","type":"related"},{"name":"PHOSPHO1","type":"related"},{"name":"phosphoethanolamine phosphohydrolase activity","type":"narrow"},{"name":"phosphoethanolamine/phosphocholine phosphatase activity","type":"exact"}],"termid":"GO:0033884"}


id: GO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"positively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion molecule production","termid":"GO:0060355"}


id: GO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the activin family to its receptor on the surface of a target cell, and contributing to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart","GOC:signaling","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete activin receptor signaling pathway involved in heart jogging (obsolete GO:0061372)","synonyms":[{"name":"activin receptor signalling pathway involved in heart jogging","type":"exact"}],"termid":"GO:0061372"}


id: PR:P08965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:9062192","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.03c","secondary_identifiers":["PR:000027568","UniProtKB:P08965"],"synonyms":[{"name":"SPAC27D7.03C","type":"related"},{"name":"Spom972h-mei2","type":"exact"}],"termid":"PR:P08965"}


id: GO:0102917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-reticulinium(1+) + S-adenosyl-L-methionine = H+ + laudanine(1+) + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:10444","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"(S)-reticuline 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8700","EC:2.1.1.291"],"termid":"GO:0102917"}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: GO:1900812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of helvolic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"helvolic acid metabolic process","termid":"GO:1900810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"helvolic acid biosynthetic process","synonyms":[{"name":"Fumigacin anabolism","type":"related"},{"name":"Fumigacin biosynthesis","type":"related"},{"name":"Fumigacin biosynthetic process","type":"related"},{"name":"Fumigacin formation","type":"related"},{"name":"Fumigacin synthesis","type":"related"},{"name":"helvolic acid anabolism","type":"exact"},{"name":"helvolic acid biosynthesis","type":"exact"},{"name":"helvolic acid formation","type":"exact"},{"name":"helvolic acid synthesis","type":"exact"}],"termid":"GO:1900812"}


id: GO:0070682
data:
  {"annotated_genes":["SJAG_02570","SJAG_00954","SJAG_04844"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78770,95018,110993],"is_not":false,"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome regulatory particle complex.","definition_xrefs":["GOC:rb","GOC:mah","PMID:19412159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome assembly","termid":"GO:0043248"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00954":null,"SJAG_02570":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"proteasome regulatory particle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"proteasome regulatory complex assembly","type":"exact"}],"termid":"GO:0070682","terms_by_termid":{"GO:0070682":null}}


id: PBO:0068831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 69, pseudogene","termid":"PBO:0068831"}


id: PBO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-nucleosidyl)-tetraphosphatase","termid":"PBO:0005147"}


id: FYPO:0002919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 36 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abnormal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002918"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"},{"relation_name":"is_a","term_name":"abolished histone H3-K36 methylation","termid":"FYPO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K36 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K36 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K36 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K36me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K36 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K36 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K36 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002919"}


id: MOD:00023
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-phenylalanine.","definition_xrefs":["DeltaMass:0","ChEBI:29997","PubMed:6692818","RESID:AA0014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine residue","synonyms":[{"name":"(2S)-2-amino-3-phenylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-phenylpropanoic acid","type":"exact"},{"name":"L-phenylalanine","type":"exact"},{"name":"Phe","type":"exact"},{"name":"alpha-amino-beta-phenylpropionic acid","type":"exact"}],"termid":"MOD:00023"}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: PBO:0056652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 19","termid":"PBO:0056652"}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


id: GO:0003160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the endocardium is generated and organized. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardium morphogenesis","termid":"GO:0003160"}


id: GO:0106216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["GOC:se","PMID:26195667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"positively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"positive regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106216"}


id: GO:0052869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonic acid + O2 + NADPH + H+ = 20-HETE + NADP+ + H2O. Arachidonic acid is also known as (5Z,8Z,11Z,14Z)-icosatetraenoic acid, and 20-HETE is also known as (5Z,8Z,11Z,14Z)-20-hydroxyicosa-5,8,11,14-tetraenoic acid.","definition_xrefs":["KEGG_REACTION:R07041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid omega-hydroxylase activity","secondary_identifiers":["EC:1.14.15.3"],"synonyms":[{"name":"arachidonic acid hydroxylase activity","type":"broad"},{"name":"arachidonic acid:oxygen 1-oxidoreductase activity","type":"exact"}],"termid":"GO:0052869"}


id: PBO:0054202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1582","termid":"PBO:0054202"}


id: PBO:0002299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54 (predicted)","termid":"PBO:0002299"}


id: PBO:0089125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family minus-end directed microtubule motor Pkl1","termid":"PBO:0089125"}


id: GO:0044270
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id: PBO:0064600
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id: PBO:0040375
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id: FYPO:0001118
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id: PBO:0045085
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id: GO:0010079
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id: PBO:0064501
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id: GO:0048007
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id: PBO:0073606
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id: PBO:0012530
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id: PBO:0049941
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id: PBO:0034417
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id: GO:0032879
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localisation","type":"exact"}],"termid":"GO:0032879","terms_by_termid":{"GO:0017157":null,"GO:0030100":null,"GO:0033157":null,"GO:0035432":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:0045921":null,"GO:0046827":null,"GO:0051209":null,"GO:0061454":null,"GO:0070863":null,"GO:0120047":null,"GO:0140325":null,"GO:0140429":null,"GO:0140434":null,"GO:1900181":null,"GO:1902267":null,"GO:1902424":null,"GO:1902425":null,"GO:1902542":null,"GO:1902543":null,"GO:1902854":null,"GO:1903067":null,"GO:1903077":null,"GO:1903078":null,"GO:1904537":null,"GO:1905341":null,"GO:1905342":null,"GO:1905391":null,"GO:1905406":null,"GO:1905412":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905634":null,"GO:1905665":null,"GO:1905949":null,"GO:2000156":null,"GO:2000185":null,"GO:2000369":null,"GO:2001135":null}}


id: PBO:0059296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 2","termid":"PBO:0059296"}


id: PBO:0030258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_localization","termid":"PBO:0030258"}


id: PBO:0089799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tma23","termid":"PBO:0089799"}


id: GO:0004940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta1-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta1-adrenergic receptor activity","synonyms":[{"name":"beta1 adrenoceptor","type":"exact"}],"termid":"GO:0004940"}


id: PBO:0065403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA5 pseudogene 1","termid":"PBO:0065403"}


id: MOD:00344
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-palmitoylglycine.","definition_xrefs":["PubMed:12574119","RESID:AA0339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino palmitoylated residue","termid":"MOD:01685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoylglycine","synonyms":[{"name":"(hexadecanamido)acetic acid","type":"exact"},{"name":"(hexadecanoylamino)acetic acid","type":"exact"},{"name":"(hexadecanoylamino)ethanoic acid","type":"exact"},{"name":"LIPID N-palmitoyl glycine","type":"exact"},{"name":"N-(1-oxohexadecyl)glycine","type":"exact"},{"name":"N-hexadecanoylated glycine","type":"exact"},{"name":"N-palmitoyl-glycine","type":"exact"},{"name":"N-palmitoylated glycine","type":"exact"},{"name":"NPamGly","type":"exact"}],"termid":"MOD:00344"}


id: FYPO:0000262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells do not respond normally to reactive oxygen species, resulting in accumulation of oxidative damage including DNA damage, during G0 phase.","definition_xrefs":["PomBase:mah","PMID:19197239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress","termid":"FYPO:0000180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to reactive oxygen species during G0","synonyms":[{"name":"abnormal cellular response to reactive oxygen species during cell quiescence","type":"exact"},{"name":"abnormal cellular response to reactive oxygen species during quiescence","type":"exact"},{"name":"protects against physiological oxidative damage in G0","type":"related"}],"termid":"FYPO:0000262"}


id: PBO:0076733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 2","termid":"PBO:0076733"}


id: FYPO:0005336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular histone level","termid":"FYPO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal level of histone H3 in cell","synonyms":[{"name":"normal accumulation of histone H3 in cell","type":"related"},{"name":"normal cellular histone H3 level","type":"exact"},{"name":"normal histone H3 level during vegetative growth","type":"exact"},{"name":"normal level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"normal level of histone H3 in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005336"}


id: GO:0061685
data:
  {"annotated_genes":["SJAG_04846"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78736],"is_not":false,"summary":null,"term":"GO:0061685"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphthine methyl ester + H2O = diphthine + H+ + methanol.","definition_xrefs":["RHEA:42656","GOC:dph","PMID:24739148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diphthine methylesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.1.97"],"termid":"GO:0061685","terms_by_termid":{"GO:0061685":null}}


id: PBO:0059505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase I","termid":"PBO:0059505"}


id: PBO:0044422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 7","termid":"PBO:0044422"}


id: GO:0051500
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73161],"is_not":false,"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tyrosyl-tRNA(Tyr) = D-tyrosine + tRNA(Tyr). Hydrolysis of the removal of D-tyrosine from tyrosine residues in charged tRNA.","definition_xrefs":["PMID:14527667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-aminoacyl-tRNA deacylase activity","termid":"GO:0051499"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140101","GO:0016788","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"D-tyrosyl-tRNA(Tyr) deacylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051500","terms_by_termid":{"GO:0051500":null}}


id: FYPO:0006214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased when germination takes place under conditions of copper ion starvation.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spore germination frequency","termid":"FYPO:0000581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased spore germination frequency during copper ion starvation","synonyms":[{"name":"decreased spore germination during copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during cellular response to copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during copper starvation","type":"exact"},{"name":"decreased spore viability during copper ion starvation","type":"related"},{"name":"reduced spore germination frequency during copper ion starvation","type":"exact"},{"name":"reduced spore viability during copper ion starvation","type":"related"}],"termid":"FYPO:0006214"}


id: GO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-9,10-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzo(a)pyrene 9,10-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034811"}


id: PBO:0074353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 2","termid":"PBO:0074353"}


id: GO:0019577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid metabolic process","synonyms":[{"name":"aldaric acid metabolism","type":"exact"}],"termid":"GO:0019577"}


id: GO:0098889
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic membrane (obsolete GO:0098889)","synonyms":[{"name":"intrinsic to presynaptic membrane","type":"narrow"}],"termid":"GO:0098889"}


id: PBO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain protein Mug57","termid":"PBO:0016997"}


id: PBO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 10","termid":"PBO:0072658"}


id: FYPO:0004951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Brc1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:26368543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Brc1 foci","synonyms":[{"name":"increased number of Brc1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Brc1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0004951"}


id: PR:Q9Y738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein mis12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.04c","synonyms":[{"name":"NMS complex subunit mis12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mis12","type":"exact"}],"termid":"PR:Q9Y738"}


id: _global:symbiotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"_global:participates_in_a_biotic-biotic_interaction_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","secondary_identifiers":["RO:0002440"],"termid":"_global:symbiotically_interacts_with"}


id: GO:0022035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","PMID:15629700","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell migration","termid":"GO:0022035"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: PBO:0011410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-axis_of","termid":"PBO:0011410"}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: PBO:0040073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRDC1 antisense RNA 1","termid":"PBO:0040073"}


id: GO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures and contributes to oriented chondrocyte division in the growth plate.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitotic spindle orientation","termid":"GO:0000132"},{"relation_name":"is_a","term_name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in establishment of planar polarity","termid":"GO:0090176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007163","GO:0007049","GO:0008150","GO:0007010","GO:0051179","GO:0000226"],"is_obsolete":false,"name":"establishment of mitotic spindle orientation involved in growth plate cartilage chondrocyte division","termid":"GO:0003425"}


id: GO:0035778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the pronephric nephron tubule as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:18787069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in pronephros development","termid":"GO:0039014"},{"relation_name":"is_a","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"},{"relation_name":"part_of","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron tubule epithelial cell differentiation","termid":"GO:0035778"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: PBO:0064724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 60","termid":"PBO:0064724"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: FYECO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more substance(s) that are absent from the growth medium, assay buffer, etc. Typically, absence is only specified for substances that would normally be present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping absent","termid":"FYECO:0000120"}


id: GO:0009696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"salicylic acid metabolic process","synonyms":[{"name":"salicylic acid metabolism","type":"exact"}],"termid":"GO:0009696"}


id: PBO:0064650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA1 pseudogene 1","termid":"PBO:0064650"}


id: GO:0097568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane bound, semi-organized microtubule array of unknown function found in Giardia species (trophozoite stage). It is located on the dorsal side of the trophozoite, slightly posterior to the ventral disc.","definition_xrefs":["PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"median body","synonyms":[{"name":"parabasal body","type":"related"}],"termid":"GO:0097568"}


id: PR:P57728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P57728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.11","synonyms":[{"name":"Spom972h-rpl2801","type":"exact"}],"termid":"PR:P57728"}


id: PBO:0049506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 13","termid":"PBO:0049506"}


id: PBO:0026785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ascus_morphology","termid":"PBO:0026785"}


id: GO:0016208
data:
  {"annotated_genes":["SJAG_00605","SJAG_01859","SJAG_02741","SJAG_02785","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70219,73465,76798,84637,111367],"is_not":false,"summary":null,"term":"GO:0016208"}]},"cv_name":"molecular_function","definition":"Binding to AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00605":null,"SJAG_01859":null,"SJAG_02741":null,"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AMP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016208","terms_by_termid":{"GO:0016208":null}}


id: PBO:0067495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 630, pseudogene","termid":"PBO:0067495"}


id: GO:1900381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asperthecin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of asperthecin biosynthetic process","termid":"GO:1900379"},{"relation_name":"positively_regulates","term_name":"asperthecin biosynthetic process","termid":"GO:0036184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of asperthecin biosynthetic process","synonyms":[{"name":"activation of asperthecin biosynthesis","type":"exact"},{"name":"activation of asperthecin biosynthetic process","type":"narrow"},{"name":"activation of asperthecin formation","type":"exact"},{"name":"activation of asperthecin synthesis","type":"exact"},{"name":"positive regulation of asperthecin biosynthesis","type":"exact"},{"name":"positive regulation of asperthecin formation","type":"exact"},{"name":"positive regulation of asperthecin synthesis","type":"exact"},{"name":"up regulation of asperthecin biosynthesis","type":"exact"},{"name":"up regulation of asperthecin biosynthetic process","type":"exact"},{"name":"up regulation of asperthecin formation","type":"exact"},{"name":"up regulation of asperthecin synthesis","type":"exact"},{"name":"up-regulation of asperthecin biosynthesis","type":"exact"},{"name":"up-regulation of asperthecin biosynthetic process","type":"exact"},{"name":"up-regulation of asperthecin formation","type":"exact"},{"name":"up-regulation of asperthecin synthesis","type":"exact"},{"name":"upregulation of asperthecin biosynthesis","type":"exact"},{"name":"upregulation of asperthecin biosynthetic process","type":"exact"},{"name":"upregulation of asperthecin formation","type":"exact"},{"name":"upregulation of asperthecin synthesis","type":"exact"}],"termid":"GO:1900381"}


id: GO:0032144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity.","definition_xrefs":["PMID:15528998","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"4-aminobutyrate transaminase complex","synonyms":[{"name":"ABAT complex","type":"exact"},{"name":"GABA transaminase complex","type":"exact"},{"name":"GABA-T complex","type":"exact"}],"termid":"GO:0032144"}


id: FYPO:0003959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of diacylglycerol O-acyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal diacylglycerol O-acyltransferase activity","termid":"FYPO:0003958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased diacylglycerol O-acyltransferase activity","synonyms":[{"name":"decreased DGAT activity","type":"exact"},{"name":"decreased diacylglycerol acyltransferase activity","type":"broad"},{"name":"reduced diacylglycerol O-acyltransferase activity","type":"exact"}],"termid":"FYPO:0003959"}


id: PBO:0084350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the nuclear mRNA cap-binding protein complex; interacts with Npl3p to carry nuclear poly(A)+ mRNA to cytoplasm; also involved in nuclear mRNA degradation and telomere maintenance; orthologous to mammalian CBP80","termid":"PBO:0084350"}


id: GO:1905943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:19737525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"negatively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of growth cone in injured axon","synonyms":[{"name":"down regulation of formation of growth cone in injured axon","type":"exact"},{"name":"down-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"downregulation of formation of growth cone in injured axon","type":"exact"},{"name":"inhibition of formation of growth cone in injured axon","type":"narrow"}],"termid":"GO:1905943"}


id: GO:0007116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and growth of cell buds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell division","termid":"GO:0051302"},{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell budding","synonyms":[{"name":"regulation of budding","type":"broad"}],"termid":"GO:0007116"}


id: GO:0016530
data:
  {"annotated_genes":["SJAG_03296","SJAG_04553","SJAG_01418","SJAG_03862","SJAG_02994","SJAG_02895","SJAG_04403","SJAG_00449","SJAG_03231"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94493,95563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140663"},{"annotations":[102906,97625,100179,84780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016531"},{"annotations":[96092,109197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034986"},{"annotations":[88768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein.","definition_xrefs":["PMID:11739376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_01418":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03231":null,"SJAG_03296":null,"SJAG_03862":null,"SJAG_04403":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"metallochaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016530","terms_by_termid":{"GO:0016531":null,"GO:0016532":null,"GO:0034986":null,"GO:0140663":null}}


id: GO:1902914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein polyubiquitination.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23645667","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein polyubiquitination","synonyms":[{"name":"regulation of polyubiquitin","type":"related"},{"name":"regulation of protein polyubiquitinylation","type":"exact"},{"name":"regulation of protein polyubiquitylation","type":"exact"}],"termid":"GO:1902914"}


id: PBO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, TRAMP complex subunit Mtr4","termid":"PBO:0000921"}


id: PBO:0039856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 22","termid":"PBO:0039856"}


id: PBO:0011523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase Rrg1 (predicted)","termid":"PBO:0011523"}


id: GO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}


id: GO:2001050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of tendon cell differentiation","termid":"GO:2001049"},{"relation_name":"negatively_regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tendon cell differentiation","synonyms":[{"name":"negative regulation of muscle attachment cell differentiation","type":"exact"},{"name":"negative regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001050"}


id: PBO:0079705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 1","termid":"PBO:0079705"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: PBO:0078261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon ACA) 1-1","termid":"PBO:0078261"}


id: PBO:0110168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1 co-chaperone for EF-1 alpha folding","termid":"PBO:0110168"}


id: GO:0051267
data:
  {"annotated_genes":["SJAG_02523"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76446],"is_not":false,"summary":null,"term":"GO:0051267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine phosphate + Man-alpha-(1,2)-Man-alpha-(1,2)-Man-alpha-(1,6)-R = Man-alpha-(1,2)-Man-alpha-6-P-EtN-(1,2)-Man-alpha-(1,6)-R; R is Man-alpha(1,4)-GlcNH2-inositol-PO4-lipid. This reaction is the transfer of ethanolamine phosphate to C6 of second mannose in the GPI lipid precursor CP2.","definition_xrefs":["PMID:14985347","PMID:15452134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose-ethanolamine phosphotransferase activity","termid":"GO:0051377"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CP2 mannose-ethanolamine phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"CP2 EtN-P transferase activity","type":"exact"},{"name":"CP2 ethanolamine phosphate transferase activity","type":"exact"},{"name":"CP2 phosphoethanolamine transferase activity","type":"exact"},{"name":"addition of ethanolamine phosphate to mannose of GPI precursor CP2","type":"exact"},{"name":"gpi7 activity","type":"related"}],"termid":"GO:0051267","terms_by_termid":{"GO:0051267":null}}


id: PBO:0040354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 3","termid":"PBO:0040354"}


id: PBO:0050217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 34","termid":"PBO:0050217"}


id: PBO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 2","termid":"PBO:0004411"}


id: PBO:0027063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0027063"}


id: GO:0140721
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a nuclease.","definition_xrefs":["PMID:29554913","PMID:30046034","PMID:28785032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"nuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140721","terms_by_termid":{"GO:0008428":null}}


id: FYPO:0005471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate synthase activity using NADH as a cofactor is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate synthase (NADH) activity","termid":"FYPO:0005470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished glutamate synthase (NADH) activity","synonyms":[{"name":"abolished L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abolished NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abolished NADH: GOGAT activity","type":"related"},{"name":"abolished glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"},{"name":"glutamate synthase (NADH) activity abolished","type":"exact"}],"termid":"FYPO:0005471"}


id: GO:0140874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paraherquonin, a meroterpenoid with a unique, highly congested hexacyclic molecular architecture.","definition_xrefs":["PMID:27602587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"paraherquonin biosynthetic process","synonyms":[{"name":"paraherquonin anabolism","type":"exact"},{"name":"paraherquonin biosynthesis","type":"exact"},{"name":"paraherquonin formation","type":"exact"},{"name":"paraherquonin synthesis","type":"exact"}],"termid":"GO:0140874"}


id: GO:0010913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of sterigmatocystin biosynthesis. Sterigmatocystin biosynthetic processes are the chemical reactions and pathways resulting in the formation of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"}


id: PBO:0049340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 5","termid":"PBO:0049340"}


id: PBO:0045383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP4 divergent transcript","termid":"PBO:0045383"}


id: PBO:0084247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase; catalyzes the breakdown of IMP to inosine; responsible for production of nicotinamide riboside and nicotinic acid riboside; expression positively regulated by nicotinic acid and glucose availability; does not show similarity to known 5'-nucleotidases from other organisms","termid":"PBO:0084247"}


id: PBO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit, Spc105/KNL-1 family member, blinkin, Spc7","termid":"PBO:0018138"}


id: PBO:0081039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 15","termid":"PBO:0081039"}


id: PBO:0109106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial UbiB/ABC kinase -like family family membrane protein contact site protein Cqd1","termid":"PBO:0109106"}


id: PBO:0025463
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage cardiomyopathy","termid":"PBO:0025463"}


id: GO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the protoxylem over time, from its formation to the mature structure. The protoxylem comprises the first formed elements of the primary xylem.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem development","termid":"GO:0010089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoxylem development","termid":"GO:0090059"}


id: PBO:0083825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; phosphorylated during the cell cycle by cyclin-dependent kinases; sumoylated in an Mms21p-dependent manner; protein abundance increases in response to DNA replication stress","termid":"PBO:0083825"}


id: PBO:0003040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin","termid":"PBO:0003040"}


id: MOD:01948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and two L-serine residues by a thioether bond and a carbon-carbon bond to form labionin.","definition_xrefs":["PubMed:20082397","RESID:AA0594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labionin","synonyms":[{"name":"(2S,4S)-2,4-diamino-2-[([(2R)-2-amino-2-carboxyethyl]sulfanyl)methyl]pentanedioic acid","type":"exact"},{"name":"(2S,4S,8R)-2,4,8-triamino-4-carboxy-6-thianonanedioic acid","type":"exact"},{"name":"(2S,4S,8R)-labionin","type":"exact"},{"name":"labionin","type":"exact"}],"termid":"MOD:01948"}


id: PBO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108F (pseudogene)","termid":"PBO:0044817"}


id: PBO:0057509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 627","termid":"PBO:0057509"}


id: PBO:0025422
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid metabolism disorders","termid":"PBO:0025422"}


id: GO:0015021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate; appears to act on linkages between N-acetyl-D-glucosamine and uronate. Product is an unsaturated sugar.","definition_xrefs":["EC:4.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"heparin-sulfate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.8-RXN"],"synonyms":[{"name":"[heparan sulfate]-sulfate lyase activity","type":"related"},{"name":"heparin-sulfate eliminase activity","type":"related"},{"name":"heparin-sulphate lyase activity","type":"exact"},{"name":"heparitin-sulfate lyase activity","type":"exact"},{"name":"heparitinase I","type":"related"},{"name":"heparitinase II","type":"related"}],"termid":"GO:0015021"}


id: PBO:0081873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 815, pseudogene","termid":"PBO:0081873"}


id: GO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-acylglutathione + H2O = a carboxylate + glutathione + H+.","definition_xrefs":["RHEA:22708","EC:3.1.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutathione thiolesterase activity","secondary_identifiers":["MetaCyc:GLUTATHIONE-THIOESTERASE-RXN","KEGG_REACTION:R00547"],"synonyms":[{"name":"S-acylglutathione hydrolase activity","type":"related"},{"name":"citryl-glutathione thioesterhydrolase activity","type":"related"},{"name":"glutathione thioesterase activity","type":"exact"}],"termid":"GO:0047951"}


id: PBO:0075384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX30 pseudogene 1","termid":"PBO:0075384"}


id: PBO:0051754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase 3","termid":"PBO:0051754"}


id: GO:0008379
data:
  {"annotated_genes":["SJAG_01199","SJAG_00141","SJAG_03166","SJAG_01216","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70277,75105,78143,90800,104235],"is_not":false,"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-dithiol + hydrogen peroxide = [thioredoxin]-disulfide + H2O.","definition_xrefs":["RHEA:63528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioredoxin-dependent peroxiredoxin activity","termid":"GO:0140824"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0051920"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0051920"],"is_obsolete":false,"name":"thioredoxin peroxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3341343","GO:0009031","MetaCyc:RXN0-267","Reactome:R-HSA-2161612","Reactome:R-HSA-3322995","Reactome:R-HSA-3697882","Reactome:R-HSA-3697894"],"synonyms":[{"name":"TPx activity","type":"exact"},{"name":"TrxPx activity","type":"exact"},{"name":"thiol peroxidase activity","type":"exact"}],"termid":"GO:0008379","terms_by_termid":{"GO:0008379":null}}


id: SO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 28S rRNA is an RNA component of the large subunit of cytosolic ribosomes in metazoan eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_28S_gene","termid":"SO:0002239"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_28S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/28S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 28S LSU rRNA","type":"exact"},{"name":"cytosolic 28S rRNA","type":"exact"},{"name":"cytosolic 28S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 28S","type":"exact"}],"termid":"SO:0000653"}


id: GO:0141140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of the immunoglobulin-mediated immune response of the host organism. One common mechanism by which this happens is the direct inhibition of immunoglobulin activity, by direct binding or modification. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24753590","PMID:18426869","PMID:22256861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host immunoglobulin-mediated immune response","synonyms":[{"name":"symbiont-mediated suppression of host immunoglobulin activity","type":"related"}],"termid":"GO:0141140"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: GO:0015180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-alanine from one side of a membrane to the other. L-alanine is the L-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators","GOC:jsg","GOC:mah","GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-alanine transmembrane transporter activity","synonyms":[{"name":"L-alanine transporter activity","type":"broad"}],"termid":"GO:0015180"}


id: FYPO:0003730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on galactose carbon source","termid":"FYPO:0000251"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"abolished cell population growth on galactose carbon source","synonyms":[{"name":"abolished galactose utilization","type":"related"},{"name":"abolished growth on galactose carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on galactose carbon source","type":"exact"},{"name":"cell population growth on galactose carbon source abolished","type":"exact"}],"termid":"FYPO:0003730"}


id: GO:0009575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a chromoplast but excluding the photosynthetic material.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast stroma","termid":"GO:0009575"}


id: PBO:0057124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 208a","termid":"PBO:0057124"}


id: PBO:0003283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein (predicted)","termid":"PBO:0003283"}


id: GO:0050940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of late stripe melanocyte differentiation","synonyms":[{"name":"regulation of late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050940"}


id: PBO:0029493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_meiosis_II_spindle","termid":"PBO:0029493"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: GO:0010202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low fluence red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Low fluence red light is defined in this case as short pulses of red light followed by darkness, providing a light level of 0.001-0.1 mmol/m2/sec.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"response to red light","termid":"GO:0010114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low fluence red light stimulus","termid":"GO:0010202"}


id: SO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a nuclear pseudogene of a mitochndrial gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000899 nuclear_mitochondrial (obsolete SO:0000899)","synonyms":[{"name":"nuclear mitochondrial","type":"exact"}],"termid":"SO:0000899"}


id: MOD:01323
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:256#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionaldehyde +40","termid":"MOD:00579"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionaldehyde +40 - site H","synonyms":[{"name":"Delta:H(4)C(3)","type":"related"},{"name":"Propionaldehyde +40","type":"related"}],"termid":"MOD:01323"}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: PBO:0063251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 2","termid":"PBO:0063251"}


id: GO:1900665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emodin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emodin biosynthetic process","termid":"GO:1900664"},{"relation_name":"negatively_regulates","term_name":"emodin biosynthetic process","termid":"GO:1900575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of emodin biosynthetic process","synonyms":[{"name":"down regulation of emodin anabolism","type":"exact"},{"name":"down regulation of emodin biosynthesis","type":"exact"},{"name":"down regulation of emodin biosynthetic process","type":"exact"},{"name":"down regulation of emodin formation","type":"exact"},{"name":"down regulation of emodin synthesis","type":"exact"},{"name":"down-regulation of emodin anabolism","type":"exact"},{"name":"down-regulation of emodin biosynthesis","type":"exact"},{"name":"down-regulation of emodin biosynthetic process","type":"exact"},{"name":"down-regulation of emodin formation","type":"exact"},{"name":"down-regulation of emodin synthesis","type":"exact"},{"name":"downregulation of emodin anabolism","type":"exact"},{"name":"downregulation of emodin biosynthesis","type":"exact"},{"name":"downregulation of emodin biosynthetic process","type":"exact"},{"name":"downregulation of emodin formation","type":"exact"},{"name":"downregulation of emodin synthesis","type":"exact"},{"name":"inhibition of emodin anabolism","type":"exact"},{"name":"inhibition of emodin biosynthesis","type":"exact"},{"name":"inhibition of emodin biosynthetic process","type":"narrow"},{"name":"inhibition of emodin formation","type":"exact"},{"name":"inhibition of emodin synthesis","type":"exact"},{"name":"negative regulation of emodin anabolism","type":"exact"},{"name":"negative regulation of emodin biosynthesis","type":"exact"},{"name":"negative regulation of emodin formation","type":"exact"},{"name":"negative regulation of emodin synthesis","type":"exact"}],"termid":"GO:1900665"}


id: GO:0106299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An active host response phase of acute inflammation driven by specialized pro-resolving mediators (SPMs) and signaling pathways, enabling timely tissue regeneration and return of function.","definition_xrefs":["PMID:28087575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"resolution phase response","termid":"GO:0106299"}


id: PBO:0061735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoredoxin like 2","termid":"PBO:0061735"}


id: GO:0010800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"positively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-threonine phosphorylation","termid":"GO:0010800"}


id: GO:1901803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1,5-anhydro-D-fructose.","definition_xrefs":["UniPathway:UPA00738","GOC:TermGenie","MetaCyc:PWY-6992","GOC:yaf","PMID:15716041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose biosynthetic process","synonyms":[{"name":"1,5-anhydro-D-fructose anabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose biosynthesis","type":"exact"},{"name":"1,5-anhydro-D-fructose formation","type":"exact"},{"name":"1,5-anhydro-D-fructose synthesis","type":"exact"}],"termid":"GO:1901803"}


id: GO:2000442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 15 signaling pathway","termid":"GO:2000440"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"positive regulation of TLR15 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000442"}


id: PBO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated 62","termid":"PBO:0044108"}


id: PBO:0053155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase C","termid":"PBO:0053155"}


id: PBO:0002771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II, and III subunit Rpb10","termid":"PBO:0002771"}


id: GO:0042043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurexin, a synaptic cell surface protein related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.","definition_xrefs":["PMID:18923512","GOC:pr","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neurexin family protein binding","secondary_identifiers":["GO:0019963"],"synonyms":[{"name":"neuroligin","type":"related"}],"termid":"GO:0042043"}


id: GO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nitrite transport","termid":"GO:0015707"}


id: PBO:0078073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking kinesin protein 2","termid":"PBO:0078073"}


id: PBO:0027925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation_in_h+_cells","termid":"PBO:0027925"}


id: PR:O59831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cationic amino acid transporter 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C965.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.11c","secondary_identifiers":["UniProtKB:O59831"],"synonyms":[{"name":"Spom972h-SLC7A2","type":"exact"}],"termid":"PR:O59831"}


id: PBO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_and_duration_of_protein-protein_interaction","termid":"PBO:0035737"}


id: GO:0051748
data:
  {"annotated_genes":["SJAG_01089","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60139,109743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003983"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + a monosaccharide 1-phosphate = diphosphate + UDP-monosaccharide.","definition_xrefs":["EC:2.7.7.64","PMID:15326166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2.7.7.64-RXN","RHEA:13205"],"synonyms":[{"name":"PsUSP","type":"related"},{"name":"UDP-monosaccharide diphosphorylase activity","type":"exact"},{"name":"UDP-monosaccharide pyrophosphorylase activity","type":"exact"},{"name":"UDP-sugar pyrophosphorylase activity","type":"related"},{"name":"USP","type":"related"}],"termid":"GO:0051748","terms_by_termid":{"GO:0003983":null}}


id: PBO:0066002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGAPA1 pseudogene 1","termid":"PBO:0066002"}


id: PBO:0051697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit E","termid":"PBO:0051697"}


id: GO:2000329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 cell lineage commitment.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 17 cell differentiation","termid":"GO:2000320"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 cell lineage commitment","termid":"GO:2000328"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 cell lineage commitment","termid":"GO:0072540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 cell lineage commitment","synonyms":[{"name":"negative regulation of T-helper 17 cell fate commitment","type":"exact"},{"name":"negative regulation of Th17 cell lineage commitment","type":"exact"},{"name":"negative regulation of Th17 fate commitment","type":"exact"}],"termid":"GO:2000329"}


id: GO:0051723
data:
  {"annotated_genes":["SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051722"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein amino acid methyl ester + H2O = protein amino acid + methanol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"protein methylesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5367022"],"synonyms":[{"name":"PME activity","type":"related"},{"name":"protein carboxyl methylesterase activity","type":"related"},{"name":"protein carboxylic ester hydrolase activity","type":"exact"},{"name":"protein methyl-esterase activity","type":"related"}],"termid":"GO:0051723","terms_by_termid":{"GO:0051722":null}}


id: PBO:0088606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear bridge Ish domain protein Les1","termid":"PBO:0088606"}


id: GO:0032635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-6 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-6 production","secondary_identifiers":["GO:0042226","GO:0072604"],"synonyms":[{"name":"IL-6 production","type":"exact"},{"name":"interleukin-6 biosynthetic process","type":"narrow"},{"name":"interleukin-6 secretion","type":"narrow"}],"termid":"GO:0032635"}


id: PBO:0072867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyltransferase 1","termid":"PBO:0072867"}


id: PBO:0016991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016991"}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: PBO:0048430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta 1","termid":"PBO:0048430"}


id: PBO:0005816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Csl4 (predicted)","termid":"PBO:0005816"}


id: PBO:0058375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4747","termid":"PBO:0058375"}


id: PBO:0076512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 13","termid":"PBO:0076512"}


id: GO:0009602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiont (an organism living in close physical association with an organism of a different species) is received and converted into a molecular signal. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiont","secondary_identifiers":["GO:0051855"],"synonyms":[{"name":"perception of symbiont","type":"related"},{"name":"recognition of symbiont","type":"exact"}],"termid":"GO:0009602"}


id: PBO:0028622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2-type_prespliceosome_assembly","termid":"PBO:0028622"}


id: PBO:0087656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HIR complex; HIR is a nucleosome assembly complex involved in regulation of histone gene transcription; contributes to nucleosome formation, heterochromatic gene silencing, and formation of functional kinetochores","termid":"PBO:0087656"}


id: GO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"taste bud development","termid":"GO:0061193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud morphogenesis","termid":"GO:0061194"}


id: PBO:0056825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14C, pseudogene","termid":"PBO:0056825"}


id: PBO:0085508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S11 and bacterial S17; N-terminally propionylated in vivo; RPS11A has a paralog, RPS11B, that arose from the whole genome duplication","termid":"PBO:0085508"}


id: FYPO:0003536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population in stationary phase. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index in stationary phase","synonyms":[{"name":"increased septation in stationary phase","type":"related"},{"name":"increased septation index during stationary phase","type":"exact"},{"name":"septated in stationary phase","type":"related"}],"termid":"FYPO:0003536"}


id: GO:1990075
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane region adjacent to the base of eukaryotic cilia and flagella that is enriched in endocytosis-associated proteins and vesicles and that appears to regulate ciliary membrane homeostasis.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:dr","PMID:22342749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"periciliary membrane compartment","synonyms":[{"name":"PCMC","type":"exact"}],"termid":"GO:1990075"}


id: GO:0035234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo.","definition_xrefs":["PMID:12814944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectopic germ cell programmed cell death","synonyms":[{"name":"programmed cell death of ectopic germ cells","type":"exact"},{"name":"programmed cell death, ectopic germ cells","type":"exact"}],"termid":"GO:0035234"}


id: GO:1903983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases the length of a microvillus.","definition_xrefs":["GOC:als","PMID:22114352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microvillus length","synonyms":[{"name":"activation of regulation of microvillus length","type":"narrow"},{"name":"up regulation of regulation of microvillus length","type":"exact"},{"name":"up-regulation of regulation of microvillus length","type":"exact"},{"name":"upregulation of regulation of microvillus length","type":"exact"}],"termid":"GO:1903983"}


id: SO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant whereby the effect is evaluated with respect to a reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_variant","termid":"SO:0001060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_effect_variant","synonyms":[{"name":"functional effect variant","type":"exact"},{"name":"functional variant","type":"exact"}],"termid":"SO:0001536"}


id: PBO:0045182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B3","termid":"PBO:0045182"}


id: FYPO:0002006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular iron level","synonyms":[{"name":"increased cellular iron ion level","type":"exact"},{"name":"increased cellular iron level during mitotic cell cycle","type":"related"},{"name":"increased cellular iron level during vegetative growth","type":"exact"},{"name":"increased iron accumulation","type":"related"}],"termid":"FYPO:0002006"}


id: GO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, lectin pathway","synonyms":[{"name":"complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001867"}


id: GO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nitric-oxide synthase binding","synonyms":[{"name":"NOS binding","type":"exact"}],"termid":"GO:0050998"}


id: FYECO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a copper chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ copper chelator","synonyms":[{"name":"+ tetrathiomolybdate","type":"narrow"}],"termid":"FYECO:0000321"}


id: PBO:0046053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 1","termid":"PBO:0046053"}


id: PBO:0063738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 3","termid":"PBO:0063738"}


id: PBO:0073643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 30, pseudogene","termid":"PBO:0073643"}


id: PBO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 24 (pseudogene)","termid":"PBO:0045613"}


id: SO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The primary transcript of any one of several small cytoplasmic RNA molecules present in the cytoplasm and sometimes nucleus of a Eukaryote.","direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_primary_transcript","synonyms":[{"name":"scRNA primary transcript","type":"exact"},{"name":"scRNA transcript","type":"exact"},{"name":"small cytoplasmic RNA","type":"related"},{"name":"small cytoplasmic RNA transcript","type":"exact"},{"name":"small_cytoplasmic_RNA","type":"related"}],"termid":"SO:0000012"}


id: PBO:0082182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC-type S/T protein kinase; participates in the cell wall integrity signaling pathway; involved with Ypk1p in the TORC-dependent phosphorylation of ribosomal proteins Rps6a/b (S6), and in the direct phosphorylation of the Myo5p motor domain TEDS site; phosphorylated and activated by Pkh1/2p in the presence of phytosphingosine; direct phosphorylation by Tor2p regulates actin polarization; genetically redundant with YPK1; human homolog SGK2 can complement the inviability of a ypk1 ypk2 mutant","termid":"PBO:0082182"}


id: PBO:0048149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYN binding protein 1","termid":"PBO:0048149"}


id: FYPO:0002384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 5, 8, 12 and 16 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:23851719","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002384)","synonyms":[{"name":"increased histone H4 acetylation (K5, K8, K12 and K16) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5/8/12/16 acetylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4K5, H4K8, H4K12 and H4K16 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002384"}


id: GO:0007488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the histoblast disc are generated and organized. This includes the transformation of histoblast cells into adult structures during pupal metamorphosis. Histoblast cells are cells founded in the embryo that are the progenitors to the adult abdomen.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histoblast morphogenesis","synonyms":[{"name":"histoblast metamorphosis","type":"exact"}],"termid":"GO:0007488"}


id: GO:0097649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complete microtubule with 13 protofilaments that fuses with an incomplete microtubule called B tubule (containing 10 protofilaments only) to form an axonemal outer doublet. Inner and outer dynein arms, as well as the radial spoke, are attached to the A tubule.","definition_xrefs":["GOC:cilia","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal outer doublet","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"A axonemal microtubule","synonyms":[{"name":"A tubule","type":"broad"}],"termid":"GO:0097649"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: FYPO:0006643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles and elongates during prophase, but does not elongate further and eventually collapses during metaphase.","definition_xrefs":["PomBase:mah","PMID:28178520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during metaphase","synonyms":[{"name":"broken mitotic spindle without elongation during metaphase","type":"related"},{"name":"mitotic spindle breakage without elongation during metaphase","type":"exact"},{"name":"mitotic spindle collapse without elongation during metaphase during vegetative growth","type":"exact"},{"name":"mitotic spindle collapse without extension during metaphase","type":"exact"},{"name":"spindle collapse without elongation during metaphase during mitotic cell cycle","type":"related"},{"name":"spindle collapse without elongation during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006643"}


id: GO:0045228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides in the slime layer, a diffused layer of polysaccharide exterior to the bacterial cell wall.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular polysaccharide biosynthetic process","termid":"GO:0045226"},{"relation_name":"is_a","term_name":"slime layer organization","termid":"GO:0045231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"slime layer polysaccharide biosynthetic process","synonyms":[{"name":"slime layer polysaccharide anabolism","type":"exact"},{"name":"slime layer polysaccharide biosynthesis","type":"exact"},{"name":"slime layer polysaccharide formation","type":"exact"},{"name":"slime layer polysaccharide synthesis","type":"exact"}],"termid":"GO:0045228"}


id: GO:0010231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that maintains a seed in a dormant state.","definition_xrefs":["PMID:9580097","ISBN:9781405139830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seed dormancy process","termid":"GO:0010162"},{"relation_name":"is_a","term_name":"maintenance of dormancy","termid":"GO:0097437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of seed dormancy","termid":"GO:0010231"}


id: GO:0072461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic recombination checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic recombination checkpoint signaling","termid":"GO:0051598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"response to meiotic recombination checkpoint signaling","synonyms":[{"name":"meiotic recombination checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic recombination checkpoint","type":"exact"}],"termid":"GO:0072461"}


id: PBO:0030644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pH","termid":"PBO:0030644"}


id: PBO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 3","termid":"PBO:0072274"}


id: GO:0140826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of zinc from one side of a membrane to the other according to the reaction: H+(out) + Zn2+(in) = H+(in) + Zn2+(out).","definition_xrefs":["PMID:19366695","PMID:30893306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"zinc:proton antiporter activity","termid":"GO:0140826"}


id: PBO:0049623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 26","termid":"PBO:0049623"}


id: FYPO:0001777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"short eisosome filament","synonyms":[{"name":"decreased eisosome filament length","type":"exact"},{"name":"short eisosome filament during mitotic cell cycle","type":"related"},{"name":"short eisosome filament during vegetative growth","type":"exact"},{"name":"short linear eisosomes","type":"exact"}],"termid":"FYPO:0001777"}


id: GO:0003337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","synonyms":[{"name":"metanephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0003337"}


id: PBO:0087241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protease and general molecular chaperone; cleaves Roq1p, which modifies the substrate specificity of the Ubr1p Ub-ligase, promoting the stress-induced homeostatically-regulated protein degradation (SHRED) of misfolded and native ER-membrane and cytosolic proteins; chaperone activity involved in the heat stress response; promotes apoptosis through proteolysis of Bir1p; role in lipid homeostasis; mammalian Omi/HtrA2 serine protease family member","termid":"PBO:0087241"}


id: PBO:0059287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 2","termid":"PBO:0059287"}


id: GO:1902624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil migration.","definition_xrefs":["PMID:1826836","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"positively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil migration","synonyms":[{"name":"activation of neutrophil migration","type":"narrow"},{"name":"up regulation of neutrophil migration","type":"exact"},{"name":"up-regulation of neutrophil migration","type":"exact"},{"name":"upregulation of neutrophil migration","type":"exact"}],"termid":"GO:1902624"}


id: PBO:0058556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6165","termid":"PBO:0058556"}


id: GO:0110125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of myotube cell migration.","definition_xrefs":["GOC:ha","PMID:29122742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of myotube cell migration","termid":"GO:0110123"},{"relation_name":"negatively_regulates","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube cell migration","termid":"GO:0110125"}


id: PBO:0083402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the 3' end of essential gene CDC13","termid":"PBO:0083402"}


id: PR:Q06182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q06182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.15c","synonyms":[{"name":"Spom972h-swi10","type":"exact"}],"termid":"PR:Q06182"}


id: GO:0042622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane surrounding the outer segment of a vertebrate photoreceptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary membrane","termid":"GO:0060170"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"photoreceptor outer segment membrane","termid":"GO:0042622"}


id: PBO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 31","termid":"PBO:0050214"}


id: GO:0052098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by an organism of a cellular component or anatomical structure for the purpose of obtaining nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation by host of specialized structure for nutrient acquisition from symbiont","termid":"GO:0052098"}


id: GO:0098821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the bone morphogenetic protein (BMP) family, and transmitting a signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:dos","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0140096","GO:0016740","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"BMP receptor activity","termid":"GO:0098821"}


id: PBO:0080583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 6","termid":"PBO:0080583"}


id: PBO:0073670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein alpha","termid":"PBO:0073670"}


id: PBO:0058407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4776-2","termid":"PBO:0058407"}


id: PR:O13926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.06c gene.","definition_xrefs":["UniProtKB:O13926","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0665 family protein C23C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.06c","synonyms":[{"name":"Spom972h-SPAC23C4.06c","type":"exact"}],"termid":"PR:O13926"}


id: GO:0075280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uredinium development","termid":"GO:0075280"}


id: GO:0071036
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70198,70719],"is_not":false,"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nucleolar RNA (snoRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snoRNA.","definition_xrefs":["GOC:dgf","PMID:15935758","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA catabolic process","termid":"GO:0016077"},{"relation_name":"is_a","term_name":"nuclear polyadenylation-dependent ncRNA catabolic process","termid":"GO:0071046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snoRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"nuclear poly(A)-dependent snoRNA catabolic process","type":"related"}],"termid":"GO:0071036","terms_by_termid":{"GO:0071036":null}}


id: PBO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1 like","termid":"PBO:0048807"}


id: GO:0007040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole organization","termid":"GO:0080171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosome organization","synonyms":[{"name":"lysosome organisation","type":"exact"},{"name":"lysosome organization and biogenesis","type":"related"}],"termid":"GO:0007040"}


id: PBO:0040584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BABAM2 antisense RNA 1","termid":"PBO:0040584"}


id: FYPO:0001173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abolished.","definition_xrefs":["PomBase:mah","GO:0036261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal 7-methylguanosine cap hypermethylation","termid":"FYPO:0001172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"abolished 7-methylguanosine cap hypermethylation","synonyms":[{"name":"2,2,7-trimethylguanosine cap formation abolished","type":"exact"},{"name":"7-methylguanosine cap hypermethylation abolished","type":"exact"},{"name":"7-methylguanosine cap hypermethylation abolished during vegetative growth","type":"exact"},{"name":"TMG cap formation abolished","type":"exact"},{"name":"abolished 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"conversion of m(7)G to m(3)G abolished","type":"exact"},{"name":"snRNA capping abolished","type":"narrow"},{"name":"snoRNA capping abolished","type":"narrow"}],"termid":"FYPO:0001173"}


id: GO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a meprin and TRAF homology (MATH) domain.","definition_xrefs":["InterPro:IPR002083","PMID:22621901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MATH domain binding","termid":"GO:0090736"}


id: GO:0018738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-formylglutathione + H2O = formate + glutathione + H+.","definition_xrefs":["EC:3.1.2.12","RHEA:14961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"S-formylglutathione hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0241","MetaCyc:S-FORMYLGLUTATHIONE-HYDROLASE-RXN","Reactome:R-HSA-5693724","KEGG_REACTION:R00527"],"termid":"GO:0018738"}


id: GO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleoside metabolic process","synonyms":[{"name":"activation of nucleoside metabolic process","type":"narrow"},{"name":"positive regulation of nucleoside metabolism","type":"exact"},{"name":"stimulation of nucleoside metabolic process","type":"narrow"},{"name":"up regulation of nucleoside metabolic process","type":"exact"},{"name":"up-regulation of nucleoside metabolic process","type":"exact"},{"name":"upregulation of nucleoside metabolic process","type":"exact"}],"termid":"GO:0045979"}


id: GO:0004053
data:
  {"annotated_genes":["SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70659],"is_not":false,"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea.","definition_xrefs":["EC:3.5.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"arginase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70569","MetaCyc:ARGINASE-RXN","Reactome:R-HSA-452036","RHEA:20569"],"synonyms":[{"name":"L-arginase activity","type":"related"},{"name":"L-arginine amidinohydrolase activity","type":"related"},{"name":"arginine amidinase activity","type":"related"},{"name":"arginine transamidinase activity","type":"related"},{"name":"canavanase activity","type":"related"}],"termid":"GO:0004053","terms_by_termid":{"GO:0004053":null}}


id: PR:O60185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylthioribose-1-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03887","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.10c","secondary_identifiers":["UniProtKB:O60185"],"synonyms":[{"name":"M1Pi (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTR-1-P isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-methyl-5-thioribose-1-phosphate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRI1","type":"exact"},{"name":"translation initiation factor eIF-2B subunit alpha/beta/delta-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60185"}


id: GO:0102525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-argininium(1+) + 2-oxoglutarate + O2 = (3S)-3-hydroxy-L-arginine(1+) + succinate + carbon dioxide.","definition_xrefs":["GOC:pz","RHEA:36607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-oxoglutarate, L-arginine oxygenase (succinate-forming) activity","secondary_identifiers":["EC:1.14.11.41","MetaCyc:RXN-14542"],"termid":"GO:0102525"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: PBO:0017684
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FUS3","termid":"PBO:0017684"}


id: GO:0023061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a signal is secreted or discharged into the extracellular medium from a cellular source.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"signal release","synonyms":[{"name":"signal secretion","type":"exact"}],"termid":"GO:0023061"}


id: GO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in the germ line of a hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite germ-line sex determination","secondary_identifiers":["GO:0042005"],"termid":"GO:0040021"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: PBO:0063007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 1","termid":"PBO:0063007"}


id: FYPO:0004455
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01050"],"single_locus_genotype_uniquenames":["nur1delta"],"synonyms":[{"name":"decreased protein localisation to nucleus","type":"exact"},{"name":"reduced protein localization to nucleus","type":"exact"}],"termid":"FYPO:0004455","terms_by_termid":{"FYECO:0000137":null,"FYPO:0007073":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: SO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exonic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"is_a","term_name":"exon_region","termid":"SO:0000852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splicing_silencer","synonyms":[{"name":"ESS","type":"exact"},{"name":"exonic splicing silencer","type":"exact"}],"termid":"SO:0002058"}


id: GO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.","definition_xrefs":["UM-BBD_enzymeID:e0422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018574"}


id: GO:0038168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epidermal growth factor receptor signaling pathway in which the signal transmitted via I-kappaB-kinase (IKK)-dependent activation of the transcription factor NF-kappaB.","definition_xrefs":["PMID:22132240","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor signaling pathway via I-kappaB kinase/NF-kappaB cascade (obsolete GO:0038168)","synonyms":[{"name":"EGFR signaling pathway via IKK-dependent activation of NF-kappaB","type":"exact"},{"name":"EGFR signaling pathway via IKK/NF-kappaB cascade","type":"exact"}],"termid":"GO:0038168"}


id: PBO:0041880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 2","termid":"PBO:0041880"}


id: PBO:0005497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major transcript in 972 h- is non functional as it contains a stop codon","termid":"PBO:0005497"}


id: PBO:0067116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 160, pseudogene","termid":"PBO:0067116"}


id: GO:0009324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses D-amino-acid dehydrogenase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase complex","termid":"GO:0009324"}


id: GO:0099110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached.","definition_xrefs":["PMID:11018050","GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization based protein transport","termid":"GO:0099112"},{"relation_name":"is_a","term_name":"protein localization to cell cortex of cell tip","termid":"GO:1990896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"microtubule polymerization based protein transport to cell tip cortex","termid":"GO:0099110"}


id: PBO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 4","termid":"PBO:0075279"}


id: PBO:0062495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 12","termid":"PBO:0062495"}


id: PATO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001209 absolute function (obsolete PATO:0001209)","termid":"PATO:0001209"}


id: PBO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 7","termid":"PBO:0072037"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_00797","SJAG_00368","SJAG_01114","SJAG_02392","SJAG_02196","SJAG_00852","SJAG_03081","SJAG_03464","SJAG_03596","SJAG_05272","SJAG_00077","SJAG_05207","SJAG_00254","SJAG_02173","SJAG_03345","SJAG_04363","SJAG_04875","SJAG_02435","SJAG_01835","SJAG_02233","SJAG_02260","SJAG_01774","SJAG_01290","SJAG_00310","SJAG_04018","SJAG_02989","SJAG_02605","SJAG_02916","SJAG_00784","SJAG_00415","SJAG_01029","SJAG_04851","SJAG_01307","SJAG_01086","SJAG_01738","SJAG_02093","SJAG_04238","SJAG_00340","SJAG_04209","SJAG_04483","SJAG_01242","SJAG_04266","SJAG_04666","SJAG_00605","SJAG_03204","SJAG_00218","SJAG_04850","SJAG_04732","SJAG_00948","SJAG_00096","SJAG_04026","SJAG_02444","SJAG_04077","SJAG_04509","SJAG_03640","SJAG_00109","SJAG_04789","SJAG_01806","SJAG_01249","SJAG_04685","SJAG_01134","SJAG_02587","SJAG_05268"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83852,104693],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[90685,105226,101272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[84996,97996,99940,102021,96040,94807,100274,111026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[94529,88060,106216,88223,97913,83670,85449,99208,102464,75445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[91441,102023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[113524,90459,109055,108359,109775,89686,110858,99484,85839,90460,113945,97745,101992,111536,90461,90447,109674,97739,90878,87249,110045,112563,103197,97746,112993,85645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[105901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[95975,99245],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[89846,104408,101924,109145,102556],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[95309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[85679,89451,91836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00605":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_00948":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03204":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04266":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: PR:P17476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp101 gene.","definition_xrefs":["UniProtKB:P17476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P1-alpha 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.15","synonyms":[{"name":"A1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp101","type":"exact"}],"termid":"PR:P17476"}


id: GO:0006610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane. At least some ribosomal proteins, including rpl12, uses the importin 11 pathway as a major route into the nucleus.","definition_xrefs":["GOC:ai","PMID:11809816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913","GO:0051179"],"is_obsolete":false,"name":"ribosomal protein import into nucleus","synonyms":[{"name":"ribosomal protein import into cell nucleus","type":"exact"},{"name":"ribosomal protein transport from cytoplasm to nucleus","type":"exact"},{"name":"ribosomal protein-nucleus import","type":"exact"}],"termid":"GO:0006610"}


id: PBO:0042883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 276","termid":"PBO:0042883"}


id: PBO:0059521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L","termid":"PBO:0059521"}


id: GO:0098682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that anchors a synaptic ribbon to the presynaptic membrane.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"arciform density","termid":"GO:0098682"}


id: PBO:0086422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase with a role in biogenesis of RNA pol II and polIII; may be involved in assembly of RNA polymerases II and III and in their transport into the nucleus; may have a role in sister chromatid cohesion; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; contains a Gly-Pro-Asn motif in the G domain; similar to Npa3p and Gpn2p","termid":"PBO:0086422"}


id: FYPO:0003545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of mitotic cell cycle arrest or delay due to regulation by the DNA replication checkpoint is greater than normal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle DNA replication checkpoint","synonyms":[{"name":"increased duration of DNA replication checkpoint","type":"broad"},{"name":"increased duration of mitotic cell cycle DNA replication checkpoint activation","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint activated","type":"related"},{"name":"prolonged mitotic cell cycle DNA replication checkpoint","type":"exact"}],"termid":"FYPO:0003545"}


id: GO:0140056
data:
  {"annotated_genes":["SJAG_00280","SJAG_04417","SJAG_01305","SJAG_00380","SJAG_00171","SJAG_03247","SJAG_03170","SJAG_03536","SJAG_02320","SJAG_03499","SJAG_01168","SJAG_02699","SJAG_04023","SJAG_04978","SJAG_01437","SJAG_01116","SJAG_00053","SJAG_03347","SJAG_04221","SJAG_03416","SJAG_04966","SJAG_03710","SJAG_04370","SJAG_01564","SJAG_04413","SJAG_01929","SJAG_01598","SJAG_01772","SJAG_00029","SJAG_01324","SJAG_01697","SJAG_03848","SJAG_02587","SJAG_00430","SJAG_02626","SJAG_01633","SJAG_03552","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[93030,113352,113858,114116,87154,97294,107007,86124,71683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[70481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[102946,78522,70118,111870,103077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[78842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[102454,110483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[89944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[71755,95049,105191,76709,105042,96646,85444,108009,112773,104089,95836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[95777,87984,114010,86288,69943,113406,71370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane docking","termid":"GO:0022406"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"organelle localization by membrane tethering","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140056","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: GO:0006666
data:
  {"annotated_genes":["SJAG_02488"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72611],"is_not":false,"summary":null,"term":"GO:0006666"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-keto-sphinganine, a derivative of sphinganine with a ketone group at C3. It is an intermediate in the synthesis of sphingosine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-keto-sphinganine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"3-keto-dihydrosphingosine metabolic process","type":"exact"},{"name":"3-keto-dihydrosphingosine metabolism","type":"exact"},{"name":"3-keto-sphinganine metabolism","type":"exact"}],"termid":"GO:0006666","terms_by_termid":{"GO:0006666":null}}


id: GO:0046952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"cellular ketone body metabolic process","termid":"GO:0046950"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006091","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"ketone body catabolic process","secondary_identifiers":["Reactome:R-HSA-77108","MetaCyc:PWY66-368"],"synonyms":[{"name":"ketolysis","type":"exact"},{"name":"ketone body breakdown","type":"exact"},{"name":"ketone body catabolism","type":"exact"},{"name":"ketone body degradation","type":"exact"},{"name":"utilization of ketone bodies","type":"exact"}],"termid":"GO:0046952"}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["RHEA:24340","MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: GO:0031657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that controls the frequency, rate or extent of G1 cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031657)","synonyms":[{"name":"G1/S-specific regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031657"}


id: PATO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty","termid":"PATO:0002114"}


id: GO:0007360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes encoding transcription factors in the posterior region of an insect embryo by a combination of maternal regulatory signals and interactions among themselves; exemplified by the activation of expression of the Drosophila knirps gene.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of posterior gap gene transcription (obsolete GO:0007360)","synonyms":[{"name":"activation of posterior gap gene","type":"broad"},{"name":"activation of posterior gap gene transcription","type":"narrow"},{"name":"knirps activation","type":"narrow"},{"name":"stimulation of posterior gap gene transcription","type":"narrow"},{"name":"up regulation of posterior gap gene transcription","type":"exact"},{"name":"up-regulation of posterior gap gene transcription","type":"exact"},{"name":"upregulation of posterior gap gene transcription","type":"exact"}],"termid":"GO:0007360"}


id: GO:0071307
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin K stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin K","termid":"GO:0032571"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin K","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071307","terms_by_termid":{"GO:0036245":null}}


id: GO:1990792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glial cell derived neurotrophic factor stimulus.","definition_xrefs":["PMID:20877310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to glial cell derived neurotrophic factor","termid":"GO:1990790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glial cell derived neurotrophic factor","synonyms":[{"name":"cellular response to ATF","type":"exact"},{"name":"cellular response to GDNF","type":"exact"},{"name":"cellular response to astrocyte-derived trophic factor","type":"exact"}],"termid":"GO:1990792"}


id: FYPO:0003135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type normally (i.e. agglutination is indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal agglutination","synonyms":[{"name":"normal agglutination involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0003135"}


id: PBO:0110498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAT1 regulated ILF2 complex interacting lncRNA","termid":"PBO:0110498"}


id: FYPO:0002536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","termid":"FYPO:0002533"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002536"}


id: PBO:0072388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 14","termid":"PBO:0072388"}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: GO:1990970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a trans-activation response (TAR) element, a hairpin RNA structure located at the 5' end of all HIV-1 transcripts, and which is required for trans-activation of a viral promoter.","definition_xrefs":["PMID:25116364","GOC:PARL","Wikipedia:Trans-activation_response_element_(TAR)","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA binding","termid":"GO:0070883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"trans-activation response element binding","synonyms":[{"name":"TAR binding","type":"exact"}],"termid":"GO:1990970"}


id: PBO:0052546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor A1, pseudogene","termid":"PBO:0052546"}


id: GO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring during the process of replicative cell aging as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species involved in replicative cell aging (obsolete GO:0001316)","synonyms":[{"name":"age-dependent response to AOS during replicative cell aging","type":"exact"},{"name":"age-dependent response to ROI during replicative cell aging","type":"related"},{"name":"age-dependent response to ROS during replicative cell aging","type":"related"},{"name":"age-dependent response to active oxygen species during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxidative species during replicative cell aging","type":"exact"},{"name":"age-dependent response to reactive oxygen intermediate during replicative cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen species during replicative cell ageing","type":"exact"},{"name":"age-dependent response to reactive oxygen species during replicative cell aging","type":"related"}],"termid":"GO:0001316"}


id: PBO:0064090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein membrane associated 2","termid":"PBO:0064090"}


id: MOD:00482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-formyl-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:3042771","PubMed:2165784","PubMed:11152118","RESID:AA0021#MET"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-methionine (Met)","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"NFoMet","type":"exact"}],"termid":"MOD:00482"}


id: GO:1900077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"negatively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to insulin stimulus","synonyms":[{"name":"down regulation of cellular response to insulin stimulus","type":"exact"},{"name":"down-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"downregulation of cellular response to insulin stimulus","type":"exact"},{"name":"inhibition of cellular response to insulin stimulus","type":"narrow"}],"termid":"GO:1900077"}


id: GO:1903494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:3585228","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dehydroepiandrosterone","termid":"GO:1903494"}


id: PBO:0059455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 5","termid":"PBO:0059455"}


id: GO:0042725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine (vitamin B1), and compounds derived from it.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"thiamine-containing compound metabolic process","termid":"GO:0042723"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"thiamine-containing compound catabolic process","synonyms":[{"name":"thiamin and derivative catabolic process","type":"exact"},{"name":"thiamin and derivative catabolism","type":"exact"},{"name":"thiamin-containing compound catabolic process","type":"exact"},{"name":"thiamine and derivative catabolic process","type":"exact"},{"name":"thiamine and derivative catabolism","type":"exact"},{"name":"thiamine-containing compound breakdown","type":"exact"},{"name":"thiamine-containing compound catabolism","type":"exact"},{"name":"thiamine-containing compound degradation","type":"exact"},{"name":"vitamin B1 and derivative catabolic process","type":"exact"},{"name":"vitamin B1 and derivative catabolism","type":"exact"}],"termid":"GO:0042725"}


id: PBO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRRAP family protein","termid":"PBO:0000246"}


id: PBO:0080336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 100 pseudogene","termid":"PBO:0080336"}


id: PBO:0030951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_mitochondrion_distribution","termid":"PBO:0030951"}


id: PBO:0040739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 5","termid":"PBO:0040739"}


id: GO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of progesterone, a steroid hormone, by the corpus luteum of the ovary and by the placenta.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"},{"relation_name":"part_of","term_name":"luteinization","termid":"GO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"progesterone secretion","termid":"GO:0042701"}


id: GO:1904930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of an amphisome.","definition_xrefs":["GOC:TermGenie","PMID:17984323","GO_REF:0000064","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome membrane","termid":"GO:0000421"},{"relation_name":"part_of","term_name":"amphisome","termid":"GO:0044753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amphisome membrane","termid":"GO:1904930"}


id: GO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the re-face of oxaloacetate; acetyl-CoA provides the two carbon atoms of the pro-R carboxymethyl group.","definition_xrefs":["PMID:17400742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate synthase activity","termid":"GO:0036440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"citrate (Re)-synthase activity","secondary_identifiers":["EC:2.3.3.3","MetaCyc:CITSYN-RXN"],"synonyms":[{"name":"(R)-citrate synthase activity","type":"related"},{"name":"Re-citrate-synthase activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [thioester-hydrolysing, (pro-R)-carboxymethyl-forming]","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3R)-CH(2)COO(-)->acetyl-CoA) activity","type":"related"},{"name":"citrate oxaloacetate-lyase [(pro-3R)-CH2COO-rightacetyl-CoA]","type":"related"}],"termid":"GO:0050450"}


id: GO:1900044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K63-linked ubiquitination","synonyms":[{"name":"regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900044"}


id: GO:0019782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier ISG15, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016874"],"is_obsolete":false,"name":"ISG15 activating enzyme activity","synonyms":[{"name":"UBE1L","type":"narrow"}],"termid":"GO:0019782"}


id: PBO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia","termid":"PBO:0001866"}


id: GO:0060021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the roof of the mouth from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The roof of the mouth is the partition that separates the nasal and oral cavities.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"roof of mouth development","synonyms":[{"name":"palatum development","type":"exact"}],"termid":"GO:0060021"}


id: PBO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 12","termid":"PBO:0043254"}


id: GO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring viral DNA after damage or errors in replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"part_of","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"viral DNA repair","termid":"GO:0046787"}


id: GO:0099006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into a host cell, following endocytosis, via permeabilization of the endosomal membrane by membrane penetration protein(s) of the symbiont. This process mediates the entry of some non-enveloped virus into eukaryotic cells. In some cases, viral membrane-penetration protein requires to be activated to display its membrane penetrating activity. Activation can be due to receptor binding or the acidic pH of the endosomal lumen.","definition_xrefs":["PMID:15329727","PMID:25055856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of endosomal membrane","synonyms":[{"name":"viral entry via permeabilization of endosomal membrane","type":"narrow"}],"termid":"GO:0099006"}


id: PBO:0070285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 26","termid":"PBO:0070285"}


id: PBO:0064620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 2","termid":"PBO:0064620"}


id: SO:0001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1,2'-O-dimethylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethylinosine","secondary_identifiers":["RNAMOD:019"],"synonyms":[{"name":"1,2'-O-dimethylinosine","type":"exact"},{"name":"m'Im","type":"exact"},{"name":"one two prime O dimethylinosine","type":"exact"}],"termid":"SO:0001279"}


id: FYPO:0004995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis I","termid":"FYPO:0003563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of meiosis I","synonyms":[{"name":"normal meiosis I progression","type":"related"},{"name":"normal onset of first meiotic nuclear division","type":"exact"},{"name":"normal timing of meiosis I","type":"related"}],"termid":"FYPO:0004995"}


id: PBO:0091410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1 Rpp101","termid":"PBO:0091410"}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: GO:0047635
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + a 2-oxo acid = pyruvate + an L-amino acid.","definition_xrefs":["EC:2.6.1.12","MetaCyc:ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alanine-oxo-acid transaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:19953"],"synonyms":[{"name":"L-alanine-alpha-keto acid aminotransferase activity","type":"related"},{"name":"L-alanine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"alanine--oxo-acid aminotransferase activity","type":"related"},{"name":"alanine-keto acid aminotransferase activity","type":"related"},{"name":"alanine-oxo acid aminotransferase activity","type":"related"},{"name":"alanine-oxo-acid aminotransferase activity","type":"exact"},{"name":"leucine-alanine transaminase activity","type":"related"}],"termid":"GO:0047635","terms_by_termid":{"GO:0004021":null}}


id: GO:1902066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall pectin metabolic process.","definition_xrefs":["PMID:23453954","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall pectin metabolic process","synonyms":[{"name":"regulation of cell wall pectin metabolism","type":"exact"},{"name":"regulation of cellulose and pectin-containing cell wall pectin metabolic process","type":"exact"},{"name":"regulation of pectin metabolism during cell wall biogenesis","type":"exact"},{"name":"regulation of plant-type cell wall pectin metabolic process","type":"exact"}],"termid":"GO:1902066"}


id: PBO:0072770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein Z","termid":"PBO:0072770"}


id: PBO:0039335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha kinase 2","termid":"PBO:0039335"}


id: GO:0032479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon production","synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479"}


id: GO:0097570
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized envelope lying outside the cell membrane of a cyst. A cyst is a resting or dormant stage of a microorganism, usually a bacterium or a protist or rarely an invertebrate animal, that helps the organism to survive in unfavorable environmental conditions. In protists such as protozoan parasites alternating cystic- and non-cystic stages, the cyst wall is usually composed of carbohydrates and proteins.","definition_xrefs":["GOC:giardia","PMID:15134259","PMID:2026212","Wikipedia:Microbial_cyst"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"cyst wall","termid":"GO:0097570"}


id: GO:0036362
data:
  {"annotated_genes":["SJAG_04236","SJAG_02626"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113005,113346],"is_not":false,"summary":null,"term":"GO:0036362"}]},"cv_name":"cellular_component","definition":"A double layer of lipid molecules that surrounds an ascus, a capsule containing the sexual spores in some fungi.","definition_xrefs":["GOC:mcc","GOC:vw","PMID:21900489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02626":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036362","terms_by_termid":{"GO:0036362":null}}


id: GO:0140317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a substance across the outer membrane in cells with two membranes.","definition_xrefs":["PMID:15968039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"export across cell outer membrane","termid":"GO:0140317"}


id: PBO:0054264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1649","termid":"PBO:0054264"}


id: PBO:0049145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 2","termid":"PBO:0049145"}


id: PBO:0091809
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. octosporus rsv1","termid":"PBO:0091809"}


id: PBO:0071265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 10","termid":"PBO:0071265"}


id: GO:0106202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amno acids and peptides linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amino acids and peptides linked to a decarboxylation reaction (obsolete GO:0106202)","secondary_identifiers":["EC:7.4.4.-"],"termid":"GO:0106202"}


id: PBO:0055687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyl(octanoyl) transferase 2","termid":"PBO:0055687"}


id: GO:0008944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of oligopeptides, with broad specificity. Gly or Ala commonly occur as P1 or P1' residues, but more distant residues are also important, as is shown by the fact that Z-Gly-Pro-Gly-Gly-Pro-Ala is cleaved at the Gly-Gly bond, but not Z-(Gly)5.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oligopeptidase A activity (obsolete GO:0008944)","synonyms":[{"name":"68000-M signalpeptide hydrolase activity","type":"related"},{"name":"oligopeptidase A activity","type":"exact"}],"termid":"GO:0008944"}


id: PBO:0049857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0049857"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: PR:P24782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp2 gene.","definition_xrefs":["UniProtKB:P24782","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.16c","synonyms":[{"name":"Spom972h-dbp2","type":"exact"},{"name":"p68-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P24782"}


id: PBO:0042260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4 pseudogene 2","termid":"PBO:0042260"}


id: PBO:0082479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization","termid":"PBO:0082479"}


id: GO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a component of the complement pathway binding to a complement receptor. Such components include both whole complement proteins and fragments of complement proteins generated through the activity of the complement pathway.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"complement receptor mediated signaling pathway","synonyms":[{"name":"complement receptor mediated signalling pathway","type":"exact"},{"name":"immune response-regulating cell surface receptor signalling pathway","type":"broad"}],"termid":"GO:0002430"}


id: PBO:0025513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, INCENP ortholog Pic1","termid":"PBO:0025513"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: PBO:0072316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 2","termid":"PBO:0072316"}


id: PBO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biological_process","termid":"PBO:0034492"}


id: GO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + ribofuranose = D-ribonate + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.115","RHEA:11676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ribose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RIBOSE-1-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01079"],"synonyms":[{"name":"D-ribose dehydrogenase (NADP+)","type":"related"},{"name":"D-ribose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-pentose-dehydrogenase activity","type":"related"}],"termid":"GO:0050259"}


id: PBO:0078333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-5","termid":"PBO:0078333"}


id: PBO:0053363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 272","termid":"PBO:0053363"}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: FYPO:0000487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased meiotic recombination","synonyms":[{"name":"meiotic recombination: increased","type":"related"}],"termid":"FYPO:0000487"}


id: GO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O4' atom of peptidyl-tyrosine, O4'-glycosyl-L-tyrosine; the carbohydrate is glucose, the origin for glycogen.","definition_xrefs":["RESID:AA0157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via tyrosine","synonyms":[{"name":"protein amino acid O-linked glycosylation via tyrosine","type":"exact"}],"termid":"GO:0018245"}


id: PBO:0110102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1, possible chaperone for mitochondrial zinc containing proteins","termid":"PBO:0110102"}


id: GO:0000963
data:
  {"annotated_genes":["SJAG_04367","SJAG_03104","SJAG_04885","SJAG_00865","SJAG_00428","SJAG_04700","SJAG_04113","SJAG_00358","SJAG_02526","SJAG_02288","SJAG_02991","SJAG_01704","SJAG_00077","SJAG_06586","SJAG_02302","SJAG_00797","SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99089],"is_not":false,"summary":null,"term":"GO:0000963"},{"annotations":[105970,85681,91838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[105277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[70751,109731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[77920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[113135,105278,83529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[76994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[74895,113798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[89887,112201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[88444,75229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The conversion of a primary RNA molecule transcribed from a mitochondrial genome into one or more mature RNA molecules; occurs in the mitochondrion.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02526":null,"SJAG_02991":null,"SJAG_03104":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"mitochondrial RNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000963","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: PR:O13969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24C9.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.09","synonyms":[{"name":"Spom972h-SPAC24C9.09","type":"exact"},{"name":"ThrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"threonyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13969"}


id: PBO:0066855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 155","termid":"PBO:0066855"}


id: PBO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2 (predicted)","termid":"PBO:0036511"}


id: GO:0042629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase.","definition_xrefs":["PMID:12360215","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"mast cell granule","termid":"GO:0042629"}


id: GO:0035290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk segmentation","termid":"GO:0035290"}


id: GO:0032208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"},{"relation_name":"is_a","term_name":"negative regulation of mitotic recombination","termid":"GO:0045950"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination at telomere","termid":"GO:0048239"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via recombination","synonyms":[{"name":"down regulation of telomere maintenance via recombination","type":"exact"},{"name":"down-regulation of telomere maintenance via recombination","type":"exact"},{"name":"downregulation of telomere maintenance via recombination","type":"exact"},{"name":"inhibition of telomere maintenance via recombination","type":"narrow"}],"termid":"GO:0032208"}


