# terms

id: PBO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates isa1","termid":"PBO:0001371"}


id: SO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that has been implicated in binding although the exact coordinates of binding may be unknown.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimentally_defined_binding_region","synonyms":[{"name":"experimentally defined binding region","type":"related"}],"termid":"SO:0001696"}


id: GO:0052767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the alpha-(1->6) bonds of alpha-D-mannose residues in mannosyl-oligosaccharide.","definition_xrefs":["PMID:2338081","GOC:mengo_curators","PMID:1849817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,6-alpha-mannosidase activity","synonyms":[{"name":"1,6-alpha-mannosidase activity","type":"broad"},{"name":"1,6-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"exact"},{"name":"alpha-1,6-mannosidase activity","type":"broad"},{"name":"alpha-1,6-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"exact"}],"termid":"GO:0052767"}


id: GO:0008938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinate = N-methylnicotinate + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.7","RHEA:20241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"nicotinate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01721","MetaCyc:NICOTINATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:nicotinate N-methyltransferase activity","type":"related"},{"name":"furanocoumarin 8-O-methyltransferase activity","type":"related"}],"termid":"GO:0008938"}


id: GO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation","termid":"GO:0050678"}


id: PBO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 1","termid":"PBO:0070295"}


id: PBO:0082266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF2 has a paralog, DNF1, that arose from the whole genome duplication","termid":"PBO:0082266"}


id: PBO:0078812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMF1 regulated nuclear protein 1","termid":"PBO:0078812"}


id: PBO:0078322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 4","termid":"PBO:0078322"}


id: PBO:0050431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 2","termid":"PBO:0050431"}


id: GO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds, acting as an aminopeptidase (notably, cleaving Arg-Xaa bonds) as well as an endopeptidase.","definition_xrefs":["EC:3.4.22.16"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin H activity (obsolete GO:0004215)","synonyms":[{"name":"N-benzoylarginine-beta-naphthylamide hydrolase activity","type":"related"},{"name":"aleurain activity","type":"related"},{"name":"benzoylarginine-naphthylamide (BANA) hydrolase activity","type":"related"},{"name":"cathepsin B3 activity","type":"related"},{"name":"cathepsin BA activity","type":"related"},{"name":"cathepsin Ba","type":"related"},{"name":"cathepsin H activity","type":"exact"}],"termid":"GO:0004215"}


id: GO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial humoral response","termid":"GO:0008348"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide production","synonyms":[{"name":"down regulation of antimicrobial peptide production","type":"exact"},{"name":"down-regulation of antimicrobial peptide production","type":"exact"},{"name":"downregulation of antimicrobial peptide production","type":"exact"},{"name":"inhibition of antimicrobial peptide production","type":"narrow"}],"termid":"GO:0002785"}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: PBO:0004188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex B box binding subunit Sfc3","termid":"PBO:0004188"}


id: GO:0002613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"}


id: GO:0014733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle adaptation","synonyms":[{"name":"regulation of skeletal muscle plasticity","type":"related"}],"termid":"GO:0014733"}


id: PBO:0074694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70D","termid":"PBO:0074694"}


id: PBO:0012848
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.12","termid":"PBO:0012848"}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Wikipedia:Neurotransmission"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0045321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 1","termid":"PBO:0045321"}


id: GO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-aspartic acid ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a aspartyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"},{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0042158"],"is_obsolete":false,"name":"GPI anchor biosynthetic process via N-aspartyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPI anchor anabolism via N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor formation via N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"},{"name":"GPI anchor synthesis via N-aspartyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"GO:0018266"}


id: GO:0033886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2- and 3-sulfate groups of the polysulfates of cellulose and charonin.","definition_xrefs":["EC:3.1.6.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cellulose-polysulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.7-RXN"],"synonyms":[{"name":"cellulose-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0033886"}


id: GO:0015470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Polypeptide antibiotic secreted by bacteria and able to kill bacteria of susceptible strains after absorption by specific cell surface receptor.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriocin activity (obsolete GO:0015470)","synonyms":[{"name":"bacteriocin activity","type":"exact"}],"termid":"GO:0015470"}


id: PBO:0052923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-6","termid":"PBO:0052923"}


id: GO:1990356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of a SUMO (small ubiquitin-related modifier) protein bound to a SUMO-conjugating E2 ligase. Sumoylation of the E2 ligase is an intermediate step required for the formation of covalent bonds between a SUMO protein and its ultimate protein target. SUMO is transferred to the E2 ligase by a SUMO-activating E1 enzyme. Sumoylation of the target protein is either facilitated directly by the sumoylated E2 ligase or aided by an optional E3 ligase.","definition_xrefs":["GOC:bhm","PMID:18691969"],"gene_count":0,"genotype_count":0,"name":"obsolete sumoylated E2 ligase complex (obsolete GO:1990356)","termid":"GO:1990356"}


id: PBO:0087702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear retention of unspliced pre-mRNAs; acts in the same pathway as Pml39p and Mlp1p","termid":"PBO:0087702"}


id: GO:0033747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: Reactive Black 5 + hydrogen peroxide = oxidized Reactive Black 5 + 2 H2O, and donor + hydrogen peroxide = oxidized donor + 2 H2O.","definition_xrefs":["EC:1.11.1.16"],"gene_count":0,"genotype_count":0,"name":"obsolete versatile peroxidase activity (obsolete GO:0033747)","synonyms":[{"name":"VP","type":"related"},{"name":"hybrid peroxidase activity","type":"related"},{"name":"polyvalent peroxidase activity","type":"related"},{"name":"reactive-black-5:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"versatile peroxidase activity","type":"exact"}],"termid":"GO:0033747"}


id: GO:2001286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of caveolin-mediated endocytosis","synonyms":[{"name":"regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001286"}


id: PBO:0080742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA binding protein 2","termid":"PBO:0080742"}


id: FYPO:0001001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition, instead of the normal G1 phase, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","termid":"FYPO:0000710"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen depletion","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during nitrogen deprivation","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during nitrogen starvation","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during nitrogen starvation","type":"related"},{"name":"advanced nitrogen deprivation-induced G1 arrest","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during nitrogen starvation","type":"exact"},{"name":"mitotic G2/M phase transition arrest during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001001"}


id: PBO:0090111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI-coated vesicle associated protein","termid":"PBO:0090111"}


id: GO:0140340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to a cerebroside and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid transfer activity","termid":"GO:0017089"},{"relation_name":"is_a","term_name":"ceramide transfer activity","termid":"GO:0120017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cerebroside transfer activity","synonyms":[{"name":"cerebroside carrier activity","type":"exact"}],"termid":"GO:0140340"}


id: PBO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor alpha","termid":"PBO:0072718"}


id: PBO:0087889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor of nitric oxide oxidase; basic leucine zipper (bZIP) transcription factor; neighboring gene, YOL029C, created by frame-shift at position 708, corresponds to C-terminal part of YAP7 orthologs in other species; YAP7 has a paralog, YAP5, that arose from the whole genome duplication","termid":"PBO:0087889"}


id: GO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + L-glutamate; and H2O + L-asparagine = NH3 + L-aspartate.","definition_xrefs":["MetaCyc:GLUTAMINASE-ASPARAGIN-ASE-RXN","EC:3.5.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glutamin-(asparagin-)ase activity","secondary_identifiers":["MetaCyc:GLUTAMIN-RXN","MetaCyc:ASPARAGHYD-RXN"],"synonyms":[{"name":"L-ASNase/L-GLNase activity","type":"related"},{"name":"L-asparagine/L-glutamine amidohydrolase activity","type":"related"},{"name":"L-glutamine(L-asparagine) amidohydrolase activity","type":"related"},{"name":"glutaminase-(asparagin-)ase activity","type":"exact"},{"name":"glutaminase-asparaginase activity","type":"related"}],"termid":"GO:0050417"}


id: PBO:0058982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed lineage kinase domain like pseudokinase","termid":"PBO:0058982"}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: GO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,5-trichlorophenoxyacetic acid metabolic process","termid":"GO:0018980"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid catabolic process","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046228"}


id: PBO:0088684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx4","termid":"PBO:0088684"}


id: GO:0097239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a methylglyoxal stimulus.","definition_xrefs":["PMID:15773992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal (obsolete GO:0097239)","termid":"GO:0097239"}


id: GO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a Purkinje myocyte to a ventricular cardiac muscle cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"gap junction channel activity involved in Purkinje myocyte-ventricular cardiac muscle cell electrical coupling","termid":"GO:0086079"}


id: PBO:0072949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor family member expressed on T cells 1","termid":"PBO:0072949"}


id: FYPO:0008064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after phosphate removal.","definition_xrefs":["PMID:36779416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mating efficiency during phosphate starvation","termid":"FYPO:0008064"}


id: PR:O42889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8E4.05c gene.","definition_xrefs":["UniProtKB:O42889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.05c","synonyms":[{"name":"Spom972h-SPBC8E4.05c","type":"exact"}],"termid":"PR:O42889"}


id: GO:1902388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a ceramide 1-phosphate from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:TermGenie","PMID:23863933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"},{"relation_name":"is_a","term_name":"ceramide transfer activity","termid":"GO:0120017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"ceramide 1-phosphate transfer activity","secondary_identifiers":["Reactome:R-HSA-5339535"],"synonyms":[{"name":"ceramide 1-phosphate carrier activity","type":"exact"},{"name":"ceramide 1-phosphate transporter activity","type":"broad"},{"name":"intermembrane ceramide 1-phosphate transfer activity","type":"narrow"}],"termid":"GO:1902388"}


id: GO:0006368
data:
  {"annotated_genes":["SJAG_00914","SJAG_04933","SJAG_03118","SJAG_00320","SJAG_02097","SJAG_02416","SJAG_02238","SJAG_03211","SJAG_04353","SJAG_03128","SJAG_02314","SJAG_01610","SJAG_03967","SJAG_03481","SJAG_02393","SJAG_02209","SJAG_01151","SJAG_00293","SJAG_00540","SJAG_03006","SJAG_00483","SJAG_01713","SJAG_00119","SJAG_00913","SJAG_04257","SJAG_03061","SJAG_02551","SJAG_01149","SJAG_03944","SJAG_04202","SJAG_01707","SJAG_02691","SJAG_00925","SJAG_02319","SJAG_00139","SJAG_02698","SJAG_00150","SJAG_04670","SJAG_04038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87636,88286,89583,90814,94700,95453,100946,101603,102255,103126,103309,106825,108507,109380,109698,111580],"is_not":false,"summary":null,"term":"GO:0006368"},{"annotations":[77711],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001193"},{"annotations":[113144],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034244"},{"annotations":[71519,70929,101482,110571,112238,104431,76973],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032968"},{"annotations":[111481,112148,114015,104180,88032,85789,90232,99044,86920,104184,89023,106616,108924,109844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase II promoter by the addition of ribonucleotides catalyzed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01713":null,"SJAG_02097":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_02551":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_03006":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03944":null,"SJAG_03967":null,"SJAG_04038":null,"SJAG_04202":null,"SJAG_04257":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA elongation from Pol II promoter","type":"exact"},{"name":"RNA polymerase II transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase II promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006368","terms_by_termid":{"GO:0001193":null,"GO:0006368":null,"GO:0032968":null,"GO:0034244":null,"GO:0140673":null}}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:jid","GOC:tb","GOC:dph","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: PBO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Cdk9","termid":"PBO:0001962"}


id: FYPO:0005432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased both at recombination hotspots and elsewhere in the genome.","definition_xrefs":["PomBase:mah","PMID:12019258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"globally decreased mitotic recombination","synonyms":[{"name":"globally decreased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"globally decreased mitotic recombination during vegetative growth","type":"exact"},{"name":"globally reduced mitotic recombination","type":"exact"}],"termid":"FYPO:0005432"}


id: PBO:0054430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1826","termid":"PBO:0054430"}


id: PBO:0003417
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mi2-like protein Interacting with clr Three","termid":"PBO:0003417"}


id: RO:HOM0000061
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Xenology that involves genes that ended up in a given genome as a result of a combination of vertical inheritance and horizontal gene transfer.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_xenology_relationship_with","termid":"RO:HOM0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pseudoparalogy_relationship_with","synonyms":[{"name":"pseudoparalogous to","type":"exact"}],"termid":"RO:HOM0000061"}


id: GO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to absence of light","termid":"GO:0009646"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to absence of light","synonyms":[{"name":"cellular response to darkness","type":"related"}],"termid":"GO:0071485"}


id: FYECO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfide (Na2S) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2S","synonyms":[{"name":"sodium sulfide added","type":"exact"}],"termid":"FYECO:0000165"}


id: PBO:0076370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 7, pseudogene","termid":"PBO:0076370"}


id: FYPO:0002940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on micafungin","synonyms":[{"name":"normal cell population growth in presence of micafungin","type":"exact"},{"name":"normal cell population growth on micafungin","type":"exact"},{"name":"normal cellular response to micafungin","type":"related"},{"name":"normal vegetative cell population growth on micafungin","type":"exact"}],"termid":"FYPO:0002940"}


id: GO:0014038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell differentiation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"Schwann cell differentiation","termid":"GO:0014037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell differentiation","termid":"GO:0014038"}


id: PBO:0052689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 13","termid":"PBO:0052689"}


id: PBO:0067231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 302, pseudogene","termid":"PBO:0067231"}


id: PBO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease, possibly DNA damage related (predicted)","termid":"PBO:0017039"}


id: GO:0048273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to mitogen-activated protein kinase p38, an enzyme that catalyzes the transfer of phosphate from ATP to hydroxyl side chains on proteins in response to mitogen activation.","definition_xrefs":["GOC:curators","PMID:17827184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase binding","termid":"GO:0051019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"mitogen-activated protein kinase p38 binding","synonyms":[{"name":"MAPK p38 binding","type":"exact"}],"termid":"GO:0048273"}


id: GO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:mtg_muscle","PMID:12605307","PMID:11449884","PMID:11181628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber adaptation","synonyms":[{"name":"skeletal muscle fiber plasticity","type":"related"},{"name":"skeletal muscle fibre plasticity","type":"exact"},{"name":"skeletal myofiber plasticity","type":"exact"},{"name":"skeletal myofibre plasticity","type":"exact"}],"termid":"GO:0043503"}


id: PBO:0055172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2596","termid":"PBO:0055172"}


id: FYPO:0008053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and mRNA intron acceptor is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0002131","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased intron acceptor binding","synonyms":[{"name":"'decreased 3' intron binding'","type":"exact"}],"termid":"FYPO:0008053"}


id: PBO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad1","termid":"PBO:0002785"}


id: GO:0055003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myofibril assembly","termid":"GO:0030239"},{"relation_name":"part_of","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"cardiac myofibril assembly","synonyms":[{"name":"cardiac myofibril development","type":"exact"},{"name":"cardiac myofibril morphogenesis","type":"exact"},{"name":"heart myofibril assembly","type":"related"}],"termid":"GO:0055003"}


id: PBO:0027131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_early_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0027131"}


id: PBO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor","termid":"PBO:0002687"}


id: PBO:0058655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6783","termid":"PBO:0058655"}


id: PBO:0065404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 6","termid":"PBO:0065404"}


id: GO:0000140
data:
  {"annotated_genes":["SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71446],"is_not":false,"summary":null,"term":"GO:0000140"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-palmitoylglycerol-3-phosphate + NADP+ = palmitoylglycerone phosphate + NADPH + H+.","definition_xrefs":["EC:1.1.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01036":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acylglycerone-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17341","MetaCyc:ACYLGLYCERONE-PHOSPHATE-REDUCTASE-RXN","Reactome:R-HSA-75883"],"synonyms":[{"name":"1-acyldihydroxyacetone-phosphate reductase activity","type":"exact"},{"name":"1-palmitoylglycerol-3-phosphate:NADP+ oxidoreductase activity","type":"related"},{"name":"acyldihydroxyacetone phosphate reductase activity","type":"related"},{"name":"palmitoyl dihydroxyacetone phosphate reductase activity","type":"related"},{"name":"palmitoyl-dihydroxyacetone-phosphate reductase activity","type":"related"},{"name":"palmitoyldihydroxyacetone-phosphate reductase activity","type":"related"}],"termid":"GO:0000140","terms_by_termid":{"GO:0000140":null}}


id: GO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way, Once recruited to an RNA polymerase III promoter by one or more other transcription factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIIB-type transcription factor activity (obsolete GO:0001026)","synonyms":[{"name":"RNA polymerase III recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001026"}


id: PBO:0047998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fyn related Src family tyrosine kinase","termid":"PBO:0047998"}


id: SO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 10-bp promoter element bound by sterol regulatory element binding proteins (SREBPs), found in promoters of genes involved in sterol metabolism. Many variants of the sequence ATCACCCCAC function as SREs.","definition_xrefs":["PMID:11111080","PMID:16537923","GO:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol_regulatory_element","synonyms":[{"name":"SRE","type":"broad"}],"termid":"SO:0001861"}


id: GO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins following the induction of and contributing to an immune response.","definition_xrefs":["PMID:14991701","GOC:add","PMID:11205333","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic hypermutation of immunoglobulin genes","termid":"GO:0016446"},{"relation_name":"part_of","term_name":"B cell affinity maturation","termid":"GO:0002344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic hypermutation of antibody genes during immune response","type":"related"},{"name":"somatic hypermutation of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002205"}


id: GO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0242"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-serine thiazolecarboxylic acid (obsolete GO:0018138)","termid":"GO:0018138"}


id: GO:0042406
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the endoplasmic reticulum membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:curators","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"extrinsic component of endoplasmic reticulum membrane","synonyms":[{"name":"extrinsic to ER membrane","type":"exact"},{"name":"extrinsic to endoplasmic reticulum membrane","type":"narrow"}],"termid":"GO:0042406"}


id: GO:0043998
data:
  {"annotated_genes":["SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73715],"is_not":false,"summary":null,"term":"GO:0043998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine = CoA + histone H2A N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0140096","GO:0016740","GO:0003824","GO:0034212"],"is_obsolete":false,"name":"histone H2A acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"H2A histone acetylase activity","type":"exact"},{"name":"H2A histone acetyltransferase activity","type":"exact"},{"name":"H2A histone lysine N-acetyltransferase activity","type":"exact"}],"termid":"GO:0043998","terms_by_termid":{"GO:0043998":null}}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: FYPO:0001529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GTP binding","termid":"FYPO:0001528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased GTP binding","synonyms":[{"name":"reduced GTP binding","type":"exact"}],"termid":"FYPO:0001529"}


id: GO:0089708
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92938],"is_not":false,"summary":null,"term":"GO:0089708"}]},"cv_name":"biological_process","definition":"The directed movement of L-histidine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"},{"relation_name":"is_a","term_name":"L-histidine transport","termid":"GO:1902024"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-histidine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089708","terms_by_termid":{"GO:0089708":null}}


id: GO:0031386
data:
  {"annotated_genes":["SJAG_02253","SJAG_03971","SJAG_01365","SJAG_06309","SJAG_02891","SJAG_03616","SJAG_01226","SJAG_00615","SJAG_00452","SJAG_03849","SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70422,70709,72463,74968,75012,78371,78879,85809,86728,86730,104946],"is_not":false,"summary":null,"term":"GO:0031386"}]},"cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to another protein where it acts as a marker, recognized by the cellular apparatus to target the tagged protein for some cellular process such as modification, sequestration, transport or degradation.","definition_xrefs":["PMID:19028679","GOC:dos","PMID:20054389","PMID:6305978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular tag activity","termid":"GO:0141047"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_02253":null,"SJAG_02891":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03849":null,"SJAG_03971":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein tag activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"protein tag","type":"exact"},{"name":"protein tagging activity","type":"related"},{"name":"ubiquitin","type":"related"},{"name":"ubiquitin-like protein modifier","type":"exact"}],"termid":"GO:0031386","terms_by_termid":{"GO:0031386":null}}


id: GO:0061108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle epithelium over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"seminal vesicle development","termid":"GO:0061107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle epithelium development","termid":"GO:0061108"}


id: GO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the pronephros along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in pronephros development","synonyms":[{"name":"anterior/posterior pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0034672"}


id: PBO:0029456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_leucine_import","termid":"PBO:0029456"}


id: PBO:0056726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER proto-oncogene, tyrosine kinase","termid":"PBO:0056726"}


id: GO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycinergic synaptic transmission in the presence of zinc. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, glycinergic","termid":"GO:0060094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"zinc potentiation of synaptic transmission, glycinergic","synonyms":[{"name":"zinc potentiation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060095"}


id: GO:0019203
data:
  {"annotated_genes":["SJAG_00039","SJAG_00182","SJAG_01646","SJAG_05314","SJAG_00129","SJAG_00685","SJAG_01862","SJAG_02713","SJAG_01427","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77493,74355,75301,72699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[78613,78024,75180,73948,73483,77767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbohydrate phosphate + H2O = carbohydrate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00129":null,"SJAG_00182":null,"SJAG_00685":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"carbohydrate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-3781011","Reactome:R-HSA-3781018","Reactome:R-HSA-3791349"],"termid":"GO:0019203","terms_by_termid":{"GO:0004331":null,"GO:0004805":null}}


id: PBO:0088457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body component, Nst1","termid":"PBO:0088457"}


id: GO:0008096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the epoxide in a juvenile hormone to the corresponding diol.","definition_xrefs":["PMID:8396141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"juvenile hormone epoxide hydrolase activity","secondary_identifiers":["EC:3.3.2.-"],"termid":"GO:0008096"}


id: MOD:01097
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-benzyl-L-cysteine.","definition_xrefs":["DeltaMass:242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-benzyl-L-cysteine","termid":"MOD:01097"}


id: PBO:0071189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 30","termid":"PBO:0071189"}


id: PBO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 3","termid":"PBO:0045548"}


id: GO:0150090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a synapse between a multiple synapse bouton and a single dendrite.","definition_xrefs":["PMID:10586883","PMID:11248111","PMID:22028887","PMID:24487234","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple spine synapse organization","termid":"GO:0150089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multiple spine synapse organization, single dendrite","termid":"GO:0150090"}


id: GO:0009318
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield nucleoside 5'-phosphates; it prefers single-stranded DNA.","definition_xrefs":["PMID:6284744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease VII complex","termid":"GO:0009318"}


id: GO:0140682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di- or a monomethyl-lysine residue at position 4 of the histone H3 protein. This is a flavin adenine dinucleotide (FAD)-dependent amine oxidation reaction.","definition_xrefs":["PMID:22473470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"histone H3K4 demethylase activity","termid":"GO:0032453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003824","GO:0003674","GO:0032452"],"is_obsolete":false,"name":"FAD-dependent H3K4me/H3K4me3 demethylase activity","secondary_identifiers":["EC:1.14.99.66","RHEA:60244"],"synonyms":[{"name":"histone H3-di/monomethyl-lysine-4 FAD-dependent demethylase activity","type":"exact"},{"name":"histone H3K4me demethylase activity","type":"related"},{"name":"histone H3K4me2 demethylase activity","type":"broad"}],"termid":"GO:0140682"}


id: GO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["GOC:add","PMID:15207821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002362"}


id: PBO:0043846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 1","termid":"PBO:0043846"}


id: GO:1990361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of pyruvate kinase activity. PKM2 only exists as homotetramer when bound to beta-d-fructofuranose 1,6-bisphosphate (CHEBI:28013).","definition_xrefs":["PMID:24606918","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate kinase complex","termid":"GO:1902912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PKM2 pyruvate kinase complex","synonyms":[{"name":"PKM2 homotetramer","type":"exact"}],"termid":"GO:1990361"}


id: GO:0019969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-10.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-10 binding","synonyms":[{"name":"IL-10 binding","type":"exact"}],"termid":"GO:0019969"}


id: PBO:0067142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 190, pseudogene","termid":"PBO:0067142"}


id: PBO:0069874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1161, pseudogene","termid":"PBO:0069874"}


id: PBO:0041613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdk5 and Abl enzyme substrate 1","termid":"PBO:0041613"}


id: PBO:0076234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 2","termid":"PBO:0076234"}


id: PR:Q9HE04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE04"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.11c","synonyms":[{"name":"Spom972h-rho5","type":"exact"}],"termid":"PR:Q9HE04"}


id: PBO:0046201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3, pseudogene","termid":"PBO:0046201"}


id: GO:0009752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a salicylic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to salicylic acid","termid":"GO:0009751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of salicylic acid stimulus","synonyms":[{"name":"perception of salicylic acid stimulus","type":"related"}],"termid":"GO:0009752"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: PBO:0063200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin-4 alpha-carbinolamine dehydratase 2","termid":"PBO:0063200"}


id: GO:0060452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"},{"relation_name":"positively_regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle contraction","termid":"GO:0060452"}


id: PBO:0075020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-31","termid":"PBO:0075020"}


id: PBO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bounding_layer_of","termid":"PBO:0034218"}


id: PBO:0057627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1202","termid":"PBO:0057627"}


id: PBO:0041635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 1","termid":"PBO:0041635"}


id: SO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small untranslated RNA which is induced in response to oxidative stress in Escherichia coli. Acts as a global regulator to activate or repress the expression of as many as 40 genes, including the fhlA-encoded transcriptional activator and the rpoS-encoded sigma(s) subunit of RNA polymerase. OxyS is bound by the Hfq protein, that increases the OxyS RNA interaction with its target messages.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxyS_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/OxyS_RNA"],"synonyms":[{"name":"OxyS RNA","type":"exact"}],"termid":"SO:0000384"}


id: PBO:0055817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactoperoxidase","termid":"PBO:0055817"}


id: GO:0035964
data:
  {"annotated_genes":["SJAG_04391","SJAG_03268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71508,112960],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of a Golgi membrane, resulting in formation of a COPI-coated vesicle.","definition_xrefs":["PMID:17041781","GOC:br","PMID:10052452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"COPI-coated vesicle budding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"COPI vesicle budding","type":"exact"}],"termid":"GO:0035964","terms_by_termid":{"GO:0048205":null}}


id: GO:1900058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["GOC:TermGenie","PMID:7601277","PMID:7891681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of sulfate assimilation","synonyms":[{"name":"regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"regulation of sulphate assimilation","type":"exact"},{"name":"regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900058"}


id: GO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a killer cell immunoglobulin-like receptor capable of cellular activation.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stimulatory killer cell immunoglobulin-like receptor signaling pathway","synonyms":[{"name":"stimulatory KIR signaling pathway","type":"exact"},{"name":"stimulatory killer cell immunoglobulin-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002222"}


id: PBO:0085658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mRNA export; component of the transcription export (TREX) complex","termid":"PBO:0085658"}


id: PBO:0053941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1242","termid":"PBO:0053941"}


id: GO:0055055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. D-glucose is the dextrorotatory D-enantiomer of glucose.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"},{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-glucose:proton symporter activity","synonyms":[{"name":"D-glucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055055"}


id: MOD:00059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-acetyl-L-proline.","definition_xrefs":["RESID:AA0050","PubMed:2928307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-proline","synonyms":[{"name":"(2S)-1-acetyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-acetylproline","type":"exact"},{"name":"MOD_RES N-acetylproline","type":"exact"},{"name":"N-acetyl-L-proline","type":"exact"},{"name":"N-acetylated L-proline","type":"exact"},{"name":"N-acetylproline","type":"exact"},{"name":"NAcPro","type":"exact"},{"name":"acetylproline","type":"exact"}],"termid":"MOD:00059"}


id: PBO:0003444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ZC3H3 homolog","termid":"PBO:0003444"}


id: FYPO:0003564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is abnormal.","definition_xrefs":["PomBase:mah","GO:0042138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}


id: MOD:00773
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 181.00-181.02 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"}


id: PR:Q9UTL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle-associated MMXD complex subunit MIP18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIP18 family protein C144.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.16","secondary_identifiers":["UniProtKB:Q9UTL0"],"synonyms":[{"name":"Spom972h-FAM96B","type":"exact"}],"termid":"PR:Q9UTL0"}


id: GO:1990747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of trypsinogen from the cells of the exocrine pancreas.","definition_xrefs":["PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pancreatic trypsinogen secretion","synonyms":[{"name":"pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1990747"}


id: PBO:0063302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCED1B antisense RNA 1","termid":"PBO:0063302"}


id: GO:0021803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a long process to the pial surface as a cell leaves the ventricular zone.","definition_xrefs":["GOC:jid","PMID:12626695","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"somal translocation","termid":"GO:0021802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extension of leading cell process to pial surface","termid":"GO:0021803"}


id: GO:0106195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic anions linked to oxidoreductase reactions.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activty acting on inorganic anions linked to oxidoreductase reactions (obsolete GO:0106195)","secondary_identifiers":["EC:7.3.1.-"],"termid":"GO:0106195"}


id: PBO:0084279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the endoplasmic reticulum; required for normal content of cell wall beta-1,6-glucan","termid":"PBO:0084279"}


id: GO:0015062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete violet-sensitive opsin (obsolete GO:0015062)","synonyms":[{"name":"violet-sensitive opsin","type":"exact"}],"termid":"GO:0015062"}


id: GO:0048635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle organ development","synonyms":[{"name":"down regulation of muscle development","type":"exact"},{"name":"down-regulation of muscle development","type":"exact"},{"name":"downregulation of muscle development","type":"exact"},{"name":"inhibition of muscle development","type":"narrow"}],"termid":"GO:0048635"}


id: PBO:0057003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 96","termid":"PBO:0057003"}


id: GO:1905252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GOC:bc","GO_REF:0000060","GOC:BHF","GOC:BHF_miRNA","PMID:23069713","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905252)","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"}],"termid":"GO:1905252"}


id: PBO:0045705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK3 antisense RNA 1","termid":"PBO:0045705"}


id: FYPO:0003397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the 35S rRNA primary transcript measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rRNA precursor level","termid":"FYPO:0003601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased 35S rRNA precursor level","synonyms":[{"name":"decreased 35S rRNA precursor accumulation","type":"related"},{"name":"decreased 35S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"decreased 35S rRNA precursor level during vegetative growth","type":"exact"},{"name":"decreased 35S rRNA precursor transcript level","type":"exact"},{"name":"decreased 35S rRNA primary transcript level","type":"exact"},{"name":"reduced 35S rRNA precursor level","type":"exact"}],"termid":"FYPO:0003397"}


id: GO:0047542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-furoyl-CoA + A + H2O = 5-hydroxy-2-furoyl-CoA + AH(2) + H+.","definition_xrefs":["RHEA:21480","EC:1.3.99.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-furoyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:2-FUROYL-COA-DEHYDROGENASE-RXN","KEGG_REACTION:R02987"],"synonyms":[{"name":"2-furoyl coenzyme A dehydrogenase activity","type":"related"},{"name":"2-furoyl coenzyme A hydroxylase activity","type":"related"},{"name":"2-furoyl-CoA:(acceptor) 5-oxidoreductase (hydroxylating)","type":"related"},{"name":"2-furoyl-CoA:acceptor 5-oxidoreductase (hydroxylating)","type":"related"},{"name":"furoyl-CoA hydroxylase activity","type":"related"}],"termid":"GO:0047542"}


id: GO:0045482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + trichodiene.","definition_xrefs":["EC:4.2.3.6","RHEA:12052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trichodiene synthase activity","secondary_identifiers":["MetaCyc:TRICHODIENE-SYNTHASE-RXN","KEGG_REACTION:R02306"],"synonyms":[{"name":"sesquiterpene cyclase activity","type":"broad"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, trichodiene-forming)","type":"related"},{"name":"trans,trans-farnesyl-diphosphate sesquiterpenoid-lyase activity","type":"related"},{"name":"trichodiene synthetase activity","type":"related"}],"termid":"GO:0045482"}


id: PBO:0044384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7 pseudogene 1","termid":"PBO:0044384"}


id: GO:0070648
data:
  {"annotated_genes":["SJAG_00938","SJAG_04887","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93851,103543,114741],"is_not":false,"summary":null,"term":"GO:0070648"}]},"cv_name":"cellular_component","definition":"An actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins. In fungal cells, myosin motors transport cargo along actin cables toward sites of polarized cell growth; actin cables may play a similar role in pollen tube growth.","definition_xrefs":["PMID:14671023","PMID:16959963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle","termid":"GO:0097518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"formin-nucleated actin cable","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0070648","terms_by_termid":{"GO:0070648":null}}


id: PBO:0048181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 2","termid":"PBO:0048181"}


id: GO:0070098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a chemokine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to chemokine","termid":"GO:1990869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine-mediated signaling pathway","synonyms":[{"name":"chemokine-mediated signalling pathway","type":"exact"}],"termid":"GO:0070098"}


id: PBO:0031440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_cytoplasm_during_vegetative_growth","termid":"PBO:0031440"}


id: GO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-cysteine to form S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-phospho-L-cysteine (obsolete GO:0018325)","termid":"GO:0018325"}


id: GO:0102343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxyicosanoyl-CoA = trans-2-icosenoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.134"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-arachidoyl-CoA dehydratase activity (obsolete GO:0102343)","termid":"GO:0102343"}


id: PBO:0034252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_preceded_by","termid":"PBO:0034252"}


id: PBO:0081179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zymogen granule protein 16","termid":"PBO:0081179"}


id: SO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_J_C_cluster","synonyms":[{"name":"V D DJ J C cluster","type":"exact"},{"name":"V-D-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000529"}


id: PBO:0056959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20b","termid":"PBO:0056959"}


id: PBO:0073144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23A antisense RNA 1","termid":"PBO:0073144"}


id: PBO:0068657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 38, pseudogene","termid":"PBO:0068657"}


id: PBO:0045689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNLL2 divergent transcript","termid":"PBO:0045689"}


id: PBO:0063786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 11","termid":"PBO:0063786"}


id: PBO:0047777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC1 upstream transcript","termid":"PBO:0047777"}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: PBO:0087498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; exhibits histone acetyltransferase activity that is directed to histones H3 and H4; disruption confers resistance to K. lactis zymotoxin; human homolog ELP3 can partially complement yeast elp3 null mutant","termid":"PBO:0087498"}


id: PBO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus induced 3","termid":"PBO:0045743"}


id: GO:0106433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction O6-methyl-dGTP + H2O = O6-methyl-dGMP + diphosphate + H+.","definition_xrefs":["PMID:30304478","RHEA:67600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O6-methyl-dGTP hydrolase activity","termid":"GO:0106433"}


id: PR:O74939
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl2 gene.","definition_xrefs":["UniProtKB:O74939","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.01c","synonyms":[{"name":"Spom972h-dbl2","type":"exact"}],"termid":"PR:O74939"}


id: PBO:0073488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 1 pseudogene 1","termid":"PBO:0073488"}


id: PBO:0041551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 12","termid":"PBO:0041551"}


id: GO:0051219
data:
  {"annotated_genes":["SJAG_03118","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72268,76974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphoprotein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphorylated protein binding","type":"exact"}],"termid":"GO:0051219","terms_by_termid":{"GO:1990269":null}}


id: PBO:0078894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 5-1","termid":"PBO:0078894"}


id: GO:1905687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:PARL","PMID:23091060","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid kinase activity","termid":"GO:0043550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of diacylglycerol kinase activity","synonyms":[{"name":"regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"regulation of DG kinase activity","type":"exact"},{"name":"regulation of DGK activity","type":"exact"},{"name":"regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"regulation of diglyceride kinase activity","type":"exact"},{"name":"regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905687"}


id: GO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into metallo-sulfur cluster","synonyms":[{"name":"iron incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018283"}


id: PBO:0082101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase and SNARE disassembly chaperone; required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, autophagy, and protein secretion; releases Sec17p from SNAP complexes; has similarity to mammalian N-ethylmaleimide-sensitive factor (NSF)","termid":"PBO:0082101"}


id: PBO:0027451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_at_low_temperature","termid":"PBO:0027451"}


id: MOD:00928
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:16771548","Unimod:513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[3-(2,5)-dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","synonyms":[{"name":"C8-QAT","type":"related"},{"name":"[3-(2,5)-Dioxopyrrolidin-1-yloxycarbonyl)-propyl]dimethyloctylammonium","type":"related"}],"termid":"MOD:00928"}


id: PBO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein, Erd1 homolog, required for glycosylation and ER retention Erd1/Gmn2","termid":"PBO:0090647"}


id: PBO:0029097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine_synthase_activity","termid":"PBO:0029097"}


id: FYPO:0006536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to cell periphery during vegetative growth","synonyms":[{"name":"increased protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"increased protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006536"}


id: GO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100016)","termid":"GO:0100016"}


id: PBO:0041649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA2D3 antisense RNA 1","termid":"PBO:0041649"}


id: GO:0000479
data:
  {"annotated_genes":["SJAG_00897","SJAG_04524","SJAG_04224","SJAG_03952","SJAG_00955","SJAG_01551","SJAG_03425","SJAG_02275","SJAG_02250","SJAG_03789","SJAG_02553","SJAG_01623","SJAG_03796","SJAG_00344","SJAG_03234","SJAG_03846","SJAG_01581","SJAG_06613","SJAG_00772","SJAG_01476","SJAG_02374","SJAG_04174","SJAG_04582","SJAG_00965","SJAG_04916","SJAG_02547"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73859,75031,75852],"is_not":false,"summary":null,"term":"GO:0000479"},{"annotations":[71439,90564,87364,99602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000448"},{"annotations":[70379,72629,76888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000480"},{"annotations":[73970,110579,101095,71146,101096,100027,90325,100235,71703,70377,108804,113775,72627,92375,104401,110658,98609,92084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000447"},{"annotations":[73971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000461"},{"annotations":[76887,104402,70378,72628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with three genes, in this order, are produced in the nuclei of many eukaryotic species, including S. cerevisiae.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00344":null,"SJAG_00772":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01476":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000479","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000461":null,"GO:0000472":null,"GO:0000479":null,"GO:0000480":null}}


id: SO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_ribosylguanosine_phosphate is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_ribosylguanosine_phosphate","secondary_identifiers":["RNAMOD:036"],"synonyms":[{"name":"2'-O-ribosylguanosine (phosphate)","type":"exact"},{"name":"Gr(p)","type":"exact"},{"name":"two prime O ribosylguanosine phosphate","type":"exact"}],"termid":"SO:0001331"}


id: PBO:0087235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity; involved in response to heat shock and other stressors; regulates 1,3-beta-glucan synthesis; WSC3 has a paralog, WSC2, that arose from the whole genome duplication","termid":"PBO:0087235"}


id: PBO:0026899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026899"}


id: PBO:0045396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 2 pseudogene 3","termid":"PBO:0045396"}


id: PBO:0029265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029265"}


id: PBO:0045946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal Fyn-associated substrate","termid":"PBO:0045946"}


id: PBO:0051065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-17","termid":"PBO:0051065"}


id: PATO:0001164
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the bearer's exhibiting density.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dense","termid":"PATO:0001164"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PMID:18065650","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: SO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is orthologous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"orthologous","termid":"SO:0000858"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Ortholog#Orthology"],"synonyms":[{"name":"ortholog","type":"exact"},{"name":"orthologous region","type":"exact"},{"name":"orthologue","type":"exact"}],"termid":"SO:0000855"}


id: GO:1902745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000058","PMID:16054028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"positively_regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lamellipodium organization","synonyms":[{"name":"activation of lamellipodium organization","type":"narrow"},{"name":"up regulation of lamellipodium organization","type":"exact"},{"name":"up-regulation of lamellipodium organization","type":"exact"},{"name":"upregulation of lamellipodium organization","type":"exact"}],"termid":"GO:1902745"}


id: PBO:0030865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_actomyosin_contractile_ring","termid":"PBO:0030865"}


id: PBO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 2","termid":"PBO:0043430"}


id: PBO:0075743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 2","termid":"PBO:0075743"}


id: GO:0050435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving amyloid-beta, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta metabolic process","synonyms":[{"name":"amyloid-beta metabolism","type":"exact"},{"name":"beta-amyloid metabolic process","type":"exact"},{"name":"beta-amyloid metabolism","type":"exact"}],"termid":"GO:0050435"}


id: PBO:0038434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase","termid":"PBO:0038434"}


id: PBO:0084891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; membrane protein that interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084891"}


id: PBO:0087265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr kinase involved in late nuclear division; one of the mitotic exit network (MEN) proteins; necessary for the execution of cytokinesis; also plays a role in regulating the stability of SWI5 and CLB2 mRNAs; DBF20 has a paralog, DBF2, that arose from the whole genome duplication","termid":"PBO:0087265"}


id: GO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the electrosensory lateral line system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"electrosensory lateral line system development","termid":"GO:0048926"}


id: FYPO:0005610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to a smaller portion of the chromosome than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of protein localization to double-strand break site","synonyms":[{"name":"decreased spatial extent of protein localisation to double-strand break site","type":"exact"},{"name":"decreased spatial extent of protein localization to DSB","type":"exact"},{"name":"decreased spatial extent of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of protein localization to site of double-strand break","type":"exact"},{"name":"reduced spatial extent of protein localization to double-strand break","type":"exact"}],"termid":"FYPO:0005610"}


id: GO:0061243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the mesonephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}


id: PBO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with possible role in spore wall assembly; predicted to contain an N-terminal transmembrane domain; osw5 null mutant spores exhibit increased spore wall permeability and sensitivity to beta-glucanase digestion","termid":"PBO:0086076"}


id: GO:0098902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization during an action potential. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential.","definition_xrefs":["GOC:tb","GOC:dos","GOC:dph","ISBN:978-0-07-139011-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"regulates","term_name":"membrane depolarization during action potential","termid":"GO:0086010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"}


id: PBO:0030664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_leucine_import","termid":"PBO:0030664"}


id: PBO:0039565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 61","termid":"PBO:0039565"}


id: PBO:0046471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erbb2 interacting protein","termid":"PBO:0046471"}


id: PBO:0082297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARN family transporter for siderophore-iron chelates; responsible for uptake of iron bound to ferrirubin, ferrirhodin, and related siderophores; protein increases in abundance and relocalizes to the vacuole upon DNA replication stress","termid":"PBO:0082297"}


id: MOD:01567
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01567"}


id: PBO:0057688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1277","termid":"PBO:0057688"}


id: GO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kisspeptin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kisspeptin receptor binding","synonyms":[{"name":"G-protein coupled receptor 54 binding","type":"exact"},{"name":"KiSS-1 receptor binding","type":"exact"},{"name":"hOT7T175 receptor binding","type":"exact"},{"name":"hypogonadotropin-1 receptor binding","type":"exact"},{"name":"kisspeptin receptor ligand","type":"narrow"},{"name":"metastin receptor binding","type":"exact"}],"termid":"GO:0031773"}


id: PBO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 2","termid":"PBO:0046154"}


id: PR:P41390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amidophosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02227","PANTHER:PTHR11907:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.08c","secondary_identifiers":["UniProtKB:P41390"],"synonyms":[{"name":"ATase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPAT","type":"exact"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41390"}


id: PBO:0067209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 274, pseudogene","termid":"PBO:0067209"}


id: PBO:0002227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase Pmm1","termid":"PBO:0002227"}


id: PBO:0025461
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate metabolism disorders","termid":"PBO:0025461"}


id: PBO:0072889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 1","termid":"PBO:0072889"}


id: PR:P0CT58
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2201 gene.","definition_xrefs":["UniProtKB:P0CT58","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.04c","synonyms":[{"name":"Spom972h-rps2201","type":"exact"}],"termid":"PR:P0CT58"}


id: GO:2001144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity","termid":"GO:2001144"}


id: PBO:0044341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 25","termid":"PBO:0044341"}


id: GO:2001017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of microtubule-based movement","termid":"GO:0060632"},{"relation_name":"regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of retrograde axon cargo transport","synonyms":[{"name":"regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001017"}


id: PBO:0086184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for uridine thiolation of Lys(UUU) and Glu(UUC) tRNAs; required for the thiolation of uridine at the wobble position of Lys(UUU) and Glu(UUC) tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae","termid":"PBO:0086184"}


id: GO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the uptake of a G protein-coupled receptor into an endocytic vesicle.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"G protein-coupled receptor internalization","synonyms":[{"name":"G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:0002031"}


id: PBO:0017550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1","termid":"PBO:0017550"}


id: PBO:0078471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-9","termid":"PBO:0078471"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: PBO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4-Dependent Expression","termid":"PBO:0004655"}


id: PR:O13941
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C23H3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.11c","synonyms":[{"name":"Spom972h-SPAC23H3.11c","type":"exact"}],"termid":"PR:O13941"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71280,73169],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["PMID:8621375","EC:2.5.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2530501","Reactome:R-HSA-9647978","RHEA:13345","GO:0018223","MetaCyc:RXN-17573"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: GO:1902733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GO_REF:0000058","PMID:23212449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:1902738"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte differentiation","termid":"GO:1902733"}


id: FYPO:0007611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are smaller, and the total number of mitochondria in the cell is lower, than normal.  Total mitochondrial volume is therefore lower than normal normal.","definition_xrefs":["PMID:31562247","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"has_part","term_name":"decreased mitochondrial volume","termid":"FYPO:0007610"},{"relation_name":"is_a","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"small fragmented mitochondria present in decreased numbers","synonyms":[{"name":"small mitochondria with decreased mitochondrial volume during mitotic cell cycle","type":"related"},{"name":"small mitochondria with decreased total mitochondrial volume during vegetative growth","type":"exact"},{"name":"small mitochondria with reduced mitochondrial volume","type":"exact"}],"termid":"FYPO:0007611"}


id: PR:P32235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P32235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.01","synonyms":[{"name":"Spom972h-gtp1","type":"exact"}],"termid":"PR:P32235"}


id: GO:0016625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.2.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016625"}


id: PBO:0070689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 60","termid":"PBO:0070689"}


id: GO:0052507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont jasmonic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway (obsolete GO:0052507)","synonyms":[{"name":"activation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related symbiont jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052507"}


id: GO:0098627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein arginine phosphate + H2O = protein arginine + phosphate.","definition_xrefs":["PMID:23770242","RHEA:43380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","termid":"GO:0016825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0003674","GO:0004721","GO:0016788"],"is_obsolete":false,"name":"protein arginine phosphatase activity","secondary_identifiers":["EC:3.9.1.2"],"termid":"GO:0098627"}


id: PBO:0073741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 1","termid":"PBO:0073741"}


id: PBO:0083197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene KNS1","termid":"PBO:0083197"}


id: GO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of entry into host (obsolete GO:0052374)","synonyms":[{"name":"down regulation by symbiont of entry into host","type":"exact"},{"name":"down-regulation by symbiont of entry into host","type":"exact"},{"name":"downregulation by symbiont of entry into host","type":"exact"},{"name":"inhibition by symbiont of entry into host","type":"narrow"}],"termid":"GO:0052374"}


id: PBO:0070035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1332, pseudogene","termid":"PBO:0070035"}


id: PBO:0062057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 4 pseudogene","termid":"PBO:0062057"}


id: GO:0006470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphoric residues from a protein.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dephosphorylation","synonyms":[{"name":"protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0006470"}


id: GO:0033468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CMP-keto-3-deoxy-D-manno-octulosonic acid, a substance composed of the acidic sugar 3-deoxy-D-manno-octulosonic acid in glycosidic linkage with cytidine monophosphate.","definition_xrefs":["MetaCyc:PWY-5111","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process","termid":"GO:0033467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1269","MetaCyc:KDOSYN-PWY"],"synonyms":[{"name":"CMP-KDO biosynthesis","type":"exact"},{"name":"CMP-KDO biosynthetic process","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid anabolism","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthesis","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid formation","type":"exact"},{"name":"CMP-keto-3-deoxy-D-manno-octulosonic acid synthesis","type":"exact"},{"name":"CMP-ketodeoxyoctanoate biosynthetic process","type":"related"}],"termid":"GO:0033468"}


id: GO:0005047
data:
  {"annotated_genes":["SJAG_00360","SJAG_01759","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72151,78322,89904],"is_not":false,"summary":null,"term":"GO:0005047"}]},"cv_name":"molecular_function","definition":"Binding to a signal recognition particle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null,"SJAG_01759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"signal recognition particle binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"docking protein","type":"broad"},{"name":"signal recognition particle receptor","type":"narrow"}],"termid":"GO:0005047","terms_by_termid":{"GO:0005047":null}}


id: PBO:0029006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intron-specific_abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0029006"}


id: GO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA polymerase II transcriptional preinitiation complex assembly.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of RNA polymerase II transcription preinitiation complex assembly","termid":"GO:0045898"},{"relation_name":"is_a","term_name":"negative regulation of transcription initiation by RNA polymerase II","termid":"GO:0060633"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II preinitiation complex assembly","termid":"GO:0051123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0006355","GO:0006351","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"negative regulation of RNA polymerase II transcription preinitiation complex assembly","synonyms":[{"name":"down regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"down-regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"downregulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"inhibition of RNA polymerase II transcriptional preinitiation complex assembly","type":"narrow"},{"name":"negative regulation of RNA polymerase II transcriptional pre-initiation complex assembly","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional pre-initiation complex biosynthesis","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional preinitiation complex assembly","type":"exact"},{"name":"negative regulation of RNA polymerase II transcriptional preinitiation complex formation","type":"exact"}],"termid":"GO:0017055"}


id: GO:0046424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ferulic acid + NADPH + H+ + O2 = 5-hydroxyferulic acid + H2O + NADP+.","definition_xrefs":["PMID:9880351","PMID:8692910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ferulate 5-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-1121"],"termid":"GO:0046424"}


id: GO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["GOC:jl","PMID:11823218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectoine metabolic process","termid":"GO:0042399"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ectoine catabolic process","synonyms":[{"name":"ectoine breakdown","type":"exact"},{"name":"ectoine catabolism","type":"exact"},{"name":"ectoine degradation","type":"exact"}],"termid":"GO:0042400"}


id: GO:0008519
data:
  {"annotated_genes":["SJAG_04136","SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74694],"is_not":false,"summary":null,"term":"GO:0008519"},{"annotations":[114170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015398"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals.","definition_xrefs":["PMID:17710640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051739","GO:0015251","Reactome:R-HSA-446277","Reactome:R-HSA-446278","Reactome:R-HSA-444419","RHEA:28747","Reactome:R-HSA-444393","TC:1.A.11","Reactome:R-HSA-5623051","Reactome:R-HSA-444416"],"synonyms":[{"name":"ammonia transmembrane transporter activity","type":"related"},{"name":"ammonium channel activity","type":"related"}],"termid":"GO:0008519","terms_by_termid":{"GO:0008519":null,"GO:0015398":null}}


id: GO:0090482
data:
  {"annotated_genes":["SJAG_05175","SJAG_02779","SJAG_04673","SJAG_00835","SJAG_02962","SJAG_03652","SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[73410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[96198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[72264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[99125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[85873,85872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a vitamin from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02779":null,"SJAG_02962":null,"SJAG_03503":null,"SJAG_03652":null,"SJAG_04673":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"vitamin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051183"],"synonyms":[{"name":"vitamin or cofactor transporter activity","type":"broad"},{"name":"vitamin transporter activity","type":"related"}],"termid":"GO:0090482","terms_by_termid":{"GO:0008517":null,"GO:0015225":null,"GO:0015233":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: PR:Q92374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssb3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor A protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.05c","synonyms":[{"name":"Spom972h-ssb3","type":"exact"},{"name":"single-stranded DNA-binding protein P12 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92374"}


id: GO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["GOC:ai","PMID:10871297","GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051441)","synonyms":[{"name":"APC activation during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity involved in meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity of APC during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase promoting complex during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase-promoting complex during meiotic cell cycle","type":"related"},{"name":"anaphase promoting complex activation during meiotic cell cycle","type":"related"},{"name":"anaphase-promoting complex activation during meiotic cell cycle","type":"related"},{"name":"meiotic APC activation","type":"exact"},{"name":"meiotic APC activator","type":"narrow"},{"name":"meiotic SCF complex activator","type":"narrow"},{"name":"meiotic anaphase promoting complex activation","type":"related"},{"name":"meiotic anaphase promoting complex activator","type":"narrow"},{"name":"meiotic anaphase-promoting complex activator","type":"narrow"},{"name":"meiotic ubiquitin ligase activator","type":"narrow"},{"name":"positive regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"positive regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"},{"name":"stimulation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"up-regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"upregulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051441"}


id: PBO:0091811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER insertion of tail-anchored membrane proteins","termid":"PBO:0091811"}


id: PBO:0064192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 activating protein","termid":"PBO:0064192"}


id: PBO:0038673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL6 antisense RNA 1","termid":"PBO:0038673"}


id: GO:0060194
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:dph","PMID:18075583","GOC:jp","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ncRNA transcription","termid":"GO:0140747"},{"relation_name":"regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060194","terms_by_termid":{"GO:0060195":null}}


id: PBO:0029863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_morphology_during_mitosis","termid":"PBO:0029863"}


id: PBO:0002164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fyv7 (predicted)","termid":"PBO:0002164"}


id: GO:0140976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular processes and signaling pathways by which a cell responds to disruption of the integrity of its plasma membrane by another organism. Some toxins produced by other organisms can form pores in membranes, or affect the membrane permeability.","definition_xrefs":["PMID:17234446","PMID:21518219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response against perturbation of plasma membrane integrity","synonyms":[{"name":"defense response against disruption of plasma membrane integrity","type":"exact"}],"termid":"GO:0140976"}


id: PBO:0070703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 7","termid":"PBO:0070703"}


id: GO:0007475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The coming together of the dorsal and ventral surfaces of the imaginal disc-derived wing during the conversion of a folded single layered wing disc to a flat bilayered wing.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing margin morphogenesis","termid":"GO:0008587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apposition of dorsal and ventral imaginal disc-derived wing surfaces","synonyms":[{"name":"apposition of dorsal and ventral wing surfaces","type":"exact"}],"termid":"GO:0007475"}


id: PBO:0044085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A5","termid":"PBO:0044085"}


id: GO:0006019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into deoxyribose 5-phosphate to produce deoxyribose bisphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"deoxyribose 5-phosphate metabolic process","termid":"GO:0046389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose 5-phosphate phosphorylation","termid":"GO:0006019"}


id: PBO:0014616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog Lnp1","termid":"PBO:0014616"}


id: PBO:0058913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12131","termid":"PBO:0058913"}


id: PBO:0017911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu18","termid":"PBO:0017911"}


id: PBO:0035893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_modification_during_vegetative_growth","termid":"PBO:0035893"}


id: PBO:0063606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4","termid":"PBO:0063606"}


id: PBO:0053911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1205","termid":"PBO:0053911"}


id: PBO:0031096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_following_spore_germination","termid":"PBO:0031096"}


id: GO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into the body, tissues, or cells of a host organism as part of the symbiont life cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host","secondary_identifiers":["GO:0051828","GO:0044411","GO:0075052","GO:0051830","GO:0085027","GO:0085028","GO:0030260","GO:0051806"],"synonyms":[{"name":"entry into cell of other organism during symbiotic interaction","type":"narrow"},{"name":"entry into cell of other organism involved in symbiotic interaction","type":"related"},{"name":"entry into host","type":"exact"},{"name":"entry into host cell via penetration peg","type":"narrow"},{"name":"entry into host through host barriers","type":"related"},{"name":"entry into host via a specialized structure during symbiotic interaction","type":"narrow"},{"name":"entry into host via enzymatic degradation of host anatomical structure","type":"narrow"},{"name":"entry into host via enzymatic degradation of host cuticle","type":"narrow"},{"name":"entry into other organism during symbiotic interaction","type":"related"},{"name":"entry into other organism involved in symbiotic interaction","type":"related"},{"name":"host invasion","type":"exact"},{"name":"host penetration","type":"exact"},{"name":"invasion into host","type":"exact"},{"name":"invasion into other organism","type":"related"},{"name":"invasion of host","type":"exact"},{"name":"invasion of other organism","type":"related"},{"name":"invasive growth","type":"related"},{"name":"other organism invasion","type":"related"},{"name":"penetration into host","type":"exact"},{"name":"penetration into host via a specialized structure","type":"narrow"},{"name":"penetration into host via a specialized structure during symbiotic interaction","type":"narrow"}],"termid":"GO:0044409"}


id: PBO:0041692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin receptor like receptor","termid":"PBO:0041692"}


id: PR:O13950
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle receptor subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19326:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.07c","secondary_identifiers":["UniProtKB:O13950"],"synonyms":[{"name":"SPAC23H4.07c","type":"related"},{"name":"SR-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRPRB","type":"exact"}],"termid":"PR:O13950"}


id: PBO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, CENP-I ortholog Mis6","termid":"PBO:0000674"}


id: PBO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Heh1/Lem2","termid":"PBO:0001428"}


id: GO:1901660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion out of a cell or organelle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium ion export","termid":"GO:1901660"}


id: MOD:01364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:11467524","Unimod:478#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site S","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01364"}


id: PBO:0031280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_colony_morphology","termid":"PBO:0031280"}


id: GO:0019115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NAD(P)+ + H2O = benzoate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.7","EC:1.2.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase [NAD(P)+] activity","secondary_identifiers":["EC:1.2.1.-"],"termid":"GO:0019115"}


id: PBO:0029340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_zinc","termid":"PBO:0029340"}


id: GO:1902801
data:
  {"annotated_genes":["SJAG_03624","SJAG_01599","SJAG_02622","SJAG_01867","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87528,92773,95826,112972,113313],"is_not":false,"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siRNA-independent facultative heterochromatin assembly.","definition_xrefs":["GOC:TermGenie","PMID:24210919","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"siRNA-independent facultative heterochromatin formation","termid":"GO:1902794"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_01867":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin island assembly","type":"exact"},{"name":"regulation of heterochromatin island formation","type":"exact"},{"name":"regulation of siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902801","terms_by_termid":{"GO:1902801":null}}


id: GO:0021933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inward migration of postmitotic granule cells along a radial glial cell from the external granule layer to the internal granule cell layer.","definition_xrefs":["PMID:15157725","GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia guided migration of cerebellar granule cell","termid":"GO:0021933"}


id: GO:0102593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methylanthranilate + UDP-alpha-D-glucose = N-methylanthraniloyl-beta-D-glucopyranose + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose: N-methylanthranilate glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15371"],"termid":"GO:0102593"}


id: PBO:0069994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1289, pseudogene","termid":"PBO:0069994"}


id: GO:0042181
data:
  {"annotated_genes":["SJAG_01911","SJAG_01668","SJAG_04000","SJAG_00459","SJAG_00933","SJAG_00721","SJAG_01820","SJAG_01063","SJAG_01043","SJAG_01866","SJAG_04223","SJAG_04642","SJAG_04568","SJAG_01672","SJAG_01865","SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84936],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[73403,83501,73555,98443,73591,85363,77379,105068,110160,72586,114498,110495,114499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[103582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"},{"annotations":[111127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01063":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_01911":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketone biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"ketone anabolism","type":"exact"},{"name":"ketone biosynthesis","type":"exact"},{"name":"ketone formation","type":"exact"},{"name":"ketone synthesis","type":"exact"}],"termid":"GO:0042181","terms_by_termid":{"GO:0006744":null,"GO:0032194":null,"GO:1901006":null,"GO:1904775":null}}


id: PBO:0087328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting factor, central regulator of spatial protein quality control; physically and functionally interacts with chaperones to promote sorting and deposition of misfolded proteins into cytosolic compartments; involved in destabilization of [URE3] prions; CUR1 has a paralog, BTN2, that arose from the whole genome duplication","termid":"PBO:0087328"}


id: PBO:0110973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog, implicated in transcription or signalling, possibly phosphate starvation response","termid":"PBO:0110973"}


id: GO:0052807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aflatoxin + 1,5-dihydrocoenzyme F420 = aflatoxin with reduced furanocoumarin moiety + coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aflatoxin reductase (coenzyme F420) activity","synonyms":[{"name":"aflatoxin:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"aflatoxin:reduced coenzyme F420 reductase activity","type":"exact"},{"name":"coenzyme F420-aflatoxin reductase activity","type":"exact"},{"name":"coenzyme F420-dependent aflatoxin reductase activity","type":"exact"}],"termid":"GO:0052807"}


id: GO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of insulin receptor signaling pathway","termid":"GO:0046626"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to insulin stimulus","termid":"GO:1900078"},{"relation_name":"positively_regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of insulin receptor signaling pathway","synonyms":[{"name":"activation of insulin receptor signaling pathway","type":"narrow"},{"name":"positive regulation of insulin receptor signalling pathway","type":"exact"},{"name":"stimulation of insulin receptor signaling pathway","type":"narrow"},{"name":"up regulation of insulin receptor signaling pathway","type":"exact"},{"name":"up-regulation of insulin receptor signaling pathway","type":"exact"},{"name":"upregulation of insulin receptor signaling pathway","type":"exact"}],"termid":"GO:0046628"}


id: PBO:0075170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide E","termid":"PBO:0075170"}


id: PBO:0077031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase like 2","termid":"PBO:0077031"}


id: GO:1901612
data:
  {"annotated_genes":["SJAG_00368","SJAG_03563"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101647,102029],"is_not":false,"summary":null,"term":"GO:1901612"}]},"cv_name":"molecular_function","definition":"Binding to cardiolipin.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol binding","termid":"GO:1901611"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cardiolipin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901612","terms_by_termid":{"GO:1901612":null}}


id: PBO:0088385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","termid":"PBO:0088385"}


id: GO:0102233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis)-crotonaldehyde + NADPH + H+ = butanal + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"crotonaldehyde redutase activity","secondary_identifiers":["MetaCyc:RXN-12292"],"termid":"GO:0102233"}


id: PBO:0080638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR86 antisense RNA 1","termid":"PBO:0080638"}


id: PBO:0064058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 92","termid":"PBO:0064058"}


id: FYPO:0001586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell end during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0001586"}


id: PBO:0085884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in ER-associated protein degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and is induced in response to the DNA-damaging agent MMS; YMR184W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0085884"}


id: PBO:0087710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087710"}


id: PBO:0090408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Rsv1","termid":"PBO:0090408"}


id: GO:0019405
data:
  {"annotated_genes":["SJAG_04320","SJAG_04048","SJAG_04192","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[71960,77500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[72665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"alditol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"alditol catabolism","type":"exact"},{"name":"alditol degradation","type":"exact"},{"name":"alditol breakdown","type":"exact"}],"termid":"GO:0019405","terms_by_termid":{"GO:0006062":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: PBO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 1","termid":"PBO:0042935"}


id: PBO:0043912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 2","termid":"PBO:0043912"}


id: GO:0009910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flower development","synonyms":[{"name":"down regulation of flower development","type":"exact"},{"name":"down-regulation of flower development","type":"exact"},{"name":"downregulation of flower development","type":"exact"},{"name":"inhibition of flower development","type":"narrow"}],"termid":"GO:0009910"}


id: GO:0007264
data:
  {"annotated_genes":["SJAG_03936","SJAG_04776","SJAG_03342","SJAG_00883","SJAG_03681","SJAG_03376","SJAG_01464","SJAG_02232","SJAG_01188","SJAG_04455","SJAG_03048","SJAG_01805","SJAG_04943","SJAG_02514","SJAG_04464","SJAG_00082","SJAG_04597","SJAG_03353","SJAG_01790","SJAG_03508","SJAG_03592","SJAG_00229","SJAG_01386","SJAG_04468","SJAG_03361","SJAG_06270","SJAG_02169","SJAG_00526","SJAG_02520","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72158],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[105545,102965,95116,102658,96794,100482,87395,88484,86432,72355,88563,89096,91245,111169],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[97882,105887,89446,83327,85724],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[100504,106363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031291"},{"annotations":[88485],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0046578"},{"annotations":[95067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007266"},{"annotations":[73796,96467,101824,102520,84985,90040,102565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031028"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03361":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04464":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"small GTPase-mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Ras family protein signal transduction","type":"narrow"},{"name":"small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0007264","terms_by_termid":{"GO:0007266":null,"GO:0031028":null,"GO:0031030":null,"GO:0031031":null,"GO:0031291":null,"GO:0046578":null,"GO:0046580":null}}


id: FYPO:0007417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere clustering is normal (i.e. indistinguishable from wild type) during G0 phase. Normally, telomeres cluster at the nuclear periphery during vegetative growth or G0, but whereas telomeres form two to three clusters in vegetative cells, a single cluster forms in G0.","definition_xrefs":["PMID:31980821","PomBase:mah","GO:0120110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere clustering during G0","synonyms":[{"name":"normal telomere clustering during cell quiescence","type":"exact"},{"name":"normal telomere clustering during quiescence","type":"exact"}],"termid":"FYPO:0007417"}


id: PBO:0091995
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tfb6 annotation seems tenuous, SGD have not annotated","termid":"PBO:0091995"}


id: PBO:0041760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein, gelsolin like","termid":"PBO:0041760"}


id: PBO:0038449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0038449"}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["RHEA:70827","PMID:10903140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: PBO:0090899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar serine protease Psp3","termid":"PBO:0090899"}


id: PBO:0085868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has weak similarity to E. coli GTP-binding protein gtp1; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085868"}


id: MOD:00042
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartic 4-phosphoric anhydride.","definition_xrefs":["RESID:AA0033","ChEBI:15836","PubMed:4357737","Unimod:21#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"L-aspartic 4-phosphoric anhydride","synonyms":[{"name":"(2S)-2-amino-4-oxo-4-(phosphonooxy)butanoic acid","type":"exact"},{"name":"2-aminobutanedioic 4-phosphoric anhydride","type":"exact"},{"name":"2-azanyl-4-oxo-4-(phosphonooxy)butanoic acid","type":"exact"},{"name":"4-oxo-O-phosphono-L-homoserine","type":"exact"},{"name":"4-phosphoaspartic acid","type":"exact"},{"name":"4-phosphorylated L-aspartatic acid","type":"exact"},{"name":"ACT_SITE 4-aspartylphosphate intermediate","type":"exact"},{"name":"L-aspartic 4-phosphoric anhydride","type":"exact"},{"name":"MOD_RES 4-aspartylphosphate","type":"exact"},{"name":"PAsp","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"beta-aspartyl phosphate","type":"exact"}],"termid":"MOD:00042"}


id: GO:1901712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of homoserine biosynthetic process","synonyms":[{"name":"activation of homoserine anabolism","type":"exact"},{"name":"activation of homoserine biosynthesis","type":"exact"},{"name":"activation of homoserine biosynthetic process","type":"narrow"},{"name":"activation of homoserine formation","type":"exact"},{"name":"activation of homoserine synthesis","type":"exact"},{"name":"positive regulation of homoserine anabolism","type":"exact"},{"name":"positive regulation of homoserine biosynthesis","type":"exact"},{"name":"positive regulation of homoserine formation","type":"exact"},{"name":"positive regulation of homoserine synthesis","type":"exact"},{"name":"up regulation of homoserine anabolism","type":"exact"},{"name":"up regulation of homoserine biosynthesis","type":"exact"},{"name":"up regulation of homoserine biosynthetic process","type":"exact"},{"name":"up regulation of homoserine formation","type":"exact"},{"name":"up regulation of homoserine synthesis","type":"exact"},{"name":"up-regulation of homoserine anabolism","type":"exact"},{"name":"up-regulation of homoserine biosynthesis","type":"exact"},{"name":"up-regulation of homoserine biosynthetic process","type":"exact"},{"name":"up-regulation of homoserine formation","type":"exact"},{"name":"up-regulation of homoserine synthesis","type":"exact"},{"name":"upregulation of homoserine anabolism","type":"exact"},{"name":"upregulation of homoserine biosynthesis","type":"exact"},{"name":"upregulation of homoserine biosynthetic process","type":"exact"},{"name":"upregulation of homoserine formation","type":"exact"},{"name":"upregulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901712"}


id: GO:0021865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The mitotic division of a radial glial cell giving rise to two new radial glial cells in the forebrain.","definition_xrefs":["GOC:jid","GO_REF:0000021","PMID:16226447","GOC:cls","GOC:dph","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete symmetric radial glial cell division in forebrain (obsolete GO:0021865)","termid":"GO:0021865"}


id: PBO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 2","termid":"PBO:0061669"}


id: PBO:0088614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferase subunit Sno1","termid":"PBO:0088614"}


id: GO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-3-hydroxykynurenine + H2O = 3-hydroxyanthranilate + L-alanine.","definition_xrefs":["PMID:17300176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3-hydroxykynureninase activity","secondary_identifiers":["RHEA:25143"],"termid":"GO:0061981"}


id: PBO:0085969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; YOL036W has a paralog, YIR016W, that arose from the whole genome duplication","termid":"PBO:0085969"}


id: SO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_translocation","termid":"SO:0001884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_translocation","synonyms":[{"name":"TFBS binding site translocation","type":"exact"},{"name":"transcription factor binding site translocation","type":"exact"}],"termid":"SO:0001885"}


id: PBO:0062788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2","termid":"PBO:0062788"}


id: PBO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor beta","termid":"PBO:0046671"}


id: PBO:0068953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 197, pseudogene","termid":"PBO:0068953"}


id: GO:0010336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of gibberellic acid; may involve transport, biosynthesis, catabolism or conjugation.","definition_xrefs":["PMID:17194763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gibberellic acid homeostasis","synonyms":[{"name":"gibberellin homeostasis","type":"broad"}],"termid":"GO:0010336"}


id: PBO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 22","termid":"PBO:0072052"}


id: PBO:0066913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 214","termid":"PBO:0066913"}


id: PBO:0089422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim44","termid":"PBO:0089422"}


id: PBO:0082808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of yeast cortical actin cytoskeleton; binds and cross links actin filaments; originally identified by its homology to calponin (contains a calponin-like repeat) but the Scp1p domain structure is more similar to transgelin","termid":"PBO:0082808"}


id: FYPO:0000554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which pseudohyphal growth is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal pseudohyphal growth","secondary_identifiers":["FYPO:0000439"],"synonyms":[{"name":"filamentous growth: normal","type":"broad"},{"name":"normal filamentous growth","type":"broad"},{"name":"pseudohyphal growth: normal","type":"related"}],"termid":"FYPO:0000554"}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_00158","SJAG_04790","SJAG_02068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98837,99483,110362],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid.","definition_xrefs":["EC:3.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"sterol esterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:STEROL-ESTERASE-RXN","Reactome:R-HSA-6813720","Reactome:R-HSA-192417","Reactome:R-HSA-8865667","RHEA:10100"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: PBO:0030332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_phospholipid_level","termid":"PBO:0030332"}


id: PBO:0109124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 475","termid":"PBO:0109124"}


id: GO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah","PMID:1708436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, arms","termid":"GO:0071961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:0071959"}


id: GO:1990183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory process that occurs at the level of the lymphatic vasculature.","definition_xrefs":["PMID:21576390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}


id: PBO:0044837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 125","termid":"PBO:0044837"}


id: PBO:0089698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1","termid":"PBO:0089698"}


id: PBO:0083502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W","termid":"PBO:0083502"}


id: PBO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 15 pseudogene","termid":"PBO:0042640"}


id: GO:0099528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotransmitter and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:fj","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity","type":"exact"}],"termid":"GO:0099528"}


id: PATO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for acidic dyes under specific ph conditions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidophilic","termid":"PATO:0002418"}


id: PBO:0075147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 3","termid":"PBO:0075147"}


id: GO:0051159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol catabolic process","termid":"GO:0051157"},{"relation_name":"is_a","term_name":"D-arabitol metabolic process","termid":"GO:0051163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-arabitol catabolic process","synonyms":[{"name":"D-arabitol breakdown","type":"exact"},{"name":"D-arabitol catabolism","type":"exact"},{"name":"D-arabitol degradation","type":"exact"}],"termid":"GO:0051159"}


id: GO:0140768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An enzyme-substrate adaptor that bings together a protein ADP-ribosyl transferase and its substrate.","definition_xrefs":["PMID:32028527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-substrate adaptor activity","termid":"GO:0140767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"protein ADP-ribosyltransferase-substrate adaptor activity","termid":"GO:0140768"}


id: GO:0021532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube patterning","termid":"GO:0021532"}


id: GO:0060579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a ventral spinal cord interneuron. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"part_of","term_name":"spinal cord dorsal/ventral patterning","termid":"GO:0021513"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron differentiation","termid":"GO:0021514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}


id: PBO:0048087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 8","termid":"PBO:0048087"}


id: GO:0004435
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72492],"is_not":false,"summary":null,"term":"GO:0004435"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H+.","definition_xrefs":["RHEA:33179","EC:3.1.4.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phospholipase C activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-111879","Reactome:R-HSA-1855214","KEGG_REACTION:R03435","Reactome:R-HSA-1855221","Reactome:R-HSA-202407","Reactome:R-HSA-2730847","Reactome:R-HSA-5607735","Reactome:R-HSA-9717205","Reactome:R-HSA-622382","Reactome:R-HSA-9032478","MetaCyc:3.1.4.11-RXN","Reactome:R-HSA-1855177","Reactome:R-HSA-167686"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase activity","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol-4,5-bisphosphate inositoltrisphosphohydrolase activity","type":"related"},{"name":"1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase activity","type":"exact"},{"name":"PI-PLC activity","type":"related"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"},{"name":"phosphatidylinositol-4,5-bisphosphate hydrolysis","type":"related"},{"name":"phosphoinositidase C activity","type":"related"},{"name":"phosphoinositide phospholipase C activity","type":"related"},{"name":"triphosphoinositide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004435","terms_by_termid":{"GO:0004435":null}}


id: PBO:0108551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone for translation factor EF2, armadillo-type fold, Hgh1","termid":"PBO:0108551"}


id: GO:2000641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"}


id: GO:0048889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast support cell differentiation","termid":"GO:0048889"}


id: GO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an associated organism causes the formation of an abnormal mass of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth (obsolete GO:0051853)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth","type":"exact"}],"termid":"GO:0051853"}


id: GO:1902276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"}


id: PR:O59786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ferrochelatase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04207","PRO:DNx","PANTHER:PTHR11108:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.09","secondary_identifiers":["UniProtKB:O59786"],"synonyms":[{"name":"Spom972h-FECH","type":"exact"},{"name":"heme synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protoheme ferro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59786"}


id: PBO:0051347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-30","termid":"PBO:0051347"}


id: GO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP-N-acetyl-D-glucosamine = GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol + UDP.","definition_xrefs":["MetaCyc:2.4.1.227-RXN","EC:2.4.1.227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8976","RHEA:23192"],"synonyms":[{"name":"MurG transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:N-acetyl-alpha-D-muramyl(oyl-L-Ala- gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-1,4-N-acetylglucosaminlytransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase activity","type":"related"},{"name":"undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase activity","type":"related"},{"name":"undecaprenyldiphospho-muramoylpentapeptide b-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0050511"}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["GOC:mah","CHEBI:17310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: PR:O13882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps18 gene.","definition_xrefs":["UniProtKB:O13882","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S18, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.18c","synonyms":[{"name":"Spom972h-mrps18","type":"exact"}],"termid":"PR:O13882"}


id: PBO:0073786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 6","termid":"PBO:0073786"}


id: GO:1901386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated calcium channel","type":"broad"},{"name":"downregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"downregulation of voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated calcium channel","type":"broad"},{"name":"inhibition of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"inhibition of voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of voltage-gated calcium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated calcium ion channel activity","type":"exact"},{"name":"inhibition of voltage-sensitive calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated calcium channel","type":"broad"},{"name":"negative regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"negative regulation of voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901386"}


id: PBO:0029816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape","termid":"PBO:0029816"}


id: PBO:0048294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase pseudogene 1","termid":"PBO:0048294"}


id: PBO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 1","termid":"PBO:0080064"}


id: MOD:00254
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["PubMed:209034","RESID:AA0249","PubMed:6264310","PubMed:1702164","PubMed:217003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-RNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-ribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-RNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00254"}


id: PBO:0060674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDFIP2 antisense RNA 1","termid":"PBO:0060674"}


id: GO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0046017)","synonyms":[{"name":"mitotic regulation of transcription from Pol I promoter","type":"exact"},{"name":"regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"}],"termid":"GO:0046017"}


id: PBO:0039709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A1","termid":"PBO:0039709"}


id: PBO:0088374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5","termid":"PBO:0088374"}


id: PBO:0084871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to mammalian apoptosis mediator proteins; null mutation prevents induction of apoptosis by overproduction of metacaspase Mca1p","termid":"PBO:0084871"}


id: GO:0047597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxocineole + H+ + NADPH + O2 = 1,6,6-trimethyl-2,7-dioxabicyclo[3.2.2]nonan-3-one + H2O + NADP+.","definition_xrefs":["EC:1.14.13.51","RHEA:24324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"6-oxocineole dehydrogenase activity","secondary_identifiers":["MetaCyc:6-OXOCINEOLE-DEHYDROGENASE-RXN","KEGG_REACTION:R02995"],"synonyms":[{"name":"6-oxocineole oxygenase activity","type":"related"},{"name":"6-oxocineole,NADPH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047597"}


id: PBO:0085470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prephenate dehydrogenase involved in tyrosine biosynthesis; expression is dependent on phenylalanine levels","termid":"PBO:0085470"}


id: GO:1904550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arachidonic acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arachidonic acid","termid":"GO:1904550"}


id: PBO:0048606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB10 interacting GYF protein 2","termid":"PBO:0048606"}


id: PBO:0060386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardial zonula adherens protein","termid":"PBO:0060386"}


id: GO:0031914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic plasticity","synonyms":[{"name":"down regulation of synaptic plasticity","type":"exact"},{"name":"down-regulation of synaptic plasticity","type":"exact"},{"name":"downregulation of synaptic plasticity","type":"exact"},{"name":"inhibition of synaptic plasticity","type":"narrow"}],"termid":"GO:0031914"}


id: GO:0072756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paraquat stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"response to paraquat","termid":"GO:1901562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to paraquat","termid":"GO:0072756"}


id: PBO:0038613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like","termid":"PBO:0038613"}


id: PBO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 2","termid":"PBO:0043972"}


id: GO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + 2 ferricytochrome c = glyoxylate + NH3 + 2 ferrocytochrome c.","definition_xrefs":["EC:1.4.2.1","MetaCyc:GLYCINE-DEHYDROGENASE-CYTOCHROME-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","termid":"GO:0016640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:16909"],"synonyms":[{"name":"glycine-cytochrome c reductase activity","type":"related"},{"name":"glycine:ferricytochrome-c oxidoreductase (deaminating)","type":"related"},{"name":"reductase, glycine-cytochrome c","type":"related"}],"termid":"GO:0047959"}


id: PBO:0012853
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWo Spored","termid":"PBO:0012853"}


id: FYPO:0000332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"},{"relation_name":"is_a","term_name":"increased protein acetylation during vegetative growth","termid":"FYPO:0004487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone acetylation during vegetative growth","synonyms":[{"name":"increased histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000332"}


id: PBO:0079621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L6","termid":"PBO:0079621"}


id: PBO:0088315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQC complex ubiquitin-protein ligase E3 Rkr1","termid":"PBO:0088315"}


id: PBO:0085719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in targeting mitochondrial membrane protein precursors to mitochondrial translocation system; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YIL029C has a paralog, YPR071W, that arose from a single-locus duplication","termid":"PBO:0085719"}


id: PBO:0082992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper-zinc superoxide dismutase; detoxifies superoxide; stabilizes Yck1p and Yck2p kinases in glucose to repress respiration; phosphorylated by Dun1p, enters nucleus under oxidative stress to promote transcription of stress response genes; human ortholog SOD1 implicated in ALS complements a null allele; abundance increases under DNA replication stress and during exposure to boric acid; localization to mitochondrial intermembrane space is modulated by MICOS complex","termid":"PBO:0082992"}


id: PBO:0042264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6A","termid":"PBO:0042264"}


id: GO:0071092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA3-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071092"}


id: PBO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT I complex subunit Vps23","termid":"PBO:0002685"}


id: SO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a translated sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_nucleotide_match","synonyms":[{"name":"translated nucleotide match","type":"exact"}],"termid":"SO:0000181"}


id: GO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cadherin, a type I membrane protein involved in cell adhesion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"cadherin binding","termid":"GO:0045296"}


id: FYPO:0000709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under nitrogen starvation conditions, such as in nitrogen-deficient minimal medium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth during nitrogen starvation","secondary_identifiers":["FYPO:0002124"],"synonyms":[{"name":"decreased cell population growth during nitrogen depletion","type":"exact"},{"name":"decreased cell population growth during nitrogen deprivation","type":"exact"},{"name":"decreased cell population growth in response to nitrogen starvation","type":"exact"},{"name":"hypersensitive to nitrogen starvation","type":"related"},{"name":"reduced cell population growth during nitrogen starvation","type":"related"},{"name":"sensitive to nitrogen depletion","type":"related"},{"name":"sensitive to nitrogen deprivation","type":"related"},{"name":"sensitive to nitrogen starvation","type":"related"},{"name":"slow cell population growth during nitrogen starvation","type":"narrow"},{"name":"slow cell population growth in nitrogen-deficient minimal medium","type":"related"},{"name":"slow growth during nitrogen starvation","type":"broad"}],"termid":"FYPO:0000709"}


id: PBO:0109458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP binding superfamily, involved in heme catabolism","termid":"PBO:0109458"}


id: GO:1903235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["GOC:TermGenie","PMID:16782817","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"positively_regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"activation of calcium ion-dependent exocytosis of neurotransmitter","type":"narrow"},{"name":"up regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"up-regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"upregulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:1903235"}


id: PBO:0088304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear element protein Mug20","termid":"PBO:0088304"}


id: PBO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase (predicted)","termid":"PBO:0002041"}


id: PBO:0073113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1","termid":"PBO:0073113"}


id: GO:0141008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon silencing","termid":"GO:0010526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotransposon silencing by mRNA destabilization","synonyms":[{"name":"post-transcriptional retrotransposon silencing","type":"exact"}],"termid":"GO:0141008"}


id: SO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of three nucleotide bases in tRNA. It has sequence T-Psi-C.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_loop","synonyms":[{"name":"T loop","type":"exact"},{"name":"TpsiC loop","type":"exact"}],"termid":"SO:0001177"}


id: PBO:0030970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030970"}


id: GO:0047358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein D-mannose + UDP-D-glucose = glycoprotein 6-(D-glucose-1-phospho)-D-mannose + UMP.","definition_xrefs":["EC:2.7.8.19","MetaCyc:2.7.8.19-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose-glycoprotein glucose phosphotransferase activity","secondary_identifiers":["RHEA:20181"],"synonyms":[{"name":"Glc-phosphotransferase activity","type":"related"},{"name":"GlcPTase activity","type":"related"},{"name":"UDP-glucose:glycoprotein glucose-1-phosphotransferase activity","type":"related"},{"name":"UDP-glucose:glycoprotein-D-mannose glucosephosphotransferase activity","type":"related"},{"name":"UDPglucose-glycoprotein glucose phosphotransferase activity","type":"related"},{"name":"UDPglucose:glycoprotein-D-mannose glucosephosphotransferase activity","type":"related"},{"name":"uridine diphosphoglucose-glycoprotein glucose-1-phosphotransferase activity","type":"related"}],"termid":"GO:0047358"}


id: FYPO:0005474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glutamate dehydrogenase (NADP+) activity","synonyms":[{"name":"normal NAD(P)H-dependent glutamate dehydrogenase activity","type":"exact"},{"name":"normal NADP-GDH activity","type":"exact"}],"termid":"FYPO:0005474"}


id: PBO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit","termid":"PBO:0032743"}


id: FYPO:0002104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable vegetative cell with normal cell shape","synonyms":[{"name":"viable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"viable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002104"}


id: PBO:0040646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 1B","termid":"PBO:0040646"}


id: PBO:0071191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 32","termid":"PBO:0071191"}


id: PBO:0091254
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CHS3","termid":"PBO:0091254"}


id: PBO:0109403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 30, pseudogene","termid":"PBO:0109403"}


id: GO:0044643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in positive regulation of complement activation, alternative pathway in another organism (obsolete GO:0044643)","synonyms":[{"name":"envenomation resulting in positive regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044643"}


id: PBO:0073091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C","termid":"PBO:0073091"}


id: SO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non directional promoter motif with consensus CGMYGYCR.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDM2_motif","synonyms":[{"name":"NDM2","type":"exact"},{"name":"NDM2 motif","type":"exact"},{"name":"non directional promoter motif 2","type":"exact"}],"termid":"SO:0001167"}


id: PBO:0073450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 5","termid":"PBO:0073450"}


id: GO:0051641
data:
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id: FYPO:0006110
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the silent mating-type cassettes are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:28404620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased silent mating-type cassette transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to silent mating-type cassette","type":"related"},{"name":"increased accumulation of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased level of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased mating-type region heterochromatin transcript-derived siRNA level","type":"exact"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"increased silent mating-type region transcript-derived siRNA level","type":"exact"}],"termid":"FYPO:0006110"}


id: PBO:0073138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B, vesicle trafficking protein","termid":"PBO:0073138"}


id: PBO:0062718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily P member 1 pseudogene","termid":"PBO:0062718"}


id: GO:0035649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that functions in transcription termination of RNA polymerase II transcribed non-coding RNAs. This complex interacts with the carboxy-terminal domain (CTD) of PolII and the terminator sequences in the nascent RNA transcript. In yeast this complex consists of Nrd1p, Nab3p, and Sen1p.","definition_xrefs":["PMID:21084293","PMID:16427013","PMID:10655211","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nrd1 complex","termid":"GO:0035649"}


id: PBO:0066914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 216","termid":"PBO:0066914"}


id: SO:0001984
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array that corresponds to a silenced version of a mating type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_array","termid":"SO:0005854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mating_type_cassette_array","synonyms":[{"name":"silent mating-type cassette","type":"related"}],"termid":"SO:0001984"}


id: PBO:0068060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 365","termid":"PBO:0068060"}


id: GO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["ISBN:0395825172","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histamine metabolic process","synonyms":[{"name":"histamine metabolism","type":"exact"}],"termid":"GO:0001692"}


id: PBO:0063128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 12","termid":"PBO:0063128"}


id: PATO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fertile","termid":"PATO:0000955"}


id: PBO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 30","termid":"PBO:0060010"}


id: FYPO:0002849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved when the cell population has been in stationary phase and is then placed in conditions that allow recovery. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"curved cell during recovery from stationary phase","synonyms":[{"name":"comma-shaped cell during recovery from stationary phase","type":"exact"},{"name":"curved cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"curved cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002849"}


id: GO:0008684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = 2-oxopent-4-enoate + H2O.","definition_xrefs":["EC:4.2.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-oxopent-4-enoate hydratase activity","secondary_identifiers":["RHEA:22580","GO:0018821","MetaCyc:2-OXOPENT-4-ENOATE-HYDRATASE-RXN","UM-BBD_enzymeID:e0078"],"synonyms":[{"name":"2-keto-4-pentenoate (vinylpyruvate)hydratase activity","type":"related"},{"name":"2-keto-4-pentenoate hydratase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate hydro-lyase (2-oxopent-4-enoate-forming)","type":"related"},{"name":"4-hydroxy-2-oxopentanoate hydro-lyase activity","type":"related"},{"name":"OEH activity","type":"related"}],"termid":"GO:0008684"}


id: PBO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase Fcp1","termid":"PBO:0002736"}


id: GO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heart contraction that contributes to the acute phase response. The acute phase response occurs during the early phases of an infection and is marked by changes in the production of plasma proteins such as C-reactive protein.","definition_xrefs":["GOC:jal","PMID:15834430","PMID:15642986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"part_of","term_name":"acute-phase response","termid":"GO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart contraction involved in acute-phase response","synonyms":[{"name":"regulation of cardiac contraction during acute phase response","type":"related"},{"name":"regulation of heart contraction during acute phase response","type":"related"}],"termid":"GO:0002531"}


id: PBO:0034098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realized_in","termid":"PBO:0034098"}


id: PBO:0029676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_morphology_during_vegetative_growth","termid":"PBO:0029676"}


id: PBO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 52","termid":"PBO:0044363"}


id: GO:0009327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that possesses NAD(P)+ transhydrogenase (AB-specific) activity. Homodimeric, trimeric, and heterotetrameric complexes have been identified.","definition_xrefs":["BRENDA:1.6.1.2","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)+ transhydrogenase complex (AB-specific) (obsolete GO:0009327)","termid":"GO:0009327"}


id: FYPO:0001799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition during a cellular response to DNA damage.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during response to DNA damage","synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during DNA damage","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase during response to DNA damage","type":"related"},{"name":"mitotic G2 phase arrest during response to DNA damage","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during response to DNA damage","type":"exact"}],"termid":"FYPO:0001799"}


id: PBO:0083807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that interacts with proteasome components; has a potential role in proteasome substrate specificity; also copurifies with 66S pre-ribosomal particles","termid":"PBO:0083807"}


id: PBO:0039449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and LEM domain containing 2","termid":"PBO:0039449"}


id: GO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm in response to deprivation of glucose.","definition_xrefs":["GOC:al","PMID:3541942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucose starvation","termid":"GO:0042149"},{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus in response to glucose starvation","termid":"GO:0036279"}


id: GO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of metal ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete metal ion homeostasis (obsolete GO:0055065)","termid":"GO:0055065"}


id: PR:O74818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C337.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.07c","secondary_identifiers":["UniProtKB:O74818"],"synonyms":[{"name":"Spom972h-CPB1","type":"exact"}],"termid":"PR:O74818"}


id: PBO:0041482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 91","termid":"PBO:0041482"}


id: PBO:0073342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 4","termid":"PBO:0073342"}


id: GO:0047743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlordecone alcohol + NADP+ = chlordecone + H+ + NADPH.","definition_xrefs":["RHEA:14401","EC:1.1.1.225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chlordecone reductase activity","secondary_identifiers":["KEGG_REACTION:R03716","MetaCyc:CHLORDECONE-REDUCTASE-RXN"],"synonyms":[{"name":"CDR activity","type":"related"},{"name":"chlordecone-alcohol:NADP+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047743"}


id: PBO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak2","termid":"PBO:0002325"}


id: GO:0102660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoylshikimate + coenzyme A = caffeoyl-CoA + shikimate.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"caffeoyl-CoA:shikimate O-(hydroxycinnamoyl)transferase activity","secondary_identifiers":["MetaCyc:RXN-2621"],"termid":"GO:0102660"}


id: GO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular multi-enzyme complex containing up to 11 different enzymes aligned on a non-catalytic scaffolding glycoprotein. Functions to hydrolyze cellulose.","definition_xrefs":["PMID:15197390","GOC:jl","PMID:11601609","PMID:20373916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular non-membrane-bounded organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"cellulosome","secondary_identifiers":["Wikipedia:Cellulosome","GO:1990296"],"synonyms":[{"name":"scaffoldin complex","type":"narrow"}],"termid":"GO:0043263"}


id: PBO:0085910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; YMR114C is not an essential gene","termid":"PBO:0085910"}


id: PBO:0088681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein, splicing factor Spf31","termid":"PBO:0088681"}


id: PBO:0045586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 8","termid":"PBO:0045586"}


id: PBO:0071548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 13","termid":"PBO:0071548"}


id: SO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 17-28-nt, small interfering RNA derived from transcripts of repetitive elements.","definition_xrefs":["PMID:18032451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA","termid":"SO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rasiRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:rasiRNA","type":"exact"},{"name":"repeat associated small interfering RNA","type":"exact"}],"termid":"SO:0000454"}


id: FYPO:0000431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished fermentation","synonyms":[{"name":"abolished fermentation during mitotic cell cycle","type":"related"},{"name":"absent fermentative metabolism","type":"exact"},{"name":"fermentation abolished","type":"exact"},{"name":"fermentation abolished during vegetative growth","type":"exact"},{"name":"fermentative metabolism abolished","type":"exact"},{"name":"fermentative metabolism: absent","type":"related"}],"termid":"FYPO:0000431"}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: PR:Q0E7J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stn1 gene.","definition_xrefs":["UniProtKB:Q0E7J7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein stn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.12c","synonyms":[{"name":"Spom972h-stn1","type":"exact"}],"termid":"PR:Q0E7J7"}


id: FYPO:0002599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is abnormal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"abnormal histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002599"}


id: PBO:0076805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 2","termid":"PBO:0076805"}


id: GO:0044696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virus causes the death of daughter cells which do not contain its genes after host cell division, by a mechanism of post-segregational killing (PSK). The extrachromosomal viral DNA consist of two genes; the product of the second is long lived and toxic, while the product of the first is short lived and antagonizes the lethal action of the toxin. Daughter cells that do not contain the viral extrachromosomal element are killed by the long lived toxin, while daughter cells that do contain the viral extrachromosomal element are protected by the action of the short lived antitoxin it encodes.","definition_xrefs":["PMID:11222604","Wikipedia:Toxin-antitoxin_system","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing by symbiont of host cells","termid":"GO:0001907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by virus of host cell by post-segregational killing","synonyms":[{"name":"killing by virus of host cell by PSK","type":"exact"},{"name":"killing by virus of host cell by toxin-antitoxin system","type":"exact"}],"termid":"GO:0044696"}


id: FYPO:0001808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of adenine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal adenine import","termid":"FYPO:0001807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased adenine import","synonyms":[{"name":"decreased adenine import across plasma membrane","type":"exact"},{"name":"decreased adenine import during mitotic cell cycle","type":"related"},{"name":"decreased adenine import during vegetative growth","type":"exact"},{"name":"decreased adenine import into cell","type":"exact"},{"name":"decreased adenine uptake","type":"exact"},{"name":"reduced adenine import","type":"exact"}],"termid":"FYPO:0001808"}


id: PBO:0030259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_chloramphenicol","termid":"PBO:0030259"}


id: MOD:01050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridyl alanyl","termid":"MOD:01050"}


id: GO:1900796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terrequinone A.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:17704773","PMID:17291795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"terrequinone A biosynthetic process","secondary_identifiers":["GO:1900794"],"synonyms":[{"name":"terrequinone A anabolism","type":"exact"},{"name":"terrequinone A biosynthesis","type":"exact"},{"name":"terrequinone A formation","type":"exact"},{"name":"terrequinone A metabolic process","type":"broad"},{"name":"terrequinone A metabolism","type":"broad"},{"name":"terrequinone A synthesis","type":"exact"}],"termid":"GO:1900796"}


id: PBO:0025489
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA Like Protein","termid":"PBO:0025489"}


id: GO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to insulin-like growth factor-1 (IGF-1) and type I insulin-like growth factor receptor (IGF1R). IGF1R is a heterotetramer that consists of two alpha-subunits and two beta-subunits.","definition_xrefs":["GOC:BHF","GOC:ebc","PMID:19578119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-IGF-1-IGF1R complex","termid":"GO:0035867"}


id: SO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant found within only speficic populations.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population_specific_variant","synonyms":[{"name":"population specific variant","type":"exact"}],"termid":"SO:0001780"}


id: GO:0007503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fat body over time, from its formation to the mature structure. A fat body is an insect gland dorsal to the insect gut, with a function analogous to that of the vertebrate liver. It is a storage organ for fats, glycogen and protein and is a major site of intermediary metabolism.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat body development","termid":"GO:0007503"}


id: GO:0005249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic cation channel activity","termid":"GO:0022843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated potassium channel activity","secondary_identifiers":["Reactome:R-HSA-9667761","Reactome:R-HSA-9659554","Reactome:R-HSA-1296127"],"synonyms":[{"name":"voltage gated potassium channel activity","type":"exact"},{"name":"voltage-dependent potassium channel activity","type":"exact"},{"name":"voltage-gated potassium ion channel activity","type":"exact"},{"name":"voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:0005249"}


id: GO:0032118
data:
  {"annotated_genes":["SJAG_00368","SJAG_04143","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102026,106570],"is_not":false,"summary":null,"term":"GO:0032118"},{"annotations":[96952],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the horsetail-astral array, a structure of astral microtubules that emanates from the spindle pole body during meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"dynein-driven meiotic oscillatory nuclear movement","termid":"GO:0030989"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03073":null,"SJAG_04143":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049","GO:0006810","GO:0140013","GO:0000226"],"is_obsolete":false,"name":"horsetail-astral microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail-astral microtubule array organization","type":"exact"},{"name":"horsetail-astral microtubule organisation","type":"exact"},{"name":"horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"GO:0032118","terms_by_termid":{"GO:0032118":null,"GO:1903563":null}}


id: GO:2000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of thymocyte migration","termid":"GO:2000411"},{"relation_name":"is_a","term_name":"regulation of fibronectin-dependent thymocyte migration","termid":"GO:2000413"},{"relation_name":"negatively_regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"negative regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000414"}


id: GO:0003240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the conus arteriosus from unspecified parts. The conus arteriosus is a valved chamber with thick muscular walls stemming from the ventricle and connecting to the pulmonary trunk.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber formation","termid":"GO:0003207"},{"relation_name":"part_of","term_name":"conus arteriosus morphogenesis","termid":"GO:0003239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conus arteriosus formation","termid":"GO:0003240"}


id: GO:0033476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an a sugar or polyol through an ester bond.","definition_xrefs":["MetaCyc:PWY-1741","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid ester conjugate biosynthetic process","synonyms":[{"name":"IAA ester conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid ester conjugate anabolism","type":"exact"},{"name":"indoleacetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid ester conjugate formation","type":"exact"},{"name":"indoleacetic acid ester conjugate synthesis","type":"exact"}],"termid":"GO:0033476"}


id: GO:1902383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 11-oxo-beta-amyrin.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid biosynthetic process","termid":"GO:0019745"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"11-oxo-beta-amyrin metabolic process","termid":"GO:1902381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"11-oxo-beta-amyrin biosynthetic process","synonyms":[{"name":"11-oxo-beta-amyrin anabolism","type":"exact"},{"name":"11-oxo-beta-amyrin biosynthesis","type":"exact"},{"name":"11-oxo-beta-amyrin formation","type":"exact"},{"name":"11-oxo-beta-amyrin synthesis","type":"exact"}],"termid":"GO:1902383"}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: FYPO:0005148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is increased. The nuclear periphery is the portion of the nuclear lumen proximal to the inner nuclear membrane.","definition_xrefs":["PomBase:mah","GO:0034399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to nuclear periphery","synonyms":[{"name":"increased protein localisation to nuclear periphery","type":"exact"},{"name":"increased protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005148"}


id: PBO:0090943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2","termid":"PBO:0090943"}


id: PBO:0029126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0029126"}


id: PBO:0063804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA2 antisense RNA 1","termid":"PBO:0063804"}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: PBO:0034422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell_(obsolete_has_target_cell)","termid":"PBO:0034422"}


id: PBO:0029927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GMP_binding","termid":"PBO:0029927"}


id: PBO:0069996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1291, pseudogene","termid":"PBO:0069996"}


id: MOD:00657
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamate 5-methyl ester.","definition_xrefs":["RESID:AA0072#GLN","PubMed:16888","Unimod:528","PubMed:6300110"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"methylated glutamine","termid":"MOD:00659"},{"relation_name":"is_a","term_name":"deamidated and methyl esterified residue","termid":"MOD:01369"},{"relation_name":"is_a","term_name":"L-glutamic acid 5-methyl ester","termid":"MOD:01453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester (Gln)","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"Deamidation followed by a methylation","type":"related"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"MOD_RES Glutamate methyl ester (Gln)","type":"exact"},{"name":"Methyl+Deamidated","type":"related"},{"name":"O5MeGlu(Gln)","type":"exact"},{"name":"deamidated 5-methyl esterified glutamine","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"}],"termid":"MOD:00657"}


id: FYPO:0003794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell is normal (i.e. indistinguishable from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular glycerol level during cellular response to osmotic stress","synonyms":[{"name":"normal cellular glycerol accumulation during cellular response to osmotic stress","type":"related"},{"name":"normal cellular glycerol level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cellular glycerol level during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0003794"}


id: GO:0061419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061419)","termid":"GO:0061419"}


id: GO:1902218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:14569084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"}


id: GO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III, DNA polymerase epsilon, a 5'-3' exonuclease, and the SMC1 and SMC2 proteins, and is involved in recombinational repair of deletions and gaps in DNA.","definition_xrefs":["PMID:8670910","PMID:8392064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RC-1 DNA recombination complex","synonyms":[{"name":"DNA recombination complex RC-1","type":"exact"},{"name":"RC-1 complex (recombination complex 1)","type":"exact"}],"termid":"GO:0070467"}


id: GO:0080101
data:
  {"annotated_genes":["SJAG_00812"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104676],"is_not":false,"summary":null,"term":"GO:0080101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidyl-N-dimethylethanolamine = S-adenosyl-L-homocysteine + phosphatidylcholine.","definition_xrefs":["EC:2.1.1.71","PMID:19366698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphatidyl-N-dimethylethanolamine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:32739","MetaCyc:RXN4FS-2","KEGG_REACTION:R01320"],"termid":"GO:0080101","terms_by_termid":{"GO:0080101":null}}


id: PBO:0110873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, DDB1 and CUL4-associated factor Dca7, implicated in gene expression","termid":"PBO:0110873"}


id: GO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Covalent attachment of the ubiquitin-like protein NEDD8 (or equivalent protein) to another protein, as a part of NEDD8-dependant protein catabolism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein neddylation during NEDD8 class-dependent protein catabolic process (obsolete GO:0042798)","synonyms":[{"name":"protein neddylation during NEDD8 class-dependent protein breakdown","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolism","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein degradation","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolism","type":"exact"}],"termid":"GO:0042798"}


id: GO:0036351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of ubiquitin group at lysine 13 (H2A-K13) in metazoans, and at the equivalent residue in other organisms. Monoubiquitin is first attached to H2A-K13 and K63-linked ubiquitin chains are then extended from this monoubiquitin.","definition_xrefs":["PMID:22713238","PMID:22980979","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K13 ubiquitination (obsolete GO:0036351)","synonyms":[{"name":"histone H2A ubiquitination (H2A-K13)","type":"exact"}],"termid":"GO:0036351"}


id: GO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of L-glutamate import across plasma membrane","termid":"GO:0002037"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of glutamate uptake involved in transmission of nerve impulse","termid":"GO:0051946"},{"relation_name":"negatively_regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of glutamate reuptake","type":"exact"},{"name":"negative regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of glutamate uptake involved in conduction of nerve impulse","type":"related"}],"termid":"GO:0051948"}


id: GO:1904142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25675505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of carotenoid biosynthetic process","synonyms":[{"name":"down regulation of carotenoid anabolism","type":"exact"},{"name":"down regulation of carotenoid biosynthesis","type":"exact"},{"name":"down regulation of carotenoid biosynthetic process","type":"exact"},{"name":"down regulation of carotenoid formation","type":"exact"},{"name":"down regulation of carotenoid synthesis","type":"exact"},{"name":"down-regulation of carotenoid anabolism","type":"exact"},{"name":"down-regulation of carotenoid biosynthesis","type":"exact"},{"name":"down-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"down-regulation of carotenoid formation","type":"exact"},{"name":"down-regulation of carotenoid synthesis","type":"exact"},{"name":"downregulation of carotenoid anabolism","type":"exact"},{"name":"downregulation of carotenoid biosynthesis","type":"exact"},{"name":"downregulation of carotenoid biosynthetic process","type":"exact"},{"name":"downregulation of carotenoid formation","type":"exact"},{"name":"downregulation of carotenoid synthesis","type":"exact"},{"name":"inhibition of carotenoid anabolism","type":"narrow"},{"name":"inhibition of carotenoid biosynthesis","type":"narrow"},{"name":"inhibition of carotenoid biosynthetic process","type":"narrow"},{"name":"inhibition of carotenoid formation","type":"narrow"},{"name":"inhibition of carotenoid synthesis","type":"narrow"},{"name":"negative regulation of carotenoid anabolism","type":"exact"},{"name":"negative regulation of carotenoid biosynthesis","type":"exact"},{"name":"negative regulation of carotenoid formation","type":"exact"},{"name":"negative regulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904142"}


id: PBO:0083957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase); synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure","termid":"PBO:0083957"}


id: PBO:0077625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15C","termid":"PBO:0077625"}


id: PBO:0028541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_septum","termid":"PBO:0028541"}


id: PBO:0041014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 1","termid":"PBO:0041014"}


id: PR:O60072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activating signal cointegrator 1 complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11752:SF8","OMA:SCHPO03837","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.10c","secondary_identifiers":["UniProtKB:O60072"],"synonyms":[{"name":"Spom972h-ASCC3","type":"exact"},{"name":"meiotically up-regulated gene 81 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60072"}


id: PR:Q9P7W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.07","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1703.07","type":"exact"},{"name":"citrate cleavage enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7W3"}


id: PBO:0004838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med7","termid":"PBO:0004838"}


id: PBO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.-","termid":"PBO:0002100"}


id: PBO:0061936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 1","termid":"PBO:0061936"}


id: PBO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 4","termid":"PBO:0061431"}


id: PBO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps24","termid":"PBO:0002532"}


id: PBO:0085166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Octanoyl-CoA:ethanol acyltransferase; also functions as thioesterase; plays a minor role in medium-chain fatty acid ethyl ester biosynthesis; localizes to lipid particles and the mitochondrial outer membrane; EHT1 has a paralog, EEB1, that arose from the whole genome duplication","termid":"PBO:0085166"}


id: GO:0032509
data:
  {"annotated_genes":["SJAG_02349","SJAG_04822","SJAG_04070","SJAG_03511","SJAG_04024","SJAG_02234","SJAG_01981","SJAG_04912","SJAG_03756","SJAG_02912","SJAG_04349","SJAG_03892","SJAG_05303","SJAG_03250","SJAG_01586","SJAG_00416","SJAG_00900","SJAG_01242","SJAG_01686","SJAG_04554","SJAG_01281","SJAG_02584","SJAG_05207","SJAG_07012","SJAG_04047","SJAG_04936","SJAG_04643","SJAG_00821","SJAG_04489","SJAG_03783","SJAG_02117"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112748],"is_not":false,"summary":null,"term":"GO:0032509"},{"annotations":[77957,75286,94243,99611,74788,94422,98628,102551,105581,99213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[83741,96415,72081,93532,72965,87307,109999,83909,70791,104767,87173,76766,97621,71008,72103,101999,77281,91565,73154,77074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes or vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the target compartment.","definition_xrefs":["GOC:mah","PMID:16689637","PMID:12461556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"},{"relation_name":"is_a","term_name":"multivesicular body sorting pathway","termid":"GO:0071985"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01586":null,"SJAG_01686":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02349":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03511":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04554":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05303":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"endosome transport via multivesicular body sorting pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosome transport via MVB sorting pathway","type":"exact"}],"termid":"GO:0032509","terms_by_termid":{"GO:0032509":null,"GO:0032511":null,"GO:0043328":null}}


id: GO:0072219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortical collecting duct over time, from its formation to the mature structure. The metanephric cortical collecting duct is the portion of the metanephric collecting duct that resides in the renal cortex.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical collecting duct development","termid":"GO:0072059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortical collecting duct development","termid":"GO:0072219"}


id: PR:O74863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit trm82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.13","synonyms":[{"name":"Spom972h-SPCC18.13","type":"exact"},{"name":"transfer RNA methyltransferase 82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74863"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: FYPO:0007389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement in mitotic interphase takes place at an abnormal angle relative to the long axis of the cell. Normally, the SPB oscillation angle remains nearly parallel to the long axis.","definition_xrefs":["PMID:18495844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal angle of spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal angle of SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal angle of mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal angle of spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal angle of spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased angle of spindle pole body-led chromosome movement during mitotic interphase","type":"narrow"},{"name":"increased trajectory angle of SPB oscillation","type":"related"},{"name":"spindle pole body-led chromosome movement during mitotic interphase at abnormal angle","type":"exact"}],"termid":"FYPO:0007389"}


id: GO:0102816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-glucosyl-5-O-caffeoylglucoside = H+ + delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + UDP.","definition_xrefs":["EC:2.4.1.298","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-D-glucose:delphinidin 3-O-glucosyl-5-O-caffeoylglucoside -O-beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:35423","MetaCyc:RXN-8234"],"termid":"GO:0102816"}


id: GO:1903714
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98290,105399],"is_not":false,"summary":null,"term":"GO:1903714"}]},"cv_name":"biological_process","definition":"The directed movement of isoleucine across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:18503766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"isoleucine transport","termid":"GO:0015818"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"isoleucine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903714","terms_by_termid":{"GO:1903714":null}}


id: PBO:0076083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin 3","termid":"PBO:0076083"}


id: PBO:0048313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 24","termid":"PBO:0048313"}


id: PBO:0062370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 8 pseudogene","termid":"PBO:0062370"}


id: FYPO:0006764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the meiotic cell cycle DNA replication checkpoint is activated at a normal (i.e. indistinguishable from wild type) frequency, under conditions that cause checkpoint activation in wild-type cells. The meiotic DNA replication checkpoint delays the meiotic nuclear division until pre-meiotic DNA replication is complete.","definition_xrefs":["PMID:10521402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle checkpoint phenotype","termid":"FYPO:0005511"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"normal activation of meiotic cell cycle DNA replication checkpoint","synonyms":[{"name":"normal activation of meiotic DNA replication checkpoint","type":"exact"},{"name":"normal activation of meiotic G2/MI DNA replication checkpoint","type":"exact"},{"name":"normal meiotic DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0006764"}


id: FYPO:0003019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PomBase:mah","GO:0031952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein autophosphorylation during vegetative growth","synonyms":[{"name":"abnormal protein autophosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003019"}


id: PBO:0049641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 44","termid":"PBO:0049641"}


id: PBO:0078557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 45","termid":"PBO:0078557"}


id: PBO:0046867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas apoptotic inhibitory molecule","termid":"PBO:0046867"}


id: PBO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 10","termid":"PBO:0046568"}


id: GO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell proliferation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"glial cell proliferation","termid":"GO:0014009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell proliferation","termid":"GO:0060251"}


id: PBO:0078689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-2","termid":"PBO:0078689"}


id: GO:1904200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which iodide is transported across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:20392814","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transport","termid":"GO:0015705"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"iodide transmembrane transport","termid":"GO:1904200"}


id: PBO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 1","termid":"PBO:0047682"}


id: GO:0047223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP.","definition_xrefs":["EC:2.4.1.146","MetaCyc:2.4.1.146-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5617096","Reactome:R-HSA-5617037"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to -D-galactose of beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"elongation 3-beta-GalNAc-transferase activity","type":"related"},{"name":"elongation 3beta-GalNAc-transferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase (elongating)","type":"related"}],"termid":"GO:0047223"}


id: GO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7alpha-hydroxycholest-4-en-3-one + H+ + NADPH + O2 = 7alpha,12alpha-dihydroxycholest-4-en-3-one + H2O + NADP+.","definition_xrefs":["PMID:1400444","RHEA:46752","PMID:10051404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 12-alpha-hydroxylase activity","termid":"GO:0008397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"7alpha-hydroxycholest-4-en-3-one 12alpha-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R04826","MetaCyc:1.14.13.95-RXN","Reactome:R-HSA-193709","Reactome:R-HSA-193845","Reactome:R-HSA-192157"],"synonyms":[{"name":"7alpha-hydroxy-4-cholesten-3-one 12alpha-monooxygenase activity","type":"related"}],"termid":"GO:0033778"}


id: PBO:0067800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 102","termid":"PBO:0067800"}


id: FYPO:0006662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during G0 phase in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during G0","termid":"FYPO:0006667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"fragmented nucleus during G0","synonyms":[{"name":"degraded nucleus during cell quiescence","type":"related"},{"name":"fragmented nuclear DNA during G0","type":"related"},{"name":"fragmented nucleus during cell quiescence","type":"exact"},{"name":"fragmented nucleus during quiescence","type":"exact"},{"name":"loss of nuclear integrity during G0","type":"related"}],"termid":"FYPO:0006662"}


id: GO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of sodium excreted in urine over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of renal sodium excretion","termid":"GO:0035815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion by pressure natriuresis","synonyms":[{"name":"natriuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035819"}


id: PBO:0082199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082199"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: PATO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000116 relative temperature sensitivity (obsolete PATO:0000116)","termid":"PATO:0000116"}


id: GO:0045782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell budding","termid":"GO:0007116"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell budding","synonyms":[{"name":"activation of cell budding","type":"narrow"},{"name":"positive regulation of budding","type":"broad"},{"name":"stimulation of cell budding","type":"narrow"},{"name":"up regulation of cell budding","type":"exact"},{"name":"up-regulation of cell budding","type":"exact"},{"name":"upregulation of cell budding","type":"exact"}],"termid":"GO:0045782"}


id: PBO:0077391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 131","termid":"PBO:0077391"}


id: GO:2000923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"positive regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000923"}


id: GO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen samples carried out by M cells in the mucosal-associated lymphoid tissue.","definition_xrefs":["GOC:jal","PMID:11896763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen sampling in mucosal-associated lymphoid tissue","termid":"GO:0002404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling by M cells in MALT","type":"exact"}],"termid":"GO:0002406"}


id: PBO:0029302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall","termid":"PBO:0029302"}


id: PBO:0043637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinator of PRMT5 and differentiation stimulator","termid":"PBO:0043637"}


id: MOD:01771
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:15609361","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: FYPO:0002787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles","synonyms":[{"name":"decreased vacuole size","type":"exact"},{"name":"reduced vacuole size","type":"exact"}],"termid":"FYPO:0002787"}


