# terms

id: PBO:0053241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 5","termid":"PBO:0053241"}


id: PBO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 3","termid":"PBO:0052199"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: PBO:0061804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 3B","termid":"PBO:0061804"}


id: PBO:0077342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 81","termid":"PBO:0077342"}


id: GO:1905335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aggrephagy.","definition_xrefs":["PMID:25686248","GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of aggrephagy","termid":"GO:1905335"}


id: PBO:0071543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 8","termid":"PBO:0071543"}


id: GO:0003029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003029"}


id: GO:0042181
data:
  {"annotated_genes":["SJAG_04642","SJAG_01668","SJAG_04568","SJAG_01672","SJAG_01820","SJAG_00933","SJAG_04223","SJAG_06603","SJAG_00721","SJAG_00459","SJAG_01866","SJAG_01043","SJAG_01865","SJAG_01911","SJAG_04000","SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010236"},{"annotations":[85054],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[73591,77379,73555,106144,111872,72586,85504,73403,83515,115952,111514,99231,115953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[104599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032194"},{"annotations":[112548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01063":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_01911":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketone biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:29191091":null},"synonyms":[{"name":"ketone anabolism","type":"exact"},{"name":"ketone biosynthesis","type":"exact"},{"name":"ketone formation","type":"exact"},{"name":"ketone synthesis","type":"exact"}],"termid":"GO:0042181","terms_by_termid":{"GO:0006744":null,"GO:0010236":null,"GO:0032194":null,"GO:1901006":null,"GO:1904775":null}}


id: GO:0018755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + OH- = 2,4-dihydroxy-6-amino-1,3,5-triazine + Cl-.","definition_xrefs":["UM-BBD_reactionID:r1414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity","termid":"GO:0018755"}


id: PBO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing defective protein Sde2","termid":"PBO:0001846"}


id: PBO:0017479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within","termid":"PBO:0017479"}


id: PBO:0087029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L14A; N-terminally acetylated; homologous to mammalian ribosomal protein L14, no bacterial homolog; RPL14A has a paralog, RPL14B, that arose from the whole genome duplication","termid":"PBO:0087029"}


id: PBO:0029636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_stubby_vegetative_cell","termid":"PBO:0029636"}


id: PBO:0083572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF RRP9","termid":"PBO:0083572"}


id: PBO:0059857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase domain containing","termid":"PBO:0059857"}


id: FYPO:0005649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to telomere","synonyms":[{"name":"increased duration of protein localisation to telomere","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region","type":"exact"},{"name":"increased duration of protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to telomere during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomeric region","type":"exact"},{"name":"prolonged protein localization to telomere","type":"exact"}],"termid":"FYPO:0005649"}


id: PBO:0038978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylhydrolase like 1","termid":"PBO:0038978"}


id: SO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop portion of a stem loop, which is not folded back upon itself. ","direct_ancestors":[{"relation_name":"is_a","term_name":"stem_loop_region","termid":"SO:0002253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loop","synonyms":[{"name":"loop portion of stem loop","type":"exact"}],"termid":"SO:0002254"}


id: PR:Q9USP2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ynd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apyrase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.05c","synonyms":[{"name":"ADPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-diphosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Golgi nucleoside diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ynd1","type":"exact"},{"name":"adenosine diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP2"}


id: PR:O94407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec65 gene.","definition_xrefs":["UniProtKB:O94407","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle sec65 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.15c","synonyms":[{"name":"Spom972h-sec65","type":"exact"}],"termid":"PR:O94407"}


id: GO:0021653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 1. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 1 morphogenesis","termid":"GO:0021651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 1 structural organization","synonyms":[{"name":"rhombomere 1 structural organisation","type":"exact"}],"termid":"GO:0021653"}


id: PBO:0067150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 200, pseudogene","termid":"PBO:0067150"}


id: GO:0006417
data:
  {"annotated_genes":["SJAG_01517","SJAG_01436","SJAG_04959","SJAG_05000","SJAG_02189","SJAG_02638","SJAG_04130","SJAG_02026","SJAG_00169","SJAG_01942","SJAG_03550","SJAG_00690","SJAG_00251","SJAG_16454","SJAG_00579","SJAG_02072","SJAG_04291","SJAG_04383","SJAG_01079","SJAG_04159","SJAG_03677","SJAG_04890","SJAG_03869","SJAG_00642","SJAG_04085","SJAG_04312","SJAG_02723","SJAG_00786","SJAG_02043","SJAG_00423","SJAG_02592","SJAG_05265","SJAG_04873","SJAG_02467","SJAG_03501","SJAG_02285","SJAG_01047","SJAG_01249","SJAG_04544","SJAG_01058","SJAG_00600","SJAG_04756","SJAG_04452","SJAG_00892","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95633,91684,114933,98099,111497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[87221,108702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[70093,72198,88841,90419,112283,95526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[103036,113835,69935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[109228,94876,98165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[96672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[66683,68628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[72477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[68629,90871,66684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[113530,114163,106169,108944,98843,96476,96937,101593,92320,92182,107665,86165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000765"},{"annotations":[91558,110610,105945,106621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[91305,100282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[99619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006446"},{"annotations":[99379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[108239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00251":null,"SJAG_00423":null,"SJAG_00579":null,"SJAG_00600":null,"SJAG_00642":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00892":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01079":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01517":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02072":null,"SJAG_02189":null,"SJAG_02285":null,"SJAG_02467":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03501":null,"SJAG_03550":null,"SJAG_03677":null,"SJAG_03869":null,"SJAG_04085":null,"SJAG_04130":null,"SJAG_04159":null,"SJAG_04291":null,"SJAG_04312":null,"SJAG_04383":null,"SJAG_04452":null,"SJAG_04544":null,"SJAG_04756":null,"SJAG_04873":null,"SJAG_04890":null,"SJAG_04959":null,"SJAG_05000":null,"SJAG_05265":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006445"],"synonyms":[{"name":"regulation of protein anabolism","type":"exact"},{"name":"regulation of protein biosynthesis","type":"exact"},{"name":"regulation of protein formation","type":"exact"},{"name":"regulation of protein synthesis","type":"exact"}],"termid":"GO:0006417","terms_by_termid":{"GO:0006446":null,"GO:0006449":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:0140018":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null}}


id: PBO:0073102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 6","termid":"PBO:0073102"}


id: PBO:0110361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC2 pseudogene 1","termid":"PBO:0110361"}


id: GO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"}


id: PBO:0079857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B6 (pseudogene)","termid":"PBO:0079857"}


id: GO:1902484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a Sertoli cell.","definition_xrefs":["PMID:17761895","GOC:ic","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell apoptotic process","synonyms":[{"name":"Sertoli cell apoptosis","type":"narrow"}],"termid":"GO:1902484"}


id: PBO:0031417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_adhesion_during_vegetative_growth","termid":"PBO:0031417"}


id: PBO:0042318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD37 molecule","termid":"PBO:0042318"}


id: GO:0060266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"negative regulation of respiratory burst","termid":"GO:0060268"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"negatively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"negative regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060266"}


id: GO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the stable binding of a haptoglobin to hemoglobin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"haptoglobin-hemoglobin complex","termid":"GO:0031838"}


id: GO:0038148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","Wikipedia:CCL2","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 2 signaling pathway","synonyms":[{"name":"CCL2 signaling pathway","type":"exact"}],"termid":"GO:0038148"}


id: GO:0007091
data:
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id: PBO:0030080
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id: PBO:0039344
data:
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id: PATO:0000844
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id: SO:0100018
data:
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id: GO:0006518
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id: GO:0043618
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id: _global:has_cross_section
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id: PBO:0039625
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id: PBO:0067414
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id: PBO:0030960
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id: GO:0016759
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id: PBO:0084649
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id: GO:1903127
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id: PBO:0064326
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id: GO:0010599
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id: PBO:0061460
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOTCH regulated ankyrin repeat protein","termid":"PBO:0061460"}


id: GO:0047056
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-tetrahydrocolumbamine + [reduced NADPH--hemoprotein reductase] + O2 -> (S)-canadine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:21456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(S)-canadine synthase activity","secondary_identifiers":["EC:1.14.19.68","KEGG_REACTION:R04400","MetaCyc:1.1.3.36-RXN"],"synonyms":[{"name":"(S)-tetrahydroberberine synthase activity","type":"related"},{"name":"(S)-tetrahydrocolumbamine oxidase (methylenedioxy-bridge-forming) activity","type":"related"}],"termid":"GO:0047056"}


id: PBO:0079079
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-7","termid":"PBO:0079079"}


id: PR:O43026
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.12","synonyms":[{"name":"GAPDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd3","type":"exact"}],"termid":"PR:O43026"}


id: GO:0120102
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id: PBO:0039089
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id: GO:0009059
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activity, transferring alkyl or aryl (other than methyl) groups","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["EC:2.5.1.-","GO:0016766","Reactome:R-HSA-4419978","Reactome:R-HSA-4755545","Reactome:R-HSA-6782893","Reactome:R-HSA-3159253"],"synonyms":[{"name":"transferase activity, transferring alkyl or aryl groups, other than methyl groups","type":"exact"}],"termid":"GO:0016765","terms_by_termid":{"GO:0000906":null,"GO:0002083":null,"GO:0002094":null,"GO:0003849":null,"GO:0003866":null,"GO:0003961":null,"GO:0003962":null,"GO:0004124":null,"GO:0004156":null,"GO:0004161":null,"GO:0004310":null,"GO:0004311":null,"GO:0004337":null,"GO:0004364":null,"GO:0004418":null,"GO:0004478":null,"GO:0004660":null,"GO:0004662":null,"GO:0004663":null,"GO:0004746":null,"GO:0004766":null,"GO:0004789":null,"GO:0006743":null,"GO:0006744":null,"GO:0008412":null,"GO:0008495":null,"GO:0009824":null,"GO:0034038":null,"GO:0045547":null,"GO:0047293":null,"GO:0051996":null,"GO:0052381":null,"GO:0090560":null,"GO:0097269":null,"GO:0102028":null,"GO:0102522":null,"GO:0106388":null}}


id: PBO:0009146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-dependent serine/threonine protein phosphatase calcineurin A, catalytic subunit Ppb1","termid":"PBO:0009146"}


id: SO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primary transcript region bordering trans-splice junction.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_site","synonyms":[{"name":"trans splice site","type":"exact"}],"termid":"SO:0001420"}


id: PBO:0031501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: GO:0043783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and flavin acts as an electron acceptor.","definition_xrefs":["EC:1.16.8.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, flavin as acceptor","synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions with flavin as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, flavin as acceptor","type":"related"}],"termid":"GO:0043783"}


id: PBO:0056634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13","termid":"PBO:0056634"}


id: GO:0071740
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgD immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:11282392","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"IgD B cell receptor complex","synonyms":[{"name":"membrane-bound IgD","type":"exact"},{"name":"surface IgD","type":"exact"}],"termid":"GO:0071740"}


id: PBO:0062053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 1","termid":"PBO:0062053"}


id: PBO:0029633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_cell_growth","termid":"PBO:0029633"}


id: PBO:0086803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL057W is not an essential gene","termid":"PBO:0086803"}


id: PBO:0077178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 2","termid":"PBO:0077178"}


id: PBO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAD16","termid":"PBO:0012599"}


id: PBO:0079054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 10-1","termid":"PBO:0079054"}


id: PBO:0068591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 42, pseudogene","termid":"PBO:0068591"}


id: GO:0015393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil/uridine permease activity (obsolete GO:0015393)","synonyms":[{"name":"uracil/uridine permease activity","type":"exact"}],"termid":"GO:0015393"}


id: PBO:0108951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 3","termid":"PBO:0108951"}


id: PBO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 41","termid":"PBO:0060053"}


id: GO:0075520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, within the host cell cytoplasm via the host's actin filaments. Actin-dependent transport is induced by viral proteins that interact with actin and/or host cell motor proteins like myosins or that promotes actin polymerization/depolymerization reactions.","definition_xrefs":["VZ:991","UniProtKB-KW:KW-1178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-dependent intracellular transport of virus","synonyms":[{"name":"actin-dependent intracellular transport of viral material","type":"exact"}],"termid":"GO:0075520"}


id: GO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075080)","termid":"GO:0075080"}


id: GO:0004364
data:
  {"annotated_genes":["SJAG_03863","SJAG_05181","SJAG_00179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95469,110502,115459],"is_not":false,"summary":null,"term":"GO:0004364"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group.","definition_xrefs":["EC:2.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00179":null,"SJAG_03863":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"glutathione transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GSHTRAN-RXN","Reactome:R-HSA-5423653","Reactome:R-HSA-9026780","Reactome:R-HSA-9748996","Reactome:R-HSA-9026777","Reactome:R-HSA-9026911","Reactome:R-HSA-3301943","Reactome:R-HSA-176054","Reactome:R-HSA-9026901","Reactome:R-HSA-9753280","Reactome:R-HSA-176059"],"synonyms":[{"name":"RX:glutathione R-transferase activity","type":"related"},{"name":"S-(hydroxyalkyl)glutathione lyase activity","type":"related"},{"name":"glutathione S-alkyl transferase activity","type":"related"},{"name":"glutathione S-alkyltransferase activity","type":"related"},{"name":"glutathione S-aralkyltransferase activity","type":"related"},{"name":"glutathione S-aryltransferase activity","type":"related"},{"name":"glutathione S-transferase activity","type":"related"},{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0004364","terms_by_termid":{"GO:0004364":null}}


id: PBO:0028534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized,_misoriented_septum","termid":"PBO:0028534"}


id: PBO:0079533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor 2","termid":"PBO:0079533"}


id: PBO:0064974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 30, pseudogene","termid":"PBO:0064974"}


id: PBO:0073832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 8","termid":"PBO:0073832"}


id: SO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Transcription pause sites are regions of a gene where RNA polymerase may pause during transcription. The functional role of pausing may be to facilitate factor recruitment, RNA folding, and synchronization with translation. Consensus transcription pause site have been observed in E. coli.","definition_xrefs":["PMID:24789973","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_pause_site","synonyms":[{"name":"transcription pause site","type":"exact"}],"termid":"SO:0002047"}


id: PR:Q9P6I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc16 gene.","definition_xrefs":["UniProtKB:Q9P6I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.09","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc16","type":"exact"},{"name":"ubiquitin carrier protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I1"}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: GO:0052731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline phosphate + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphocholine phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1483159","MetaCyc:RXN-5647","RHEA:10492","KEGG_REACTION:R06871"],"synonyms":[{"name":"3X11A","type":"related"},{"name":"PHOSPHO1","type":"related"},{"name":"phosphoethanolamine phosphohydrolase activity","type":"related"}],"termid":"GO:0052731"}


id: PBO:0062463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 154 pseudogene","termid":"PBO:0062463"}


id: PBO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily D member 1 pseudogene","termid":"PBO:0062069"}


id: GO:2001274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of glucose import in response to insulin stimulus (obsolete GO:2001274)","synonyms":[{"name":"negative regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001274"}


id: PR:O59722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fab1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 3-phosphate 5-kinase fab1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.01","synonyms":[{"name":"PIPkin-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fab1","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylinositol 3-phosphate 5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type III PIP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59722"}


id: PBO:0038295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0038295"}


id: PBO:0013117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, localizing to double strand breaks Dbl6","termid":"PBO:0013117"}


id: PBO:0046396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 2","termid":"PBO:0046396"}


id: FYPO:0005847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of H3-K9 specific histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone methyltransferase activity","termid":"FYPO:0004784"},{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity (H3-K9 specific) activity","termid":"FYPO:0005846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0005447","FYPO:0000641","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased histone methyltransferase activity (H3-K9 specific) activity","synonyms":[{"name":"decreased H3-K9 specific histone methyltransferase activity","type":"exact"},{"name":"reduced histone methyltransferase activity (H3-K9 specific) activity","type":"exact"}],"termid":"FYPO:0005847"}


id: GO:0047406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-D-glucosamine + L-asparagine.","definition_xrefs":["EC:3.2.2.11","RHEA:12324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-aspartyl-N-acetylglucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R01266","MetaCyc:3.2.2.11-RXN"],"synonyms":[{"name":"1-beta-aspartyl-N-acetyl-D-glucosaminylamine L-asparaginohydrolase activity","type":"related"},{"name":"beta-aspartylacetylglucosaminidase activity","type":"related"}],"termid":"GO:0047406"}


id: PBO:0044014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 pseudogene 3","termid":"PBO:0044014"}


id: PBO:0080476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 1-2","termid":"PBO:0080476"}


id: GO:0034283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-alpha-copalyl diphosphate = stemod-13(17)-ene + diphosphate.","definition_xrefs":["RHEA:25556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"syn-stemod-13(17)-ene synthase activity","secondary_identifiers":["KEGG_REACTION:R09116","EC:4.2.3.34","MetaCyc:RXN-9291"],"synonyms":[{"name":"9alpha-copalyl-diphosphate diphosphate-lyase [stemod-13(17)-ene-forming] activity","type":"exact"},{"name":"exo-stemodene synthase activity","type":"exact"},{"name":"stemod-13(17)-ene synthase activity","type":"exact"},{"name":"stemodene synthase activity","type":"exact"},{"name":"syn-stemodene synthase activity","type":"exact"}],"termid":"GO:0034283"}


id: PR:O13817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec73 gene.","definition_xrefs":["UniProtKB:O13817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.01c","synonyms":[{"name":"Spom972h-sec73","type":"exact"}],"termid":"PR:O13817"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: PBO:0029400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm","termid":"PBO:0029400"}


id: GO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3-hydroxyphenyl)propionate + NADH + oxygen + H+ = 3-(2,3-dihydroxyphenyl)propionate + NAD+ + H2O.","definition_xrefs":["RHEA:24785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propionate hydroxylase activity","secondary_identifiers":["EC:1.14.13.127","KEGG_REACTION:R06786","MetaCyc:MHPHYDROXY-RXN"],"termid":"GO:0008688"}


id: PBO:0057990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3914-2","termid":"PBO:0057990"}


id: PBO:0050310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 12","termid":"PBO:0050310"}


id: PBO:0074203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A12 antisense RNA 1","termid":"PBO:0074203"}


id: GO:0097278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell killing caused by the membrane attack complex formed following complement activation.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement-dependent cytotoxicity","termid":"GO:0097278"}


id: PR:000050531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00083.","definition_xrefs":["PMID:22150589","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me3:(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00083","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me3:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00083","type":"broad"},{"name":"hhf1/Me3:(K20)","type":"exact"},{"name":"histone H4 K20me3 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050531"}


id: PBO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 1","termid":"PBO:0039638"}


id: PBO:0027786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_nitrogen_starvation","termid":"PBO:0027786"}


id: GO:0102630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-pentahydroxy-8-methoxyflavon-3-olate + S-adenosyl-L-methionine = gossypetin 3',8-dimethyl ether + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"gossypetin 8-methyl ester 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15536"],"termid":"GO:0102630"}


id: PBO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Csx1","termid":"PBO:0002119"}


id: PBO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-cap methyltransferase Pcm1","termid":"PBO:0005016"}


id: GO:0015210
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of uracil, 2,4-dioxopyrimidine, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"uracil transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil/uridine permease activity","type":"related"}],"termid":"GO:0015210","terms_by_termid":{"GO:0015505":null}}


id: PBO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 1","termid":"PBO:0047732"}


id: PBO:0068100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 407","termid":"PBO:0068100"}


id: GO:0046309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 1,3-dichloro-2-propanol (DCP), a halohydrin suspected of being carcinogenic, mutagenic and genotoxic.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3-dichloro-2-propanol biosynthetic process (obsolete GO:0046309)","synonyms":[{"name":"1,3-dichloro-2-propanol anabolism","type":"exact"},{"name":"1,3-dichloro-2-propanol biosynthesis","type":"exact"},{"name":"1,3-dichloro-2-propanol formation","type":"exact"},{"name":"1,3-dichloro-2-propanol synthesis","type":"exact"}],"termid":"GO:0046309"}


id: GO:0036431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dCMP = ADP + dCDP.","definition_xrefs":["RHEA:25094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylate kinase activity","termid":"GO:0004127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"dCMP kinase activity","secondary_identifiers":["KEGG_REACTION:R01665","MetaCyc:RXN-7913"],"synonyms":[{"name":"ATP:dCMP phosphotransferase activity","type":"exact"}],"termid":"GO:0036431"}


id: PBO:0054332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1725","termid":"PBO:0054332"}


id: GO:0102973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 malonyl-CoA + 5 H+ + a hexanoyl-[acyl-carrier-protein] = norsolorinate anthrone + 7 coenzyme A + 7 carbon dioxide + 2 H2O + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.221","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"norsolorinate anthrone synthase activity","secondary_identifiers":["RHEA:35179","MetaCyc:RXN-9479"],"synonyms":[{"name":"norsolorinic acid synthase","type":"exact"}],"termid":"GO:0102973"}


id: MOD:02044
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-cysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-cysteine residue","synonyms":[{"name":"XlnkCys","type":"exact"}],"termid":"MOD:02044"}


id: PBO:0089392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synembryn family GEF, Ric8","termid":"PBO:0089392"}


id: PR:O94720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain-containing protein C1393.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.08","synonyms":[{"name":"Spom972h-SPCC1393.08","type":"exact"}],"termid":"PR:O94720"}


id: GO:0099148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle docking.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"regulates","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle docking","termid":"GO:0099148"}


id: GO:0021659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 3. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 structural organization","synonyms":[{"name":"rhombomere 3 structural organisation","type":"exact"}],"termid":"GO:0021659"}


id: PBO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 6","termid":"PBO:0047789"}


id: PBO:0039402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 2","termid":"PBO:0039402"}


id: GO:0060316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051281"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060316"}


id: GO:0003269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in regulation of secondary heart field cardioblast proliferation (obsolete GO:0003269)","synonyms":[{"name":"BMP signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"BMP signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003269"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: GO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+.","definition_xrefs":["EC:1.1.1.271","MetaCyc:1.1.1.271-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"GDP-L-fucose synthase activity","secondary_identifiers":["Reactome:R-HSA-6787642","RHEA:18885"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity","type":"related"},{"name":"GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)","type":"related"},{"name":"GDP-fucose synthetase activity","type":"related"}],"termid":"GO:0050577"}


id: PBO:0054782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2195","termid":"PBO:0054782"}


id: FYPO:0003102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0003102"}


id: PBO:0064714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 50","termid":"PBO:0064714"}


id: PBO:0080496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor D and EGF domains","termid":"PBO:0080496"}


id: PBO:0074831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 27","termid":"PBO:0074831"}


id: PBO:0079900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit XI","termid":"PBO:0079900"}


id: GO:1902795
data:
  {"annotated_genes":["SJAG_01331"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102681],"is_not":false,"summary":null,"term":"GO:1902795"}]},"cv_name":"biological_process","definition":"The formation of facultative heterochromatin into a heterochromatin domain, enriched in histone H3 methylated on lysine 9 (H3K9me), by a process mediated by a small interfering RNA.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:24210919","PMID:23151475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"},{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"siRNA-mediated facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HOOD assembly","type":"exact"},{"name":"HOOD formation","type":"exact"},{"name":"heterochromatin domain assembly","type":"exact"},{"name":"heterochromatin domain formation","type":"exact"},{"name":"siRNA-dependent facultative heterochromatin assembly","type":"exact"},{"name":"siRNA-dependent facultative heterochromatin formation","type":"exact"}],"termid":"GO:1902795","terms_by_termid":{"GO:1902795":null}}


id: FYPO:0005833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"},{"relation_name":"is_a","term_name":"decreased protein transport along microtubule during vegetative growth","termid":"FYPO:0005494"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein transport during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005833"}


id: PBO:0047364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 18","termid":"PBO:0047364"}


id: PBO:0035883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ophthalmic_acid_absent_from_cell","termid":"PBO:0035883"}


id: GO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + laricitrin = S-adenosyl-L-homocysteine + syringetin.","definition_xrefs":["RHEA:25633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"laricitrin 5'-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.267","KEGG_REACTION:R06816","MetaCyc:RXN-8452"],"synonyms":[{"name":"CrCOMT2","type":"related"},{"name":"S-adenosyl-L-methionine:myricetin O-methyltransferase activity","type":"related"},{"name":"flavonoid 3',5'-O-dimethyltransferase activity","type":"related"}],"termid":"GO:0070448"}


id: PBO:0045537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase 1","termid":"PBO:0045537"}


id: PATO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000990 consistent (obsolete PATO:0000990)","termid":"PATO:0000990"}


id: GO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development in other organism during symbiotic interaction (obsolete GO:0051831)","synonyms":[{"name":"growth or development in other organism during symbiotic interaction","type":"exact"},{"name":"growth or development within other organism during symbiotic interaction","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0051831"}


id: PBO:0080698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 4","termid":"PBO:0080698"}


id: GO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"regulation of lateral mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048374"}


id: PBO:0011988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YPR127W date=19700101","termid":"PBO:0011988"}


id: GO:0060066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of an oviduct over time, from its formation to the mature structure. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct development","synonyms":[{"name":"fallopian tube development","type":"narrow"},{"name":"Mullerian tract development","type":"related"}],"termid":"GO:0060066"}


id: PBO:0084332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-like myosin passenger-protein; interacts with Myo2p and enhances its interaction with Sec4p during transport of secretory vesicles; controls actin cable structure and dynamics","termid":"PBO:0084332"}


id: PBO:0060151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational release factor 1 like pseudogene 2","termid":"PBO:0060151"}


id: GO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism decreases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["PMID:19837656","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of blood pressure in another organism","termid":"GO:0044495"},{"relation_name":"is_a","term_name":"negative regulation of blood pressure","termid":"GO:0045776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure in another organism","synonyms":[{"name":"negative regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044496"}


id: PBO:0058033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4254","termid":"PBO:0058033"}


id: PBO:0084959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND domain-containing protein; component of the Mub1p-Ubr2p-Rad6p ubiquitin ligase complex, required for ubiquitination and degradation of Rpn4p; interacts with Ubr2p (E3) and indirectly with Rad6p (E2); short-lived protein degraded in a Ubr2p/Rad6p dependent manner; proposed to function as both a partner and substrate of the Ubr2p/Rad6p ubiquitin ligase; similar to the A. nidulans samB gene","termid":"PBO:0084959"}


id: MOD:01067
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linker attached to peptide in Fmoc peptide synthesis","termid":"MOD:01067"}


id: GO:0048706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb","PMID:16049113","GOC:jid","GOC:dph","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system development","termid":"GO:0001501"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal system development","synonyms":[{"name":"embryonic skeletal development","type":"exact"}],"termid":"GO:0048706"}


id: PBO:0029616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029616"}


id: PBO:0090558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit","termid":"PBO:0090558"}


id: PBO:0034067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-role_of","termid":"PBO:0034067"}


id: GO:0044597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving daunorubicin, a chemotherapeutic of the anthracycline family that is given as a treatment for some types of cancer.","definition_xrefs":["PMID:20837989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"daunorubicin metabolic process","termid":"GO:0044597"}


id: PR:Q9UUG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUG3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.05c","synonyms":[{"name":"Spom972h-dph4","type":"exact"}],"termid":"PR:Q9UUG3"}


id: GO:0050372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: n ATP + calmodulin + n ubiquitin = n AMP + n diphosphate + ubiquitin(n)-calmodulin.","definition_xrefs":["MetaCyc:UBIQUITIN--CALMODULIN-LIGASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-calmodulin ligase activity (obsolete GO:0050372)","synonyms":[{"name":"calmodulin:ubiquitin ligase (AMP-forming)","type":"related"},{"name":"uCaM-synthetase activity","type":"related"},{"name":"ubiquitin-calmodulin synthetase activity","type":"related"},{"name":"ubiquityl-calmodulin synthase activity","type":"related"},{"name":"ubiquityl-calmodulin synthetase activity","type":"related"}],"termid":"GO:0050372"}


id: FYECO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiamine","termid":"FYECO:0000106"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-pinene monooxygenase [NADH] activity","secondary_identifiers":["EC:1.14.13.155","UM-BBD_reactionID:r0742"],"termid":"GO:0018634"}


id: PBO:0069967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1262, pseudogene","termid":"PBO:0069967"}


id: GO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing guanine = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine.","definition_xrefs":["EC:2.1.1.32"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (guanine-N2-)-methyltransferase activity (obsolete GO:0004809)","synonyms":[{"name":"N(2),N(2)-dimethylguanine tRNA methyltransferase activity","type":"related"},{"name":"N2,N2-dimethylguanine tRNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"guanine-N2-methylase activity","type":"related"},{"name":"transfer ribonucleate guanine 2-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate guanine N2-methyltransferase activity","type":"related"}],"termid":"GO:0004809"}


id: GO:0042328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"heparan sulfate N-acetylglucosaminyltransferase activity","synonyms":[{"name":"heparan sulphate N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"heparin N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0042328"}


id: PBO:0027068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_metabolic_process","termid":"PBO:0027068"}


id: PBO:0080520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 2, pseudogene","termid":"PBO:0080520"}


id: GO:0071279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cobalt ion","termid":"GO:0032025"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cobalt ion","termid":"GO:0071279"}


id: PBO:0064922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 4","termid":"PBO:0064922"}


id: PBO:0088992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C PHD finger subunit Spf1","termid":"PBO:0088992"}


id: PBO:0089441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalamin (vitamin B12) biosynthesis CobW-like protein","termid":"PBO:0089441"}


id: PBO:0027630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere","termid":"PBO:0027630"}


id: GO:1900530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of cell shape that is involved in cellular response to salt stress.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:9135147"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell shape involved in cellular response to salt stress (obsolete GO:1900530)","synonyms":[{"name":"regulation of cell shape involved in cellular response to salt stress","type":"exact"},{"name":"regulation of cell shape of cellular response to ionic osmotic stress","type":"exact"},{"name":"regulation of cell shape of cellular response to salt stress","type":"exact"},{"name":"regulation of cell shape of cellular salinity response","type":"exact"}],"termid":"GO:1900530"}


id: FYPO:0001003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during nitrogen starvation","synonyms":[{"name":"fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"small vacuoles present in greater numbers during nitrogen starvation","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen depletion","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen deprivation","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001003"}


id: FYPO:0001654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal arginine import","synonyms":[{"name":"abnormal L-arginine import","type":"exact"},{"name":"abnormal L-arginine import across plasma membrane","type":"exact"},{"name":"abnormal arginine import during mitotic cell cycle","type":"related"},{"name":"abnormal arginine import during vegetative growth","type":"exact"},{"name":"abnormal arginine import into cell","type":"exact"},{"name":"abnormal arginine uptake","type":"exact"}],"termid":"FYPO:0001654"}


id: GO:0006409
data:
  {"annotated_genes":["SJAG_00178","SJAG_04622","SJAG_03156","SJAG_04083","SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72035,77375,101619,102115],"is_not":false,"summary":null,"term":"GO:0006409"},{"annotations":[78240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of tRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA transport","termid":"GO:0051031"},{"relation_name":"is_a","term_name":"ncRNA export from nucleus","termid":"GO:0097064"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_02661":null,"SJAG_03156":null,"SJAG_04083":null,"SJAG_04622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0006913"],"is_obsolete":false,"name":"tRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA export from cell nucleus","type":"exact"},{"name":"tRNA export out of nucleus","type":"exact"},{"name":"tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"tRNA-nucleus export","type":"exact"}],"termid":"GO:0006409","terms_by_termid":{"GO:0006409":null,"GO:0071528":null}}


id: PBO:0083437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOL036W","termid":"PBO:0083437"}


id: PBO:0059190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member F","termid":"PBO:0059190"}


id: PBO:0030227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus_during_salt_stress","termid":"PBO:0030227"}


id: FYPO:0003565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during meiosis I","synonyms":[{"name":"increased protein phosphorylation during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003565"}


id: PR:Q9Y7S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C569.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.06","synonyms":[{"name":"Spom972h-SPCC569.06","type":"exact"}],"termid":"PR:Q9Y7S5"}


id: PBO:0055716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMF1 antisense RNA 1","termid":"PBO:0055716"}


id: GO:2000589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000589"}


id: PBO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin","termid":"PBO:0045707"}


id: GO:0007626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotory behavior","synonyms":[{"name":"behavior via locomotion","type":"exact"},{"name":"locomotion in response to stimulus","type":"exact"},{"name":"locomotory behavioral response to stimulus","type":"exact"},{"name":"locomotory behaviour","type":"exact"},{"name":"locomotory behavioural response to stimulus","type":"exact"}],"termid":"GO:0007626"}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: PBO:0031706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_necrotic_cell_death_(obsolete_FYPO:0000504)","termid":"PBO:0031706"}


id: PBO:0053359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-2, pseudogene","termid":"PBO:0053359"}


id: GO:0014836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a satellite cell becomes restricted such that it will develop into a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["PMID:16607119","GOC:ef","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"},{"relation_name":"part_of","term_name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment involved in skeletal muscle regeneration","termid":"GO:0014836"}


id: PBO:0026903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ribonucleotide_incorporation_on_leading_strand","termid":"PBO:0026903"}


id: FYECO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanoxerine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanoxerine","termid":"FYECO:0000347"}


id: GO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatase activity","termid":"GO:0010921"}


id: PBO:0082725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ribosome quality control complex (RQC); RQC (Rqc1p-Rkr1p-Rqc2p-Cdc48p-Npl4p-Ufd1p) is a ribosome-bound complex required for the degradation of polypeptides arising from stalled translation; required along with Rkr1p for recruitment of the Cdc48p-Npl4p-Ufd1p AAA ATPase complex to the RQC","termid":"PBO:0082725"}


id: PBO:0068344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 115","termid":"PBO:0068344"}


id: PBO:0056348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 6","termid":"PBO:0056348"}


id: PBO:0026798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_regulatory_particle_binding","termid":"PBO:0026798"}


id: GO:1902206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-2-mediated signaling pathway.","definition_xrefs":["PMID:11909529","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-2-mediated signaling pathway","termid":"GO:1902205"},{"relation_name":"negatively_regulates","term_name":"interleukin-2-mediated signaling pathway","termid":"GO:0038110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-2-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-2-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-2-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-2-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:1902206"}


id: GO:0110143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria. Magnetosomes form linear chains that align along the cellular motility axis at midcell and function in bacterial navigation along the Earth's magnetic field. They are formed by invagination of the cell inner membrane; in some species they remain connected to the inner membrane, in others they pinch off to form independent intracellular vesicles.","definition_xrefs":["GOC:aa","PMID:27620945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome","termid":"GO:0110143"}


id: GO:0047288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminyl derivative + CMP-N-acetyl-beta-neuraminate = N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminyl derivative + CMP + H(+).","definition_xrefs":["MetaCyc:2.4.99.2-RXN","EC:2.4.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase","secondary_identifiers":["RHEA:18021"],"synonyms":[{"name":"monosialoganglioside sialyltransferase","type":"exact"}],"termid":"GO:0047288"}


id: PR:Q9P7U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C977.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.06","synonyms":[{"name":"Spom972h-SPAC977.06","type":"exact"}],"termid":"PR:Q9P7U3"}


id: GO:0007027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of the specialized microtubules of the axoneme.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule depolymerization","termid":"GO:0007026"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"},{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"negatively_regulates","term_name":"axonemal microtubule depolymerization","termid":"GO:0060404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"negative regulation of axonemal microtubule depolymerization","synonyms":[{"name":"axonemal microtubule stabilization","type":"exact"},{"name":"negative regulation of microtubule depolymerization in axoneme","type":"related"}],"termid":"GO:0007027"}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: GO:0060640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the formation of a tooth bud by the secretion of a signal from a mesenchymal cell and its reception and subsequent change in the identity of an epithelial cell of the tooth bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042488"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of dentin-containing tooth bud formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of dentine-containing tooth bud formation by mesenchymal-epithelial signaling","type":"related"},{"name":"positive regulation of dentine-containing tooth bud formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060640"}


id: PATO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking physically interaction with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociated from","synonyms":[{"name":"dissociated","type":"exact"}],"termid":"PATO:0001738"}


id: GO:1905444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"negatively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of clathrin coat assembly","synonyms":[{"name":"down regulation of clathrin cage assembly","type":"exact"},{"name":"down regulation of clathrin coat assembly","type":"exact"},{"name":"down-regulation of clathrin cage assembly","type":"exact"},{"name":"down-regulation of clathrin coat assembly","type":"exact"},{"name":"downregulation of clathrin cage assembly","type":"exact"},{"name":"downregulation of clathrin coat assembly","type":"exact"},{"name":"inhibition of clathrin cage assembly","type":"narrow"},{"name":"inhibition of clathrin coat assembly","type":"narrow"},{"name":"negative regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905444"}


id: PBO:0057650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-3","termid":"PBO:0057650"}


id: PBO:0046523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum metallopeptidase 1","termid":"PBO:0046523"}


id: PBO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 95","termid":"PBO:0042863"}


id: FYECO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dihydroxyacetone was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ dihydroxyacetone","synonyms":[{"name":"DHA added","type":"exact"}],"termid":"FYECO:0000076"}


id: FYPO:0001476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of guanosine-diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal guanosine-diphosphatase activity","synonyms":[{"name":"abnormal GDPase activity","type":"exact"}],"termid":"FYPO:0001476"}


id: GO:0010355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisic acid + farnesyl diphosphate = 2-methyl-6-farnesylplastoquinol.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"homogentisate farnesyltransferase activity","termid":"GO:0010355"}


id: GO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state.","definition_xrefs":["GOC:mah","PMID:3091429","PMID:7781901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell cellular homeostasis","synonyms":[{"name":"muscle fiber maintenance","type":"narrow"},{"name":"muscle homeostasis","type":"related"}],"termid":"GO:0046716"}


id: GO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostanoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"prostanoid receptor binding","synonyms":[{"name":"prostanoid receptor ligand","type":"narrow"}],"termid":"GO:0031862"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:isa_complete","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: PBO:0089496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker, pericentrin/kendrin Pcp1","termid":"PBO:0089496"}


id: PBO:0091649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin, involved in actin cytoskeleton organization","termid":"PBO:0091649"}


id: GO:0140146
data:
  {"annotated_genes":["SJAG_04698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112221],"is_not":false,"summary":null,"term":"GO:0140146"}]},"cv_name":"biological_process","definition":"The directed movement of calcium cations into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:vw","PMID:8628289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"calcium ion import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140146","terms_by_termid":{"GO:0140146":null}}


id: PBO:0082679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; prevents polyubiquitination of the arrestin-related protein Rim8p, thereby directing its monoubiquitination by Rsp5p; homologous to the mouse and human Tsg101 tumor susceptibility gene; mutants exhibit a Class E Vps phenotype;","termid":"PBO:0082679"}


id: PBO:0028598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrostatic_pressure","termid":"PBO:0028598"}


id: PBO:0048122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 3 (Lewis blood group)","termid":"PBO:0048122"}


id: GO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which disassembled Golgi vesicles are localized into daughter cells upon cell division.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Golgi distribution to daughter cells","synonyms":[{"name":"Golgi apparatus distribution to daughter cells","type":"exact"}],"termid":"GO:0090167"}


id: PBO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit Cdc6","termid":"PBO:0004185"}


id: GO:0045698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synergid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of synergid differentiation","termid":"GO:0045697"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"synergid differentiation","termid":"GO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synergid differentiation","synonyms":[{"name":"down regulation of synergid differentiation","type":"exact"},{"name":"down-regulation of synergid differentiation","type":"exact"},{"name":"downregulation of synergid differentiation","type":"exact"},{"name":"inhibition of synergid differentiation","type":"narrow"},{"name":"negative regulation of synergid cell differentiation","type":"exact"}],"termid":"GO:0045698"}


id: GO:0072237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal tubule over time, from its formation to the mature structure. The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal tubule development","termid":"GO:0072237"}


id: PBO:0046603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 5","termid":"PBO:0046603"}


id: GO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth hormone","termid":"GO:0060416"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}


id: PBO:0057968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689a","termid":"PBO:0057968"}


id: PBO:0078422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-3","termid":"PBO:0078422"}


id: GO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xylulose biosynthetic process","synonyms":[{"name":"xylulose anabolism","type":"exact"},{"name":"xylulose biosynthesis","type":"exact"},{"name":"xylulose formation","type":"exact"},{"name":"xylulose synthesis","type":"exact"}],"termid":"GO:0005999"}


id: GO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"},{"relation_name":"is_a","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}


id: PBO:0055678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase G, endothelial type","termid":"PBO:0055678"}


id: GO:0033093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, elongated, rod-shaped secretory granule characteristic of vascular endothelial cells that contain a number of structurally and functionally distinct proteins, of which the best characterized are von Willebrand factor (VWF) and P-selectin. Weibel-Palade bodies are formed from the trans-Golgi network in a process that depends on VWF, which is densely packed in a highly organized manner, and on coat proteins that remain associated with the granules. Upon cell stimulation, regulated exocytosis releases the contained proteins to the cell surface, where they act in the recruitment of platelets and leukocytes and in inflammatory and vasoactive responses.","definition_xrefs":["PMID:16087708","PMID:11935287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Weibel-Palade body","secondary_identifiers":["Wikipedia:Weibel-Palade_body"],"termid":"GO:0033093"}


id: PBO:0031287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype","termid":"PBO:0031287"}


id: FYPO:0005572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell periphery","synonyms":[{"name":"normal protein localisation to cell periphery","type":"exact"},{"name":"normal protein localization to cell periphery during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005572"}


id: GO:0098960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occuring in the postsynaptic membrane during synaptic transmission.","definition_xrefs":["GOC:signaling","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor activity","synonyms":[{"name":"neurotransmitter receptor activity involved in chemical synaptic transmission","type":"exact"}],"termid":"GO:0098960"}


id: FYPO:0003107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal, and that continue to decrease in length over successive generations.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shortened telomeres during vegetative growth","termid":"FYPO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"progressively shortening telomeres during vegetative growth","synonyms":[{"name":"progressively decreasing telomere length during vegetative growth","type":"exact"},{"name":"progressively shortening telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003107"}


id: PBO:0042819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide transporter 1","termid":"PBO:0042819"}


id: PBO:0066106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras protein specific guanine nucleotide releasing factor 1","termid":"PBO:0066106"}


id: FYPO:0000162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to stress","termid":"FYPO:0000162"}


id: GO:0044584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellodextrin, a glucose polymer of 2 or more glucose monomers.","definition_xrefs":["GOC:tt","GOC:mengo_curators","PMID:18952792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"},{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellodextrin binding","termid":"GO:0044584"}


id: GO:0051001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS inhibitor","type":"narrow"},{"name":"down regulation of nitric-oxide synthase activity","type":"exact"},{"name":"down-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"downregulation of nitric-oxide synthase activity","type":"exact"},{"name":"inhibition of nitric-oxide synthase activity","type":"narrow"},{"name":"negative regulation of NOS activity","type":"exact"},{"name":"nitric-oxide synthase inhibitor","type":"narrow"}],"termid":"GO:0051001"}


id: GO:0019396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid (3,4,5-trihydroxybenzoic acid).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gallate catabolic process","secondary_identifiers":["UM-BBD_pathwayID:gal","GO:0018918"],"synonyms":[{"name":"gallate breakdown","type":"exact"},{"name":"gallate catabolism","type":"exact"},{"name":"gallate degradation","type":"exact"},{"name":"gallate metabolic process","type":"related"},{"name":"gallate metabolism","type":"related"},{"name":"gallic acid catabolic process","type":"exact"},{"name":"gallic acid catabolism","type":"exact"},{"name":"gallic acid metabolic process","type":"related"},{"name":"gallic acid metabolism","type":"related"}],"termid":"GO:0019396"}


id: PBO:0063140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS domain containing serine/threonine kinase","termid":"PBO:0063140"}


id: GO:0140835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphothreonine (position 4).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0004672","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain T4 kinase activity","type":"exact"}],"termid":"GO:0140835"}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: GO:0015314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + aminotriazole(in) = H+(in) + aminotriazole(out).","definition_xrefs":["TC:2.A.1.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole:proton antiporter activity","termid":"GO:0045119"},{"relation_name":"is_a","term_name":"aminotriazole transmembrane transporter activity","termid":"GO:1901478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"aminotriazole:proton antiporter activity","synonyms":[{"name":"aminotriazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015314"}


id: PBO:0066334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 2 pseudogene 1","termid":"PBO:0066334"}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: GO:0007418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate.","definition_xrefs":["GOC:bf","GOC:go_curators","PMID:12075342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral midline development","termid":"GO:0007418"}


id: PBO:0064221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C delta 3","termid":"PBO:0064221"}


id: FYPO:0003349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during anaphase B during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003349"}


id: PBO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C pseudogene","termid":"PBO:0060616"}


id: PBO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0000416"}


id: GO:0007541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an organism interprets its X to autosomal chromosomal complement.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"primary sex determination, soma","termid":"GO:0007539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, primary response to X:A ratio","termid":"GO:0007541"}


id: FYECO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ oleate","termid":"FYECO:0000320"}


id: PR:Q6E434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tbf1 gene.","definition_xrefs":["UniProtKB:Q6E434","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric DNA-binding factor trf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.13","synonyms":[{"name":"Spom972h-tbf1","type":"exact"}],"termid":"PR:Q6E434"}


id: GO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to vascular endothelial cell via adhesion molecules.","definition_xrefs":["GOC:add","GOC:BHF","GOC:BHF_miRNA","GOC:bc","PMID:23897866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}


id: GO:0032777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric H4/H2A histone acetyltransferase complex with a substrate preference of chromatin over free histones. It contains a subset of the proteins found in the larger NuA4 histone acetyltransferase complex; for example, the S. cerevisiae complex contains Esa1p, Yng2p, and Epl1p.","definition_xrefs":["GOC:rb","PMID:12782659","PMID:15964809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"piccolo histone acetyltransferase complex","termid":"GO:0032777"}


id: PBO:0027144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027144"}


id: PBO:0066228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 34","termid":"PBO:0066228"}


id: GO:0010764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"negatively_regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast migration","synonyms":[{"name":"negative regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010764"}


id: FYPO:0000319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of spores and germinated spores most of which go on to divide once or twice. Some germinated spores remain septated and do not complete cell division.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and divided germinated spores (obsolete FYPO:0000319)","synonyms":[{"name":"put cut","type":"related"}],"termid":"FYPO:0000319"}


id: GO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function.","definition_xrefs":["GOC:dph","PMID:15365173","PMID:15365178","GOC:add","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina homeostasis","termid":"GO:0001895"}


id: GO:0008671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-galactonate + ATP = 6-phospho-2-dehydro-3-deoxy-D-galactonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.58","RHEA:16525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"2-dehydro-3-deoxygalactonokinase activity","secondary_identifiers":["KEGG_REACTION:R03387","MetaCyc:DEHYDDEOXGALACTKIN-RXN"],"synonyms":[{"name":"2-keto-3-deoxy-galactonokinase activity","type":"related"},{"name":"2-keto-3-deoxygalactonate kinase (phosphorylating)","type":"related"},{"name":"2-keto-3-deoxygalactonokinase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate kinase activity","type":"related"},{"name":"ATP:2-dehydro-3-deoxy-D-galactonate 6-phosphotransferase activity","type":"related"}],"termid":"GO:0008671"}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000298","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: SO:1000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variation that causes an increase in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000087 sequence_variation_increasing_level_of_transcript (obsolete SO:1000087)","synonyms":[{"name":"mutation increasing level of transcript","type":"exact"},{"name":"sequence variation increasing level of transcript","type":"exact"}],"termid":"SO:1000087"}


id: PBO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 33","termid":"PBO:0070292"}


id: GO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptosis that results in the maintenance of the steady-state number of cells within a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"part_of","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptosis involved in tissue homeostasis","termid":"GO:0060785"}


id: PBO:0088732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb5","termid":"PBO:0088732"}


id: PBO:0091524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase involved in NADPH regeneration","termid":"PBO:0091524"}


id: GO:0006635
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72811],"is_not":false,"summary":null,"term":"GO:0006635"}]},"cv_name":"biological_process","definition":"A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:FAO-PWY","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty acid beta-oxidation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0006635","terms_by_termid":{"GO:0006635":null}}


id: PBO:0055149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2568","termid":"PBO:0055149"}


id: PBO:0002246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase (predicted)","termid":"PBO:0002246"}


id: GO:0072004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of regions of the embryo into the area in which the kidney rudiment will develop.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney field specification","synonyms":[{"name":"specification of kidney anlage","type":"related"}],"termid":"GO:0072004"}


id: GO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell contraction","termid":"GO:0086003"}


id: PBO:0081886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 836","termid":"PBO:0081886"}


id: GO:0071808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axoneme part that is found in the flagella of mammalian sperm and is located in the middle piece between the outer dense fibers (on the concave side of outer dense fibers as seen in cross-section).","definition_xrefs":["GOC:mah","GOC:sl","PMID:20108326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"satellite fibril","termid":"GO:0071808"}


id: GO:0070127
data:
  {"annotated_genes":["SJAG_04762","SJAG_01352","SJAG_02428","SJAG_04840","SJAG_03585","SJAG_01797","SJAG_00653","SJAG_02977","SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"},{"annotations":[103615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070144"},{"annotations":[114765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070146"},{"annotations":[72544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070150"},{"annotations":[91522,72724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070158"},{"annotations":[90531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070159"},{"annotations":[71403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070183"},{"annotations":[93818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"}]},"cv_name":"biological_process","definition":"The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00653":null,"SJAG_01352":null,"SJAG_01797":null,"SJAG_02428":null,"SJAG_02977":null,"SJAG_03585":null,"SJAG_04094":null,"SJAG_04762":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0006520","GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA aminoacylation for mitochondrial protein translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070127","terms_by_termid":{"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070159":null,"GO:0070183":null,"GO:0070185":null}}


id: SO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is increased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_polyadenylation_variant","synonyms":[{"name":"increased polyadenylation variant","type":"exact"}],"termid":"SO:0001802"}


id: PBO:0084747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial lysine-tRNA synthetase; required for import of both aminoacylated and deacylated forms of tRNA(Lys) into mitochondria and for aminoacylation of mitochondrially encoded tRNA(Lys)","termid":"PBO:0084747"}


id: PBO:0081799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 728","termid":"PBO:0081799"}


id: PBO:0087208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; required for wybutosine formation in phenylalanine-accepting tRNA; member of the seven beta-strand family","termid":"PBO:0087208"}


id: PBO:0073270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 14","termid":"PBO:0073270"}


id: GO:0033874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + 5beta-scymnol = 5beta-scymnol sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["RHEA:15477","EC:2.8.2.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"scymnol sulfotransferase activity","secondary_identifiers":["MetaCyc:2.8.2.32-RXN","KEGG_REACTION:R07798"],"termid":"GO:0033874"}


id: PBO:0012231
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that of the rhp51delta single mutant","termid":"PBO:0012231"}


id: GO:0021754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:curators","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nucleus development","termid":"GO:0021754"}


id: PBO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim21 (predicted)","termid":"PBO:0004947"}


id: PR:O59678
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17602:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulatory protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.16","secondary_identifiers":["UniProtKB:O59678"],"synonyms":[{"name":"Spom972h-RRS1","type":"exact"}],"termid":"PR:O59678"}


id: PR:O13632
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dual specificity protein phosphatase 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02852","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase yvh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.06","secondary_identifiers":["UniProtKB:O13632"],"synonyms":[{"name":"PTPase yvh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DUSP12","type":"exact"}],"termid":"PR:O13632"}


id: GO:0097166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lens epithelial cells, resulting in the expansion of a cell population. Lens epithelial cells make up the lens epithelium, which is located in the anterior portion of the lens between the lens capsule and the lens fibers and is a simple cuboidal epithelium. The epithelial cells of the lens regulate most of the homeostatic functions of the lens such as osmolarity and liquid volume. The lens epithelial cells also serve as the progenitors for new lens fibers. The lens epithelium constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth.","definition_xrefs":["PMID:18423449","Wikipedia:Lens_%28anatomy%29#Lens_epithelium","CL:0002224","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens epithelial cell proliferation","termid":"GO:0097166"}


id: GO:0042067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of polarized ommatidia. Ommatidia occur in two chiral forms. The trapezoidal arrangement of photoreceptors in the dorsal part of the eye is the mirror image of that in the ventral part.","definition_xrefs":["GOC:ascb_2009","PMID:3076112","GOC:dph","GOC:tb","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of ommatidial planar polarity","synonyms":[{"name":"establishment of ommatidial polarity","type":"exact"}],"termid":"GO:0042067"}


id: PBO:0044804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 104A","termid":"PBO:0044804"}


id: PBO:0053639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 686","termid":"PBO:0053639"}


id: GO:0051224
data:
  {"annotated_genes":["SJAG_01311","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[102181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01311":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein transport","type":"exact"},{"name":"down-regulation of protein transport","type":"exact"},{"name":"downregulation of protein transport","type":"exact"},{"name":"inhibition of protein transport","type":"narrow"}],"termid":"GO:0051224","terms_by_termid":{"GO:0042308":null,"GO:0042997":null}}


id: MOD:00509
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12643539","PubMed:6273432","Unimod:141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:00509"}


id: PBO:0041584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 42","termid":"PBO:0041584"}


id: GO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foregut region specified to become the pancreas forms a bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"branching involved in pancreas morphogenesis","termid":"GO:0061114"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic bud formation","termid":"GO:0061130"}


id: GO:0006562
data:
  {"annotated_genes":["SJAG_01903","SJAG_02235","SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88791],"is_not":false,"summary":null,"term":"GO:0006562"},{"annotations":[70339,77016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null,"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"proline catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"proline breakdown","type":"exact"},{"name":"proline catabolism","type":"exact"},{"name":"proline degradation","type":"exact"}],"termid":"GO:0006562","terms_by_termid":{"GO:0006562":null,"GO:0010133":null}}


id: PBO:0077602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11D","termid":"PBO:0077602"}


id: PBO:0047275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group B","termid":"PBO:0047275"}


id: GO:0039543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The post-transcriptional removal by a virus of the 5' triphosphate group of their viral RNA, thereby preventing host RIG-I from recognizing viral RNA in the host cell. The intracellular pattern recognition receptor RIG-I (also known as DDX58) recognizes viral RNAs containing 5' triphosphates; removal by the virus of the 5'-terminal triphosphate group from their genome protects the viral RNA from RIG-recognition.","definition_xrefs":["VZ:856","PMID:18446221"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I activity by viral RNA 5' processing (obsolete GO:0039543)","synonyms":[{"name":"suppression by virus of host RIG-I activity by inhibition of RNA binding","type":"narrow"}],"termid":"GO:0039543"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: GO:1901330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"negatively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontoblast differentiation","synonyms":[{"name":"down regulation of odontoblast differentiation","type":"exact"},{"name":"down-regulation of odontoblast differentiation","type":"exact"},{"name":"downregulation of odontoblast differentiation","type":"exact"},{"name":"inhibition of odontoblast differentiation","type":"narrow"}],"termid":"GO:1901330"}


id: PBO:0091157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine/xanthine/hypoxanthine phosphoribosyltransferase Hpt1","termid":"PBO:0091157"}


id: PBO:0073817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 18","termid":"PBO:0073817"}


id: FYPO:0001221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is in the same range as wild type (approximately 0.076-0.089).","definition_xrefs":["PomBase:mah","PMID:17998401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleus:cytoplasm ratio","synonyms":[{"name":"normal nuclear:cytoplasmic ratio","type":"exact"},{"name":"normal nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"normal nucleus:cell volume ratio","type":"exact"},{"name":"normal nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"normal nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"normal nucleus:cytoplasm volume ratio","type":"exact"}],"termid":"FYPO:0001221"}


id: FYPO:0004074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000532"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to pheromone","synonyms":[{"name":"delayed cell cycle arrest in mitotic G1 phase in response to pheromone","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase during cellular response to pheromone","type":"exact"},{"name":"delayed onset of mitotic G1 arrest in response to pheromone","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest in G1 phase in response to pheromone","type":"exact"},{"name":"delayed onset of pheromone-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004074"}


id: PBO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 1","termid":"PBO:0061610"}


id: FYPO:0000528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pexophagy begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of peroxisome degradation","synonyms":[{"name":"delayed onset of pexophagy","type":"exact"},{"name":"delayed peroxisome degradation","type":"exact"},{"name":"pexophagy: delayed","type":"related"}],"termid":"FYPO:0000528"}


id: PBO:0087819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (40 kDa); involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087819"}


id: PBO:0064279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RUN domain containing M1","termid":"PBO:0064279"}


id: PBO:0071488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 29","termid":"PBO:0071488"}


id: PBO:0071959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6","termid":"PBO:0071959"}


id: PATO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue the bearer's having or exhibiting variation its shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of shape","termid":"PATO:0001929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant shape","termid":"PATO:0001930"}


id: PBO:0031784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytokinesis","termid":"PBO:0031784"}


id: GO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP metabolic process (obsolete GO:0030825)","synonyms":[{"name":"activation of cGMP metabolic process","type":"narrow"},{"name":"positive regulation of cGMP metabolism","type":"exact"},{"name":"stimulation of cGMP metabolic process","type":"narrow"},{"name":"up regulation of cGMP metabolic process","type":"exact"},{"name":"up-regulation of cGMP metabolic process","type":"exact"},{"name":"upregulation of cGMP metabolic process","type":"exact"}],"termid":"GO:0030825"}


id: GO:0097218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the cell wall of a sieve tube member that bears one or more highly specialized sieve areas.","definition_xrefs":["ISBN:0471738433","POC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"sieve plate","termid":"GO:0097218"}


id: PR:Q9UR07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-11 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.17","synonyms":[{"name":"Spom972h-Tf2-11","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR07"}


id: FYPO:0003965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}


id: PBO:0071160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23","termid":"PBO:0071160"}


id: PBO:0040581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid-CoA:amino acid N-acyltransferase","termid":"PBO:0040581"}


id: GO:0060135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that allows an embryo or fetus to develop within it.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in female pregnancy","termid":"GO:0060135"}


id: PBO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex gamma subunit Apl4","termid":"PBO:0005855"}


id: GO:0032184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polymer of the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO binding","termid":"GO:0032183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SUMO polymer binding","synonyms":[{"name":"Smt3 polymer binding","type":"exact"}],"termid":"GO:0032184"}


id: PBO:0111342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex histone deacetylase (class II) subunit, Clr3","termid":"PBO:0111342"}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: PATO:0001242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the distance between repeating units of a wave pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wavelength","termid":"PATO:0001242"}


id: GO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by ER resident proteases contributing to antigen processing and presentation.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15224092","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis within endoplasmic reticulum associated with antigen processing and presentation","synonyms":[{"name":"ER proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"endoplasmic reticulum proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"proteolysis within ER associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002498"}


id: PBO:0087607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cohesin complex; which is required for sister chromatid cohesion during mitosis and meiosis and interacts with centromeres and chromosome arms; relocalizes to the cytosol in response to hypoxia; essential for viability","termid":"PBO:0087607"}


id: PBO:0003678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family Isp4","termid":"PBO:0003678"}


id: FYPO:0006096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cables is abnormal. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0007578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to actin cable","synonyms":[{"name":"abnormal protein localisation to actin cable","type":"exact"},{"name":"abnormal protein localization to actin cable during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to actin cable during vegetative growth","type":"exact"},{"name":"abnormal protein localization to formin-nucleated actin cable","type":"exact"}],"termid":"FYPO:0006096"}


id: GO:0102475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-beta-D-glucosyl-2-hydroxyeriodictyol = isoorientin + H2O.","definition_xrefs":["EC:4.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-hydroxyeriodictyol 6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14081"],"termid":"GO:0102475"}


id: PBO:0029099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_methionine_sulfur_source","termid":"PBO:0029099"}


id: PBO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase (GABA transaminase)","termid":"PBO:0002889"}


id: GO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is double stranded RNA (dsRNA). Genomic dsRNA is first transcribed into single-stranded (ss) mRNA, which is then replicated to ds-genomic RNA.","definition_xrefs":["GOC:bf","GOC:jl","VZ:1936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double stranded viral RNA replication","termid":"GO:0039691"}


id: GO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self-propelled movement of a mesendodermal cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium assembly involved in ameboidal cell migration","termid":"GO:0003363"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lamellipodium assembly involved in mesendodermal cell migration","termid":"GO:0003364"}


id: PBO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C10","termid":"PBO:0045222"}


id: PBO:0091230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane aquaporin family transmembrane transporter","termid":"PBO:0091230"}


id: PBO:0028601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrosative_stress","termid":"PBO:0028601"}


id: GO:1903468
data:
  {"annotated_genes":["SJAG_02074","SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99613,108580,113978],"is_not":false,"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GO_REF:0000058","PMID:1234","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle DNA replication","termid":"GO:1903465"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"positive regulation of DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"activation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"positive regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903468","terms_by_termid":{"GO:1903468":null}}


id: PBO:0005288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain protein, implicated in translation","termid":"PBO:0005288"}


id: GO:1901282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructoselysine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"fructosamine biosynthetic process","termid":"GO:0030391"},{"relation_name":"is_a","term_name":"fructoselysine metabolic process","termid":"GO:0030393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructoselysine biosynthetic process","synonyms":[{"name":"fructosyllysine anabolism","type":"exact"},{"name":"fructosyllysine biosynthesis","type":"exact"},{"name":"fructosyllysine biosynthetic process","type":"exact"},{"name":"fructosyllysine formation","type":"exact"},{"name":"fructosyllysine synthesis","type":"exact"}],"termid":"GO:1901282"}


id: PBO:0060284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 1","termid":"PBO:0060284"}


id: GO:0015256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete monocarboxylate channel activity (obsolete GO:0015256)","synonyms":[{"name":"monocarboxylate channel activity","type":"exact"}],"termid":"GO:0015256"}


id: PBO:0058394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4766","termid":"PBO:0058394"}


id: GO:0004316
data:
  {"annotated_genes":["SJAG_04972","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93305,93835],"is_not":false,"summary":null,"term":"GO:0004316"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+.","definition_xrefs":["RHEA:17397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03198":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.100","MetaCyc:3-OXOACYL-ACP-REDUCT-RXN","Reactome:R-HSA-8862152"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-acyl-carrier-protein:NADP+ oxidoreductase activity","type":"related"},{"name":"3-ketoacyl acyl carrier protein reductase activity","type":"related"},{"name":"3-oxoacyl-ACP reductase activity","type":"exact"},{"name":"3-oxoacyl-ACPreductase activity","type":"related"},{"name":"3-oxoacyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"3-oxoacyl-acyl-carrier-protein reductase activity","type":"related"},{"name":"NADPH-specific 3-oxoacyl-acylcarrier proteinreductase activity","type":"related"},{"name":"beta-ketoacyl acyl carrier protein (ACP) reductase activity","type":"related"},{"name":"beta-ketoacyl reductase activity","type":"related"},{"name":"beta-ketoacyl thioester reductase activity","type":"related"},{"name":"beta-ketoacyl-ACP reductase activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein reductase activity","type":"related"},{"name":"beta-ketoacyl-acyl-carrier protein(ACP) reductase activity","type":"related"}],"termid":"GO:0004316","terms_by_termid":{"GO:0004316":null}}


id: PBO:0077138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction associated protein 1","termid":"PBO:0077138"}


id: GO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nucleic acids from one side of a membrane to the other. Nucleic acids are single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}


id: FYECO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any condition in which cells are first grown in a medium with one nitrogen source, and then shifted to a medium with a different nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift","termid":"FYECO:0000221"}


id: PBO:0068649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 30, pseudogene","termid":"PBO:0068649"}


id: PBO:0089527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase Zwf1","termid":"PBO:0089527"}


id: PBO:0063260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 6","termid":"PBO:0063260"}


id: PBO:0043712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1","termid":"PBO:0043712"}


id: GO:0017194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal isoleucine of proteins to form the derivative N-acetyl-L-isoleucine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-isoleucine modification","termid":"GO:0018203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-isoleucine acetylation","termid":"GO:0017194"}


id: PBO:0074499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 47","termid":"PBO:0074499"}


id: PBO:0070741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 11","termid":"PBO:0070741"}


id: PBO:0069958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1251, pseudogene","termid":"PBO:0069958"}


id: GO:1905755
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cytoplasmic microtubule.","definition_xrefs":["GOC:TermGenie","PMID:15177031","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cytoplasmic microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cytoplasmic microtubule","type":"exact"}],"termid":"GO:1905755","terms_by_termid":{"GO:1904518":null}}


id: PR:O13688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nse6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosome element 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.08c","synonyms":[{"name":"Spom972h-nse6","type":"exact"},{"name":"core protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-SMC element 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13688"}


id: GO:0031322
data:
  {"annotated_genes":["SJAG_03746","SJAG_04901","SJAG_02529","SJAG_01483","SJAG_02248","SJAG_05309","SJAG_04271","SJAG_00486","SJAG_00405","SJAG_04010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88247,92998,93693,96031,96032,99194,100454,103220,104139,110567],"is_not":false,"summary":null,"term":"GO:0031322"}]},"cv_name":"biological_process","definition":"A spindle pole body (SPB) organization process that takes place during the second meiotic division during ascospore formation and results in the structural reorganization of the SPB; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00486":null,"SJAG_01483":null,"SJAG_02248":null,"SJAG_02529":null,"SJAG_03746":null,"SJAG_04010":null,"SJAG_04271":null,"SJAG_04901":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0030437","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"ascospore-type prospore-specific spindle pole body remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore-specific spindle pole body modification","type":"related"},{"name":"ascospore-type prospore-specific spindle pole body remodelling","type":"exact"},{"name":"forespore specific spindle pole body remodeling","type":"exact"},{"name":"forespore-specific spindle pole body remodeling","type":"exact"},{"name":"prospore-specific spindle pole body remodeling","type":"exact"},{"name":"sporulation-specific spindle pole body remodeling","type":"exact"}],"termid":"GO:0031322","terms_by_termid":{"GO:0031322":null}}


id: GO:1990587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB, FtsL and FtsQ.","definition_xrefs":["GOC:bhm","PMID:21784946","PMID:15165235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"divisome complex","termid":"GO:1990586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FtsQBL complex","synonyms":[{"name":"FtsB-FtsL-FtsQ complex","type":"exact"}],"termid":"GO:1990587"}


id: GO:1903051
data:
  {"annotated_genes":["SJAG_00475","SJAG_03048","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[76274,103338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteolysis involved in protein catabolic process.","definition_xrefs":["GOC:rl","GOC:BHF","GO_REF:0000058","PMID:18307834","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"negatively_regulates","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis involved in protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"down regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"down regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"down regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"down regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"down regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down-regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"down-regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"down-regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down-regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"down-regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"down-regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"down-regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"downregulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"downregulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"downregulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"downregulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"downregulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"downregulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"downregulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"inhibition of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"inhibition of peptidolysis during cellular protein catabolism","type":"related"},{"name":"inhibition of peptidolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"inhibition of peptidolysis involved in cellular protein catabolism","type":"narrow"},{"name":"inhibition of proteolysis during cellular protein catabolic process","type":"related"},{"name":"inhibition of proteolysis during cellular protein catabolism","type":"related"},{"name":"inhibition of proteolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"negative regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"negative regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"negative regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"negative regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"negative regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"negative regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"negative regulation of proteolysis involved in cellular protein catabolic process","type":"exact"}],"termid":"GO:1903051","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: SO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genome is the sum of genetic material within a cell or virion.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"has_part","term_name":"replicon","termid":"SO:0001235"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome"],"termid":"SO:0001026"}


id: GO:0043940
data:
  {"annotated_genes":["SJAG_04853","SJAG_00993","SJAG_02169","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation","termid":"GO:0034306"},{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043940","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0022038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres.","definition_xrefs":["GOC:jid","GOC:curators","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum development","termid":"GO:0022038"}


id: GO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + charged-fMet-tRNAs = L-methionylaminoacyl-tRNA + formate.","definition_xrefs":["MetaCyc:3.5.1.27-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete N-formylmethionylaminoacyl-tRNA deformylase activity (obsolete GO:0047410)","synonyms":[{"name":"N-formyl-L-methionylaminoacyl-tRNA amidohydrolase activity","type":"exact"}],"termid":"GO:0047410"}


id: GO:0046924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-L-phenylalanine.","definition_xrefs":["RESID:AA0340","PMID:12696888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking via 2-(S-L-cysteinyl)-L-phenylalanine","secondary_identifiers":["PMID:36302388"],"termid":"GO:0046924"}


id: PBO:0049421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gulonolactone (L-) oxidase, pseudogene","termid":"PBO:0049421"}


id: PBO:0088483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein Sib3","termid":"PBO:0088483"}


id: GO:1902983
data:
  {"annotated_genes":["SJAG_03780","SJAG_02667","SJAG_01823","SJAG_03495","SJAG_02908","SJAG_02818","SJAG_02199","SJAG_00884","SJAG_00874","SJAG_05197","SJAG_00863","SJAG_04879","SJAG_00814","SJAG_02182","SJAG_00729","SJAG_01762","SJAG_00272","SJAG_01010","SJAG_04190","SJAG_04877","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70442,91134,103644,106408,108821,109075,110175,111760,111933,112061],"is_not":false,"summary":null,"term":"GO:1902983"},{"annotations":[100554,101268,91319,105552,99101,114888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[91320,90011,101269,103373,91353,85443,100555,103750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA strand elongation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902983","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: GO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell apoptotic process","termid":"GO:0010656"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell apoptotic process","termid":"GO:0034391"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"down-regulation of smooth muscle cell apoptosis","type":"exact"},{"name":"downregulation of smooth muscle cell apoptosis","type":"exact"},{"name":"inhibition of smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of SMC apoptosis","type":"exact"},{"name":"negative regulation of smooth muscle cell apoptosis","type":"narrow"}],"termid":"GO:0034392"}


id: PBO:0000458
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.2","termid":"PBO:0000458"}


id: PBO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit (predicted)","termid":"PBO:0005783"}


id: PBO:0079901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein","termid":"PBO:0079901"}


id: PBO:0091640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing","termid":"PBO:0091640"}


id: FYPO:0004903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell separation after cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cell separation after cytokinesis RNAs are transcribed from genes whose products are involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25530312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of cell separation after cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cell separation after cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cell separation after cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cell separation after cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"decreased level of cytokinetic cell separation gene mRNA during vegetative growth","type":"related"},{"name":"reduced level of cell separation after cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004903"}


id: PBO:0038629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACKR4 pseudogene 1","termid":"PBO:0038629"}


id: PBO:0036238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human c22orf39 ortholog","termid":"PBO:0036238"}


id: PBO:0109122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycoside Hydrolase family Sixteen","termid":"PBO:0109122"}


id: PBO:0079296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 13","termid":"PBO:0079296"}


id: FYPO:0001378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"increased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"increased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"increased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001378"}


