# terms

id: GO:0110084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["PMID:29343550","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"},{"relation_name":"is_a","term_name":"negative regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903500"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110084"}


id: PBO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit (predicted)","termid":"PBO:0005781"}


id: GO:0003774
data:
  {"annotated_genes":["SJAG_02336","SJAG_00031","SJAG_04001","SJAG_00930","SJAG_00851","SJAG_03011","SJAG_03703","SJAG_04745","SJAG_02431","SJAG_02384","SJAG_00042","SJAG_01546","SJAG_01297","SJAG_02848","SJAG_00938","SJAG_02286","SJAG_01613","SJAG_00773","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[96163,99043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"},{"annotations":[78193,73791,70948,70270,75732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000146"},{"annotations":[61276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003777"},{"annotations":[92906,95431,83574,90843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[100063,104703,77720,73385,74878,75198,76665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"Generation of force resulting in movement, for example along a microfilament or microtubule, or in torque resulting in membrane scission or rotation of a flagellum. The energy required is obtained either from the hydrolysis of a nucleoside triphosphate or by an electrochemical proton gradient (proton-motive force).","definition_xrefs":["PMID:11242086","GOC:mah","GOC:vw","PMID:29716949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02431":null,"SJAG_02848":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04745":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"cytoskeletal motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1861595"],"synonyms":[{"name":"motor activity","type":"broad"}],"termid":"GO:0003774","terms_by_termid":{"GO:0000146":null,"GO:0003777":null,"GO:0008569":null,"GO:0008574":null,"GO:0061791":null,"GO:1990606":null}}


id: GO:1900308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heptasaccharide transport","termid":"GO:1900296"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"positively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltoheptaose transport","synonyms":[{"name":"activation of maltoheptaose transport","type":"narrow"},{"name":"up regulation of maltoheptaose transport","type":"exact"},{"name":"up-regulation of maltoheptaose transport","type":"exact"},{"name":"upregulation of maltoheptaose transport","type":"exact"}],"termid":"GO:1900308"}


id: PBO:0061492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of interferon response","termid":"PBO:0061492"}


id: GO:0009516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"leucoplast","secondary_identifiers":["Wikipedia:Leucoplast"],"termid":"GO:0009516"}


id: FYPO:0001589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during nitrogen starvation","termid":"FYPO:0001647"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased glutamate import during nitrogen starvation","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-glutamate import during nitrogen starvation","type":"exact"},{"name":"decreased glutamate import during nitrogen depletion","type":"exact"},{"name":"decreased glutamate import during nitrogen deprivation","type":"exact"},{"name":"decreased glutamate import into cell during nitrogen starvation","type":"exact"},{"name":"decreased glutamate transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased glutamate uptake during nitrogen starvation","type":"exact"},{"name":"reduced glutamate import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001589"}


id: PBO:0048369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 binding adaptor protein, transmembrane","termid":"PBO:0048369"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003125","GO:0003126"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: PBO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 9","termid":"PBO:0072022"}


id: PBO:0062281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 1 pseudogene","termid":"PBO:0062281"}


id: GO:0160135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:35284927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"endothelin receptor signaling pathway","termid":"GO:0086100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating endothelin receptor signaling pathway","termid":"GO:0160135"}


id: GO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-7 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-7 production","termid":"GO:0032676"},{"relation_name":"positively_regulates","term_name":"interleukin-7 production","termid":"GO:0032636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-7 production","secondary_identifiers":["GO:0150114","GO:0045413"],"synonyms":[{"name":"activation of interleukin-7 production","type":"narrow"},{"name":"positive regulation of IL-7 production","type":"exact"},{"name":"positive regulation of interleukin-7 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-7 secretion","type":"narrow"},{"name":"stimulation of interleukin-7 production","type":"narrow"},{"name":"up regulation of interleukin-7 production","type":"exact"},{"name":"up-regulation of interleukin-7 production","type":"exact"},{"name":"upregulation of interleukin-7 production","type":"exact"}],"termid":"GO:0032756"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: PBO:0043388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 2","termid":"PBO:0043388"}


id: PBO:0004655
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mei4-Dependent Expression","termid":"PBO:0004655"}


id: GO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric cap are generated and organized. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"},{"relation_name":"part_of","term_name":"metanephric cap development","termid":"GO:0072185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap morphogenesis","termid":"GO:0072186"}


id: GO:0102136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 3-epi-6-deoxocathasterone + reduced (NADPH-hemoprotein reducdtase) + O2 = 6=deoxotyphasterol + oxidized (NADPH-hemoprotein reductase) + H2O.","definition_xrefs":["RHEA:27321","GOC:pz","PMID:17138693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-epi-6-deoxocathasterone C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11531","EC:1.14.14.147"],"termid":"GO:0102136"}


id: GO:1902956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial electron transport, NADH to ubiquinone.","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000058","PMID:23530063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"mitochondrial electron transport, NADH to ubiquinone","termid":"GO:0006120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"regulation of complex I (NADH to ubiquinone)","type":"related"},{"name":"regulation of oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:1902956"}


id: PBO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13 (predicted)","termid":"PBO:0001707"}


id: PBO:0039529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 10","termid":"PBO:0039529"}


id: PBO:0089636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14","termid":"PBO:0089636"}


id: FYPO:0003643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of urease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal urease activity","termid":"FYPO:0003642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased urease activity","synonyms":[{"name":"reduced urease activity","type":"exact"}],"termid":"FYPO:0003643"}


id: PBO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 1","termid":"PBO:0047845"}


id: GO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of smooth muscle fiber over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:lm","GOC:mtg_muscle","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth muscle fiber development (obsolete GO:0048746)","synonyms":[{"name":"smooth muscle fiber development","type":"exact"},{"name":"smooth muscle fibre development","type":"exact"}],"termid":"GO:0048746"}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: GO:1900128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of G-protein activated inward rectifier potassium channel activity","synonyms":[{"name":"regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900128"}


id: GO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the replacement of an existing tooth with another tooth.","definition_xrefs":["GOC:dph","PMID:15170864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth replacement","termid":"GO:0061648"}


id: GO:0046319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucosylceramide biosynthetic process","termid":"GO:0046317"},{"relation_name":"is_a","term_name":"positive regulation of ceramide biosynthetic process","termid":"GO:2000304"},{"relation_name":"positively_regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"activation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"positive regulation of glucosylceramide anabolism","type":"exact"},{"name":"positive regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"positive regulation of glucosylceramide formation","type":"exact"},{"name":"positive regulation of glucosylceramide synthesis","type":"exact"},{"name":"stimulation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"up regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"up-regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"upregulation of glucosylceramide biosynthetic process","type":"exact"}],"termid":"GO:0046319"}


id: PBO:0079297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"titin","termid":"PBO:0079297"}


id: GO:1903339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"negatively_regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell wall organization or biogenesis","synonyms":[{"name":"down regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down-regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"downregulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"inhibition of cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis at cellular level","type":"narrow"},{"name":"inhibition of cellular cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cellular cell wall organization or biogenesis","type":"narrow"},{"name":"negative regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"negative regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903339"}


id: PBO:0016993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism (predicted)","termid":"PBO:0016993"}


id: FYPO:0007574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a shorter time than normal.","definition_xrefs":["PMID:25501814","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased duration of protein localization to mitotic SPB","type":"exact"},{"name":"decreased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced duration protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0007574"}


id: PBO:0045259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2 beta","termid":"PBO:0045259"}


id: PR:P40236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hhp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.12","synonyms":[{"name":"Spom972h-hhp2","type":"exact"}],"termid":"PR:P40236"}


id: PBO:0068350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126 pseudogene 1","termid":"PBO:0068350"}


id: GO:0033015
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044248"],"is_obsolete":false,"name":"tetrapyrrole catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole breakdown","type":"exact"},{"name":"tetrapyrrole catabolism","type":"exact"},{"name":"tetrapyrrole degradation","type":"exact"}],"termid":"GO:0033015","terms_by_termid":{"GO:0042167":null}}


id: PBO:0040208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 1","termid":"PBO:0040208"}


id: GO:0045892
data:
  {"annotated_genes":["SJAG_04584","SJAG_04921","SJAG_04613","SJAG_03997","SJAG_04539","SJAG_02730","SJAG_01601","SJAG_00441","SJAG_02231","SJAG_03845","SJAG_01804","SJAG_00290","SJAG_02255","SJAG_02385","SJAG_00969","SJAG_04268","SJAG_00266","SJAG_03702","SJAG_00581","SJAG_04186","SJAG_01199","SJAG_01157","SJAG_01230","SJAG_00802","SJAG_00996","SJAG_00410","SJAG_02981","SJAG_00861","SJAG_02846","SJAG_04039","SJAG_04389","SJAG_00792","SJAG_04249","SJAG_01579","SJAG_03067","SJAG_03916","SJAG_02752","SJAG_01680","SJAG_01799","SJAG_03982","SJAG_01254","SJAG_02104","SJAG_00124","SJAG_01311","SJAG_05153","SJAG_03844","SJAG_01707","SJAG_03473","SJAG_04026","SJAG_01728","SJAG_00926","SJAG_04607","SJAG_04512","SJAG_03911","SJAG_04312","SJAG_01000","SJAG_01494","SJAG_02444","SJAG_00987","SJAG_02691","SJAG_02898","SJAG_04381","SJAG_02252","SJAG_03319","SJAG_03143","SJAG_00163","SJAG_02858","SJAG_03081","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97309],"is_not":false,"summary":null,"term":"GO:0045892"},{"annotations":[110012,102623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[104397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[85943,92387,109893,98101,88077,96004,114575,100584,101363,99860,95068,70547,88102,102182,105009,105925,87090,78920,73580,102872,103134,103116,107213,108638,73338,76120,109564,104669,89323,110892,73268,103444,89788,90786,95318,104399,89427,90113,100517,89261,75824,83748,99511,100415,87180,90702,102273,87162,71696,89929,105456,107647,99052,100277,114074,89828,83390,108654,103545,97228,102625,110461,90277,73615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[73258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[97229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[114644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[88611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031564"}]},"cv_name":"biological_process","definition":"Any 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transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of transcription, DNA-templated","type":"exact"},{"name":"transcription repressor activity","type":"related"}],"termid":"GO:0045892","terms_by_termid":{"GO:0000122":null,"GO:0000433":null,"GO:0010621":null,"GO:0016480":null,"GO:0031564":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: PBO:0027263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_elongated_multiseptate_cell","termid":"PBO:0027263"}


id: GO:0016679
data:
  {"annotated_genes":["SJAG_03490","SJAG_01490","SJAG_07006","SJAG_02646","SJAG_MIT03","SJAG_00601","SJAG_00755"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104390,110008,114867,115775,100403,100825,114395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.10.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"narrow"}],"termid":"GO:0016679","terms_by_termid":{"GO:0008121":null}}


id: PBO:0091792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Muk1","termid":"PBO:0091792"}


id: GO:0008276
data:
  {"annotated_genes":["SJAG_02271","SJAG_01079","SJAG_00769","SJAG_01536","SJAG_03869","SJAG_01054","SJAG_03630","SJAG_02659","SJAG_01146","SJAG_00286","SJAG_01261","SJAG_02756","SJAG_02467","SJAG_03949","SJAG_00943","SJAG_02873","SJAG_02692","SJAG_02868","SJAG_01425","SJAG_02350","SJAG_02660","SJAG_03228","SJAG_03548","SJAG_04574","SJAG_04159","SJAG_00508","SJAG_01482","SJAG_03487","SJAG_00596","SJAG_05016","SJAG_01193"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141133"},{"annotations":[114165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004164"},{"annotations":[74673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[72960,106671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[91576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[91577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[113194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[113239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[106968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[106969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[106970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[113733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[112088,110131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042054"},{"annotations":[76237,96829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071885"},{"annotations":[78856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[75344,102301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[74760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"},{"annotations":[109221,96636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"},{"annotations":[92595,91595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036009"},{"annotations":[83455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018064"},{"annotations":[75046,113531,83456,77398,73226,112089,70231,113879,76603,71933,74360,77288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016279"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group (CH3-) to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00508":null,"SJAG_00596":null,"SJAG_00769":null,"SJAG_00943":null,"SJAG_01054":null,"SJAG_01079":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_01261":null,"SJAG_01425":null,"SJAG_01482":null,"SJAG_01536":null,"SJAG_02271":null,"SJAG_02350":null,"SJAG_02467":null,"SJAG_02659":null,"SJAG_02660":null,"SJAG_02692":null,"SJAG_02756":null,"SJAG_02868":null,"SJAG_02873":null,"SJAG_03228":null,"SJAG_03487":null,"SJAG_03548":null,"SJAG_03630":null,"SJAG_03869":null,"SJAG_03949":null,"SJAG_04159":null,"SJAG_04574":null,"SJAG_05016":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9632182"],"synonyms":[{"name":"protein methylase activity","type":"exact"}],"termid":"GO:0008276","terms_by_termid":{"GO:0004164":null,"GO:0004671":null,"GO:0008469":null,"GO:0016279":null,"GO:0018064":null,"GO:0018423":null,"GO:0019702":null,"GO:0035242":null,"GO:0036009":null,"GO:0042054":null,"GO:0062122":null,"GO:0071885":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null,"GO:0141133":null,"GO:1990259":null}}


id: PBO:0028879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2B-K119_ubiquitination","termid":"PBO:0028879"}


id: PBO:0061671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 54","termid":"PBO:0061671"}


id: GO:0009728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a gibberellic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to gibberellin","termid":"GO:0009739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of gibberellic acid stimulus","synonyms":[{"name":"perception of gibberellic acid stimulus","type":"related"}],"termid":"GO:0009728"}


id: FYPO:0005634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister kinetochores become separated during the first meiotic nuclear division, and sister chromatids subsequently separate to result in equational segregation. Equational sister chromatid separation is caused by  bi-orientated attachment of sister chromatids.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I","termid":"FYPO:0005648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I with  equational sister chromatid  segregation in meiosis I","synonyms":[{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation and equational sister chromatid separation","type":"exact"},{"name":"abolished monopolar kinetochore attachment during meiosis I","type":"related"},{"name":"equational sister chromatid separation during first meiotic nuclear division","type":"exact"},{"name":"equational sister chromatid separation during meiosis I with split kinetochores","type":"related"},{"name":"equational sister chromatid separation in meiosis I","type":"exact"},{"name":"increased bi-orientated attachment of sister chromatids in meiosis I","type":"related"}],"termid":"FYPO:0005634"}


id: PBO:0078514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 7","termid":"PBO:0078514"}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: PBO:0088392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rsv2","termid":"PBO:0088392"}


id: PBO:0077670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF14 antisense RNA 1","termid":"PBO:0077670"}


id: PBO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 46","termid":"PBO:0050268"}


id: GO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of thymocyte death by apoptotic process.","definition_xrefs":["GOC:add","ISBN:0781765196","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte apoptotic process","synonyms":[{"name":"regulation of immature T cell apoptosis","type":"related"},{"name":"regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070243"}


id: PBO:0081750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 680","termid":"PBO:0081750"}


id: GO:0080076
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id: FYPO:0002716
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id: GO:0021743
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id: PBO:0086231
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with CCT (chaperonin containing TCP-1) complex; has a role in actin and tubulin folding; has weak similarity to phosducins, which are G-protein regulators","termid":"PBO:0086231"}


id: PBO:0063775
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id: GO:1903154
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any glucose transmembrane transporter activity that is involved in glucose import into cell.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","GOC:dos","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose transmembrane transporter activity involved in glucose import into cell (obsolete GO:1903154)","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity involved in glucose import into cell","type":"related"},{"name":"glucose permease activity involved in glucose import into cell","type":"exact"},{"name":"glucose transmembrane transporter activity involved in glucose import into cell","type":"exact"},{"name":"lactose/glucose efflux transporter activity involved in glucose import into cell","type":"narrow"}],"termid":"GO:1903154"}


id: SO:1000184
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant affecting splicing and causes an exon loss.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000184 sequence_variant_causes_exon_loss (obsolete SO:1000184)","synonyms":[{"name":"mutation causes exon loss","type":"related"},{"name":"sequence variant causes exon loss","type":"exact"}],"termid":"SO:1000184"}


id: PBO:0091289
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3H","termid":"PBO:0091289"}


id: PBO:0072621
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 6 homolog A","termid":"PBO:0072621"}


id: MOD:00290
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-histidine residue and a four-iron four-sulfur cluster to tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285","PubMed:7854413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S)","type":"exact"},{"name":"METAL Iron-sulfur (4Fe-4S); via pros nitrogen","type":"exact"},{"name":"tetra-mu3-sulfidotris(S-cysteinyliron)(N3'-histidinoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-N3'-histidino tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00290"}


id: PBO:0050352
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 55","termid":"PBO:0050352"}


id: GO:1901526
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id: PBO:0050192
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: PBO:0070577
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 43","termid":"PBO:0070577"}


id: PBO:0061718
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2B antisense RNA 1","termid":"PBO:0061718"}


id: GO:0141129
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id: PBO:0068618
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 70, pseudogene","termid":"PBO:0068618"}


id: PR:O43036
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpa43 gene.","definition_xrefs":["UniProtKB:O43036","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.07c","synonyms":[{"name":"DNA-dependent RNA polymerase 19 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A43 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpa43","type":"exact"}],"termid":"PR:O43036"}


id: PBO:0066312
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 6","termid":"PBO:0066312"}


id: PBO:0077500
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 218","termid":"PBO:0077500"}


id: GO:1990676
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id: GO:0019020
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of more than three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete multipartite viral genome (obsolete GO:0019020)","termid":"GO:0019020"}


id: PBO:0061748
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1 pseudogene 1","termid":"PBO:0061748"}


id: PR:O60146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- can1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C18H10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.16","synonyms":[{"name":"Spom972h-can1","type":"exact"}],"termid":"PR:O60146"}


id: PBO:0017069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, DNAJ domain","termid":"PBO:0017069"}


id: PBO:0040764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 2","termid":"PBO:0040764"}


id: GO:0051452
data:
  {"annotated_genes":["SJAG_02023","SJAG_05294","SJAG_01913","SJAG_04955","SJAG_01397","SJAG_00516","SJAG_04616","SJAG_01817","SJAG_00301","SJAG_02716","SJAG_00212","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007042"},{"annotations":[72707,100229,72366,71023,73518,77342,96215,83849,78733,91750,97883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that reduces the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular pH","termid":"GO:0051453"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02716":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular pH reduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell pH reduction","type":"exact"},{"name":"cellular acidification","type":"exact"},{"name":"intracellular acidification","type":"related"},{"name":"reduction of cellular pH","type":"exact"},{"name":"reduction of pH in cell","type":"exact"}],"termid":"GO:0051452","terms_by_termid":{"GO:0007035":null,"GO:0007042":null}}


id: GO:0010137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ureide, the organic form of nitrogen in nitrogen fixing and transporting plants, from IMP, which is synthesized de novo during nitrogen fixation by roots.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureide metabolic process","termid":"GO:0010135"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureide biosynthetic process","secondary_identifiers":["MetaCyc:URSIN-PWY"],"synonyms":[{"name":"ureide anabolism","type":"exact"},{"name":"ureide biosynthesis","type":"exact"},{"name":"ureide formation","type":"exact"},{"name":"ureide synthesis","type":"exact"}],"termid":"GO:0010137"}


id: GO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine modification","termid":"GO:0018198"}


id: FYPO:0006452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed processivity of a histone H3 acetyltransferase activity is lower than normal. Processivity refers to the number of methylation reactions catalyzed (methyl residues added) per histone binding event.","definition_xrefs":["PomBase:mah","PMID:26401015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0005447","FYPO:0000641","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased histone H3 acetyltransferase processivity","synonyms":[{"name":"decreased H3 histone acetyltransferase processivity","type":"exact"},{"name":"reduced histone H3 acetyltransferase processivity","type":"exact"}],"termid":"FYPO:0006452"}


id: PBO:0090663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mmtag2 ortholog, implicated in splicing","termid":"PBO:0090663"}


id: PBO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 5","termid":"PBO:0071382"}


id: GO:0061182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of chondrocyte differentiation","termid":"GO:0032331"},{"relation_name":"is_a","term_name":"regulation of chondrocyte development","termid":"GO:0061181"},{"relation_name":"negatively_regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte development","termid":"GO:0061182"}


id: PBO:0055285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2712","termid":"PBO:0055285"}


id: GO:0006814
data:
  {"annotated_genes":["SJAG_01541","SJAG_04028","SJAG_04167","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[85187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098719"},{"annotations":[61149,67279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"}]},"cv_name":"biological_process","definition":"The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sodium ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006834","GO:0016974"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium channel auxiliary protein activity","type":"related"},{"name":"sodium transport","type":"exact"},{"name":"sodium/potassium transport","type":"broad"},{"name":"sodium:calcium exchange","type":"narrow"},{"name":"sodium:solute transport","type":"narrow"}],"termid":"GO:0006814","terms_by_termid":{"GO:0035725":null,"GO:0036376":null,"GO:0098719":null}}


id: GO:1901776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mitomycin C.","definition_xrefs":["GOC:yaf","PMID:10099135","PMID:10094699","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"quinone catabolic process","termid":"GO:1901662"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"mitomycin C catabolic process","synonyms":[{"name":"mitomycin C breakdown","type":"exact"},{"name":"mitomycin C catabolism","type":"exact"},{"name":"mitomycin C degradation","type":"exact"}],"termid":"GO:1901776"}


id: PBO:0058516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5704","termid":"PBO:0058516"}


id: PBO:0083656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceIII; encoded by a mobile group I intron within the mitochondrial COX1 gene","termid":"PBO:0083656"}


id: GO:0006335
data:
  {"annotated_genes":["SJAG_02439","SJAG_02198","SJAG_04272","SJAG_04038","SJAG_03128","SJAG_03366","SJAG_02416","SJAG_03033","SJAG_04547"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73960,78411,85957,90892,91148,97799,104149,107781,110215],"is_not":false,"summary":null,"term":"GO:0006335"}]},"cv_name":"biological_process","definition":"The formation of nucleosomes on newly synthesized DNA, coupled to strand elongation.","definition_xrefs":["GOC:mah","PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_03033":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_04038":null,"SJAG_04272":null,"SJAG_04547":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA replication-dependent chromatin assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0034723"],"synonyms":[{"name":"DNA replication-dependent chromatin organization","type":"related"},{"name":"DNA replication-dependent nucleosome assembly","type":"broad"},{"name":"DNA replication-dependent nucleosome organisation","type":"related"},{"name":"DNA replication-dependent nucleosome organization","type":"related"}],"termid":"GO:0006335","terms_by_termid":{"GO:0006335":null}}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: PR:Q76PD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1223.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q76PD2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase hel2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.01","synonyms":[{"name":"Spom972h-SPCC1223.01","type":"exact"},{"name":"histone E3 ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q76PD2"}


id: PBO:0049561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 27, pseudogene","termid":"PBO:0049561"}


id: GO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxygen (O2) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gas transport","termid":"GO:0015669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oxygen transport","termid":"GO:0015671"}


id: PBO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L family member 3, pseudogene","termid":"PBO:0044202"}


id: PBO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 28","termid":"PBO:0071487"}


id: PBO:0075748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF protein kinase 1","termid":"PBO:0075748"}


id: GO:1904056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"positively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholangiocyte proliferation","synonyms":[{"name":"activation of cholangiocyte proliferation","type":"narrow"},{"name":"activation of hepatoblast proliferation","type":"narrow"},{"name":"positive regulation of hepatoblast proliferation","type":"exact"},{"name":"up regulation of cholangiocyte proliferation","type":"exact"},{"name":"up regulation of hepatoblast proliferation","type":"exact"},{"name":"up-regulation of cholangiocyte proliferation","type":"exact"},{"name":"up-regulation of hepatoblast proliferation","type":"exact"},{"name":"upregulation of cholangiocyte proliferation","type":"exact"},{"name":"upregulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904056"}


id: GO:0050084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + H2O = D-mannitol + 2 H+ + phosphate.","definition_xrefs":["EC:3.1.3.22","RHEA:19537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"mannitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02167","MetaCyc:MANNITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"D-mannitol-1-phosphate phosphohydrolase activity","type":"related"},{"name":"mannitol-1-phosphate phosphatase activity","type":"related"}],"termid":"GO:0050084"}


id: GO:1904070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ascaroside.","definition_xrefs":["PMID:25775534","GOC:TermGenie","GO_REF:0000068","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"ascaroside metabolic process","termid":"GO:1904069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside biosynthetic process","synonyms":[{"name":"ascaroside anabolism","type":"exact"},{"name":"ascaroside biosynthesis","type":"exact"},{"name":"ascaroside formation","type":"exact"},{"name":"ascaroside synthesis","type":"exact"}],"termid":"GO:1904070"}


id: GO:0008963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine + undecaprenyl phosphate = UMP + N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine-diphosphoundecaprenol.","definition_xrefs":["EC:2.7.8.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phospho-N-acetylmuramoyl-pentapeptide-transferase activity","secondary_identifiers":["MetaCyc:RXN-8975","RHEA:21920"],"synonyms":[{"name":"MraY transferase activity","type":"narrow"},{"name":"UDP-MurAc(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala):undecaprenyl-phosphate phospho-N-acetylmuramoyl-pentapeptide-transferase activity","type":"related"},{"name":"UDP-MurNAc-Ala-gamma-DGlu-Lys-DAla-DAla:undecaprenylphosphate transferase activity","type":"related"},{"name":"UDP-MurNAc-Ala-gammaDGlu-Lys-DAla-DAla:undecaprenylphosphate transferase activity","type":"related"},{"name":"UDP-MurNAc-L-Ala-D-gamma-Glu-L-Lys-D-Ala-D-Ala:C(55)-isoprenoid alcohol transferase activity","type":"related"},{"name":"UDP-MurNAc-L-Ala-D-gamma-Glu-L-Lys-D-Ala-D-Ala:C55-isoprenoid alcohol transferase activity","type":"related"},{"name":"UDP-MurNAc-pentapeptide phosphotransferase activity","type":"related"},{"name":"phospho-MurNAc-pentapeptide transferase activity","type":"related"},{"name":"phospho-N-acetylmuramoyl pentapeptide translocase activity","type":"related"},{"name":"phospho-NAc-muramoyl-pentapeptide translocase (UMP) activity","type":"related"},{"name":"phosphoacetylmuramoylpentapeptide translocase activity","type":"related"},{"name":"phosphoacetylmuramoylpentapeptidetransferase activity","type":"related"}],"termid":"GO:0008963"}


id: PBO:0110563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine hydroxylase","termid":"PBO:0110563"}


id: PBO:0075627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein","termid":"PBO:0075627"}


id: FYPO:0004688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free large ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cytosolic large ribosomal subunit level","synonyms":[{"name":"cytosolic large ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 60S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic large ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic large ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased large ribosomal subunit level","type":"broad"},{"name":"decreased level of cytosolic large ribosomal subunits","type":"related"},{"name":"reduced cytosolic large ribosomal subunit level","type":"exact"}],"termid":"FYPO:0004688"}


id: GO:0050770
data:
  {"annotated_genes":["SJAG_02566","SJAG_04232","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100014],"is_not":false,"summary":null,"term":"GO:0050770"},{"annotations":[114527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048671"},{"annotations":[97999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045773"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02566":null,"SJAG_04232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axonogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0050770","terms_by_termid":{"GO:0045773":null,"GO:0048671":null,"GO:0050770":null}}


id: GO:0071434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of angiotensin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to angiotensin","synonyms":[{"name":"angiotensin mediated chemotaxis","type":"broad"},{"name":"angiotensin-mediated cell chemotaxis","type":"exact"}],"termid":"GO:0071434"}


id: GO:0018927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine and threonine metabolic process (obsolete GO:0018927)","synonyms":[{"name":"methionine and threonine metabolic process","type":"exact"}],"termid":"GO:0018927"}


id: GO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1234166","Reactome:R-HSA-1234177","Reactome:R-HSA-1234179","Reactome:R-HSA-1234173","RHEA:63484","Reactome:R-HSA-1234165","Reactome:R-HSA-1234181"],"synonyms":[{"name":"HIF-type prolyl 4-hydroxylase","type":"narrow"},{"name":"prolyl 4-hydroxylase","type":"broad"}],"termid":"GO:0031545"}


id: PBO:0038551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 6","termid":"PBO:0038551"}


id: GO:0035310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a notum cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum cell fate specification","termid":"GO:0035310"}


id: MOD:01849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["PubMed:20805503","RESID:AA0204#CYS2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Cys)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Cys-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01849"}


id: PBO:0079514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine phosphorylase","termid":"PBO:0079514"}


id: FYPO:0006564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to ethanol when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of ethanol that allows wild type cells to grow.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ethanol in stationary phase","synonyms":[{"name":"decreased cell population growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"decreased growth during cellular response to ethanol in stationary phase","type":"exact"},{"name":"hypersensitive to ethanol in stationary phase","type":"exact"},{"name":"sensitive to ethanol during stationary phase","type":"exact"},{"name":"sensitive to ethyl alcohol in stationary phase","type":"exact"}],"termid":"FYPO:0006564"}


id: _global:lost
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X lost Y if X is a variant_of X' and Y part of X' but not X.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lost","termid":"_global:lost"}


id: FYPO:0001943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abnormal microtubule binding","termid":"FYPO:0001943"}


id: PBO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XII","termid":"PBO:0046812"}


id: PBO:0029480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_ester_level","termid":"PBO:0029480"}


id: GO:0009354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of succinyl-CoA to dihydrolipoamide to form S-succinyldihydrolipoamide. The enzyme is a component of the multienzyme 2-oxoglutarate dehydrogenase complex.","definition_xrefs":["EC:2.3.1.61"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide S-succinyltransferase complex (obsolete GO:0009354)","synonyms":[{"name":"dihydrolipoamide S-succinyltransferase complex","type":"exact"}],"termid":"GO:0009354"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: SO:1000069
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of two nucleotides.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000069 sequence_variant_causing_minus_2_frameshift (obsolete SO:1000069)","synonyms":[{"name":"minus 2 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 2 frameshift","type":"exact"}],"termid":"SO:1000069"}


id: CHEBI:16467
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid that is the L-isomer of arginine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine","termid":"CHEBI:16467"}


id: GO:0010917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or extent of a mitochondrial membrane potential, the electric potential existing across any mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane potential","termid":"GO:0045837"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane potential","synonyms":[{"name":"reduction of mitochondrial membrane potential","type":"exact"}],"termid":"GO:0010917"}


id: FYPO:0000810
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115901,116081,116079,116074],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[115886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003973"},{"annotations":[115902,116116,116276,116269,116268,116108,116109,116275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[116165,116173,116157,116161,116170,116158],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115961],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus organization is abnormal. Nucleus organization results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["PomBase:mah","GO:0006997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01374":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04284":null,"SJAG_04464":null,"SJAG_05207":null},"genotype_count":17,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nucleus organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_01374","SJAG_04464","SJAG_05207","SJAG_01242","SJAG_03891","SJAG_03940","SJAG_01745","SJAG_01906","SJAG_04284","SJAG_03892","SJAG_02763"],"single_locus_genotype_uniquenames":["vps4delta","nup132delta","nem1delta","vps32delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ned1delta","nem2delta","cmp7delta","lem2delta","nup61delta","alx1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal nuclear organization","type":"exact"},{"name":"abnormal nucleus organisation","type":"exact"},{"name":"abnormal nucleus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000810","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900921"],"synonyms":[{"name":"down regulation of L-glutamate import","type":"exact"},{"name":"down regulation of L-glutamate transport","type":"broad"},{"name":"down regulation of L-glutamate uptake","type":"related"},{"name":"down-regulation of L-glutamate import","type":"exact"},{"name":"down-regulation of L-glutamate transport","type":"broad"},{"name":"down-regulation of L-glutamate uptake","type":"related"},{"name":"downregulation of L-glutamate import","type":"exact"},{"name":"downregulation of L-glutamate transport","type":"broad"},{"name":"downregulation of L-glutamate uptake","type":"related"},{"name":"inhibition of L-glutamate import","type":"narrow"},{"name":"inhibition of L-glutamate transport","type":"narrow"},{"name":"inhibition of L-glutamate uptake","type":"narrow"},{"name":"negative regulation of L-glutamate import","type":"broad"},{"name":"negative regulation of L-glutamate transport","type":"broad"},{"name":"negative regulation of L-glutamate uptake","type":"related"},{"name":"regulation of L-glutamate import","type":"broad"}],"termid":"GO:0002037"}


id: PBO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40","termid":"PBO:0090189"}


id: GO:1902442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ripoptosome assembly involved in a necroptotic process.","definition_xrefs":["PMID:21052097","GOC:TermGenie","GOC:mtg_apoptosis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"ripoptosome assembly involved in necroptotic process","termid":"GO:1901026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of ripoptosome assembly involved in necroptotic process","synonyms":[{"name":"regulation of ripoptosome assembly involved in necroptosis","type":"narrow"}],"termid":"GO:1902442"}


id: GO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-lactate + GTP = 2-phospho-(S)-lactate + GDP.","definition_xrefs":["PMID:11535063"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-lactate 2-kinase activity (obsolete GO:0043841)","synonyms":[{"name":"lactate 2-kinase activity","type":"exact"}],"termid":"GO:0043841"}


id: GO:0017090
data:
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id: PBO:0026886
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id: GO:0032502
data:
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id: SO:1000111
data:
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id: FYPO:0003907
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id: PBO:0057515
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id: GO:0005869
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id: GO:0006104
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id: GO:0062134
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id: GO:0052817
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very long-chain fatty acyl-CoA + H2O = a very long-chain fatty acid + CoA + H+. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["RHEA:67072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"very long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"very long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"very long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"very long-chain hydrolase activity","type":"related"},{"name":"very long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052817"}


id: PR:Q9HDY7
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id: GO:0032918
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83206],"is_not":false,"summary":null,"term":"GO:0032918"}]},"cv_name":"biological_process","definition":"The modification of spermidine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine acetylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032918","terms_by_termid":{"GO:0032918":null}}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: GO:0150074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:26670206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150074"}


id: GO:0019056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of its host's transcription.","definition_xrefs":["PMID:7799962"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host transcription (obsolete GO:0019056)","synonyms":[{"name":"modification of host transcription","type":"exact"},{"name":"modulation by virus of host transcription","type":"narrow"},{"name":"perturbation of host cell transcription","type":"exact"}],"termid":"GO:0019056"}


id: PBO:0040940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 11","termid":"PBO:0040940"}


id: PBO:0059250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L19","termid":"PBO:0059250"}


id: PBO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_M_phase","termid":"PBO:0031606"}


id: GO:0061929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epsilon-(L-gamma-glutamyl)-L-lysine = L-lysine + 5-oxo-L-proline.","definition_xrefs":["PMID:6107907","PMID:20110353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamylaminecyclotransferase activity","secondary_identifiers":["EC:4.3.2.8","RHEA:16961"],"termid":"GO:0061929"}


id: PBO:0048957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit alpha","termid":"PBO:0048957"}


id: PR:Q09826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sds23/moc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.13","synonyms":[{"name":"Spom972h-sds23","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphoprotein at stationary phase 1 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09826"}


id: GO:0098771
data:
  {"annotated_genes":["SJAG_02834","SJAG_02019","SJAG_00822","SJAG_04675","SJAG_04677","SJAG_03631","SJAG_04757","SJAG_03866","SJAG_02474","SJAG_04028","SJAG_01803","SJAG_00532","SJAG_01990","SJAG_02457","SJAG_04867","SJAG_02883","SJAG_04760","SJAG_05325","SJAG_04975","SJAG_02578","SJAG_03401","SJAG_01400","SJAG_00244","SJAG_03516","SJAG_04743","SJAG_03519","SJAG_03850","SJAG_02532","SJAG_04584","SJAG_04403","SJAG_04242","SJAG_01007","SJAG_03644","SJAG_01004","SJAG_00668","SJAG_03528","SJAG_01435","SJAG_02399","SJAG_03862","SJAG_01541","SJAG_02735","SJAG_00802","SJAG_04032","SJAG_00328","SJAG_04031","SJAG_04111","SJAG_01078","SJAG_04698","SJAG_04607","SJAG_00232","SJAG_00923","SJAG_03879","SJAG_01353","SJAG_01694","SJAG_00222","SJAG_04870","SJAG_04892","SJAG_04167","SJAG_02847","SJAG_04096","SJAG_00792","SJAG_03793","SJAG_02080"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90156,100100,88415,90148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[102059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"},{"annotations":[70691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[77154,70419,109966,115293,71526,71049,72239,73060,78721,92934,73334,94266,74491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[89159,74397,96356,76951,104277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[110508,74274,74398,100583,90111,88259,71151,76952,73750,77041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[70354,73924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[73192,70426,74913,96428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[111242,111694,84556,98860,98862,98861,103989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"},{"annotations":[91527,77191,70626,72190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[73194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[73721,89818,89819,77178,90785,110974,100643,72538,96357,74049,99879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[88412,88416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[113686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[102060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[88417,109362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[97875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051480"},{"annotations":[107276,107275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of inorganic ions within an organism or cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical 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ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098771","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006880":null,"GO:0006882":null,"GO:0010106":null,"GO:0010960":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030643":null,"GO:0032468":null,"GO:0033214":null,"GO:0033215":null,"GO:0051480":null,"GO:0055064":null,"GO:0055075":null,"GO:0098711":null}}


id: GO:0090066
data:
  {"annotated_genes":["SJAG_04668","SJAG_00279","SJAG_00521","SJAG_03401","SJAG_00409","SJAG_03655","SJAG_04479","SJAG_03086","SJAG_02532","SJAG_02019","SJAG_01805","SJAG_02700","SJAG_04703","SJAG_04100","SJAG_01943","SJAG_04332","SJAG_04232","SJAG_01894","SJAG_02566","SJAG_04982","SJAG_01993","SJAG_03229"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88282,77883,78738,115355,88473,101061,75064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[91778,110558,102058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[102879,88368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[114527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048671"},{"annotations":[97999],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045773"},{"annotations":[89848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[106570,78119,76250,86576,101510,98001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[90609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[72078,75069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the size of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00409":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03229":null,"SJAG_03401":null,"SJAG_03655":null,"SJAG_04100":null,"SJAG_04232":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anatomical structure size","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090066","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0042989":null,"GO:0045773":null,"GO:0045793":null,"GO:0048671":null,"GO:0051016":null}}


id: FYPO:0000190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal actin cortical patch localization during vegetative growth","synonyms":[{"name":"abnormal F-actin patch localization during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch location during vegetative growth","type":"related"},{"name":"abnormal actin patch localization during vegetative growth","type":"exact"}],"termid":"FYPO:0000190"}


id: GO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"negative regulation of non-REM sleep","type":"exact"}],"termid":"GO:0042323"}


id: FYPO:0002905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000723","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere maintenance","synonyms":[{"name":"normal telomere maintenance during mitotic cell cycle","type":"related"},{"name":"normal telomere maintenance during vegetative growth","type":"exact"}],"termid":"FYPO:0002905"}


id: PBO:0074871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 54","termid":"PBO:0074871"}


id: GO:0039579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont inhibits or disrupts a host ubiquitin-like protein ISG15 conjugation to a susbtrate. ISG15 is a ubiquitin-like protein that is conjugated to lysine residues on various target proteins. For example, some viruses escape the antiviral activity of ISG15 by using different mechanisms; the influenza B virus NS1 protein blocks the covalent linkage of ISG15 to its target proteins by directly interacting with ISG15, while the papain-like protease from the coronavirus cleaves ISG15 derivatives.","definition_xrefs":["PMID:18604270","PMID:11157743","PMID:32845033","PMID:18078692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ISG15-protein conjugation","synonyms":[{"name":"suppression by virus of host ISG15 activity","type":"related"},{"name":"suppression by virus of host ISG15-protein conjugation","type":"narrow"}],"termid":"GO:0039579"}


id: PBO:0087345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphinganine C4-hydroxylase; catalyses the conversion of sphinganine to phytosphingosine in sphingolipid biosyntheis","termid":"PBO:0087345"}


id: GO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon metabolic process","synonyms":[{"name":"halogenated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042197"}


id: PBO:0076668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 1 pseudogene 1","termid":"PBO:0076668"}


id: PBO:0049709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 3","termid":"PBO:0049709"}


id: PBO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Met11","termid":"PBO:0001096"}


id: PBO:0079229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 6","termid":"PBO:0079229"}


id: MOD:00942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (1)H protium atoms with four (2)H deuterium atoms to produce (4,4,5,5-(2)H4)-L-lysine.","definition_xrefs":["Unimod:481","OMSSA:180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium tetrasubstituted residue","termid":"MOD:00837"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(4,4,5,5-(2)H4)-L-lysine","synonyms":[{"name":"4,4,5,5-D4 Lysine","type":"related"},{"name":"4,4,5,5-tetradeuterolysine","type":"exact"},{"name":"Label:2H(4)","type":"related"},{"name":"lys-2H4","type":"exact"}],"termid":"MOD:00942"}


id: GO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stabilization of the structure of beta-galactosidase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosidase stabilization activity (obsolete GO:0017030)","synonyms":[{"name":"beta-galactosidase stabilization activity","type":"exact"}],"termid":"GO:0017030"}


id: PBO:0040687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 antisense RNA 1","termid":"PBO:0040687"}


id: PBO:0063947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINK1 antisense RNA","termid":"PBO:0063947"}


id: _global:causally_upstream_of_or_within,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_positive_effect","secondary_identifiers":["RO:0004047"],"termid":"_global:causally_upstream_of_or_within,_positive_effect"}


id: PBO:0087644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the glycosylphosphatidylinositol transamidase complex; involved in the addition of GPIs to newly synthesized proteins; luminally-oriented, type I integral membrane glycoprotein of the ER; human PIG-T homolog","termid":"PBO:0087644"}


id: GO:1902852
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear migration during mitotic telophase.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear migration along microtubule","termid":"GO:1902838"},{"relation_name":"regulates","term_name":"nuclear migration during mitotic telophase","termid":"GO:0090561"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902852","terms_by_termid":{"GO:1902854":null}}


id: PBO:0085565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase; multifunctional oxidoreductase of the ER lumen, essential for disulfide bond formation in secretory and cell-surface proteins, processing of non-native disulfide bonds; Ero1p activator; complexes with exomannosidase, Mnl1p to facilitate the recognition of misfolded glycoproteins and the trimming of glycan Man8GlcNAc2 to Man7GlcNAc2 on substrates, thereby accelerating ERAD; PDI1 has a paralog, EUG1, that arose from the whole genome duplication","termid":"PBO:0085565"}


id: PBO:0043995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 pseudogene 2","termid":"PBO:0043995"}


id: GO:0032350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone metabolic process","synonyms":[{"name":"regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032350"}


id: GO:0035767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000115","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis","termid":"GO:0035767"}


id: PBO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine","termid":"PBO:0001020"}


id: PBO:0041066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein","termid":"PBO:0041066"}


id: SO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one V-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_cluster","synonyms":[{"name":"V cluster","type":"exact"},{"name":"V-CLUSTER","type":"exact"}],"termid":"SO:0000526"}


id: GO:0004937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of alpha1-adrenergic receptors; the activity involves transmitting the signal to the Gq alpha subunit of a heterotrimeric G protein.","definition_xrefs":["IUPHAR_GPCR:1274","GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-adrenergic receptor activity","termid":"GO:0004936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"alpha1-adrenergic receptor activity","synonyms":[{"name":"alpha1 adrenoceptor","type":"exact"}],"termid":"GO:0004937"}


id: GO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoin = 2 benzaldehyde.","definition_xrefs":["RHEA:21460","EC:4.1.2.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"benzoin aldolase activity","secondary_identifiers":["KEGG_REACTION:R00027","MetaCyc:BENZOIN-ALDOLASE-RXN"],"synonyms":[{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2- activity","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase (benzaldehyde-forming)","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase activity","type":"related"},{"name":"benzaldehyde lyase activity","type":"related"},{"name":"diphenylethanone benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0047695"}


id: GO:0120059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"negatively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small intestinal transit","synonyms":[{"name":"negative regulation of small bowel transit","type":"exact"},{"name":"negative regulation of small intestine transit","type":"exact"}],"termid":"GO:0120059"}


id: PBO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_vector_for","termid":"PBO:0034150"}


id: PBO:0044925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase beta","termid":"PBO:0044925"}


id: GO:0009800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"cinnamic acid biosynthetic process","synonyms":[{"name":"cinnamic acid anabolism","type":"exact"},{"name":"cinnamic acid biosynthesis","type":"exact"},{"name":"cinnamic acid formation","type":"exact"},{"name":"cinnamic acid synthesis","type":"exact"},{"name":"cinnamylic acid biosynthesis","type":"exact"},{"name":"cinnamylic acid biosynthetic process","type":"exact"},{"name":"phenylacrylic acid biosynthesis","type":"exact"},{"name":"phenylacrylic acid biosynthetic process","type":"exact"},{"name":"phenylpropenoic acid biosynthesis","type":"exact"},{"name":"phenylpropenoic acid biosynthetic process","type":"exact"}],"termid":"GO:0009800"}


id: FYPO:0002386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"deceased protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"decreased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to heterochromatin at pericentric region","type":"related"},{"name":"decreased protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"reduced protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002386"}


id: PBO:0070420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase","termid":"PBO:0070420"}


id: GO:0048066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the deposition of coloring matter in an organism, tissue or cell.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental pigmentation","synonyms":[{"name":"pigmentation during development","type":"related"}],"termid":"GO:0048066"}


id: GO:0000183
data:
  {"annotated_genes":["SJAG_03255","SJAG_04576","SJAG_00883","SJAG_01579","SJAG_03844","SJAG_03183","SJAG_02723","SJAG_01075","SJAG_00934","SJAG_03982","SJAG_02778","SJAG_03713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88016,94573,100417,103634,104593,108656,109896,111061,113167],"is_not":false,"summary":null,"term":"GO:0000183"},{"annotations":[76301,106948,103034],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin at ribosomal DNA, characterized by the modified histone H3K9me3.","definition_xrefs":["PMID:10219245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03183":null,"SJAG_03255":null,"SJAG_03713":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_04576":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin silencing at rDNA","type":"related"},{"name":"chromatin silencing at ribosomal DNA","type":"broad"},{"name":"heterochromatic silencing at rDNA","type":"broad"},{"name":"rDNA chromatin silencing","type":"broad"},{"name":"rDNA heterochromatin assembly","type":"exact"}],"termid":"GO:0000183","terms_by_termid":{"GO:0000183":null,"GO:0061188":null}}


id: PBO:0052449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF3 antisense RNA 1","termid":"PBO:0052449"}


id: PBO:0089148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA:L-glutamate N-acetyltransferase","termid":"PBO:0089148"}


id: PBO:0026887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation_with_lagging_chromosomes,_complete_sister_chromatid_separation,_and_decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0026887"}


id: GO:0000920
data:
  {"annotated_genes":["SJAG_02753","SJAG_03444","SJAG_04912","SJAG_04938","SJAG_01436","SJAG_02366","SJAG_01774","SJAG_00996","SJAG_00667","SJAG_02022","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88104,91759,107118,107971,112316],"is_not":false,"summary":null,"term":"GO:0000920"},{"annotations":[116236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030995"},{"annotations":[85608,104380],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001043"},{"annotations":[96345,85609],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030994"},{"annotations":[104383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905391"},{"annotations":[97240,89895],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010590"}]},"cv_name":"biological_process","definition":"The process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"cell division","termid":"GO:0051301"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00996":null,"SJAG_01436":null,"SJAG_01774":null,"SJAG_02022":null,"SJAG_02366":null,"SJAG_02645":null,"SJAG_02753":null,"SJAG_03444":null,"SJAG_04912":null,"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24699070":null},"secondary_identifiers":["GO:2000695","GO:1902409"],"synonyms":[{"name":"cell separation after cytokinesis","type":"related"},{"name":"cell separation following cytokinesis","type":"exact"},{"name":"cytokinetic cell separation","type":"related"},{"name":"daughter cell separation","type":"related"},{"name":"mitotic cytokinetic cell separation","type":"broad"}],"termid":"GO:0000920","terms_by_termid":{"GO:0000920":null,"GO:0010590":null,"GO:0030994":null,"GO:0030995":null,"GO:1905391":null,"GO:2001043":null}}


id: GO:0141010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism mediated by RNA-directed DNA methylation. RNA-directed DNA methylation is a gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32719317","PMID:28633017","PMID:32381626","PMID:36570931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene silencing by RNA-directed DNA methylation","termid":"GO:0080188"},{"relation_name":"is_a","term_name":"retrotransposon silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"retrotransposon silencing by RNA-directed DNA methylation","synonyms":[{"name":"retrostransposon silencing by RdDM","type":"exact"}],"termid":"GO:0141010"}


id: GO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + ent-kaur-16-en-19-ol + oxygen = 2 H2O + NADP+ + ent-kaur-16-en-19-al.","definition_xrefs":["MetaCyc:RXN-5242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ent-kaur-16-en-19-ol oxidase activity","secondary_identifiers":["RHEA:21304","EC:1.14.14.86"],"termid":"GO:0052616"}


id: PBO:0036080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin,_incomplete_primary_cell_septum","termid":"PBO:0036080"}


id: PBO:0109310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 2B, pseudogene","termid":"PBO:0109310"}


id: PBO:0071421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 27","termid":"PBO:0071421"}


id: GO:0030036
data:
  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id: FYPO:0006849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of RNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased total RNA level during vegetative growth","synonyms":[{"name":"increased total RNA accumulation during vegetative growth","type":"related"},{"name":"increased total RNA content during vegetative growth","type":"exact"},{"name":"increased total RNA level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006849"}


id: GO:0090549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.","definition_xrefs":["GOC:tair_curators","PMID:18245858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon starvation","termid":"GO:0090549"}


id: PBO:0068190
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 497","termid":"PBO:0068190"}


id: CHEBI:16811
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  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine","termid":"CHEBI:16811"}


id: GO:0010979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of vitamin D 24-hydroxylase activity. Vitamin D 24-hydroxylase activity catalyzes the hydroxylation of C-24 of any form of vitamin D.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitamin D 24-hydroxylase activity","termid":"GO:0010979"}


id: PBO:0079802
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B17","termid":"PBO:0079802"}


id: MOD:01765
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01765"}


id: GO:0009650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV.","definition_xrefs":["GOC:ml","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"UV protection","synonyms":[{"name":"UV resistance","type":"related"},{"name":"UV tolerance","type":"related"},{"name":"ultraviolet protection","type":"exact"},{"name":"ultraviolet resistance","type":"related"},{"name":"ultraviolet tolerance","type":"related"}],"termid":"GO:0009650"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: GO:1901557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fenofibrate stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fenofibrate","termid":"GO:1901557"}


id: PBO:0089113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock factor (HSF)-type, DNA-binding","termid":"PBO:0089113"}


id: PBO:0085863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has an apparent role in acetylation of N-terminal methionine residues","termid":"PBO:0085863"}


id: PBO:0050519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D4","termid":"PBO:0050519"}


id: GO:0005154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an epidermal growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"epidermal growth factor receptor binding","secondary_identifiers":["GO:0008185"],"synonyms":[{"name":"EGF","type":"narrow"},{"name":"EGF receptor binding","type":"exact"},{"name":"EGF receptor ligand","type":"narrow"},{"name":"EGFR binding","type":"exact"},{"name":"TGF-alpha receptor binding","type":"exact"},{"name":"TGFalpha receptor binding","type":"exact"},{"name":"epidermal growth factor","type":"narrow"},{"name":"epidermal growth factor receptor ligand","type":"narrow"},{"name":"transforming growth factor alpha","type":"narrow"},{"name":"transforming growth factor alpha receptor binding","type":"exact"},{"name":"transforming growth factor alpha receptor ligand","type":"narrow"}],"termid":"GO:0005154"}


id: PBO:0058177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4472-1","termid":"PBO:0058177"}


id: PBO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_deubiquitination_following_cellular_response_to_methyl_methanesulfonate_during_vegetative_growth","termid":"PBO:0035783"}


id: PBO:0044618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin, CUB and LCCL domain containing 1","termid":"PBO:0044618"}


id: PBO:0044575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBH antisense RNA 1","termid":"PBO:0044575"}


id: _global:has_regulatory_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A 'has regulatory component activity' B if A and B are GO molecular functions (GO_0003674), A has_component B and A is regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"_global:has_component_activity"},{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulatory_component_activity","secondary_identifiers":["RO:0002013"],"termid":"_global:has_regulatory_component_activity"}


id: GO:1900693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of (+)-kotanin biosynthetic process","termid":"GO:1900692"},{"relation_name":"negatively_regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"down regulation of (+)-kotanin anabolism","type":"exact"},{"name":"down regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"down regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"down regulation of (+)-kotanin formation","type":"exact"},{"name":"down regulation of (+)-kotanin synthesis","type":"exact"},{"name":"down-regulation of (+)-kotanin anabolism","type":"exact"},{"name":"down-regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"down-regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"down-regulation of (+)-kotanin formation","type":"exact"},{"name":"down-regulation of (+)-kotanin synthesis","type":"exact"},{"name":"downregulation of (+)-kotanin anabolism","type":"exact"},{"name":"downregulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"downregulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"downregulation of (+)-kotanin formation","type":"exact"},{"name":"downregulation of (+)-kotanin synthesis","type":"exact"},{"name":"inhibition of (+)-kotanin anabolism","type":"exact"},{"name":"inhibition of (+)-kotanin biosynthesis","type":"exact"},{"name":"inhibition of (+)-kotanin biosynthetic process","type":"narrow"},{"name":"inhibition of (+)-kotanin formation","type":"exact"},{"name":"inhibition of (+)-kotanin synthesis","type":"exact"},{"name":"negative regulation of (+)-kotanin anabolism","type":"exact"},{"name":"negative regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"negative regulation of (+)-kotanin formation","type":"exact"},{"name":"negative regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900693"}


id: PR:O42996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C27B12.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.05","synonyms":[{"name":"Spom972h-SPBC27B12.05","type":"exact"}],"termid":"PR:O42996"}


id: GO:0098640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any integrin binding that occurs as part of the process of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin binding","termid":"GO:0005178"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0098631"],"is_obsolete":false,"name":"integrin binding involved in cell-matrix adhesion","termid":"GO:0098640"}


id: PBO:0005491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase Gdh1 (predicted)","termid":"PBO:0005491"}


id: SO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"ANNOVAR:intronic","type":"related"},{"name":"Jannovar:intron_variant","type":"exact"},{"name":"Seattleseq:intron","type":"exact"},{"name":"Seattleseq:intron-near-splice","type":"related"},{"name":"VAAST:intron_variant","type":"exact"},{"name":"VEP:intron_variant","type":"exact"},{"name":"intron variant","type":"exact"},{"name":"intron_","type":"exact"},{"name":"intronic","type":"exact"},{"name":"snpEff:INTRON","type":"exact"}],"termid":"SO:0001627"}


id: PBO:0028608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_thiamine_starvation","termid":"PBO:0028608"}


id: PBO:0053105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 4","termid":"PBO:0053105"}


id: PBO:0029365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA_level","termid":"PBO:0029365"}


id: PBO:0079870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-ureidopropionase 1","termid":"PBO:0079870"}


id: PBO:0063116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 2","termid":"PBO:0063116"}


id: GO:0000162
data:
  {"annotated_genes":["SJAG_03167","SJAG_02505","SJAG_01346","SJAG_05007","SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71137,73107,76194,78077,111301],"is_not":false,"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate.","definition_xrefs":["GOC:mah","ISBN:0471331309","MetaCyc:TRPSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"indolalkylamine biosynthetic process","termid":"GO:0046219"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01346":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"tryptophan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009096"],"synonyms":[{"name":"aromatic amino acid family biosynthetic process, anthranilate pathway","type":"exact"},{"name":"tryptophan anabolism","type":"exact"},{"name":"tryptophan biosynthesis","type":"exact"},{"name":"tryptophan formation","type":"exact"},{"name":"tryptophan synthesis","type":"exact"}],"termid":"GO:0000162","terms_by_termid":{"GO:0000162":null}}


id: PBO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 40 (pseudogene)","termid":"PBO:0045628"}


id: PR:O74886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC576.02 gene.","definition_xrefs":["UniProtKB:O74886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C576.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.02","synonyms":[{"name":"Spom972h-SPCC576.02","type":"exact"}],"termid":"PR:O74886"}


id: PBO:0091909
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Domain of Unknown function protein at the Cortex","termid":"PBO:0091909"}


id: PBO:0067950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 252","termid":"PBO:0067950"}


id: PBO:0065045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3A","termid":"PBO:0065045"}


id: PBO:0049091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 148","termid":"PBO:0049091"}


id: PR:Q10133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho2 gene.","definition_xrefs":["UniProtKB:Q10133","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein rho2 (Schizosaccharomyces pombe)","termid":"PR:000050250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.01","synonyms":[{"name":"Spom972h-rho2","type":"exact"}],"termid":"PR:Q10133"}


id: PBO:0054568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1970","termid":"PBO:0054568"}


id: PR:Q9UTD7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RRP15-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.02c","secondary_identifiers":["UniProtKB:Q9UTD7"],"synonyms":[{"name":"SPAC227.02c","type":"related"},{"name":"Spom972h-RRP15","type":"exact"}],"termid":"PR:Q9UTD7"}


id: GO:0046211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-camphor, a bicyclic monoterpene ketone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"(+)-camphor metabolic process","termid":"GO:0018882"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(+)-camphor biosynthetic process","synonyms":[{"name":"(+)-camphor anabolism","type":"exact"},{"name":"(+)-camphor biosynthesis","type":"exact"},{"name":"(+)-camphor formation","type":"exact"},{"name":"(+)-camphor synthesis","type":"exact"}],"termid":"GO:0046211"}


id: GO:0014035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate determination","termid":"GO:0048867"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate determination","termid":"GO:0014035"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: PBO:0040679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR3 antisense RNA 1","termid":"PBO:0040679"}


id: PBO:0074728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 86","termid":"PBO:0074728"}


id: GO:0009255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway that converts a carbohydrate to pyruvate and glyceraldehyde-3 phosphate by producing 6-phosphogluconate and then dehydrating it.","definition_xrefs":["PMID:12921356","GOC:jl","PMID:12981024","MetaCyc:PWY-8004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway","termid":"GO:0061678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through 6-phosphogluconate","termid":"GO:0009255"}


id: PBO:0042390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300 molecule like family member d","termid":"PBO:0042390"}


id: SO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript that is edited.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"},{"relation_name":"transcribed_to","term_name":"edited_transcript","termid":"SO:0000873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_edited_transcript","synonyms":[{"name":"gene with edited transcript","type":"exact"}],"termid":"SO:0000548"}


id: PBO:0013465
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similarity to YCL030C is at the C-term, S. pombe his7 is similar to YCl030C at the N-term","termid":"PBO:0013465"}


id: SO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RAPD is a 'PCR product' where a sequence variant is identified through the use of PCR with random primers.","definition_xrefs":["ZFIN:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PCR_product","termid":"SO:0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPD","synonyms":[{"name":"Random Amplification Polymorphic DNA","type":"exact"}],"termid":"SO:0001481"}


id: PBO:0078375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells 1","termid":"PBO:0078375"}


id: GO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ceramide + UDP-galactose = D-galactosylceramide + UDP.","definition_xrefs":["EC:2.4.1.47","MetaCyc:2.4.1.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acylsphingosine galactosyltransferase activity","secondary_identifiers":["RHEA:13093","Reactome:R-HSA-6785933"],"synonyms":[{"name":"UDP galactose-N-acylsphingosine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acylsphingosine D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acylsphingosine D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acylsphingosine galactosyltransferase activity","type":"related"}],"termid":"GO:0047263"}


id: PBO:0045461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 1","termid":"PBO:0045461"}


id: GO:1905231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a borneol stimulus.","definition_xrefs":["PMID:26593909","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to borneol","termid":"GO:1905230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to borneol","termid":"GO:1905231"}


id: PBO:0011127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 1","termid":"PBO:0011127"}


id: PBO:0053360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-3, pseudogene","termid":"PBO:0053360"}


id: PBO:0069547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 818, pseudogene","termid":"PBO:0069547"}


id: GO:1901522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in cellular response to chemical stimulus.","definition_xrefs":["PMID:22840777","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus (obsolete GO:1901522)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus","type":"exact"}],"termid":"GO:1901522"}


id: GO:0009616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of regulatory RNAs that protects against foreign organism invasion by restricting viral replication and dissemination.","definition_xrefs":["PMID:31100912","PMID:21724934","GOC:jl","PMID:17693253","PMID:23686236","PMID:24732439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNAi-mediated antiviral immune response","secondary_identifiers":["GO:0060145","GO:0060150"],"synonyms":[{"name":"RNAi-mediated antiviral immunity","type":"exact"},{"name":"VIGS","type":"related"},{"name":"viral gene silencing in virus induced gene silencing","type":"related"},{"name":"viral triggering of virus induced gene silencing","type":"related"},{"name":"virus induced gene silencing","type":"exact"},{"name":"virus-induced PTGS","type":"exact"},{"name":"virus-induced gene silencing","type":"exact"}],"termid":"GO:0009616"}


id: GO:0035662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 4 protein, a pattern recognition receptor that binds bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:18304834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor 4 binding","synonyms":[{"name":"TLR4 binding","type":"exact"}],"termid":"GO:0035662"}


id: PBO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0035823"}


id: GO:0009330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses DNA topoisomerase II (double strand cut, ATP-hydrolyzing) activity.","definition_xrefs":["WikiPedia:Type_II_topoisomerase","GOC:bhm","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}


id: GO:0048871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state at the level of the multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"homeostatic process","termid":"GO:0042592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}


id: PBO:0066385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC114 meiotic recombination protein","termid":"PBO:0066385"}


id: PBO:0066539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 5","termid":"PBO:0066539"}


id: GO:0003108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"negative regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003108"}


id: GO:0102188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-methyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity (obsolete GO:0102188)","termid":"GO:0102188"}


id: PBO:0044682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4 antisense RNA 1","termid":"PBO:0044682"}


id: GO:0050643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-deacetylbaccatin III + acetyl-CoA = baccatin III + CoA.","definition_xrefs":["EC:2.3.1.167","RHEA:20137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"10-deacetylbaccatin III 10-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.167-RXN","KEGG_REACTION:R06311"],"synonyms":[{"name":"acetyl-CoA:taxan-10beta-ol O-acetyltransferase","type":"broad"}],"termid":"GO:0050643"}


id: PBO:0077859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3","termid":"PBO:0077859"}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: PBO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase (predicted)","termid":"PBO:0000260"}


id: GO:0019631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"quinate catabolic process","secondary_identifiers":["MetaCyc:QUINATEDEG-PWY"],"synonyms":[{"name":"quinate breakdown","type":"exact"},{"name":"quinate catabolism","type":"exact"},{"name":"quinate degradation","type":"exact"},{"name":"quinic acid catabolic process","type":"exact"},{"name":"quinic acid catabolism","type":"exact"}],"termid":"GO:0019631"}


id: PBO:0038838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 8","termid":"PBO:0038838"}


id: PBO:0051848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 3","termid":"PBO:0051848"}


id: GO:0003988
data:
  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA.","definition_xrefs":["RHEA:21564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"acetyl-CoA C-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-77304","EC:2.3.1.16","Reactome:R-HSA-77321","Reactome:R-HSA-77309","Reactome:R-HSA-77329","Reactome:R-HSA-77340","UM-BBD_reactionID:r1051","Reactome:R-HSA-8874745","MetaCyc:KETOACYLCOATHIOL-RXN","Reactome:R-HSA-390250","Reactome:R-HSA-77271"],"synonyms":[{"name":"2-keto-acyl thiolase activity","type":"exact"},{"name":"3-ketoacyl coenzyme A thiolase activity","type":"exact"},{"name":"3-ketoacyl-CoA thiolase activity","type":"exact"},{"name":"3-ketothiolase activity","type":"exact"},{"name":"acetoacetyl-CoA beta-ketothiolase activity","type":"exact"},{"name":"acetyl-CoA acyltransferase activity","type":"exact"},{"name":"beta-ketoacyl coenzyme A thiolase activity","type":"exact"},{"name":"beta-ketothiolase activity","type":"exact"}],"termid":"GO:0003988","terms_by_termid":{"GO:0003985":null}}


id: GO:1990442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to nitrosative stress; a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:23985028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrosative stress","termid":"GO:0071500"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","synonyms":[{"name":"nitrosative stress-induced apoptosis","type":"related"},{"name":"nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:1990442"}


id: GO:0090374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oligopeptide is transported out of the mitochondrial matrix. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["PMID:11251115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"oligopeptide export from mitochondrion","termid":"GO:0090374"}


id: PBO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.-","termid":"PBO:0000508"}


id: PBO:0075806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 5, pseudogene","termid":"PBO:0075806"}


id: GO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortex over time, from its formation to the mature structure. The metanephric cortex is the outer region of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"is_a","term_name":"renal cortex development","termid":"GO:0072055"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortex development","termid":"GO:0072214"}


id: PBO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 14","termid":"PBO:0045158"}


id: PBO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 1","termid":"PBO:0050771"}


id: PBO:0080049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP21 pseudogene 1","termid":"PBO:0080049"}


id: GO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catenin complex alpha subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"alpha-catenin binding","termid":"GO:0045294"}


id: FYPO:0003836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"reduced RNA polymerase II carboxy-terminal domain kinase activity","type":"exact"}],"termid":"FYPO:0003836"}


id: GO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"}


id: PBO:0029814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_septated_cells_with_abnormal_cell_shape","termid":"PBO:0029814"}


id: GO:0030496
data:
  {"annotated_genes":["SJAG_03429","SJAG_02807"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101993,105653],"is_not":false,"summary":null,"term":"GO:0030496"}]},"cv_name":"cellular_component","definition":"A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02807":null,"SJAG_03429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"midbody","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Midbody_(cell_biology)"],"termid":"GO:0030496","terms_by_termid":{"GO:0030496":null}}


id: PBO:0054014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1344","termid":"PBO:0054014"}


id: PBO:0067247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 320, pseudogene","termid":"PBO:0067247"}


id: PBO:0043685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 1","termid":"PBO:0043685"}


id: GO:0047009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 3-alpha-hydroxy-5-beta-androstane-17-one = NADH + H+ + 5-beta-androstane-3,17-dione.","definition_xrefs":["MetaCyc:1.1.1.152-RXN","EC:1.1.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-alpha-hydroxy-5-beta-androstane-17-one 3-alpha-dehydrogenase activity","secondary_identifiers":["RHEA:10356"],"synonyms":[{"name":"3alpha-hydroxy-5beta-androstane-17-one 3alpha-dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxy-5beta-steroid dehydrogenase activity","type":"related"},{"name":"3alpha-hydroxy-5beta-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"etiocholanolone 3-alpha-dehydrogenase activity","type":"related"},{"name":"etiocholanolone 3alpha-dehydrogenase activity","type":"related"}],"termid":"GO:0047009"}


id: PBO:0040743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 9","termid":"PBO:0040743"}


id: GO:1900348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"}


id: GO:0044026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An increase in the epigenetic methylation of cytosine and adenosine residues in DNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA hypermethylation (obsolete GO:0044026)","termid":"GO:0044026"}


id: GO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["PMID:17076275","CL:0000333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neural crest cell delamination","synonyms":[{"name":"neural crest cell emigration","type":"exact"},{"name":"neural crest cell individualization","type":"exact"},{"name":"neural crest cell segregation","type":"related"}],"termid":"GO:0036032"}


id: PBO:0049131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 2","termid":"PBO:0049131"}


id: PBO:0073150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24B antisense RNA 1","termid":"PBO:0073150"}


id: FYPO:0004812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at sites in ribosomal DNA (rDNA) is abnormal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at rDNA","synonyms":[{"name":"abnormal RNA polymerase II release at rDNA","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at rDNA","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at rDNA during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at rDNA during vegetative growth","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at ribosomal DNA","type":"related"}],"termid":"FYPO:0004812"}


id: GO:0003154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the determination of left/right symmetry.","definition_xrefs":["GOC:mtg_heart","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in determination of left/right symmetry (obsolete GO:0003154)","synonyms":[{"name":"BMP signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"BMP signalling pathway involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0003154"}


id: PBO:0077827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member F","termid":"PBO:0077827"}


id: GO:0102708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-beta-alanine + S-adenosyl-L-methionine = H+ + N,N-dimethyl-beta-alanine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:N-methyl-beta-alanine N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6462"],"termid":"GO:0102708"}


id: PBO:0090621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine transmembrane transporter","termid":"PBO:0090621"}


id: PBO:0083953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin; involved in nucleating microtubules from both the cytoplasmic and nuclear faces of the spindle pole body; protein abundance increases in response to DNA replication stress; null mutation is complemented by human TUBG1","termid":"PBO:0083953"}


id: PR:000027586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P08965-1, Ser-438, MOD:00046|Thr-527, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/Phos:(S438,T527)","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"Spom-mei2/Phos:1","type":"exact"},{"name":"mei2/Phos:(S438,T527)","type":"exact"}],"termid":"PR:000027586"}


id: PBO:0055313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2741","termid":"PBO:0055313"}


id: PBO:0064510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J2","termid":"PBO:0064510"}


id: GO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"positive regulation of bile acid metabolic process","termid":"GO:1904253"},{"relation_name":"positively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bile acid biosynthetic process","synonyms":[{"name":"activation of bile acid biosynthetic process","type":"narrow"},{"name":"positive regulation of bile acid anabolism","type":"exact"},{"name":"positive regulation of bile acid biosynthesis","type":"exact"},{"name":"positive regulation of bile acid formation","type":"exact"},{"name":"positive regulation of bile acid synthesis","type":"exact"},{"name":"stimulation of bile acid biosynthetic process","type":"narrow"},{"name":"up regulation of bile acid biosynthetic process","type":"exact"},{"name":"up-regulation of bile acid biosynthetic process","type":"exact"},{"name":"upregulation of bile acid biosynthetic process","type":"exact"}],"termid":"GO:0070859"}


id: PBO:0075086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 136","termid":"PBO:0075086"}


id: FYPO:0005313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which maintenance of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Maintenance of mitotic sister chromatid cohesion is the process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the mitotic spindle, and congress to the metaphase plate.","definition_xrefs":["GO:0034088","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"normal maintenance of mitotic chromosome cohesion","type":"exact"},{"name":"normal maintenance of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal maintenance of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005313"}


id: GO:2000924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellodextrin metabolic process","synonyms":[{"name":"regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000924"}


id: PBO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 2","termid":"PBO:0071802"}


id: GO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that consists of a dimeric transforming growth factor beta (TGF-beta) type II receptor bound to a TGF-beta1 dimer.","definition_xrefs":["Reactome:R-HSA-170865"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1-type II receptor complex (obsolete GO:0070020)","synonyms":[{"name":"TGF-beta receptor II-TGF-beta1 complex","type":"exact"},{"name":"TGF-beta1-type II receptor complex","type":"exact"}],"termid":"GO:0070020"}


id: GO:0071819
data:
  {"annotated_genes":["SJAG_03752","SJAG_00641","SJAG_00087","SJAG_03599"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84321,94671,108271,110933],"is_not":false,"summary":null,"term":"GO:0071819"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of SAGA-type complexes SAGA and SLIK, and mediates deubiquitination of histone H2B. In S. cerevisiae, the DUBm consists of the proteins Ubp8p, Sgf11p, Sus1p, and Sgf73p.","definition_xrefs":["PMID:19226466","PMID:20395473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00641":null,"SJAG_03599":null,"SJAG_03752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DUBm complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SAGA DUBm complex","type":"narrow"},{"name":"deubiquitinating module","type":"exact"},{"name":"deubiquitination module","type":"exact"}],"termid":"GO:0071819","terms_by_termid":{"GO:0071819":null}}


id: GO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:9755289","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor activity","termid":"GO:0001614"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"P2Y","type":"related"},{"name":"P2Y receptor","type":"related"},{"name":"purinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"purinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0045028"}


id: PBO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 3","termid":"PBO:0046140"}


id: PBO:0056914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC-induced long non-coding RNA","termid":"PBO:0056914"}


id: PBO:0087238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine esterase; homolog of human neuropathy target esterase (NTE); Nte1p-mediated phosphatidylcholine turnover influences transcription factor Opi1p localization, affecting transcriptional regulation of phospholipid biosynthesis genes","termid":"PBO:0087238"}


id: SO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_loop","synonyms":[{"name":"miRNA loop","type":"exact"}],"termid":"SO:0001246"}


id: PBO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd1","termid":"PBO:0004401"}


id: PBO:0049983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible lipid droplet associated","termid":"PBO:0049983"}


id: PBO:0063146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATJ divergent transcript","termid":"PBO:0063146"}


id: PBO:0082803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart","termid":"PBO:0082803"}


id: GO:0072670
data:
  {"annotated_genes":["SJAG_04700","SJAG_00865"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74895,115333],"is_not":false,"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in mitochondrial tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:21183954","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine modification","termid":"GO:0002949"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0140053","GO:0008150"],"is_obsolete":false,"name":"mitochondrial tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial tRNA t6A modification","type":"exact"}],"termid":"GO:0072670","terms_by_termid":{"GO:0072670":null}}


id: PBO:0088685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP4 catalytic subunit Pph3","termid":"PBO:0088685"}


id: PBO:0017783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase Pdx3 (predicted)","termid":"PBO:0017783"}


id: PBO:0108524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPRP N-terminal and LCE C-terminal like protein","termid":"PBO:0108524"}


id: PATO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the medial side","termid":"PATO:0002177"}


id: PBO:0086570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPL261C is not an essential gene; partially overlaps verified ORF YPL260W","termid":"PBO:0086570"}


id: PBO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 1","termid":"PBO:0042220"}


id: PATO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern which has regular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep pattern","termid":"PATO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular sleep pattern","termid":"PATO:0001699"}


id: PBO:0084578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR075W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR074W","termid":"PBO:0084578"}


id: PBO:0075056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-19","termid":"PBO:0075056"}


id: PBO:0079650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 T","termid":"PBO:0079650"}


id: GO:0106265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + hexanoyl-CoA + 3 malonyl-CoA = 2,4,6-trihydroxyphenylhexan-1-one + 3 CO2 + 4 CoA.","definition_xrefs":["PMID:9446571","RHEA:64352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"THPH synthase activity","synonyms":[{"name":"polyketide syntase","type":"broad"}],"termid":"GO:0106265"}


id: GO:1902489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatoblast.","definition_xrefs":["GOC:TermGenie","PMID:22412967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatoblast apoptotic process","synonyms":[{"name":"hepatoblast apoptosis","type":"narrow"}],"termid":"GO:1902489"}


id: PBO:0039212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C3","termid":"PBO:0039212"}


id: FYPO:0004260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the region of a chromosome at which a DNA double-strand break has occurred for longer than normal.","definition_xrefs":["PomBase:mah","PMID:21098122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein localization to double-strand break site","synonyms":[{"name":"increased duration of protein localisation to double-strand break site","type":"exact"},{"name":"increased duration of protein localization to DSB site","type":"exact"},{"name":"increased duration of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to site of double-strand break","type":"exact"},{"name":"prolonged protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0004260"}


id: GO:0061758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor -> 2-oxoglutarate + reduced acceptor.","definition_xrefs":["GOC:dph","RHEA:21253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutarate dehydrogenase activity","termid":"GO:0047545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyglutarate dehydrogenase activity, forward reaction","synonyms":[{"name":"alpha-ketoglutarate reductase activity, reverse reaction","type":"exact"}],"termid":"GO:0061758"}


id: GO:0099167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099167)","termid":"GO:0099167"}


id: PBO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 4","termid":"PBO:0060684"}


id: PBO:0078750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 11 homolog","termid":"PBO:0078750"}


id: GO:0048938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a glial cell in a lateral line nerve is generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"}


id: GO:2000164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in outflow tract morphogenesis","termid":"GO:0061347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in outflow tract morphogenesis","termid":"GO:2000164"}


id: PBO:0057265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 490","termid":"PBO:0057265"}


id: GO:0052417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont protein (obsolete GO:0052417)","termid":"GO:0052417"}


id: GO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell development","termid":"GO:0046549"}


id: PBO:0011064
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi","termid":"PBO:0011064"}


id: PBO:0064870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 3","termid":"PBO:0064870"}


id: GO:0071043
data:
  {"annotated_genes":["SJAG_03745","SJAG_00701","SJAG_04321","SJAG_03984","SJAG_02622","SJAG_01064","SJAG_03939","SJAG_01830","SJAG_01521","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76456,74382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071034"},{"annotations":[109321,112032,95966,70201,99272,108394,114818,70722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cryptic unstable transcripts (CUTs), which are transcribed from intergenic regions. Many intergenic regions are heavily transcribed, but the transcripts are rarely detected due to rapid degradation by the nuclear exosome.","definition_xrefs":["PMID:16973436","GOC:dgf","GOC:krc","PMID:15935759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA metabolic process","termid":"GO:0034660"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0071043","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: PBO:0068583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 34, pseudogene","termid":"PBO:0068583"}


id: FYECO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, methionine nitrogen source","synonyms":[{"name":"glucose minimal medium, methionine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, methionine nitrogen source","type":"related"}],"termid":"FYECO:0000417"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: PBO:0005147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-nucleosidyl)-tetraphosphatase","termid":"PBO:0005147"}


id: GO:0052013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host macromolecule (obsolete GO:0052013)","synonyms":[{"name":"catabolism by organism of host macromolecule","type":"exact"}],"termid":"GO:0052013"}


id: PBO:0085172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligopeptide transporter; localized to peroxisomes and affects glutathione redox homeostasis; also localizes to the plasma membrane (PM) and to the late Golgi, and has a role in maintenance of lipid asymmetry between the inner and outer leaflets of the PM; member of the OPT family, with potential orthologs in S. pombe and C. albicans; also plays a role in formation of mature vacuoles and in polarized cell growth","termid":"PBO:0085172"}


id: PBO:0063404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like 3","termid":"PBO:0063404"}


id: PBO:0042551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 14","termid":"PBO:0042551"}


id: PBO:0060505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 5","termid":"PBO:0060505"}


id: PBO:0063378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin","termid":"PBO:0063378"}


id: PBO:0064225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 2","termid":"PBO:0064225"}


id: PBO:0073906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 15 member 4","termid":"PBO:0073906"}


id: GO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrozeatin + NADP+ = H+ + NADPH + zeatin.","definition_xrefs":["RHEA:12757","EC:1.3.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"zeatin reductase activity","secondary_identifiers":["MetaCyc:ZEATIN-REDUCTASE-RXN","KEGG_REACTION:R05702"],"synonyms":[{"name":"dihydrozeatin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050472"}


id: PBO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.5","termid":"PBO:0000567"}


id: FYPO:0006639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal diameter (thickness; width).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vegetative cell diameter","synonyms":[{"name":"normal cell diameter during vegetative growth","type":"exact"},{"name":"normal vegetative cell diameter during mitotic cell cycle","type":"related"},{"name":"normal vegetative cell thickness","type":"exact"},{"name":"normal vegetative cell width","type":"exact"}],"termid":"FYPO:0006639"}


id: PBO:0024476
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of A Kinase","termid":"PBO:0024476"}


id: GO:0016164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Mo-molybdopterin oxidoreductase activity (obsolete GO:0016164)","synonyms":[{"name":"Mo-molybdopterin oxidoreductase activity","type":"exact"},{"name":"molybdopterin oxidoreductase activity","type":"exact"}],"termid":"GO:0016164"}


id: GO:0021982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pineal gland over time from its initial formation until its mature state. The pineal gland is an endocrine gland that secretes melatonin and is involved in circadian rhythms.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pineal gland development","synonyms":[{"name":"epiphysis development","type":"exact"}],"termid":"GO:0021982"}


id: GO:0016596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thienylcyclohexylpiperidine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thienylcyclohexylpiperidine binding","synonyms":[{"name":"TCP binding","type":"broad"}],"termid":"GO:0016596"}


id: PBO:0090816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster protein, implicated in respiratory complex assembly","termid":"PBO:0090816"}


id: PBO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 18","termid":"PBO:0070345"}


id: FYPO:0004884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle midzone for a longer time than normal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","PomBase:mah","GO:1990023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to mitotic spindle","termid":"FYPO:0004023"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle midzone","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle midzone","type":"exact"},{"name":"increased duration of protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0004884"}


id: PBO:0083299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of ORF ASI1/YMR119W","termid":"PBO:0083299"}


id: PBO:0083229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083229"}


id: FYPO:0007037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phenylglyoxal. Cells stop growing (and may die) at a concentration of phenylglyoxal that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phenylglyoxal","synonyms":[{"name":"hypersensitive to phenylglyoxal","type":"exact"},{"name":"sensitive to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"sensitive to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"sensitive to phenylglyoxal during vegetative growth","type":"exact"}],"termid":"FYPO:0007037"}


id: GO:0035578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an azurophil granule, a primary lysosomal granule found in neutrophil granulocytes that contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.","definition_xrefs":["PMID:17152095","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"azurophil granule","termid":"GO:0042582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0031410","GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"azurophil granule lumen","synonyms":[{"name":"primary granule lumen","type":"exact"}],"termid":"GO:0035578"}


id: GO:0032365
data:
  {"annotated_genes":["SJAG_00261","SJAG_00355","SJAG_01329","SJAG_03690","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72978,114222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[97911,71837,75986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"intracellular lipid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032365","terms_by_termid":{"GO:0032366":null,"GO:0035621":null}}


id: PBO:0013806
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens TXNL1","termid":"PBO:0013806"}


id: SO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are increased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_increase","synonyms":[{"name":"copy number increase","type":"exact"}],"termid":"SO:0001911"}


id: PBO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T5orf172 family protein","termid":"PBO:0001753"}


id: PBO:0081109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A divergent transcript","termid":"PBO:0081109"}


id: GO:1901439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toluene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of toluene metabolic process","termid":"GO:1901437"},{"relation_name":"positively_regulates","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of toluene metabolic process","synonyms":[{"name":"activation of methylbenzene metabolic process","type":"exact"},{"name":"activation of methylbenzene metabolism","type":"exact"},{"name":"activation of toluene metabolic process","type":"narrow"},{"name":"activation of toluene metabolism","type":"exact"},{"name":"positive regulation of methylbenzene metabolic process","type":"exact"},{"name":"positive regulation of methylbenzene metabolism","type":"exact"},{"name":"positive regulation of toluene metabolism","type":"exact"},{"name":"up regulation of methylbenzene metabolic process","type":"exact"},{"name":"up regulation of methylbenzene metabolism","type":"exact"},{"name":"up regulation of toluene metabolic process","type":"exact"},{"name":"up regulation of toluene metabolism","type":"exact"},{"name":"up-regulation of methylbenzene metabolic process","type":"exact"},{"name":"up-regulation of methylbenzene metabolism","type":"exact"},{"name":"up-regulation of toluene metabolic process","type":"exact"},{"name":"up-regulation of toluene metabolism","type":"exact"},{"name":"upregulation of methylbenzene metabolic process","type":"exact"},{"name":"upregulation of methylbenzene metabolism","type":"exact"},{"name":"upregulation of toluene metabolic process","type":"exact"},{"name":"upregulation of toluene metabolism","type":"exact"}],"termid":"GO:1901439"}


id: PBO:0043701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 7","termid":"PBO:0043701"}


id: GO:0031167
data:
  {"annotated_genes":["SJAG_02281","SJAG_00744","SJAG_00722","SJAG_03410","SJAG_03877","SJAG_03016","SJAG_00943","SJAG_03332","SJAG_03008","SJAG_03289","SJAG_02821","SJAG_02024","SJAG_03773","SJAG_01958","SJAG_02417","SJAG_02350","SJAG_04890","SJAG_03713","SJAG_04736","SJAG_02377"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59440,64333,74422,77519,77959,95037,104817],"is_not":false,"summary":null,"term":"GO:0031167"},{"annotations":[78701,74861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[74792,77561,77679,94228,78315,77207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[106670,107862,104525,90174,94965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_00744":null,"SJAG_00943":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_02417":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_04736":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"rRNA methylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0031167","terms_by_termid":{"GO:0000452":null,"GO:0031167":null,"GO:0070475":null,"GO:0070476":null}}


id: GO:1902310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:11953308","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein dephosphorylation","termid":"GO:0035307"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine dephosphorylation","termid":"GO:1902308"},{"relation_name":"positively_regulates","term_name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-serine dephosphorylation","synonyms":[{"name":"activation of peptidyl-serine dephosphorylation","type":"narrow"},{"name":"up regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"up-regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"upregulation of peptidyl-serine dephosphorylation","type":"exact"}],"termid":"GO:1902310"}


id: PBO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb5","termid":"PBO:0000749"}


id: PBO:0043417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCHC-type zinc finger nucleic acid binding protein","termid":"PBO:0043417"}


id: PBO:0071453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 59","termid":"PBO:0071453"}


id: PBO:0057617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1183","termid":"PBO:0057617"}


id: PBO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA alternative splicing regulator 1","termid":"PBO:0061267"}


id: PBO:0011071
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukaryotes only","termid":"PBO:0011071"}


id: PBO:0056174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor","termid":"PBO:0056174"}


id: FYPO:0003916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nonsense-mediated decay","synonyms":[{"name":"abnormal NMD","type":"exact"},{"name":"abnormal nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"abnormal nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"abnormal nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"FYPO:0003916"}


id: PBO:0031273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_DNA_damage_stimulus","termid":"PBO:0031273"}


id: PBO:0054836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2250","termid":"PBO:0054836"}


id: PBO:0088743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26","termid":"PBO:0088743"}


id: PR:O13943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A late secretory pathway protein AVL9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01052","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late secretory pathway protein avl9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.14","secondary_identifiers":["UniProtKB:O13943"],"synonyms":[{"name":"Spom972h-AVL9","type":"exact"}],"termid":"PR:O13943"}


id: GO:0102118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A4 + S-adenosyl-L-methionine = gibberellin A4 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"gibberellin A4 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11359","RHEA:36107"],"termid":"GO:0102118"}


id: PBO:0034409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification_(obsolete_requires_modification)","termid":"PBO:0034409"}


id: FYPO:0004241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of DNA replication during vegetative growth","termid":"FYPO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of DNA replication during cellular response to DNA damage","synonyms":[{"name":"decreased rate of DNA replication during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA replication during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"decreased rate of DNA replication in response to DNA damage","type":"related"},{"name":"reduced rate of DNA replication during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004241"}


id: PBO:0080377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9 domain containing 1","termid":"PBO:0080377"}


id: PBO:0069945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1238, pseudogene","termid":"PBO:0069945"}


id: PR:Q10214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.06","synonyms":[{"name":"Spom972h-SPAC4H3.06","type":"exact"}],"termid":"PR:Q10214"}


id: GO:0046163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme C, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044248"],"is_obsolete":false,"name":"heme C catabolic process","synonyms":[{"name":"haem C catabolic process","type":"exact"},{"name":"haem C catabolism","type":"exact"},{"name":"heme C breakdown","type":"exact"},{"name":"heme C catabolism","type":"exact"},{"name":"heme C degradation","type":"exact"}],"termid":"GO:0046163"}


id: PBO:0038680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5 pseudogene 1","termid":"PBO:0038680"}


id: PBO:0081037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 13","termid":"PBO:0081037"}


id: PBO:0029912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_sterol_level","termid":"PBO:0029912"}


id: GO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron in response to hydrogen peroxide.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"hydrogen peroxide-induced neuron apoptosis","type":"broad"},{"name":"hydrogen peroxide-induced neuronal apoptosis","type":"broad"},{"name":"neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:0036482"}


id: FYPO:0007769
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin tethering at the nuclear periphery persists after the onset of mitosis. Normally, heterochromatic parts of chromosomes, such as centromeres and telomeres, are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased heterochromatin tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased heterochromatin anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased heterochromatin tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased heterochromatin tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased heterochromatin tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased heterochromatin tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007769","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: PBO:0065229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 11","termid":"PBO:0065229"}


id: GO:0051449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thyrotropin-releasing hormone, a tripeptide hormone that stimulates the release of thyroid-stimulating hormone (TSH) and prolactin by the anterior pituitary and it is produced by the hypothalamus and travels across the median eminence to the pituitary via the pituitary portal system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thyrotropin-releasing hormone binding","synonyms":[{"name":"thyrotropin releasing hormone binding","type":"exact"}],"termid":"GO:0051449"}


id: PATO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's forming two equal obtuse triangles with a short side in common.","definition_xrefs":["ISBN:0881923214","RKC:RKC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrow-shaped","synonyms":[{"name":"sagittate","type":"exact"}],"termid":"PATO:0001881"}


id: GO:0030443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030443)","synonyms":[{"name":"nuclear translocation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030443"}


id: GO:2001194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via aminoadipic acid","termid":"GO:1902986"},{"relation_name":"regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001194"}


id: PBO:0043735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 14","termid":"PBO:0043735"}


id: GO:0018872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arsonoacetate, a synthetic, organic compound containing a single arsenic atom. Arsonoacetate and other arsenic containing compounds are used in agricultural applications as animal feed additives, cotton defoliants and post-emergence grass herbicides.","definition_xrefs":["UM-BBD_pathwayID:ara"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"arsonoacetate metabolic process","synonyms":[{"name":"arsonoacetate metabolism","type":"exact"}],"termid":"GO:0018872"}


id: PBO:0058234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4523","termid":"PBO:0058234"}


id: PBO:0049161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 3","termid":"PBO:0049161"}


id: PBO:0039859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23 pseudogene 1","termid":"PBO:0039859"}


id: GO:0072206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus in the metanephros over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}


id: PBO:0053459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 412","termid":"PBO:0053459"}


id: PBO:0080984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 20","termid":"PBO:0080984"}


id: GO:0007122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete loss of asymmetric budding (obsolete GO:0007122)","synonyms":[{"name":"loss of asymmetric budding","type":"exact"}],"termid":"GO:0007122"}


id: FYECO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which all 20 standard amino acids were added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 20 standard aa's","synonyms":[{"name":"22 standard amino acids added","type":"exact"}],"termid":"FYECO:0000333"}


id: PBO:0057363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-1","termid":"PBO:0057363"}


id: PBO:0089673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning 7TM plasma membrane rhodopsin family protein, implicated in signalling","termid":"PBO:0089673"}


id: GO:0062104
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101256],"is_not":false,"summary":null,"term":"GO:0062104"}]},"cv_name":"molecular_function","definition":"Binding to a region of RNA containing a Pumilio-response element element. The consensus sequence for the element is UGUAAAUA.","definition_xrefs":["PMID:30601114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"pumilio-response element binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PRE binding","type":"exact"}],"termid":"GO:0062104","terms_by_termid":{"GO:0062104":null}}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00666","SJAG_04853","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96334,98544],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[91237],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: PBO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5, pseudogene","termid":"PBO:0044577"}


id: FYPO:0005181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during cellular response to UV","synonyms":[{"name":"normal protein breakdown during cellular response to UV","type":"exact"},{"name":"normal protein catabolic process during cellular response to UV","type":"exact"},{"name":"normal protein catabolism during cellular response to UV","type":"exact"},{"name":"normal protein degradation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein degradation during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005181"}


id: PR:P87118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00572","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase C3A12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.02","secondary_identifiers":["UniProtKB:P87118"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA1","type":"exact"},{"name":"pyrophosphate phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87118"}


id: PR:Q9P7B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC521.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent metalloprotease WSS1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.02","synonyms":[{"name":"DNA damage response protein WSS1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC521.02","type":"exact"}],"termid":"PR:Q9P7B5"}


id: PBO:0083998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 3; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria; binds AU-rich RNA","termid":"PBO:0083998"}


id: PBO:0045802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDNRB antisense RNA 1","termid":"PBO:0045802"}


id: GO:0031486
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XVI myosin heavy chains and associated light chains; myosin XVI heavy chains contain ankyrin repeat.","definition_xrefs":["PMID:11294886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin XVI complex","termid":"GO:0031486"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: GO:0032466
data:
  {"annotated_genes":["SJAG_02169","SJAG_00883","SJAG_01790","SJAG_04551","SJAG_00526","SJAG_03592","SJAG_03681","SJAG_00845","SJAG_03048","SJAG_02514","SJAG_00229","SJAG_01386","SJAG_04943","SJAG_03508","SJAG_03353","SJAG_06270","SJAG_04455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[100009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[112590,87658,89498,91736,106638,95777,86629,88867,101372,103951,88948,97513,103632,72355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"negatively_regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04551":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071776"],"synonyms":[{"name":"down regulation of cytokinesis","type":"exact"},{"name":"down-regulation of cytokinesis","type":"exact"},{"name":"downregulation of cytokinesis","type":"exact"},{"name":"inhibition of cytokinesis","type":"narrow"},{"name":"negative regulation of cell cycle cytokinesis","type":"related"}],"termid":"GO:0032466","terms_by_termid":{"GO:0031030":null,"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: GO:1990686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate low-density lipoprotein (LDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"LDL-containing protein-lipid-RNA complex","termid":"GO:1990686"}


id: GO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta-adrenergic receptors; the activity involves transmitting the signal to the Gs alpha subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:cb","GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor activity","termid":"GO:0004935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta-adrenergic receptor activity","synonyms":[{"name":"beta adrenoceptor","type":"exact"}],"termid":"GO:0004939"}


id: FYPO:0003370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium fluoride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on sodium fluoride","synonyms":[{"name":"normal cell population growth in presence of sodium fluoride","type":"exact"},{"name":"normal cell population growth on sodium fluoride","type":"exact"},{"name":"normal cellular response to sodium fluoride","type":"related"},{"name":"normal growth on NaF","type":"exact"},{"name":"normal vegetative cell population growth on sodium fluoride","type":"exact"}],"termid":"FYPO:0003370"}


id: PBO:0066594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member H","termid":"PBO:0066594"}


id: PBO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0004019"}


id: PBO:0080827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 associated factor 2","termid":"PBO:0080827"}


id: PATO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000846 auditory threshold (obsolete PATO:0000846)","termid":"PATO:0000846"}


id: PBO:0087780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIIa of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087780"}


id: PATO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000561 length value (obsolete PATO:0000561)","termid":"PATO:0000561"}


id: GO:1905445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","GOC:PARL","PMID:15533940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"positively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of clathrin coat assembly","synonyms":[{"name":"activation of clathrin cage assembly","type":"narrow"},{"name":"activation of clathrin coat assembly","type":"narrow"},{"name":"positive regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin coat assembly","type":"exact"},{"name":"up-regulation of clathrin cage assembly","type":"exact"},{"name":"up-regulation of clathrin coat assembly","type":"exact"},{"name":"upregulation of clathrin cage assembly","type":"exact"},{"name":"upregulation of clathrin coat assembly","type":"exact"}],"termid":"GO:1905445"}


id: PBO:0061126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family member X1","termid":"PBO:0061126"}


id: GO:0015454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Active transport of an ion across a membrane, driven by light.","definition_xrefs":["PMID:23994288","GOC:mtg_transport","PMID:26442282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"light-driven active monoatomic ion transmembrane transporter activity","secondary_identifiers":["TC:3.E"],"synonyms":[{"name":"light absorption-driven transporter","type":"exact"},{"name":"light-driven active ion transmembrane transporter activity","type":"broad"},{"name":"light-driven active transmembrane transporter activity","type":"related"},{"name":"light-driven pumps","type":"exact"}],"termid":"GO:0015454"}


id: MOD:01331
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 6x(13)C labeled L-arginine.","definition_xrefs":["PubMed:12716131","Unimod:188#R","OMSSA:136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-arginine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"},{"name":"arg-13c6","type":"exact"}],"termid":"MOD:01331"}


id: PBO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1","termid":"PBO:0042959"}


id: MOD:01635
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine removal","termid":"MOD:01635"}


id: GO:0090287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"}


id: GO:0016728
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88404,103664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a disulfide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, disulphide as acceptor","type":"exact"}],"termid":"GO:0016728","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: GO:0102902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isopimaradienal + NADPH + O2 = isopimaric acid + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isopimaradienal hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-8538"],"termid":"GO:0102902"}


id: PBO:0091958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal51","termid":"PBO:0091958"}


id: PBO:0077047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 2","termid":"PBO:0077047"}


id: PBO:0059506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase II","termid":"PBO:0059506"}


id: FYPO:0007391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which an aneuploid spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah","PMID:22737087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable aneuploid spore","synonyms":[{"name":"abolished aneuploid spore germination","type":"exact"},{"name":"aneuploid spore germination abolished","type":"exact"},{"name":"decreased aneuploid spore viability","type":"exact"},{"name":"decreased viability of aneuploid cells","type":"related"},{"name":"decreased viability of aneuploid spores","type":"related"},{"name":"lethal in aneuploid spore","type":"related"}],"termid":"FYPO:0007391"}


id: GO:0070542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fatty acid","termid":"GO:0070542"}


id: PBO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 35","termid":"PBO:0052522"}


id: PBO:0081000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 38","termid":"PBO:0081000"}


id: FYPO:0005246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing melibiose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on melibiose carbon source","synonyms":[{"name":"decreased growth on melibiose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on melibiose carbon source","type":"exact"},{"name":"reduced cell growth on melibiose carbon source","type":"related"},{"name":"slow cell growth on melibiose carbon source","type":"narrow"}],"termid":"FYPO:0005246"}


id: PBO:0058892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11399","termid":"PBO:0058892"}


id: GO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polymeric IgA immunoglobulin complex that is complexed with one chain of secretory component (SC). Polymeric IgA is present in mucosal areas, having been transported via a transcytosis mechanism in mucosal epithelial cells relying on the polymeric Ig receptor, a portion of which then remains bound to the polymeric IgA as secretory component.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric IgA immunoglobulin complex","termid":"GO:0071749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"secretory IgA immunoglobulin complex","synonyms":[{"name":"sIgA antibody","type":"exact"},{"name":"sIgA1 antibody","type":"narrow"},{"name":"secretory IgA antibody","type":"exact"}],"termid":"GO:0071751"}


id: PBO:0082499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of class II HDA1 histone deacetylase complex; role in azole resistance via Hsp90p, and in heat shock response; Hda1p interacts with Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation; the HDA1 histone deacetylase complex regulates aging through trehalose metabolism","termid":"PBO:0082499"}


id: GO:0004382
data:
  {"annotated_genes":["SJAG_01595","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70591,75434],"is_not":false,"summary":null,"term":"GO:0004382"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP + H2O = GMP + phosphate.","definition_xrefs":["RHEA:22156","PMID:2989286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01595":null,"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GUANOSINE-DIPHOSPHATASE-RXN","EC:3.6.1.42"],"synonyms":[{"name":"GDP diphosphatase activity","type":"related"},{"name":"GDP phosphohydrolase activity","type":"related"},{"name":"GDPase activity","type":"related"},{"name":"guanosine 5'-diphosphatase activity","type":"related"},{"name":"guanosine diphosphatase activity","type":"exact"},{"name":"guanosine-diphosphatase activity","type":"exact"}],"termid":"GO:0004382","terms_by_termid":{"GO:0004382":null}}


id: PBO:0083485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C","termid":"PBO:0083485"}


id: GO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response to antigenic stimulus","termid":"GO:0002862"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"negatively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of acute inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002865"}


id: GO:0098045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus baseplate.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus baseplate assembly","termid":"GO:0098045"}


id: PR:O14066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tax4 gene.","definition_xrefs":["UniProtKB:O14066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rDNA silencing protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.09","synonyms":[{"name":"Spom972h-tax4","type":"exact"}],"termid":"PR:O14066"}


id: PBO:0052548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C1","termid":"PBO:0052548"}


id: PBO:0054248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1630","termid":"PBO:0054248"}


id: GO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to endoplasmic reticulum stress","termid":"GO:1902010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"negative regulation of translation initiation in response to ER stress","type":"related"}],"termid":"GO:0036495"}


id: FYPO:0004964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cortical patches than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"actin cortical patches present in decreased numbers","synonyms":[{"name":"F-actin patches present in decreased numbers","type":"exact"},{"name":"actin cortical patches present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"actin cortical patches present in decreased numbers during vegetative growth","type":"exact"},{"name":"actin cortical patches present in reduced numbers","type":"exact"},{"name":"actin patches present in decreased numbers","type":"exact"},{"name":"decreased actin cortical patch formation during vegetative growth","type":"related"},{"name":"decreased number of actin cortical patches during vegetative growth","type":"exact"},{"name":"fewer actin cortical patches present during vegetative growth","type":"exact"}],"termid":"FYPO:0004964"}


id: GO:0019783
data:
  {"annotated_genes":["SJAG_00764","SJAG_01768","SJAG_03686","SJAG_01312","SJAG_00720","SJAG_02341","SJAG_00087","SJAG_04497","SJAG_04538","SJAG_03147","SJAG_00795","SJAG_16454","SJAG_03429","SJAG_00742","SJAG_00776","SJAG_03752","SJAG_00573","SJAG_00546","SJAG_04994","SJAG_02244","SJAG_00662","SJAG_05977","SJAG_01281","SJAG_02419","SJAG_04215","SJAG_00125","SJAG_00966","SJAG_04651","SJAG_01481","SJAG_02900","SJAG_00644","SJAG_02214","SJAG_02774","SJAG_01528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84327,110940,108286,75526,111823,75520,90185,112640,101995,84195,108224,111896,73793,94170,75871,77049,111457,110239,76522,102172,107641,89443,100948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004843"},{"annotations":[75457,77697,91383,71057,106805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019784"},{"annotations":[86166,70151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016929"},{"annotations":[71213,107188,95609,96300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101005"},{"annotations":[84196,108225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990380"},{"annotations":[92659,77846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061578"},{"annotations":[96067,100949,111825,102173,91384,108289,73576,90186,101996,111897,87564,112642,84328,110240,106806,111458,92660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"},{"annotations":[102503,74160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"An isopeptidase activity that cleaves ubiquitin or ubiquitin-like proteins (ULP; e.g. ATG8, ISG15, NEDD8, SUMO) from target proteins.","definition_xrefs":["PMID:19489724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00125":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00662":null,"SJAG_00720":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02214":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02774":null,"SJAG_02900":null,"SJAG_03147":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null,"SJAG_04994":null,"SJAG_05977":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ubiquitin-like protein peptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070138","GO:0140491","GO:1904455","GO:1904454"],"synonyms":[{"name":"small conjugating protein-specific isopeptidase activity","type":"exact"},{"name":"small conjugating protein-specific protease activity","type":"exact"},{"name":"ubiquitin-like hydrolase activity","type":"exact"},{"name":"ubiquitin-like protein-specific isopeptidase activity","type":"exact"},{"name":"ubiquitin-like protein-specific protease activity","type":"exact"},{"name":"ubiquitin-like specific protease activity","type":"narrow"},{"name":"ubiquitin-like-protein-specific protease activity","type":"narrow"},{"name":"ubiquitin-specific protease activity involved in negative regulation of ERAD pathway","type":"narrow"},{"name":"ubiquitin-specific protease activity involved in positive regulation of ERAD pathway","type":"narrow"},{"name":"ubiquitinyl-like hydrolase activity","type":"exact"}],"termid":"GO:0019783","terms_by_termid":{"GO:0004843":null,"GO:0016929":null,"GO:0019784":null,"GO:0061578":null,"GO:0070139":null,"GO:0101005":null,"GO:0140492":null,"GO:1990380":null}}


id: FYPO:0000847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased protein degradation during vegetative growth","synonyms":[{"name":"increased protein breakdown during vegetative growth","type":"exact"},{"name":"increased protein catabolic process during vegetative growth","type":"exact"},{"name":"increased protein catabolism during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000847"}


id: PBO:0005139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-C family","termid":"PBO:0005139"}


id: PBO:0088083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX","termid":"PBO:0088083"}


id: GO:0007085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear membrane vesicle binding to chromatin (obsolete GO:0007085)","synonyms":[{"name":"nuclear membrane vesicle binding to chromatin","type":"exact"}],"termid":"GO:0007085"}


id: GO:0097142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of PUMA and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PUMA-BCL-2 complex","termid":"GO:0097142"}


id: SO:1001270
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001270 stop_codon_redefinition_as_pyrrolysine (obsolete SO:1001270)","termid":"SO:1001270"}


id: PBO:0070382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chondrogenesis RNA","termid":"PBO:0070382"}


id: GO:2001050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of tendon cell differentiation","termid":"GO:2001049"},{"relation_name":"negatively_regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tendon cell differentiation","synonyms":[{"name":"negative regulation of muscle attachment cell differentiation","type":"exact"},{"name":"negative regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001050"}


id: PBO:0086305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with DNA-dependent ATPase and ssDNA annealing activities; involved in maintenance of genome; interacts functionally with DNA polymerase delta; homolog of human Werner helicase interacting protein (WHIP); forms nuclear foci upon DNA replication stress","termid":"PBO:0086305"}


id: GO:0102432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + S-adenosyl-L-methionine = rhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"quercetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13906"],"termid":"GO:0102432"}


id: GO:1905823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid separation","termid":"GO:2000816"},{"relation_name":"negatively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"negative regulation of mitotic sister chromatid arm separation","synonyms":[{"name":"down regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"down-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"downregulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"inhibition of mitotic sister chromatid arm separation","type":"narrow"}],"termid":"GO:1905823"}


id: GO:0106194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transocation of inorganic cations and their chelates linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates linked to a decarboxylation reaction (obsolete GO:0106194)","secondary_identifiers":["EC:7.2.4.-"],"termid":"GO:0106194"}


id: PBO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 4","termid":"PBO:0043707"}


id: PBO:0062648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 2","termid":"PBO:0062648"}


id: PBO:0055775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 1, region 1","termid":"PBO:0055775"}


id: PBO:0081146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP64 zinc finger protein pseudogene 1","termid":"PBO:0081146"}


id: PBO:0077554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 260","termid":"PBO:0077554"}


id: PBO:0081390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 230","termid":"PBO:0081390"}


id: GO:0070608
data:
  {"annotated_genes":["SJAG_00610","SJAG_04666","SJAG_02278","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99122,88389,85311,91009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070606"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070607"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070598"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"regulation of cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070608","terms_by_termid":{"GO:0070610":null}}


id: PBO:0043711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A2","termid":"PBO:0043711"}


id: GO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the rough endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"rough endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao1819509473"],"synonyms":[{"name":"RER lumen","type":"exact"},{"name":"rough ER lumen","type":"exact"}],"termid":"GO:0048237"}


id: FYPO:0001982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"},{"relation_name":"is_a","term_name":"decreased rate of DNA replication","termid":"FYPO:0001981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of DNA replication during vegetative growth","synonyms":[{"name":"decreased rate of DNA replication during mitotic cell cycle","type":"related"},{"name":"reduced rate of DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001982"}


id: PBO:0072608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 3","termid":"PBO:0072608"}


id: GO:0070173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of enamel mineralization","termid":"GO:0070173"}


id: PBO:0045318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain alpha","termid":"PBO:0045318"}


id: GO:0098646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of collagen triple helices associated to form a sheet-like network.","definition_xrefs":["GOC:dos","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen sheet","synonyms":[{"name":"collagen hexagonal network","type":"exact"}],"termid":"GO:0098646"}


id: PBO:0052704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 5","termid":"PBO:0052704"}


id: PR:Q10448
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.15c","synonyms":[{"name":"Spom972h-SPAC12B10.15c","type":"exact"}],"termid":"PR:Q10448"}


id: FYPO:0003640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000652"],"is_obsolete":false,"name":"abnormal adenylate kinase activity","termid":"FYPO:0003640"}


id: GO:0033401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UUU codon-amino acid adaptor activity","synonyms":[{"name":"TTT codon-amino acid adaptor activity","type":"exact"},{"name":"phenylalanine tRNA","type":"related"}],"termid":"GO:0033401"}


