# terms

id: FYPO:0002667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"decreased peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"reduced peptide-serine-N-acetyltransferase activity","type":"exact"}],"termid":"FYPO:0002667"}


id: PBO:0069390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 650, pseudogene","termid":"PBO:0069390"}


id: GO:0075110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host receptor-mediated signal transduction (obsolete GO:0075110)","synonyms":[{"name":"positive regulation by symbiont of host receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075110"}


id: GO:0103040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an aldose + an oxidized electron acceptor = H+ + an aldonate + a reduced electron acceptor.","definition_xrefs":["GOC:pz","EC:1.1.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aldose sugar dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN0-6371"],"termid":"GO:0103040"}


id: PBO:0048715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 1","termid":"PBO:0048715"}


id: GO:0008962
data:
  {"annotated_genes":["SJAG_03700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114564],"is_not":false,"summary":null,"term":"GO:0008962"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerophosphate + H2O = phosphatidylglycerol + phosphate.","definition_xrefs":["PMID:4292860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylglycerophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483197","RHEA:16725","EC:3.1.3.27","MetaCyc:PGPPHOSPHA-RXN"],"synonyms":[{"name":"PGP phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphate phosphatase activity","type":"related"},{"name":"phosphatidylglycerophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0008962","terms_by_termid":{"GO:0008962":null}}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: PBO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase Sir1","termid":"PBO:0000836"}


id: GO:0035026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features of leading edge cells, cells at the front of a migrating epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell differentiation","termid":"GO:0035026"}


id: PBO:0053715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 924","termid":"PBO:0053715"}


id: PBO:0074579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stannin","termid":"PBO:0074579"}


id: PBO:0041261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q A chain","termid":"PBO:0041261"}


id: FYPO:0000672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell morphology","synonyms":[{"name":"cellular morphology: normal","type":"related"}],"termid":"FYPO:0000672"}


id: GO:2001140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"positively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid transport","termid":"GO:2001140"}


id: GO:0008282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that comprises four pore-forming (Kir6.x) and four regulatory sulphonylurea receptor (SURx) subunits and forms a transmembrane channel through which ions may pass. The opening and closing of the channel is regulated by ATP: binding of ATP to the Kir6.x subunit inhibits channel activity, whereas binding of Mg2+-complexed ATP or ADP to the SURx subunit stimulates channel activity.","definition_xrefs":["PMID:16956886","GOC:bhm","PMID:16308567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"inward rectifying potassium channel","synonyms":[{"name":"ATP-sensitive potassium channel complex","type":"exact"},{"name":"KCNJ11-SUR complex","type":"related"},{"name":"KCNJ11-SURx complex","type":"related"},{"name":"KCNJ8-SUR complex","type":"related"},{"name":"KCNJ8-SURx complex","type":"related"},{"name":"Kir6-SUR complex","type":"related"},{"name":"Kir6.1-SUR complex","type":"related"},{"name":"Kir6.1-SURx complex","type":"related"},{"name":"Kir6.2-SUR complex","type":"related"},{"name":"Kir6.2-SURx complex","type":"related"},{"name":"Kir6.x complex","type":"related"},{"name":"Kir6.x-SURx complex","type":"related"},{"name":"inward rectifying K+ channel","type":"exact"}],"termid":"GO:0008282"}


id: GO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete sugar/polyol channel activity (obsolete GO:0015253)","synonyms":[{"name":"sugar/polyol channel activity","type":"exact"}],"termid":"GO:0015253"}


id: PBO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11","termid":"PBO:0070764"}


id: GO:0070335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to aspartate, the alpha-amino-acid anion of 2-aminobutanedioic acid that has formula C4H5NO4.","definition_xrefs":["GOC:mah","CHEBI:29995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"aspartate binding","synonyms":[{"name":"aspartic acid binding","type":"exact"}],"termid":"GO:0070335"}


id: GO:0090298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA replication","termid":"GO:0090296"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial DNA metabolic process","termid":"GO:1901859"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA replication","synonyms":[{"name":"negative regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090298"}


id: PBO:0046150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastase, neutrophil expressed","termid":"PBO:0046150"}


id: PBO:0045442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L4 pseudogene 2","termid":"PBO:0045442"}


id: PBO:0061740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 3","termid":"PBO:0061740"}


id: PBO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein, Erd1 homolog, required for glycosylation and ER retention Erd1/Gmn2","termid":"PBO:0090647"}


id: GO:0062232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prostanoids.","definition_xrefs":["PMID:25449649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostanoid catabolic process","termid":"GO:0062232"}


id: PBO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 5","termid":"PBO:0052587"}


id: PBO:0084266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; forms a complex with Ssp120p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; EMP47 has a paralog, EMP46, that arose from the whole genome duplication","termid":"PBO:0084266"}


id: PBO:0046040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma","termid":"PBO:0046040"}


id: GO:0102977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrilotriacetate + O2 + FMNH2 = ammoniodiacetate + 2-oxo monocarboxylic acid anion + H2O + FMN.","definition_xrefs":["EC:1.14.14.10","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrilotriacetate monooxygenase activity (FMN-dependent)","secondary_identifiers":["RHEA:31359","MetaCyc:RXN-9508"],"termid":"GO:0102977"}


id: PBO:0041268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 1","termid":"PBO:0041268"}


id: PBO:0069718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 998, pseudogene","termid":"PBO:0069718"}


id: GO:0031820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y11 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"P2Y11 nucleotide receptor binding","synonyms":[{"name":"P2Y11 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031820"}


id: PBO:0074618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 18","termid":"PBO:0074618"}


id: PBO:0085031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase regulatory subunit of the 26S proteasome; similar to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085031"}


id: PBO:0058614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6746","termid":"PBO:0058614"}


id: PATO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"biological sex","termid":"PATO:0000047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenotypic sex","termid":"PATO:0001894"}


id: GO:0097053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"L-kynurenine metabolic process","termid":"GO:0097052"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"L-kynurenine catabolic process","synonyms":[{"name":"L-kynurenine breakdown","type":"exact"},{"name":"L-kynurenine catabolism","type":"exact"},{"name":"L-kynurenine degradation","type":"exact"}],"termid":"GO:0097053"}


id: GO:0061578
data:
  {"annotated_genes":["SJAG_01528","SJAG_01281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77846,92659],"is_not":false,"summary":null,"term":"GO:0061578"}]},"cv_name":"molecular_function","definition":"Hydrolysis of a ubiquitin unit from a ubiquitinated protein linked via the Lys63 residue of ubiquitin.","definition_xrefs":["GOC:pg","PMID:18313383","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01281":null,"SJAG_01528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"K63-linked deubiquitinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9711016","Reactome:R-HSA-688136","Reactome:R-HSA-5690856","Reactome:R-HSA-8869506","Reactome:R-HSA-936390","Reactome:R-HSA-5696547","Reactome:R-HSA-5691431","Reactome:R-HSA-5357845","Reactome:R-HSA-936381","Reactome:R-HSA-9685219","Reactome:R-HSA-9817400","Reactome:R-HSA-5691439","Reactome:R-HSA-741411","Reactome:R-HSA-5691411","Reactome:R-HSA-9750942"],"synonyms":[{"name":"K63-specific deubiquitinase activity","type":"exact"},{"name":"Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"GO:0061578","terms_by_termid":{"GO:0061578":null}}


id: PBO:0061042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 3","termid":"PBO:0061042"}


id: PBO:0035728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_subtelomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0035728"}


id: GO:0015295
data:
  {"annotated_genes":["SJAG_04673","SJAG_02780","SJAG_04905","SJAG_00057","SJAG_03595","SJAG_03960","SJAG_04506","SJAG_01406","SJAG_02779","SJAG_04068","SJAG_03608","SJAG_02958","SJAG_03820","SJAG_03606"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88001,88007],"is_not":false,"summary":null,"term":"GO:0015295"},{"annotations":[72712,74247,72822,72856,70972,75426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[72601,72095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[97909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[74949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(out) = solute(in) + H+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"solute:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"},{"name":"heavy metal ion:hydrogen symporter activity","type":"narrow"},{"name":"high affinity metal ion uptake transporter activity","type":"narrow"},{"name":"low affinity metal ion uptake transporter activity","type":"narrow"},{"name":"proline/glycine/betaine:hydrogen/sodium symporter activity","type":"narrow"},{"name":"solute:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015295","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0034216":null,"GO:0097434":null}}


id: GO:1903524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood circulation.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:10659969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"positively_regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood circulation","synonyms":[{"name":"activation of blood circulation","type":"narrow"},{"name":"activation of hemolymph circulation","type":"related"},{"name":"positive regulation of hemolymph circulation","type":"related"},{"name":"up regulation of blood circulation","type":"exact"},{"name":"up regulation of hemolymph circulation","type":"related"},{"name":"up-regulation of blood circulation","type":"exact"},{"name":"up-regulation of hemolymph circulation","type":"related"},{"name":"upregulation of blood circulation","type":"exact"},{"name":"upregulation of hemolymph circulation","type":"related"}],"termid":"GO:1903524"}


id: MOD:00750
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and the 3'- or 5'-end of DNA through a phosphodiester bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonucleic acid linked residue","synonyms":[{"name":"DNARes","type":"exact"}],"termid":"MOD:00750"}


id: PBO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisF","termid":"PBO:0013080"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.208","RHEA:23812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02548"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: PBO:0068861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 101, pseudogene","termid":"PBO:0068861"}


id: GO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate = (15Z)-12-oxophyto-10,15-dienoate.","definition_xrefs":["EC:5.3.99.6","RHEA:22592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"allene-oxide cyclase activity","secondary_identifiers":["KEGG_REACTION:R03402","MetaCyc:ALLENE-OXIDE-CYCLASE-RXN"],"synonyms":[{"name":"(9Z)-(13S)-12,13-epoxyoctadeca-9,11,15-trienoate isomerase (cyclizing)","type":"related"}],"termid":"GO:0046423"}


id: PBO:0086720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0086720"}


id: PBO:0064185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G10 pseudogene 1","termid":"PBO:0064185"}


id: PBO:0059153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 7","termid":"PBO:0059153"}


id: GO:1901771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of daunorubicin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:7601857","UniPathway:UPA00054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"daunorubicin metabolic process","termid":"GO:0044597"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"daunorubicin biosynthetic process","synonyms":[{"name":"daunorubicin anabolism","type":"exact"},{"name":"daunorubicin biosynthesis","type":"exact"},{"name":"daunorubicin formation","type":"exact"},{"name":"daunorubicin synthesis","type":"exact"}],"termid":"GO:1901771"}


id: GO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter and stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:dph","PMID:15302821"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter (obsolete GO:0061427)","termid":"GO:0061427"}


id: GO:0035138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin morphogenesis","termid":"GO:0033334"},{"relation_name":"part_of","term_name":"pectoral fin development","termid":"GO:0033339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pectoral fin morphogenesis","termid":"GO:0035138"}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: FYPO:0004213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000138","FYPO:0005447","FYPO:0000631","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"abnormal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004213"}


id: PBO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin Sgo2","termid":"PBO:0002191"}


id: PBO:0052775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 67","termid":"PBO:0052775"}


id: GO:0009978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13(S)-hydroperoxylinolenate = 12,13(S)-epoxylinolenate + H2O.","definition_xrefs":["PMID:9778849","EC:4.2.1.92","MetaCyc:RXN1F-19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"allene oxide synthase activity","secondary_identifiers":["RHEA:25074","GO:0047987"],"synonyms":[{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase [(9Z)-(13S)-12,13-epoxyoctadeca-9,11-dienoate-forming]","type":"related"},{"name":"(9Z,11E,14Z)-(13S)-hydroperoxyoctadeca-9,11,14-trienoate 12,13-hydro-lyase activity","type":"related"},{"name":"HPI","type":"related"},{"name":"hydroperoxide dehydratase activity","type":"related"},{"name":"hydroperoxide isomerase activity","type":"related"},{"name":"linoleate hydroperoxide isomerase","type":"related"},{"name":"linoleic acid hydroperoxide isomerase","type":"related"}],"termid":"GO:0009978"}


id: GO:0036314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sterol stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sterol","termid":"GO:0036314"}


id: GO:0098750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FXYD domain.","definition_xrefs":["GOC:mr","PMID:10950925","PMID:16403837","PMID:18000745","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FYXD domain binding","termid":"GO:0098750"}


id: GO:0044509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:fj","PMID:8405712","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of signal transduction in another organism","synonyms":[{"name":"envenomation resulting in modulation of signal transduction in other organismm","type":"exact"}],"termid":"GO:0044509"}


id: GO:0150023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the apical neuron side and organized into dendritic branches.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"apical dendrite morphogenesis","termid":"GO:0150021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite arborization","termid":"GO:0150023"}


id: FYPO:0005797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which microtubule bundles are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"short microtubule bundle","synonyms":[{"name":"decreased microtubule bundle length","type":"exact"},{"name":"short MT bundles","type":"exact"},{"name":"short microtubule array","type":"related"}],"termid":"FYPO:0005797"}


id: GO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the host cell rough endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum membrane","termid":"GO:0044167"},{"relation_name":"part_of","term_name":"host cell rough endoplasmic reticulum","termid":"GO:0044168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell rough endoplasmic reticulum membrane","synonyms":[{"name":"host rough endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0044169"}


id: PBO:0015230
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(3)","termid":"PBO:0015230"}


id: PBO:0078069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 59 (non-functional)","termid":"PBO:0078069"}


id: PBO:0038921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G3","termid":"PBO:0038921"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: PBO:0045018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 1C","termid":"PBO:0045018"}


id: PBO:0087482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromosomal passenger complex (CPC); CPC is comprised of Ipl1p-Sli15p-Bir1p-Nbl1p and regulates chromosome segregation; required for chromosome bi-orientation and for spindle assembly checkpoint activation upon reduced sister kinetochore tension; relative distribution to shortened microtubules increases upon DNA replication stress; sumoylated in an Mms21p-dependent manner; human survivin homolog","termid":"PBO:0087482"}


id: GO:0120151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring disassembly.","definition_xrefs":["PMID:19109423"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic actomyosin contractile ring disassembly (obsolete GO:0120151)","termid":"GO:0120151"}


id: PBO:0038623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Cartwright blood group)","termid":"PBO:0038623"}


id: GO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to the interleukin-1 receptor complex.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"interleukin-1 binding","termid":"GO:0019966"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0005488","GO:0140678","GO:0098772","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-1 receptor antagonist activity","synonyms":[{"name":"IL-1ra","type":"exact"}],"termid":"GO:0005152"}


id: GO:0106022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"positively_regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle docking","synonyms":[{"name":"positive regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106022"}


id: PBO:0054392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1788","termid":"PBO:0054392"}


id: PBO:0091718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane palmitoyltransferase Pfa5","termid":"PBO:0091718"}


id: PBO:0049045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 36","termid":"PBO:0049045"}


id: FYPO:0002701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to torin1. Cells stop growing (and may die) at a concentration of torin1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to torin1","synonyms":[{"name":"hypersensitive to torin1","type":"exact"},{"name":"sensitive to torin 1","type":"exact"},{"name":"sensitive to torin1 during mitotic cell cycle","type":"related"},{"name":"sensitive to torin1 during vegetative growth","type":"exact"}],"termid":"FYPO:0002701"}


id: GO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the lectin pathway in the bitten/stung organism.","definition_xrefs":["PMID:20837040","GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, lectin pathway in another organism (obsolete GO:0044639)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, lectin pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044639"}


id: PBO:0029248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere_during_mitotic_metaphase","termid":"PBO:0029248"}


id: GO:0030330
data:
  {"annotated_genes":["SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110236],"is_not":false,"summary":null,"term":"GO:0030330"}]},"cv_name":"biological_process","definition":"A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"},{"relation_name":"is_a","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction by p53 class mediator","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006976"],"synonyms":[{"name":"DNA damage response, activation of p53","type":"related"},{"name":"TP53 signaling pathway","type":"related"},{"name":"p53 signaling pathway","type":"related"},{"name":"p53-mediated DNA damage response","type":"broad"}],"termid":"GO:0030330","terms_by_termid":{"GO:0030330":null}}


id: PBO:0088817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER stress response thioredoxin family membrane disulfide oxidoreductase","termid":"PBO:0088817"}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0016226","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: PBO:0052253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD21 antisense RNA 1","termid":"PBO:0052253"}


id: PBO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like","termid":"PBO:0090502"}


id: PBO:0071101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 103","termid":"PBO:0071101"}


id: MOD:01556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01556"}


id: FYPO:0003412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere","termid":"FYPO:0002834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased chromatin silencing at centromere otr","type":"exact"},{"name":"decreased chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"decreased chromatin silencing at pericentric region","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region","type":"related"},{"name":"decreased heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"reduced chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0003412"}


id: PBO:0066263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 3","termid":"PBO:0066263"}


id: GO:0033488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate 24,25-dihydrolanosterol.","definition_xrefs":["GOC:mah","MetaCyc:PWY66-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cholesterol biosynthetic process via 24,25-dihydrolanosterol","synonyms":[{"name":"cholesterol anabolism via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol biosynthesis via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol formation via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol synthesis via 24,25-dihydrolanosterol","type":"exact"}],"termid":"GO:0033488"}


id: PBO:0002737
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.3","termid":"PBO:0002737"}


id: GO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA repair protein (obsolete GO:0003685)","synonyms":[{"name":"DNA repair protein","type":"exact"}],"termid":"GO:0003685"}


id: PBO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex subunit Get1 (predicted)","termid":"PBO:0004905"}


id: FYPO:0003979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, a single, normally located septum, and 1C DNA content in each nucleus, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:vw","PMID:8313905","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","termid":"FYPO:0004719"},{"relation_name":"output_of","term_name":"abnormal exit from mitosis","termid":"FYPO:0003972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C DNA content per nucleus during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell with 1C nuclei","type":"exact"}],"termid":"FYPO:0003979"}


id: PBO:0075730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9 pseudogene 1","termid":"PBO:0075730"}


id: GO:0120257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-threonine.","definition_xrefs":["GOC:krc","PMID:16728640","PMID:22802624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine acetylation","termid":"GO:0120257"}


id: PR:O94461
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1687.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.21","synonyms":[{"name":"Spom972h-SPAC1687.21","type":"exact"}],"termid":"PR:O94461"}


id: GO:0021550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata development","synonyms":[{"name":"medulla development","type":"related"},{"name":"myelencephalon development","type":"related"}],"termid":"GO:0021550"}


id: PBO:0076556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymus, brain and testes associated","termid":"PBO:0076556"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: PBO:0071261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 6","termid":"PBO:0071261"}


id: GO:0006334
data:
  {"annotated_genes":["SJAG_00942","SJAG_00170","SJAG_02314","SJAG_04272","SJAG_00336","SJAG_03542","SJAG_04257","SJAG_00303","SJAG_02906","SJAG_02198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87020,87021,87022,91150,92557,104151,104535,106125,111186,113615],"is_not":false,"summary":null,"term":"GO:0006334"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome organization","termid":"GO:0034728"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00303":null,"SJAG_00336":null,"SJAG_00942":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02906":null,"SJAG_03542":null,"SJAG_04257":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"nucleosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone chaperone","type":"related"},{"name":"nucleosome modeling","type":"exact"}],"termid":"GO:0006334","terms_by_termid":{"GO:0006334":null}}


id: PBO:0089125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family minus-end directed microtubule motor Pkl1","termid":"PBO:0089125"}


id: GO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["RESID:AA0247","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"keratan sulfate metabolic process","termid":"GO:0042339"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"keratan sulfate biosynthetic process","synonyms":[{"name":"keratan sulfate anabolism","type":"exact"},{"name":"keratan sulfate biosynthesis","type":"exact"},{"name":"keratan sulfate formation","type":"exact"},{"name":"keratan sulfate synthesis","type":"exact"},{"name":"keratan sulphate biosynthesis","type":"exact"},{"name":"keratan sulphate biosynthetic process","type":"exact"}],"termid":"GO:0018146"}


id: GO:1904374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a kainic acid stimulus.","definition_xrefs":["GOC:TermGenie","PMID:17443789","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to kainic acid","termid":"GO:1904373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to kainic acid","termid":"GO:1904374"}


id: GO:0046832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of RNA from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of RNA export from nucleus","termid":"GO:0046831"},{"relation_name":"negatively_regulates","term_name":"RNA export from nucleus","termid":"GO:0006405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA export from nucleus","synonyms":[{"name":"down regulation of RNA export from nucleus","type":"exact"},{"name":"down-regulation of RNA export from nucleus","type":"exact"},{"name":"downregulation of RNA export from nucleus","type":"exact"},{"name":"inhibition of RNA export from nucleus","type":"narrow"},{"name":"negative regulation of RNA export from cell nucleus","type":"exact"},{"name":"negative regulation of RNA export out of nucleus","type":"exact"},{"name":"negative regulation of RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of RNA-nucleus export","type":"exact"}],"termid":"GO:0046832"}


id: PBO:0046487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expanded repeat domain, CAG/CTG 1","termid":"PBO:0046487"}


id: GO:0106366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + guanosine = ADP + GMP.","definition_xrefs":["PMID:7665468","PMID:10879466","RHEA:27710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"guanosine kinase activity","secondary_identifiers":["EC:2.7.1.73"],"termid":"GO:0106366"}


id: GO:0019172
data:
  {"annotated_genes":["SJAG_04404","SJAG_04674","SJAG_02106","SJAG_02988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72418,73952,89151,89152],"is_not":false,"summary":null,"term":"GO:0019172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: methylglyoxal + H2O = D-lactate.","definition_xrefs":["PMID:7848303","PMID:21696459","GOC:mcc","RHEA:27754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"glyoxalase III activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:4.2.1.130","MetaCyc:GLYOXIII-RXN"],"synonyms":[{"name":"(R)-lactate hydro-lyase","type":"exact"},{"name":"D-lactate dehydratase","type":"exact"},{"name":"glutathione-independent glyoxalase activity","type":"related"}],"termid":"GO:0019172","terms_by_termid":{"GO:0019172":null}}


id: PR:Q9UT36
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase C824.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.07","synonyms":[{"name":"Glx II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo2","type":"exact"},{"name":"glyoxalase II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT36"}


id: GO:1905048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["PMID:26473732","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metallopeptidase activity","synonyms":[{"name":"regulation of metalloprotease activity","type":"narrow"},{"name":"regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905048"}


id: PBO:0005750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucear export factor Sac3 (predicted)","termid":"PBO:0005750"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["RHEA:16661","MetaCyc:2.5.1.63-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: PBO:0075219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPN upstream open reading frame","termid":"PBO:0075219"}


id: GO:0099644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to presynapse","termid":"GO:1905383"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynaptic membrane","synonyms":[{"name":"protein localisation in presynaptic membrane","type":"exact"},{"name":"protein localisation to presynaptic membrane","type":"exact"},{"name":"protein localization in presynaptic membrane","type":"exact"}],"termid":"GO:0099644"}


id: CHEBI:28786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraquat dichloride","termid":"CHEBI:28786"}


id: GO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the Purkinje myocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during Purkinje myocyte action potential","termid":"GO:0086051"}


id: PBO:0038491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 2","termid":"PBO:0038491"}


id: GO:0035507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphoprotein phosphatase activity","termid":"GO:0043666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myosin-light-chain-phosphatase activity","termid":"GO:0035507"}


id: GO:1902853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration during mitotic telophase.","definition_xrefs":["PMID:23087209","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclear migration along microtubule","termid":"GO:1902839"},{"relation_name":"is_a","term_name":"regulation of nuclear migration during mitotic telophase","termid":"GO:1902852"},{"relation_name":"negatively_regulates","term_name":"nuclear migration during mitotic telophase","termid":"GO:0090561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nuclear migration during mitotic telophase","synonyms":[{"name":"down regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"down-regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"downregulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"inhibition of nuclear migration during mitotic telophase","type":"narrow"}],"termid":"GO:1902853"}


id: PBO:0089445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, no S. pombe detected","termid":"PBO:0089445"}


id: SO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An open reading frame that encodes a peptide of less than 100 amino acids.","definition_xrefs":["POMBASE:mah","PMID:23970561","PMID:24705786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sORF","synonyms":[{"name":"smORF","type":"exact"},{"name":"small ORF","type":"exact"}],"termid":"SO:0002028"}


id: GO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"down regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"down-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"downregulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"inhibition of tolerance induction dependent upon immune response","type":"narrow"},{"name":"negative regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002653"}


id: GO:0051485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoids via isopentenyl diphosphate, synthesized by the mevalonate pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in terpenoid biosynthesis, and in mevalonate-dependent terpenoid biosynthesis, acetate, in the form of acetyl-CoA, is converted to isopentenyl diphosphate (IPP) through a series of mevalonate intermediates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"terpenoid biosynthetic process, mevalonate-dependent","synonyms":[{"name":"terpene biosynthesis, mevalonate-dependent","type":"narrow"},{"name":"terpene biosynthetic process, mevalonate-dependent","type":"narrow"},{"name":"terpenoid anabolism, mevalonate-dependent","type":"exact"},{"name":"terpenoid formation, mevalonate-dependent","type":"exact"},{"name":"terpenoid synthesis, mevalonate-dependent","type":"exact"}],"termid":"GO:0051485"}


id: GO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0030234","GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"guanylate cyclase inhibitor activity","termid":"GO:0030251"}


id: GO:0004820
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72541],"is_not":false,"summary":null,"term":"GO:0004820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).","definition_xrefs":["EC:6.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016874","GO:0140098","GO:0140101","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380048","MetaCyc:GLYCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380240","RHEA:16013"],"synonyms":[{"name":"glycine:tRNAGly ligase (AMP-forming) activity","type":"related"},{"name":"glycyl translase activity","type":"related"},{"name":"glycyl-tRNA synthetase activity","type":"exact"},{"name":"glycyl-transfer RNA synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004820","terms_by_termid":{"GO:0004820":null}}


id: PBO:0081288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72A, pseudogene","termid":"PBO:0081288"}


id: PBO:0050004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP zinc finger 2","termid":"PBO:0050004"}


id: GO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata morphogenesis","synonyms":[{"name":"medulla morphogenesis","type":"related"},{"name":"myelencephalon morphogenesis","type":"related"}],"termid":"GO:0021579"}


id: PBO:0069040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 285, pseudogene","termid":"PBO:0069040"}


id: PBO:0034289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_plerology_relationship_with","termid":"PBO:0034289"}


id: GO:0061851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the lamellipodium which represents the distal part of the structure.","definition_xrefs":["PMID:22339865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"leading edge of lamellipodium","termid":"GO:0061851"}


id: PBO:0068086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 392","termid":"PBO:0068086"}


id: GO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.","definition_xrefs":["PMID:11713266","PMID:11756452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"methylosome","synonyms":[{"name":"20S methylosome","type":"exact"},{"name":"20S methyltransferase complex","type":"exact"}],"termid":"GO:0034709"}


id: GO:1990294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of a peptidyl-threonine to form peptidyl-O-phospho-L-threonine on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:19357077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"},{"relation_name":"is_a","term_name":"protein trans-autophosphorylation","termid":"GO:0036290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine trans-autophosphorylation","termid":"GO:1990294"}


id: GO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation.","definition_xrefs":["ISBN:0198542771","ISBN:0124020607","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst growth","termid":"GO:0001832"}


id: PBO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 2","termid":"PBO:0044219"}


id: PBO:0017868
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lissencephaly","termid":"PBO:0017868"}


id: PBO:0002098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIB","termid":"PBO:0002098"}


id: PR:O13731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubr11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.11","synonyms":[{"name":"N-end-recognizing protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubr11","type":"exact"}],"termid":"PR:O13731"}


id: PR:Q09713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neuroguidin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00112","PANTHER:PTHR13237:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.06","secondary_identifiers":["UniProtKB:Q09713"],"synonyms":[{"name":"Spom972h-NGDN","type":"exact"}],"termid":"PR:Q09713"}


id: PBO:0039531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 34B","termid":"PBO:0039531"}


id: GO:1990727
data:
  {"annotated_genes":["SJAG_02672","SJAG_04074","SJAG_01526"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89529,92669,98709],"is_not":false,"summary":null,"term":"GO:1990727"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in tubulin alpha-beta-subunit folding assembly consisting of beta-tubulin-TFC-D, alpha-tubulin-TFC-E and TFC-C, through which tubulin subunit association and dimer release occur.","definition_xrefs":["PMID:12445400","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01526":null,"SJAG_02672":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tubulin folding cofactor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990727","terms_by_termid":{"GO:1990727":null}}


id: PBO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 5","termid":"PBO:0045583"}


id: PR:O74983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 variant 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04653","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme spm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.05c","secondary_identifiers":["UniProtKB:O74983"],"synonyms":[{"name":"Spom972h-UBE2V1","type":"exact"},{"name":"UEV MMS2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme variant MMS2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74983"}


id: GO:0032928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide anion generation","synonyms":[{"name":"regulation of superoxide release","type":"exact"}],"termid":"GO:0032928"}


id: PBO:0031657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pseudohyphal_growth","termid":"PBO:0031657"}


id: PR:O74541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.02 gene.","definition_xrefs":["UniProtKB:O74541","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C777.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.02","synonyms":[{"name":"Spom972h-SPCC777.02","type":"exact"}],"termid":"PR:O74541"}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: GO:0036294
data:
  {"annotated_genes":["SJAG_00221","SJAG_00642","SJAG_04018","SJAG_01150","SJAG_02875"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106309,108236,97458,113698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[88294],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903298"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"},{"relation_name":"is_a","term_name":"cellular response to oxygen levels","termid":"GO:0071453"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_02875":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to decreased oxygen levels","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to lowered oxygen levels","type":"exact"}],"termid":"GO:0036294","terms_by_termid":{"GO:0071456":null,"GO:1903298":null}}


id: SO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron of a coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_intron_variant","synonyms":[{"name":"Jannovar:coding_transcript_intron_variant","type":"exact"},{"name":"coding sequence intron variant","type":"exact"}],"termid":"SO:0001969"}


id: GO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the centromeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, centromeric","termid":"GO:0071962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:0071960"}


id: PBO:0058843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8072","termid":"PBO:0058843"}


id: PBO:0027985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_septum_morphology","termid":"PBO:0027985"}


id: FYECO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ions","termid":"FYECO:0000030"}


id: PBO:0039990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 4","termid":"PBO:0039990"}


id: PBO:0029058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_decreased_numbers_during_vegetative_growth","termid":"PBO:0029058"}


id: GO:0019212
data:
  {"annotated_genes":["SJAG_04999","SJAG_03309","SJAG_04627","SJAG_03272","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70227,85254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[83665,74177,75185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019212","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: GO:0070453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of heme biosynthetic process","synonyms":[{"name":"regulation of haem biosynthesis","type":"exact"},{"name":"regulation of haem biosynthetic process","type":"exact"},{"name":"regulation of heme anabolism","type":"exact"},{"name":"regulation of heme biosynthesis","type":"exact"},{"name":"regulation of heme formation","type":"exact"},{"name":"regulation of heme synthesis","type":"exact"}],"termid":"GO:0070453"}


id: PBO:0030898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulation_phenotype_during_vegetative_growth","termid":"PBO:0030898"}


id: GO:2001131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}


id: PBO:0058870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9902-2","termid":"PBO:0058870"}


id: GO:0075506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where the viral genome passes through the nuclear pore complex (NPC) using the cellular importin transport machinery.","definition_xrefs":["PMID:22929056","VZ:989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of viral genome into host nucleus through nuclear pore complex via importin","synonyms":[{"name":"entry of viral genome into host nucleus via cellular importin transport through the nuclear pore complex","type":"exact"}],"termid":"GO:0075506"}


id: PBO:0087636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the endosomal Vps27p-Hse1p complex; complex is required for sorting of ubiquitinated membrane proteins into intralumenal vesicles prior to vacuolar degradation, as well as for recycling of Golgi proteins and formation of lumenal membranes","termid":"PBO:0087636"}


id: GO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoproturon + H2O = formaldehyde + monodemethylisoproturon + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isoproturon dimethylaminedehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"termid":"GO:0034568"}


id: PBO:0050393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A/B","termid":"PBO:0050393"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: PBO:0065474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 12","termid":"PBO:0065474"}


id: PBO:0081573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 500","termid":"PBO:0081573"}


id: PBO:0052314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA00895L pseudogene 1","termid":"PBO:0052314"}


id: FYPO:0004436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis occurs to a greater extent than normal. Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["PMID:17515930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased error-prone translesion synthesis","synonyms":[{"name":"increased DNA repair via error-prone translesion synthesis","type":"exact"},{"name":"increased error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"increased error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0004436"}


id: GO:0098501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate groups from a polynucleotide.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide dephosphorylation (obsolete GO:0098501)","termid":"GO:0098501"}


id: PBO:0048064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 13","termid":"PBO:0048064"}


id: GO:0010604
data:
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id: GO:1904648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18538940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to rotenone","termid":"GO:1904647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rotenone","termid":"GO:1904648"}


id: FYPO:0005201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to heat stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to heat stress","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to heat stress during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to heat stress during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to heat stress","type":"exact"}],"termid":"FYPO:0005201"}


id: PBO:0052533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 6","termid":"PBO:0052533"}


id: PBO:0045686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 6","termid":"PBO:0045686"}


id: PR:O14342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cactin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02969","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.12c","secondary_identifiers":["UniProtKB:O14342"],"synonyms":[{"name":"Spom972h-CACTIN","type":"exact"}],"termid":"PR:O14342"}


id: MOD:01991
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycinium (protonated glycine) residue to an N,N,N-trimethylglycine.","definition_xrefs":["ChEBI:17750","RESID:AA0619","PubMed:23818633","PubMed:23978223"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated glycine (glycinium) residue","termid":"MOD:01990"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine (from glycinium)","synonyms":[{"name":"N2Me3Gly","type":"exact"}],"termid":"MOD:01991"}


id: PBO:0064833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 10 pseudogene 1","termid":"PBO:0064833"}


id: GO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + ferricytochrome b1 + H2O = CO2 + acetate + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (cytochrome) activity (obsolete GO:0008985)","synonyms":[{"name":"pyruvate dehydrogenase (cytochrome) activity","type":"exact"},{"name":"pyruvate:ferricytochrome-b1 oxidoreductase activity","type":"related"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic (cytochrome b1) dehydrogenase activity","type":"related"}],"termid":"GO:0008985"}


id: PBO:0038273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion","termid":"PBO:0038273"}


id: RO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c stands in this relationship to p if and only if there exists some p' such that c is capable_of p', and p' is part_of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_part_of","termid":"RO:0002216"}


id: GO:0006495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete terminal O-glycosylation (obsolete GO:0006495)","synonyms":[{"name":"terminal O-glycosylation","type":"exact"}],"termid":"GO:0006495"}


id: MOD:01712
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01712"}


id: PBO:0049630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 33","termid":"PBO:0049630"}


id: GO:0102308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + erythromycin D = S-adenosyl-L-homocysteine + erythromycin B + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"erythromycin D 3''-o-methyltransferase activity","secondary_identifiers":["RHEA:32651","MetaCyc:RXN-12924"],"termid":"GO:0102308"}


id: GO:0016301
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id: PBO:0039933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 38","termid":"PBO:0039933"}


id: GO:0060479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features of a mature cell found in the lung. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung cell differentiation","synonyms":[{"name":"pulmonary cell differentiation","type":"exact"}],"termid":"GO:0060479"}


id: PBO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_paralogy_relationship_with","termid":"PBO:0034096"}


id: PR:Q8NKC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NKC2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.01c","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno102","type":"exact"}],"termid":"PR:Q8NKC2"}


id: PR:Q9C1W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adl1 gene.","definition_xrefs":["UniProtKB:Q9C1W9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.06","synonyms":[{"name":"DNA ligase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-adl1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W9"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0044248"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: PBO:0085821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed during sporulation; not required for sporulation, but gene exhibits genetic interactions with other genes required for sporulation","termid":"PBO:0085821"}


id: PBO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 1","termid":"PBO:0039715"}


id: GO:0034821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellol + NAD+ = citronellal + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"citronellol dehydrogenase activity","termid":"GO:0034821"}


id: PBO:0046496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERGIC and golgi 3","termid":"PBO:0046496"}


id: FYPO:0000338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the position or morphology of the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0000120"],"is_obsolete":false,"name":"abnormal mitotic spindle","secondary_identifiers":["FYPO:0000277"],"synonyms":[{"name":"abnormal mitotic spindle during vegetative growth","type":"exact"},{"name":"abnormal spindle during mitotic cell cycle","type":"related"},{"name":"mitotic spindle defects","type":"exact"},{"name":"spindle polarity defects","type":"related"}],"termid":"FYPO:0000338"}


id: PBO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.25","termid":"PBO:0004692"}


id: PBO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 helical C-terminal domain containing 1","termid":"PBO:0042972"}


id: GO:0098575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"lumenal side of lysosomal membrane","synonyms":[{"name":"internal leaflet of lysosomal membrane","type":"exact"},{"name":"internal side of lysosomal membrane","type":"exact"}],"termid":"GO:0098575"}


id: GO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of gastrointestinal epithelium","termid":"GO:0030277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial structure maintenance","synonyms":[{"name":"epithelial structure maintenance of intestine","type":"exact"},{"name":"maintenance of intestinal epithelium","type":"exact"}],"termid":"GO:0060729"}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: GO:0051428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for a peptide hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone receptor binding","termid":"GO:0051427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"peptide hormone receptor binding","synonyms":[{"name":"polypeptide hormone receptor binding","type":"exact"}],"termid":"GO:0051428"}


id: FYPO:0005497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements does not occur.","definition_xrefs":["PMID:26108447","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transcription from RNA polymerase II promoter","termid":"FYPO:0003796"},{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished transcription from CRE promoter","synonyms":[{"name":"abolished transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"abolished transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes abolished","type":"related"},{"name":"transcription from CRE promoter abolished","type":"exact"}],"termid":"FYPO:0005497"}


id: PBO:0060726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A12 pseudogene 1","termid":"PBO:0060726"}


id: PBO:0068209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: PBO:0071686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 18","termid":"PBO:0071686"}


id: PBO:0034775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, CUE domain absent Vps902","termid":"PBO:0034775"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","GO_REF:0000059","GOC:TermGenie","PMID:22723415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: PBO:0082891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase (CDK) catalytic subunit; master regulator of mitotic and meiotic cell cycles; alternately associates with G1, S, G2/M phase cyclins, which provide substrate specificity; regulates metabolism, basal transcription, chromosome dynamics, growth and morphogenesis; transcript induction in osmostress involves antisense RNA; human homologs CDK1, CDK2, CDK3 can complement yeast conditional cdc28 mutants; human CDK1, CDK2 can complement yeast cdc28 null mutant","termid":"PBO:0082891"}


id: PR:O14155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0047 protein YjbQ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01063","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0047 protein C4A8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.02c","secondary_identifiers":["UniProtKB:O14155"],"synonyms":[{"name":"Spom972h-yjbQ","type":"exact"}],"termid":"PR:O14155"}


id: PBO:0038939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 3","termid":"PBO:0038939"}


id: PBO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL30 antisense RNA 1","termid":"PBO:0052517"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_02550","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112246],"is_not":false,"summary":null,"term":"GO:0007267"},{"annotations":[111950],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0048168"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_02550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null,"GO:0048168":null}}


id: PBO:0079766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFL1 antisense RNA 1","termid":"PBO:0079766"}


id: GO:0033993
data:
  {"annotated_genes":["SJAG_03760"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032526"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipid","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033993","terms_by_termid":{"GO:0032526":null}}


id: GO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 3' phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004527","GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","secondary_identifiers":["EC:3.1.16.-"],"termid":"GO:0016797"}


id: PBO:0030013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Calcofluor_White","termid":"PBO:0030013"}


id: PBO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 6","termid":"PBO:0060105"}


id: PATO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000997 relative viscosity value (obsolete PATO:0000997)","termid":"PATO:0000997"}


id: GO:0032207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"},{"relation_name":"regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0032200"],"is_obsolete":false,"name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"}


id: GO:0032413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ion transmembrane transporter activity","synonyms":[{"name":"down regulation of ion transporter activity","type":"exact"},{"name":"down-regulation of ion transporter activity","type":"exact"},{"name":"downregulation of ion transporter activity","type":"exact"},{"name":"inhibition of ion transporter activity","type":"narrow"},{"name":"negative regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032413"}


id: PBO:0028989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_small_RNA_level_(obsolete_FYPO:0003261)","termid":"PBO:0028989"}


id: FYPO:0003246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic S phase progression","synonyms":[{"name":"normal S phase progression during mitotic cell cycle","type":"exact"},{"name":"normal mitotic S phase progression during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle progression in S","type":"exact"}],"termid":"FYPO:0003246"}


id: FYPO:0000027
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal cell wall during mitotic cell cycle","type":"related"},{"name":"cell wall defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000027","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:1901195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"positively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0002181","GO:0065003"],"is_obsolete":false,"name":"positive regulation of formation of translation preinitiation complex","synonyms":[{"name":"activation of formation of translation pre-initiation complex","type":"exact"},{"name":"activation of formation of translation preinitiation complex","type":"narrow"},{"name":"activation of translation preinitiation complex assembly","type":"exact"},{"name":"positive regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"positive regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"upregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"upregulation of formation of translation preinitiation complex","type":"exact"},{"name":"upregulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901195"}


id: GO:0052682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + H2O = epi-cedrol + diphosphate.","definition_xrefs":["RHEA:26115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"epi-cedrol synthase activity","secondary_identifiers":["EC:4.2.3.39","MetaCyc:RXN-10004","KEGG_REACTION:R09140"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase (8-epi-cedrol-forming) activity","type":"exact"},{"name":"8-epicedrol synthase activity","type":"exact"},{"name":"epicedrol synthase activity","type":"exact"}],"termid":"GO:0052682"}


id: PATO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's origin or development at an unusual time or out of the regular sequence.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic","termid":"PATO:0000692"}


id: PBO:0077114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 23","termid":"PBO:0077114"}


id: MOD:01839
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"lanthionine","termid":"MOD:01841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lanthionine","termid":"MOD:01839"}


id: GO:0055019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle fiber development","synonyms":[{"name":"down regulation of cardiac muscle fiber development","type":"exact"},{"name":"down-regulation of cardiac muscle fiber development","type":"exact"},{"name":"downregulation of cardiac muscle fiber development","type":"exact"},{"name":"inhibition of cardiac muscle fiber development","type":"narrow"},{"name":"negative regulation of cardiac muscle fibre development","type":"exact"},{"name":"negative regulation of heart muscle fiber development","type":"related"}],"termid":"GO:0055019"}


id: PBO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 1","termid":"PBO:0047702"}


id: PBO:0051720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSM transcriptional repressor 1","termid":"PBO:0051720"}


id: GO:0030968
data:
  {"annotated_genes":["SJAG_04262","SJAG_04471","SJAG_04283","SJAG_04118","SJAG_04103","SJAG_04435","SJAG_00530","SJAG_02875","SJAG_00681","SJAG_03482","SJAG_02601","SJAG_00790","SJAG_03841","SJAG_01516","SJAG_00226","SJAG_01768","SJAG_03611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75521,85538,88293,88969,94884,97475,103572,106025,110434,110708,110839,112718,113487,113929,114088],"is_not":false,"summary":null,"term":"GO:0030968"},{"annotations":[89117,76815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation.","definition_xrefs":["GOC:mah","PMID:12042763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"part_of","term_name":"cellular response to unfolded protein","termid":"GO:0034620"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00530":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_02875":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum unfolded protein response","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER unfolded protein response","type":"exact"},{"name":"SREBP-mediated signalling pathway","type":"related"},{"name":"erUPR","type":"exact"}],"termid":"GO:0030968","terms_by_termid":{"GO:0030968":null,"GO:0036498":null}}


id: GO:0102771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + a dihydroceramide = NADP + H2O + an alpha hydroxydihydroceramide.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sphingolipid very long chain fatty acid alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7796","RHEA:46512"],"termid":"GO:0102771"}


id: GO:0019021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of deoxyribonucleic acid.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA viral genome (obsolete GO:0019021)","termid":"GO:0019021"}


id: PBO:0086515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species","termid":"PBO:0086515"}


id: GO:0075179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont calcium or calmodulin-mediated signal transduction as a result of detecting host molecules in, on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcium or calmodulin-mediated signal transduction in response to host (obsolete GO:0075179)","synonyms":[{"name":"negative regulation of symbiont Ca++ or calmodulin-mediated signal transduction in response to host","type":"exact"},{"name":"negative regulation of symbiont calcium or calmodulin-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075179"}


id: PBO:0089154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Swd22","termid":"PBO:0089154"}


id: PBO:0071795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40 pseudogene 1","termid":"PBO:0071795"}


id: GO:1903240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of positive regulation of the force of heart contraction by chemical signal.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17242280","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of positive regulation of the force of heart contraction by chemical signal (obsolete GO:1903240)","synonyms":[{"name":"down regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"down regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"down-regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"down-regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"downregulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"downregulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"inhibition of positive regulation of the force of heart contraction by chemical signal","type":"narrow"},{"name":"inhibition of positive regulation of the force of heart muscle contraction by chemical signal","type":"narrow"},{"name":"negative regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"negative regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:1903240"}


id: FYPO:0001574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle has two poles but is otherwise structurally abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}


id: GO:0048072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye pigmentation","termid":"GO:0048072"}


id: PBO:0043744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2 pseudogene 2","termid":"PBO:0043744"}


id: PR:O13339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A telomerase reverse transcriptase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12066:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.14c","secondary_identifiers":["UniProtKB:O13339"],"synonyms":[{"name":"SPBC29A3.14c","type":"related"},{"name":"Spom972h-TERT","type":"exact"},{"name":"telomerase catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13339"}


id: PBO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase ecto","termid":"PBO:0061563"}


id: GO:0072050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-shaped body morphogenesis","termid":"GO:0072050"}


id: FYECO:0000105
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PMID:12653111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited thiamine","termid":"FYECO:0000105"}


id: GO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 thiosulfate + 2 ferricytochrome c = tetrathionate + 2 ferrocytochrome c.","definition_xrefs":["EC:1.8.2.2","MetaCyc:THIOSULFATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","termid":"GO:0016669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thiosulfate dehydrogenase activity","secondary_identifiers":["RHEA:20549"],"synonyms":[{"name":"tetrathionate synthase activity","type":"related"},{"name":"thiosulfate oxidase activity","type":"related"},{"name":"thiosulfate-acceptor oxidoreductase activity","type":"related"},{"name":"thiosulfate-oxidizing enzyme","type":"related"},{"name":"thiosulfate:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"thiosulphate dehydrogenase activity","type":"exact"}],"termid":"GO:0050338"}


id: GO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the direction of cell growth.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of direction of cell growth","termid":"GO:0061390"}


id: PBO:0082130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin assembly factor; C-terminal WCA domain activates Arp2/3 complex-mediated nucleation of branched actin filaments, polyproline domain nucleates actin filaments independent of Arp2/3; mutants are defective in endocytosis, bud site selection, cytokinesis; human homolog WAS (Wiskott-Aldrich Syndrome) implicated in severe immunodeficiency; human WAS complements yeast null mutant, but only in presence of WIPF1, which mediates localization of WAS to cortical patches","termid":"PBO:0082130"}


id: PBO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V","termid":"PBO:0042750"}


id: PBO:0040772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 7","termid":"PBO:0040772"}


id: GO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-threonine to form peptidyl-L-threonine methyl ester.","definition_xrefs":["RESID:AA0507"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-threonine methyl ester biosynthetic process from peptidyl-threonine (obsolete GO:0044608)","synonyms":[{"name":"peptidyl-threonine esterification","type":"exact"}],"termid":"GO:0044608"}


id: FYPO:0002996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to hydrogen peroxide","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to H2O2","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002996"}


id: GO:0008774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH + H+.","definition_xrefs":["EC:1.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (acetylating) activity","secondary_identifiers":["MetaCyc:ACETALD-DEHYDROG-RXN","RHEA:23288"],"synonyms":[{"name":"ADA","type":"related"},{"name":"DmpF","type":"related"},{"name":"acetaldehyde:NAD+ oxidoreductase (CoA-acetylating)","type":"related"},{"name":"acylating acetaldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (acylating) activity","type":"related"}],"termid":"GO:0008774"}


id: PBO:0089319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER resident protein acetylase Sdg1","termid":"PBO:0089319"}


id: PBO:0040989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA2-SMG1P6 readthrough","termid":"PBO:0040989"}


id: GO:0021894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cerebral cortex GABAergic interneuron over time, from initial commitment to its fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","PMID:12626695","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"cerebral cortex GABAergic interneuron differentiation","termid":"GO:0021892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex GABAergic interneuron development","termid":"GO:0021894"}


id: PBO:0041742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin regulated spectrin associated protein family member 3","termid":"PBO:0041742"}


id: MOD:01518
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01518"}


id: PBO:0058978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutL homolog 3","termid":"PBO:0058978"}


id: PR:G2TRN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.01 gene.","definition_xrefs":["UniProtKB:G2TRN6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl-alcohol dehydrogenase C750.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.01","synonyms":[{"name":"Spom972h-SPAC750.01","type":"exact"}],"termid":"PR:G2TRN6"}


id: PBO:0030445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_separation_after_cytokinesis","termid":"PBO:0030445"}


id: PBO:0076120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 4","termid":"PBO:0076120"}


id: SO:1000079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000079 sequence_variation_affecting_transcript_sequence (obsolete SO:1000079)","synonyms":[{"name":"mutation affecting transcript sequence","type":"exact"},{"name":"sequence variation affecting transcript sequence","type":"exact"}],"termid":"SO:1000079"}


id: GO:0060519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules that contributes to the elongation of the primary prostatic bud.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in prostatic bud elongation","termid":"GO:0060519"}


id: PBO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet3","termid":"PBO:0017812"}


id: PBO:0079014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (anticodon TCA) 2-1","termid":"PBO:0079014"}


id: PBO:0064030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 64","termid":"PBO:0064030"}


id: PBO:0065419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 6","termid":"PBO:0065419"}


id: GO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pole plasm assembly","secondary_identifiers":["GO:0048113"],"termid":"GO:0007315"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: FYPO:0006015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has more than one septum, and forms a mating projection.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multiseptate cell with shmoo","synonyms":[{"name":"large non-mated cells","type":"related"},{"name":"multiseptate shmooing cell","type":"exact"}],"termid":"FYPO:0006015"}


id: PBO:0082879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin; structural protein of SCF complexes (which also contain Skp1p, Cdc34p, Hrt1p and an F-box protein) involved in ubiquitination; SCF promotes the G1-S transition by targeting G1 cyclins and the Cln-CDK inhibitor Sic1p for degradation; human homolog CUL1 can complement yeast cdc53 null mutant","termid":"PBO:0082879"}


id: PBO:0041450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 putative open reading frame 163","termid":"PBO:0041450"}


id: PBO:0029653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_stress","termid":"PBO:0029653"}


id: PBO:0060157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 5 (pseudogene)","termid":"PBO:0060157"}


id: PBO:0029333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation","termid":"PBO:0029333"}


id: PBO:0061938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily N member 1","termid":"PBO:0061938"}


id: GO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete replicative cell aging (obsolete GO:0001302)","synonyms":[{"name":"replicative cell ageing","type":"exact"}],"termid":"GO:0001302"}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: MOD:00748
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a pterin group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterin modified residue","synonyms":[{"name":"PterRes","type":"exact"}],"termid":"MOD:00748"}


id: PBO:0076477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 2, ATP binding cassette subfamily B member","termid":"PBO:0076477"}


id: PBO:0067573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 728, pseudogene","termid":"PBO:0067573"}


id: PBO:0065506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine phosphatase","termid":"PBO:0065506"}


id: PBO:0040658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 2","termid":"PBO:0040658"}


id: PBO:0043184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine inducible SH2 containing protein","termid":"PBO:0043184"}


id: GO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"},{"relation_name":"part_of","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in positive regulation of apoptotic process","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptosis","type":"narrow"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptotic process","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of apoptosis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of apoptotic process","type":"exact"}],"termid":"GO:0044337"}


id: MOD:00341
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-methyl-L-isoleucine.","definition_xrefs":["RESID:AA0336","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated isoleucine","termid":"MOD:00715"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-methylamino-3-methylpentanoic acid","type":"exact"},{"name":"MOD_RES N-methylisoleucine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-isoleucine","type":"exact"},{"name":"N-methylated L-isoleucine","type":"exact"},{"name":"N-methylisoleucine","type":"exact"},{"name":"NMe1Ile","type":"exact"}],"termid":"MOD:00341"}


id: PBO:0074868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 52","termid":"PBO:0074868"}


id: GO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot system development","secondary_identifiers":["GO:0022621"],"synonyms":[{"name":"shoot development","type":"exact"}],"termid":"GO:0048367"}


id: PBO:0082245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of heterooctameric phosphofructokinase; involved in glycolysis, indispensable for anaerobic growth, activated by fructose-2,6-bisphosphate and AMP, mutation inhibits glucose induction of cell cycle-related genes","termid":"PBO:0082245"}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17875938"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


id: GO:0086065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates interactions between a cell and its surroundings that contributes to the process of cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}


id: GO:0061084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"negatively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein refolding","termid":"GO:0061084"}


id: PBO:0028537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028537"}


id: GO:0048833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of floral organs formed in a floral whorl.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ number","termid":"GO:0048832"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ number","termid":"GO:0048833"}


id: PBO:0045510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 2","termid":"PBO:0045510"}


id: GO:0120270
data:
  {"annotated_genes":["SJAG_02723","SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[103038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.","definition_xrefs":["GOC:krc","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0033621"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0044248","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120270","terms_by_termid":{"GO:0120271":null,"GO:0120272":null}}


id: GO:0141119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that maintains methylated cytosine in newly synthesized DNA following DNA replication. After the establishment of novel DNA methylation marks, the newly created patterns must be faithfully transmitted by maintenance DNA methyltransferases during cell division.","definition_xrefs":["PMID:20142834","PMID:26077819","PMID:11005794","PMID:34968368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"chromosomal DNA methylation maintenance following DNA replication","synonyms":[{"name":"DNA methylation","type":"broad"},{"name":"DNA methylation maintenance","type":"broad"},{"name":"DNA methylation maintenance following DNA replication","type":"exact"},{"name":"DNA methylation maintenance following cell division","type":"exact"},{"name":"genome methylation maintenance following DNA replication","type":"exact"}],"termid":"GO:0141119"}


id: GO:0010814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the neuropeptide substance P.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide catabolic process","termid":"GO:0010813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"substance P catabolic process","termid":"GO:0010814"}


id: GO:0097126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin B2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin B2-CDK1 complex","termid":"GO:0097126"}


id: GO:0098787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of an immature mRNA transcript to produce one or more more mature mRNA transcripts, prior to translation into polypeptide.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage involved in mRNA processing (obsolete GO:0098787)","termid":"GO:0098787"}


id: PBO:0042494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 2","termid":"PBO:0042494"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: PBO:0080183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 4","termid":"PBO:0080183"}


id: PBO:0070775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 5","termid":"PBO:0070775"}


id: PBO:0028249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actin_cytoskeleton","termid":"PBO:0028249"}


id: GO:0051303
data:
  {"annotated_genes":["SJAG_05260","SJAG_02814","SJAG_04745","SJAG_07002","SJAG_02731","SJAG_00794","SJAG_02346","SJAG_01601","SJAG_02045","SJAG_01263","SJAG_05290","SJAG_01837","SJAG_03287","SJAG_00768","SJAG_03092","SJAG_01370","SJAG_02807","SJAG_02737","SJAG_04412","SJAG_03926","SJAG_00678","SJAG_05226","SJAG_00756","SJAG_02336","SJAG_00418","SJAG_04040","SJAG_03540","SJAG_01777","SJAG_03048","SJAG_05266","SJAG_04884","SJAG_04280","SJAG_02761","SJAG_02624","SJAG_03220","SJAG_00207","SJAG_01224","SJAG_01805","SJAG_03698","SJAG_01613","SJAG_01775","SJAG_03680","SJAG_05220","SJAG_03989","SJAG_01082","SJAG_00082","SJAG_00335","SJAG_05319","SJAG_00646","SJAG_00930","SJAG_01278","SJAG_03685","SJAG_01371","SJAG_04140","SJAG_04623","SJAG_03126","SJAG_00918","SJAG_03327","SJAG_02286","SJAG_00302","SJAG_03543","SJAG_01297","SJAG_04076","SJAG_03683","SJAG_01538","SJAG_02451","SJAG_03437","SJAG_05295","SJAG_05196","SJAG_01211","SJAG_04508","SJAG_03217","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89877,83679],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[114847,94055,96594,71794,72529,101825,106825,91653,83815,113225,115376,86902,83564,85933,87297,106783,108207,74958],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[94792,113771,86183,97569,110405,112194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[104689],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[102320,85640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[101442,96115,83197,99092,85641],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[92844,114264,112631,114403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[110624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[105657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051310"},{"annotations":[90836,106370],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[100214,95421,90248,94794,104693],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[85623,99848,95315,100215,103905,109176,109177,109175,109834,85001,86890,85234,105325,98700,90249,110728,89879,106354,110407,115406,94796,113629,96731,104694,111144],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[98624],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[108495,101522,112698],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[113382,89853,85888,107706,98643],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0140429"},{"annotations":[113385],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[105586],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[91396,113631,103907,110411,98701,91654,104246,97573,105327,106356,85625,106826,85003,94800,109835,89858,96733,110730,105587,101828,86892,106786,94056,112613],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[113660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle 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of chromosome localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromosome positioning","type":"exact"},{"name":"establishment of chromosome localisation","type":"exact"}],"termid":"GO:0051303","terms_by_termid":{"GO:0031134":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0051310":null,"GO:0051315":null,"GO:0051455":null,"GO:0051456":null,"GO:0070197":null,"GO:0099606":null,"GO:0099607":null,"GO:0140405":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: GO:0035899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of blood coagulation in another organism. Blood coagulation is the sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot.","definition_xrefs":["GOC:fj","PMID:30563903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of blood coagulation in another organism","termid":"GO:0035806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of blood coagulation in another organism","synonyms":[{"name":"disruption of blood coagulation in other organism","type":"exact"},{"name":"down-regulation of blood coagulation in other organism","type":"exact"},{"name":"downregulation of blood coagulation in other organism","type":"exact"},{"name":"inhibition of blood coagulation in other organism","type":"narrow"},{"name":"negative regulation of blood clotting in other organism","type":"exact"},{"name":"negative regulation of blood coagulation in another organism","type":"related"},{"name":"negative regulation of blood coagulation in other organism","type":"exact"},{"name":"suppression of blood clotting in another organism","type":"exact"}],"termid":"GO:0035899"}


id: PBO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger-like protein Ini1","termid":"PBO:0001575"}


id: PATO:0001148
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001148 relative resistance value (obsolete PATO:0001148)","termid":"PATO:0001148"}


id: PBO:0028208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_cytoplasmic_protein_localization","termid":"PBO:0028208"}


id: GO:0106347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-O-methyladenosine in U2 snRNA + S-adenosyl-L-methionine = an N6-methyl-2'-O-methyladenosine in U2 snRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:62672","PMID:31913360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"U2 snRNA 2'-O-methyladenosine m6 methyltransferase activity","termid":"GO:0106347"}


id: PBO:0048890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 10","termid":"PBO:0048890"}


id: PBO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lyase deficiency","termid":"PBO:0025512"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: PBO:0050053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, T (pseudogene)","termid":"PBO:0050053"}


id: PBO:0029787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_septated_cell_with_abnormal_morphology","termid":"PBO:0029787"}


id: GO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP1 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"EP1 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP1 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP1 receptor binding","type":"exact"}],"termid":"GO:0031864"}


id: PBO:0084447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; MAN2 has a paralog, DSF1, that arose from a segmental duplication","termid":"PBO:0084447"}


id: PBO:0082949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic NAD(+)-dependent protein deacetylase; deacetylation targets are primarily cytoplasmic proteins; member of the silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases; modulates nucleolar (rDNA) and telomeric silencing; possesses NAD(+)-dependent histone deacetylase activity in vitro; contains a nuclear export signal (NES); function regulated by its nuclear export","termid":"PBO:0082949"}


id: PBO:0039444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKHD1 divergent transcript","termid":"PBO:0039444"}


id: GO:0045341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class I biosynthetic process","synonyms":[{"name":"MHC class I anabolism","type":"exact"},{"name":"MHC class I biosynthesis","type":"exact"},{"name":"MHC class I formation","type":"exact"},{"name":"MHC class I synthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045341"}


id: PBO:0074672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 58","termid":"PBO:0074672"}


id: GO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein heavy chain (obsolete GO:0001687)","synonyms":[{"name":"cytoplasmic dynein heavy chain","type":"exact"}],"termid":"GO:0001687"}


id: FYPO:0000832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"elongated nucleus","termid":"FYPO:0006663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"elongated nucleus during vegetative growth","synonyms":[{"name":"elongated nuclei during vegetative growth","type":"exact"},{"name":"elongated nucleus during mitotic cell cycle","type":"related"},{"name":"long nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0000832"}


id: PBO:0048308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 19","termid":"PBO:0048308"}


id: GO:0090398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest.","definition_xrefs":["GOC:BHF","PMID:28682291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular senescence","termid":"GO:0090398"}


id: PBO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.21","termid":"PBO:0002870"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["PMID:9168977","GOC:bhm","PMID:30621730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: PBO:0090211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sed5","termid":"PBO:0090211"}


id: PBO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C21","termid":"PBO:0045242"}


id: PBO:0027395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027395"}


id: PBO:0027046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_2-oxoglutarate_dioxygenase_activity","termid":"PBO:0027046"}


id: GO:0033770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: liquiritigenin + O2 + [reduced NADPH--hemoprotein reductase] = 2,4',7-trihydroxyisoflavanone + H2O + [oxidized NADPH--hemoprotein reductase] and (2S)-naringenin + O2 + [reduced NADPH--hemoprotein reductase] = 2,4',5,7-tetrahydroxyisoflavanone + H2O + [oxidized NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyisoflavanone synthase activity","secondary_identifiers":["GO:0102604","MetaCyc:RXN-3283","MetaCyc:RXN-7750","MetaCyc:RXN-1541","GO:0102668"],"synonyms":[{"name":"isoflavonoid synthase","type":"broad"}],"termid":"GO:0033770"}


id: PBO:0038322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_disease_name","termid":"PBO:0038322"}


id: GO:0046737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a cell-mediated host defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of cell-mediated immune response in host by virus (obsolete GO:0046737)","synonyms":[{"name":"active induction of cell-mediated immune response in host by virus","type":"related"},{"name":"active viral induction of cell-mediated immune response in host","type":"exact"}],"termid":"GO:0046737"}


id: PBO:0049878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hephaestin like 1","termid":"PBO:0049878"}


id: GO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-5 activity (obsolete GO:0004204)","synonyms":[{"name":"caspase-5 activity","type":"exact"}],"termid":"GO:0004204"}


id: GO:0000407
data:
  {"annotated_genes":["SJAG_01783","SJAG_02699","SJAG_02441","SJAG_04963","SJAG_01135","SJAG_04655","SJAG_02640","SJAG_03136","SJAG_04219","SJAG_04502","SJAG_04860","SJAG_00115","SJAG_00645","SJAG_01283","SJAG_03976","SJAG_04991","SJAG_01561","SJAG_04232","SJAG_01382","SJAG_01274","SJAG_01876","SJAG_03100","SJAG_00763","SJAG_00724","SJAG_02414","SJAG_00114","SJAG_00059","SJAG_06309","SJAG_03851","SJAG_05017","SJAG_01251"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71387,72312,77504,85482,87537,95591,101169,108033,109908,110262],"is_not":false,"summary":null,"term":"GO:0000407"},{"annotations":[90685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097632"},{"annotations":[78221,90878,111877,78559,72672,71913,72341,73068,88589,100932,99892,95886,83640,108213,88931,106745,78356,111814,71733,105084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034045"}]},"cv_name":"cellular_component","definition":"Punctate structures proximal to the endoplasmic reticulum which are the sites where the Atg machinery assembles upon autophagy induction.","definition_xrefs":["PMID:11689437","GOC:elh","PMID:12048214","PMID:12554655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00645":null,"SJAG_00724":null,"SJAG_00763":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01561":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03851":null,"SJAG_03976":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phagophore assembly site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PAS","type":"exact"},{"name":"perivacuolar space","type":"narrow"},{"name":"pre-autophagosomal structure","type":"narrow"}],"termid":"GO:0000407","terms_by_termid":{"GO:0000407":null,"GO:0034045":null,"GO:0097632":null}}


id: GO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: GO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The V1 domain of a proton-transporting V-type ATPase found in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V1 domain","termid":"GO:0033180"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting V-type ATPase complex","termid":"GO:0033181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"plasma membrane proton-transporting V-type ATPase, V1 domain","synonyms":[{"name":"plasma membrane hydrogen ion-transporting ATPase V1 domain","type":"exact"}],"termid":"GO:0000223"}


id: GO:0140698
data:
  {"annotated_genes":["SJAG_01745","SJAG_02698","SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84933,87253,90671],"is_not":false,"summary":null,"term":"GO:0140698"}]},"cv_name":"biological_process","definition":"The process in which physical connections are formed between sub-telomeric heterochromatin and the nuclear envelope facilitating bouquet formation.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_02698":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"attachment of telomeric heterochromatin to nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to nuclear envelope","type":"broad"},{"name":"attachment of telomeric chromatin to nuclear envelope","type":"broad"},{"name":"heterochromatin organization","type":"broad"}],"termid":"GO:0140698","terms_by_termid":{"GO:0140698":null}}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: PBO:0049929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase","termid":"PBO:0049929"}


id: GO:0050200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-O-alk-1-enyl-glycero-3-phosphocholine = CoA + plasmenylcholine.","definition_xrefs":["EC:2.3.1.25","MetaCyc:PLASMALOGEN-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"plasmalogen synthase activity","synonyms":[{"name":"1-alkenyl-glycero-3-phosphorylcholine:acyl-CoA acyltransferase activity","type":"related"},{"name":"O-1-alkenylglycero-3-phosphorylcholine acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-O-alk-1-enyl-glycero-3-phosphocholine 2-O-acyltransferase activity","type":"related"},{"name":"lysoplasmenylcholine acyltransferase activity","type":"related"}],"termid":"GO:0050200"}


id: PBO:0016097
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POmbe Boi","termid":"PBO:0016097"}


id: PBO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 3","termid":"PBO:0060015"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: PBO:0090306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor","termid":"PBO:0090306"}


id: PBO:0005255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase (predicted)","termid":"PBO:0005255"}


id: PBO:0045334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 9","termid":"PBO:0045334"}


id: PBO:0109916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Gls1","termid":"PBO:0109916"}


id: GO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: GO:1901541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"ent-pimara-8(14),15-diene metabolic process","termid":"GO:1901539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901541"}


id: PBO:0058455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5094","termid":"PBO:0058455"}


id: PATO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality of having increased odor.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"odorous","termid":"PATO:0001331"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased odor","termid":"PATO:0001893"}


id: GO:0019321
data:
  {"annotated_genes":["SJAG_04276","SJAG_02010","SJAG_04660","SJAG_03958","SJAG_00070","SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91094,91847,97417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[100685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[73976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006014"},{"annotations":[97418,91848,91096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042732"},{"annotations":[115745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pentose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pentose metabolism","type":"exact"}],"termid":"GO:0019321","terms_by_termid":{"GO:0005998":null,"GO:0006014":null,"GO:0019303":null,"GO:0019568":null,"GO:0042732":null,"GO:0042843":null}}


id: GO:0098716
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112686],"is_not":false,"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel cations from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transport","termid":"GO:0035444"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"nickel cation import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090509"],"synonyms":[{"name":"nickel cation import into cell","type":"exact"}],"termid":"GO:0098716","terms_by_termid":{"GO:0098716":null}}


id: FYPO:0002652
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116174,116160,116162,116171,116159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more intracellular endomembrane system structures than normal. The endomembrane system includes the endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope; in this phenotype, excess plasma membrane does not accumulate, but increased amounts of one or more internal intracellular endomembrane system structures may be present.","definition_xrefs":["PomBase:mah","PMID:21899677","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system","termid":"FYPO:0002404"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":5,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"excess intracellular endomembrane system present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_01906","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","nem1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta"],"synonyms":[{"name":"accumulation of internal endomembrane system structures","type":"exact"},{"name":"excess intracellular endomembrane system present during mitotic cell cycle","type":"related"},{"name":"excess intracellular endomembrane system present during vegetative growth","type":"exact"},{"name":"increased level of intracellular endomembrane system structures","type":"related"},{"name":"intracellular endomembrane system structures present in greater numbers","type":"exact"}],"termid":"FYPO:0002652","terms_by_termid":{"FYPO:0001784":null,"FYPO_EXT:0000001":null}}


id: PBO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop58 (predicted)","termid":"PBO:0000636"}


id: FYPO:0001803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one septum apiece during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete multiseptate cell during cellular response to caffeine (obsolete FYPO:0001803)","synonyms":[{"name":"multiseptate cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"multiseptate cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"multiseptate in response to caffeine","type":"exact"}],"termid":"FYPO:0001803"}


id: PBO:0033802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair_via_homologous_recombination","termid":"PBO:0033802"}


id: GO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + ATP = N-acetyl-D-glucosamine 6-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:17417","EC:2.7.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosamine kinase activity","secondary_identifiers":["MetaCyc:N-ACETYLGLUCOSAMINE-KINASE-RXN","Reactome:R-HSA-6803771","KEGG_REACTION:R01201"],"synonyms":[{"name":"2-acetylamino-2-deoxy-D-glucose kinase activity","type":"related"},{"name":"ATP:2-acetylamino-2-deoxy-D-glucose 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acetyl-D-glucosamine 6-phosphotransferase activity","type":"related"},{"name":"GlcNAc kinase activity","type":"related"},{"name":"acetylaminodeoxyglucokinase activity","type":"related"},{"name":"acetylglucosamine kinase (phosphorylating)","type":"related"}],"termid":"GO:0045127"}


id: GO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses fatty-acyl-CoA synthase activity.","definition_xrefs":["BRENDA:2.3.1.86","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase complex","synonyms":[{"name":"fatty acyl CoA synthase complex","type":"exact"}],"termid":"GO:0005836"}


id: GO:0005114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II transforming growth factor beta receptor.","definition_xrefs":["PMID:11252892","GOC:mah","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type II transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta type II binding","type":"exact"},{"name":"punt binding","type":"narrow"},{"name":"punt ligand","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"},{"name":"transforming growth factor beta receptor type II binding","type":"exact"},{"name":"type II TGF-beta binding","type":"exact"}],"termid":"GO:0005114"}


id: PBO:0028445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0028445"}


id: GO:0098643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular assembly of fibrillar collagen complexes in the form of a long fiber (fibril) with transverse striations (bands).","definition_xrefs":["GOC:dos","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex of collagen trimers","termid":"GO:0098644"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"banded collagen fibril","termid":"GO:0098643"}


id: PBO:0086334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton:glutathione antiporter; localized to the vacuolar and plasma membranes; expressed at a very low level; potential role in resistance to oxidative stress and modulation of the PKA pathway; GEX2 has a paralog, GEX1, that arose from a segmental duplication","termid":"PBO:0086334"}


id: PBO:0054222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1603","termid":"PBO:0054222"}


id: PBO:0082813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved E2-like conjugating enzyme; mediates formation of the Atg12p-Atg5p conjugate, which is a critical step in autophagy","termid":"PBO:0082813"}


id: FYPO:0005506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mitochondrial transport mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mitochondrial transport mRNAs are transcribed from genes whose products are involved in transport to or from the mitochondrion.","definition_xrefs":["PMID:23236291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of mitochondrial transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of mitochondrial transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mitochondrial transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased mitochondrial transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0005506"}


id: PBO:0079232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC7B antisense RNA 1","termid":"PBO:0079232"}


id: PBO:0066193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B divergent transcript","termid":"PBO:0066193"}


id: GO:0051573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 methylation (obsolete GO:0051573)","synonyms":[{"name":"down regulation of histone H3-K9 methylation","type":"exact"},{"name":"down-regulation of histone H3-K9 methylation","type":"exact"},{"name":"downregulation of histone H3-K9 methylation","type":"exact"},{"name":"inhibition of histone H3-K9 methylation","type":"narrow"}],"termid":"GO:0051573"}


id: GO:0051306
data:
  {"annotated_genes":["SJAG_04699","SJAG_01082","SJAG_03048","SJAG_03350","SJAG_01837","SJAG_00883","SJAG_04661","SJAG_03126","SJAG_02169","SJAG_02336","SJAG_01679","SJAG_03351","SJAG_01297","SJAG_04259","SJAG_03681","SJAG_02498","SJAG_01805","SJAG_04999","SJAG_01330","SJAG_00460","SJAG_02186","SJAG_04968","SJAG_00146","SJAG_02542","SJAG_01956","SJAG_02451","SJAG_02380","SJAG_04573","SJAG_05236","SJAG_00666","SJAG_05329","SJAG_03353","SJAG_04884","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86244,87681,91247,92721,95793,97019,98088,114282],"is_not":false,"summary":null,"term":"GO:0051306"},{"annotations":[100211,112587,108494,86624,103630,104688,110404,110898,95776],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106371,112214,95626,98049,102692,111145],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[99570],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000816"},{"annotations":[90250],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[113379],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[98642,93845,111413,89852,107890,96335,98364],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[113381],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905824"},{"annotations":[95799],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome separation during mitosis","type":"related"},{"name":"mitotic chromosome separation","type":"related"},{"name":"mitotic sister chromatid resolution","type":"exact"},{"name":"sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:0051306","terms_by_termid":{"GO:0007094":null,"GO:0045842":null,"GO:0051306":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: PBO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Z, alpha-1,2-mannosyltransferase Smp3","termid":"PBO:0090387"}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: PBO:0062457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 130 pseudogene","termid":"PBO:0062457"}


id: GO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051329"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051329","GO:0008150"],"is_obsolete":false,"name":"mitotic S phase","synonyms":[{"name":"S phase of mitotic cell cycle","type":"exact"},{"name":"S-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000084"}


id: PBO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member E, pseudogene","termid":"PBO:0046981"}


id: PBO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,B","termid":"PBO:0005180"}


id: GO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of type I interferon-mediated signaling pathway","termid":"GO:0060338"},{"relation_name":"negatively_regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060339"}


id: PBO:0062859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoraplin","termid":"PBO:0062859"}


id: PBO:0062970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 13","termid":"PBO:0062970"}


id: GO:0039524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts mRNA processing in its host. mRNA processing is the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:903","GOC:bf","PMID:16571812","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA processing","synonyms":[{"name":"inhibition by virus of host mRNA processing","type":"narrow"},{"name":"inhibition of host mRNA processing","type":"exact"},{"name":"inhibition of host pre-mRNA processing by virus","type":"narrow"},{"name":"negative regulation of host mRNA processing","type":"broad"},{"name":"suppression by virus of host mRNA processing","type":"narrow"}],"termid":"GO:0039524"}


id: MOD:01559
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01559"}


id: PBO:0003784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Tu Tuf1","termid":"PBO:0003784"}


id: PBO:0045349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyldiphosphatase 1","termid":"PBO:0045349"}


id: GO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric late distal convoluted tubule over time, from its formation to the mature structure. The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late distal convoluted tubule development","termid":"GO:0072068"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric late distal convoluted tubule development","termid":"GO:0072225"}


id: PBO:0087103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17B has a paralog, RPS17A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0087103"}


id: GO:0103014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethyl-(2R)-methyl-(3S)-hydroxybutanoate + NADP = ethyl-2-methylacetoacetate + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-keto ester reductase activity (obsolete GO:0103014)","termid":"GO:0103014"}


id: GO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which controls the timing of the type of sexual cycle seen in female mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generation of ovulation cycle rhythm","synonyms":[{"name":"generation of estrus cycle rhythm","type":"exact"},{"name":"generation of menstrual cycle rhythm","type":"related"},{"name":"generation of oestrus cycle rhythm","type":"exact"}],"termid":"GO:0060112"}


id: PBO:0029123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus_upon_entry_into_stationary_phase","termid":"PBO:0029123"}


id: PBO:0070492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 27","termid":"PBO:0070492"}


id: PBO:0078652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 5-1","termid":"PBO:0078652"}


id: PBO:0078136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 15 (pseudogene)","termid":"PBO:0078136"}


id: PBO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed from ncRNA to protein 20151128","termid":"PBO:0025457"}


id: GO:0090312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["PMID:20027304","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein deacetylation","termid":"GO:0090311"},{"relation_name":"positively_regulates","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein deacetylation","synonyms":[{"name":"positive regulation of protein amino acid deacetylation","type":"exact"}],"termid":"GO:0090312"}


id: GO:1901754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D3.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D catabolic process","termid":"GO:0042369"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044248","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"vitamin D3 catabolic process","synonyms":[{"name":"calciol breakdown","type":"exact"},{"name":"calciol catabolic process","type":"exact"},{"name":"calciol catabolism","type":"exact"},{"name":"calciol degradation","type":"exact"},{"name":"cholecalciferol catabolic process","type":"exact"},{"name":"cholecalciferol catabolism","type":"exact"},{"name":"vitamin D3 breakdown","type":"exact"},{"name":"vitamin D3 catabolism","type":"exact"},{"name":"vitamin D3 degradation","type":"exact"}],"termid":"GO:1901754"}


id: PBO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase (predicted)","termid":"PBO:0000132"}


id: GO:1990828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hepatocyte (specialized epithelial cell of the liver) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["PMID:20102719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte dedifferentiation","termid":"GO:1990828"}


id: PBO:0087732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal peptidase complex (SPC); SPC cleaves the signal sequence from proteins targeted to the endoplasmic reticulum (ER); homolog of the SPC12 subunit of mammalian signal peptidase complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0087732"}


id: PBO:0073707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI/DACH domain containing 1","termid":"PBO:0073707"}


id: FYPO:0008009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering is abnormal. Telomere clustering gathers telomeres during or prior to tethering to the nuclear periphery during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:15615848","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal interphase mitotic telomere clustering during vegetative growth","synonyms":[{"name":"abnormal interphase telomere clustering","type":"broad"},{"name":"abnormal mitotic interphase telomere clustering","type":"exact"},{"name":"abnormal telomere clustering during vegetative growth","type":"exact"}],"termid":"FYPO:0008009"}


id: PBO:0031828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_absent","termid":"PBO:0031828"}


id: PBO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_population","termid":"PBO:0030184"}


id: PATO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001149 susceptibility value (obsolete PATO:0001149)","termid":"PATO:0001149"}


id: PATO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000779 absolute locomotor activity value (obsolete PATO:0000779)","termid":"PATO:0000779"}


id: PBO:0086594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced by heat and by calcium shortage; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W","termid":"PBO:0086594"}


id: GO:0021698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar cortex. This process pertains to the physical shaping of a rudimentary structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex structural organization","synonyms":[{"name":"cerebellar cortex structural organisation","type":"exact"}],"termid":"GO:0021698"}


id: SO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a fusion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"fusion","termid":"SO:0000806"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Fusion_gene"],"synonyms":[{"name":"fusion gene","type":"exact"}],"termid":"SO:0000287"}


id: GO:0005245
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic cation channel activity","termid":"GO:0022843"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5577213","Reactome:R-HSA-9701141","GO:0015270","Reactome:R-HSA-265645","Reactome:R-HSA-9701055","GO:0010173"],"synonyms":[{"name":"depolarization-activated calcium channel","type":"broad"},{"name":"depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"voltage gated calcium channel activity","type":"exact"},{"name":"voltage-dependent calcium channel activity","type":"exact"},{"name":"voltage-gated calcium ion channel activity","type":"exact"},{"name":"voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:0005245","terms_by_termid":{"GO:0008331":null}}


id: PBO:0064075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 109","termid":"PBO:0064075"}


id: PBO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-18 (pseudogene)","termid":"PBO:0051340"}


id: GO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic process involved in female pregnancy","termid":"GO:0060136"}


id: FYPO:0007443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and the protein is present in the cytosol instead.","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localization to ER membrane, with protein mislocalized to cytosol","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0007443"}


id: PBO:0081598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 4","termid":"PBO:0081598"}


id: PR:O94460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A queuine tRNA-ribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11962:SF0","PRO:DNx","OMA:SCHPO00369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.19c","secondary_identifiers":["UniProtKB:O94460"],"synonyms":[{"name":"Spom972h-QTRT1","type":"exact"},{"name":"guanine insertion enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-guanine transglycosylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94460"}


id: PBO:0087245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich protein of unknown function; predicted to be palmitoylated; overproduction suppresses growth inhibition caused by exposure to immunosuppressant leflunomide; MLF3 has a paralog, VHS2, that arose from the whole genome duplication","termid":"PBO:0087245"}


id: GO:0050228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxypteridine + H2O = 2,4-dihydroxypteridine + NH3.","definition_xrefs":["EC:3.5.4.11","MetaCyc:PTERIN-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pterin deaminase activity","secondary_identifiers":["RHEA:11904"],"synonyms":[{"name":"2-amino-4-hydroxypteridine aminohydrolase activity","type":"related"},{"name":"acrasinase activity","type":"related"}],"termid":"GO:0050228"}


id: PBO:0004543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc4","termid":"PBO:0004543"}


id: FYPO:0001664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"increased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"increased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001664"}


id: PR:O14037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.04c gene.","definition_xrefs":["UniProtKB:O14037","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0538 protein C2C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.04c","synonyms":[{"name":"Spom972h-SPAC2C4.04c","type":"exact"}],"termid":"PR:O14037"}


id: PBO:0054649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2054","termid":"PBO:0054649"}


id: PBO:0085625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; interacts with the Rho1p small GTP-binding protein and with the Rho-type GTPase Cdc42p; involved in maintenance of proper telomere length","termid":"PBO:0085625"}


id: GO:0010770
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91940,85743,90642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell morphogenesis contributing to cell differentiation. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"positively_regulates","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010770","terms_by_termid":{"GO:0051519":null}}


id: GO:0033328
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86322],"is_not":false,"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane.","definition_xrefs":["PMID:15133130","PMID:17020786","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"peroxisome membrane targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PMP targeting signal (mPTS) binding","type":"exact"},{"name":"PMP targeting signal binding","type":"exact"},{"name":"mPTS binding","type":"exact"},{"name":"peroxisomal membrane protein (PMP) targeting signal (mPTS) binding","type":"exact"}],"termid":"GO:0033328","terms_by_termid":{"GO:0033328":null}}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PATO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having not yet acquired a special structure of function.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated","termid":"PATO:0002100"}


id: GO:0035255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor binding","termid":"GO:0035254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ionotropic glutamate receptor binding","termid":"GO:0035255"}


id: GO:1900144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of BMP secretion.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of BMP secretion","termid":"GO:2001284"},{"relation_name":"positively_regulates","term_name":"BMP secretion","termid":"GO:0038055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of BMP secretion","synonyms":[{"name":"activation of BMP protein secretion","type":"narrow"},{"name":"activation of BMP secretion","type":"narrow"},{"name":"activation of bone morphogenetic protein secretion","type":"narrow"},{"name":"positive regulation of BMP protein secretion","type":"exact"},{"name":"positive regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"up regulation of BMP protein secretion","type":"exact"},{"name":"up regulation of BMP secretion","type":"exact"},{"name":"up regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"up-regulation of BMP protein secretion","type":"exact"},{"name":"up-regulation of BMP secretion","type":"exact"},{"name":"up-regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"upregulation of BMP protein secretion","type":"exact"},{"name":"upregulation of BMP secretion","type":"exact"},{"name":"upregulation of bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:1900144"}


id: GO:1903268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:12679340","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"positively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of ornithine catabolic process","synonyms":[{"name":"up regulation of ornithine catabolic process","type":"exact"},{"name":"activation of ornithine breakdown","type":"narrow"},{"name":"activation of ornithine catabolic process","type":"narrow"},{"name":"activation of ornithine catabolism","type":"narrow"},{"name":"activation of ornithine degradation","type":"narrow"},{"name":"positive regulation of ornithine breakdown","type":"exact"},{"name":"positive regulation of ornithine catabolism","type":"exact"},{"name":"positive regulation of ornithine degradation","type":"exact"},{"name":"up regulation of ornithine breakdown","type":"exact"},{"name":"up regulation of ornithine catabolism","type":"exact"},{"name":"up regulation of ornithine degradation","type":"exact"},{"name":"up-regulation of ornithine breakdown","type":"exact"},{"name":"up-regulation of ornithine catabolic process","type":"exact"},{"name":"up-regulation of ornithine catabolism","type":"exact"},{"name":"up-regulation of ornithine degradation","type":"exact"},{"name":"upregulation of ornithine breakdown","type":"exact"},{"name":"upregulation of ornithine catabolic process","type":"exact"},{"name":"upregulation of ornithine catabolism","type":"exact"},{"name":"upregulation of ornithine degradation","type":"exact"}],"termid":"GO:1903268"}


id: PBO:0017448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasitized_by","termid":"PBO:0017448"}


id: GO:0017177
data:
  {"annotated_genes":["SJAG_03535","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75931,77215],"is_not":false,"summary":null,"term":"GO:0017177"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins.","definition_xrefs":["PMID:10464333","PMID:8910335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"glucosidase II complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"alpha-glucosidase II complex","type":"related"}],"termid":"GO:0017177","terms_by_termid":{"GO:0017177":null}}


id: GO:2000511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granzyme A production","termid":"GO:2000511"}


id: PBO:0043762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX11","termid":"PBO:0043762"}


id: PBO:0034043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-allelopath_of","termid":"PBO:0034043"}


id: GO:1901322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloramphenicol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chloramphenicol","termid":"GO:1901322"}


id: PBO:0088728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ykt6","termid":"PBO:0088728"}


id: GO:0033079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation","termid":"GO:0033079"}


id: GO:0043354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte maturation","termid":"GO:0043249"},{"relation_name":"part_of","term_name":"enucleate erythrocyte development","termid":"GO:0048822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte maturation","synonyms":[{"name":"enucleate RBC maturation","type":"exact"},{"name":"enucleate red blood cell maturation","type":"exact"}],"termid":"GO:0043354"}


id: PBO:0031431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glycerol_dehydrogenase_activity","termid":"PBO:0031431"}


id: FYPO:0000829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cisplatin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cisplatin","synonyms":[{"name":"resistance to DPP","type":"broad"},{"name":"resistance to cis-DPP","type":"exact"},{"name":"resistance to cisplatin during mitotic cell cycle","type":"related"},{"name":"resistance to cisplatin during vegetative growth","type":"exact"},{"name":"resistant to cisplatin","type":"exact"}],"termid":"FYPO:0000829"}


id: GO:0031868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostaglandin F2-alpha receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F2-alpha receptor binding","synonyms":[{"name":"prostaglandin F2-alpha receptor ligand","type":"narrow"},{"name":"prostanoid FP receptor binding","type":"exact"}],"termid":"GO:0031868"}


id: PBO:0111332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L7-like protein involved in ribosome biogenesis","termid":"PBO:0111332"}


id: PBO:0089422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim44","termid":"PBO:0089422"}


id: PBO:0004170
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present in a complex with Rlc1 and Cdc15","termid":"PBO:0004170"}


id: PBO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7","termid":"PBO:0046845"}


id: PBO:0039883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 antisense RNA 1","termid":"PBO:0039883"}


id: PBO:0059349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15","termid":"PBO:0059349"}


id: GO:0097002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the mitochondrial inner membrane that is not invaginated to form cristae. The inner boundary membrane lies parallel to the outer membrane.","definition_xrefs":["PMID:19019989","GOC:mcc","PMID:16054341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial inner boundary membrane","secondary_identifiers":["NIF_Subcellular:sao18461326"],"synonyms":[{"name":"inner bounding mitochondrial membrane","type":"exact"}],"termid":"GO:0097002"}


id: GO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"is_a","term_name":"plant-type cell wall organization or biogenesis","termid":"GO:0071669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall organization","synonyms":[{"name":"cell wall organization and biogenesis","type":"narrow"},{"name":"cellulose and pectin-containing cell wall organization and biogenesis","type":"related"},{"name":"plant-type cell wall organisation","type":"exact"},{"name":"plant-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0009664"}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: MOD:00401
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Gygi isotope-coded affinity tag d0 reagent.","definition_xrefs":["PubMed:10504701","Unimod:8#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gygi ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Gygi ICAT(TM) d0","type":"related"},{"name":"ICAT-G","type":"related"}],"termid":"MOD:00401"}


id: GO:0055092
data:
  {"annotated_genes":["SJAG_03750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042632"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sterol within an organism or cell.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sterol homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055092","terms_by_termid":{"GO:0042632":null}}


id: PBO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Cia1","termid":"PBO:0090109"}


id: PBO:0041623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding tyrosine phosphorylation regulated","termid":"PBO:0041623"}


id: PBO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_location","termid":"PBO:0034277"}


id: FYPO:0005222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PomBase:mah","PMID:23028377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H3 localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H3 localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3 localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3 localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005222"}


id: PBO:0077005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 7","termid":"PBO:0077005"}


id: PBO:0031767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_antimycin_A","termid":"PBO:0031767"}


id: FYPO:0003359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myriocin. Cells stop growing (and may die) at a concentration of myriocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to myriocin during vegetative growth","synonyms":[{"name":"hypersensitive to myriocin during vegetative growth","type":"exact"},{"name":"sensitive to myriocin during mitotic cell cycle","type":"related"},{"name":"sensitivity to chemicals interfering with lipids during vegetative growth","type":"broad"}],"termid":"FYPO:0003359"}


id: PATO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis and towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotational curvature","termid":"PATO:0001787"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral and rotional curvature","termid":"PATO:0002049"}


id: PR:O94356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.07","synonyms":[{"name":"Spom972h-meu6","type":"exact"}],"termid":"PR:O94356"}


id: GO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a steroid hormone receptor into the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid hormone receptor import into nucleus (obsolete GO:0002146)","synonyms":[{"name":"steroid hormone receptor nuclear translocation","type":"narrow"}],"termid":"GO:0002146"}


id: FYPO:0000887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000874"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000887"}


id: GO:1990818
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93500],"is_not":false,"summary":null,"term":"GO:1990818"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:26083598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-arginine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990818","terms_by_termid":{"GO:1990818":null}}


id: PBO:0110422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript inducer of AURKA lysosomal degradation","termid":"PBO:0110422"}


id: GO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of protein homodimerization activity","termid":"GO:0043496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein homodimerization activity","termid":"GO:0090073"}


id: PBO:0004906
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease","termid":"PBO:0004906"}


id: FYPO:0002045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show decreased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to heat shock","synonyms":[{"name":"increased cell population growth during cellular response to heat shock","type":"exact"},{"name":"increased growth during cellular response to heat shock","type":"exact"},{"name":"resistant to heat shock","type":"exact"}],"termid":"FYPO:0002045"}


id: GO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinyl palmitate + H2O = 11-cis-retinol + H+ + palmitate.","definition_xrefs":["EC:3.1.1.63","RHEA:19697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"11-cis-retinyl-palmitate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03049","Reactome:R-HSA-2465941","MetaCyc:11-CIS-RETINYL-PALMITATE-HYDROLASE-RXN"],"synonyms":[{"name":"11-cis-retinol palmitate esterase activity","type":"related"},{"name":"11-cis-retinyl-palmitate acylhydrolase activity","type":"related"},{"name":"RPH","type":"related"}],"termid":"GO:0047520"}


id: PBO:0110830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Prt1","termid":"PBO:0110830"}


id: PBO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 3","termid":"PBO:0070537"}


id: PBO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent orthologs, S. pombe variant","termid":"PBO:0000292"}


id: PBO:0085797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; conserved among S. cerevisiae strains, not conserved in closely related Saccharomyces species; protein detected via large-scale protein-protein interaction studies and enrichment-based proteogenomics; YJL199C is not an essential gene","termid":"PBO:0085797"}


id: FYPO:0000699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-7-methylguanine glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"DNA-7-methylguanine glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0000699"}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["UniProtKB:Q10264","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: PBO:0005718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase (predicted)","termid":"PBO:0005718"}


id: PBO:0073511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 4B","termid":"PBO:0073511"}


id: PBO:0062966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 9","termid":"PBO:0062966"}


id: PBO:0035771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035771"}


id: PBO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 14","termid":"PBO:0060113"}


id: PR:O14228
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoribosylformylglycinamidine synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10099:SF0","PRO:DNx","OMA:SCHPO00539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.10c","secondary_identifiers":["UniProtKB:O14228"],"synonyms":[{"name":"FGAM synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAMS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAR amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FGAR-AT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PFAS","type":"exact"},{"name":"formylglycinamide ribonucleotide amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"formylglycinamide ribotide amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14228"}


id: GO:0042597
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970","SJAG_02853","SJAG_02093"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99256,99730],"is_not":false,"summary":null,"term":"GO:0042597"},{"annotations":[109932,109931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).","definition_xrefs":["GOC:md","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_02093":null,"SJAG_02853":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005620"],"synonyms":[{"name":"periplasm","type":"exact"}],"termid":"GO:0042597","terms_by_termid":{"GO:0030287":null,"GO:0042597":null}}


id: GO:0060047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart contraction","synonyms":[{"name":"cardiac contraction","type":"related"},{"name":"heart beating","type":"exact"},{"name":"hemolymph circulation","type":"related"}],"termid":"GO:0060047"}


id: MOD:01908
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to the 4-sulfophenyl isothiocyanate adduct, alpha-amino-[(4-sulfophenyl)carbamothioyl] residue.","definition_xrefs":["PubMed:16526082","PubMed:14689565","PubMed:14745769","Unimod:261#N-term","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-sulfophenyl isothiocyanate alpha-amino derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate","type":"related"},{"name":"SPITC","type":"related"},{"name":"alpha-amino-[(4-sulfophenyl)carbamothioyl] residue","type":"exact"}],"termid":"MOD:01908"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: PBO:0041988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 32","termid":"PBO:0041988"}


id: GO:2000423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"negative regulation of eosinophil migration","termid":"GO:2000417"},{"relation_name":"is_a","term_name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"},{"relation_name":"negatively_regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil chemotaxis","termid":"GO:2000423"}


id: GO:0060427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung connective tissue development","synonyms":[{"name":"pulmonary connective tissue development","type":"exact"}],"termid":"GO:0060427"}


id: PBO:0078710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-5","termid":"PBO:0078710"}


id: GO:0007196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor signaling pathway","termid":"GO:0007216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by G-protein-coupled glutamate receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by metabotropic glutamate receptor signaling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by metabotropic glutamate receptor signalling pathway","type":"exact"},{"name":"metabotropic glutamate receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"metabotropic glutamate receptor, adenylyl cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0007196"}


id: PBO:0057054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 139","termid":"PBO:0057054"}


id: PBO:0026661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_inositol_starvation","termid":"PBO:0026661"}


id: PBO:0038341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realized_in_response_to","termid":"PBO:0038341"}


id: PBO:0044392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 9","termid":"PBO:0044392"}


id: GO:0033571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactoferrin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lactoferrin transport","termid":"GO:0033571"}


id: GO:0022410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process involved in the cycle from wakefulness through an orderly succession of sleep states and stages that occurs on an approximately 24 hour rhythm.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle","termid":"GO:0042745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle process","termid":"GO:0022410"}


id: GO:0005946
data:
  {"annotated_genes":["SJAG_00182","SJAG_04859","SJAG_01427","SJAG_01646","SJAG_00129","SJAG_01862","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73482,73947,75179,77766,78023,78612,108025],"is_not":false,"summary":null,"term":"GO:0005946"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses alpha,alpha-trehalose-phosphate synthase (UDP-forming) and trehalose-phosphatase activities, and thus catalyzes two reactions in trehalose biosynthesis. In the complex identified in Saccharomyces, Tps1p has alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, Tps2p has trehalose 6-phosphate phosphatase activity; Tps3p is a regulatory subunit, and an additional subunit, Tsl1p, may be present.","definition_xrefs":["PMID:9837904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose-glucosephosphate glucosyltransferase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase/phosphatase","type":"exact"}],"termid":"GO:0005946","terms_by_termid":{"GO:0005946":null}}


id: FYPO:0006994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is increased at the left outer repeat region (otr1L) of the centromere.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at centromere outer repeat","termid":"FYPO:0006299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at centromere otr1L","synonyms":[{"name":"increased centromere outer repeat region chromatin silencing at otr1L","type":"exact"},{"name":"increased chromatin silencing at centromere otr1L during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at centromere otr1L during vegetative growth","type":"exact"},{"name":"increased chromatin silencing at centromere otr1L region","type":"exact"},{"name":"increased chromatin silencing at centromeric otr1L","type":"exact"},{"name":"increased chromatin silencing at pericentric region otr1L","type":"related"},{"name":"increased chromatin silencing at pericentromeric region otr1L","type":"related"},{"name":"increased heterochromatic silencing at centromere otr1L","type":"exact"},{"name":"increased heterochromatin silencing at centromere otr1L","type":"exact"}],"termid":"FYPO:0006994"}


id: GO:0141039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of a phosphatidylinositol 3-kinase (PI3K).","definition_xrefs":["PMID:31686003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase regulator activity","termid":"GO:0035014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase inhibitor activity","termid":"GO:0141039"}


id: GO:1901381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transport","termid":"GO:0043268"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transport","synonyms":[{"name":"activation of potassium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of potassium ion membrane transport","type":"exact"},{"name":"up regulation of potassium ion transmembrane transport","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"upregulation of potassium ion transmembrane transport","type":"exact"}],"termid":"GO:1901381"}


id: SO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 5 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"five prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001975"}


id: PBO:0075527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E7, pseudogene","termid":"PBO:0075527"}


id: PBO:0055949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC57 pseudogene 1","termid":"PBO:0055949"}


id: PBO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 3 subunit","termid":"PBO:0043083"}


id: FYPO:0002008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased aconitate hydratase activity","synonyms":[{"name":"decreased aconitase activity","type":"exact"},{"name":"reduced aconitate hydratase activity","type":"exact"}],"termid":"FYPO:0002008"}


id: PR:P22774-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-2.","definition_xrefs":["UniProtKB:P22774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Short (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-2"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Short","type":"exact"}],"termid":"PR:P22774-2"}


id: PBO:0081770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 702, pseudogene","termid":"PBO:0081770"}


id: PBO:0091537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPM2","termid":"PBO:0091537"}


id: SO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylpseudouridine","secondary_identifiers":["RNAMOD:056"],"synonyms":[{"name":"2'-O-methylpseudouridine","type":"exact"},{"name":"Ym","type":"exact"},{"name":"two prime O methylpseudouridine","type":"exact"}],"termid":"SO:0001348"}


id: GO:0000310
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89811],"is_not":false,"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-alpha-D-ribose 1-diphosphate + xanthine = (9-D-ribosylxanthine)-5'-phosphate + diphosphate.","definition_xrefs":["GOC:clt","EC:2.4.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"xanthine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:10800","GO:0009043","MetaCyc:XANPRIBOSYLTRAN-RXN"],"synonyms":[{"name":"5-phospho-alpha-D-ribose-1-diphosphate:xanthine phospho-D-ribosyltransferase activity","type":"related"},{"name":"XMP pyrophosphorylase activity","type":"related"},{"name":"XMP:diphosphate 5-phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"Xan phosphoribosyltransferase activity","type":"related"},{"name":"xanthine-guanine phosphoribosyltransferase activity","type":"exact"},{"name":"xanthosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"xanthylate pyrophosphorylase activity","type":"related"},{"name":"xanthylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0000310","terms_by_termid":{"GO:0000310":null}}


id: PBO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 128, pseudogene","termid":"PBO:0052828"}


id: PBO:0091823
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana cdc2aAt","termid":"PBO:0091823"}


id: PBO:0066942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 244","termid":"PBO:0066942"}


id: GO:0140077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of lipoprotein transport.","definition_xrefs":["GOC:RPH","GOC:BHF","GOC:BHF_miRNA","PMID:26501192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"positively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipoprotein transport","termid":"GO:0140077"}


id: GO:0036291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of one or more of its own amino acid residues.","definition_xrefs":["GOC:jsg","PMID:9201908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein cis-autophosphorylation","synonyms":[{"name":"cis-autophosphorylation","type":"exact"}],"termid":"GO:0036291"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["PMID:11387982","GOC:TermGenie","GOC:yaf","MetaCyc:PWY-5943","UniPathway:UPA00802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: PBO:0043128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIBAR1 divergent transcript","termid":"PBO:0043128"}


id: FYPO:0007982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in a single bundle and are not normally crosslinked, resulting in an aster-like organisation. See PMID:15068790.","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single microtubule bundle during mitotic interphase","termid":"FYPO:0002400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"single microtubule bundle with aster-like microtubules","termid":"FYPO:0007982"}


id: PBO:0080154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCAN antisense RNA 1","termid":"PBO:0080154"}


id: PBO:0088651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn8","termid":"PBO:0088651"}


id: PATO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000138 absolute orientation (obsolete PATO:0000138)","termid":"PATO:0000138"}


id: PBO:0074961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-3","termid":"PBO:0074961"}


id: GO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin B receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neuromedin B receptor binding","synonyms":[{"name":"neuromedin B receptor ligand","type":"narrow"}],"termid":"GO:0031710"}


id: GO:1904586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a putrescine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:20805360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to putrescine","termid":"GO:1904585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to putrescine","synonyms":[{"name":"cellular response to 1,4-Butanediamine","type":"exact"},{"name":"cellular response to 1,4-Diaminobutane","type":"exact"},{"name":"cellular response to tetramethylenediamine","type":"exact"}],"termid":"GO:1904586"}


id: PBO:0078041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 31","termid":"PBO:0078041"}


id: GO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"xanthophyll biosynthetic process","synonyms":[{"name":"xanthophyll anabolism","type":"exact"},{"name":"xanthophyll biosynthesis","type":"exact"},{"name":"xanthophyll formation","type":"exact"},{"name":"xanthophyll synthesis","type":"exact"}],"termid":"GO:0016123"}


id: FYPO:0007876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the plasma membrane is smoother than normal at the shmoo tip. Normally, the plasma membrane of one of a pair of mating cells is slack shmoo tip, forming waves instead of a smooth arc.","definition_xrefs":["PomBase:mah","PMID:34382996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased plasma membrane waviness at shmoo tip","synonyms":[{"name":"abnormally smooth plasma membrane at shmoo tip","type":"related"},{"name":"decreased plasma membrane waviness at mating projection tip","type":"exact"},{"name":"decreased plasma membrane waviness at shmoo projection","type":"exact"},{"name":"reduced plasma membrane waviness at shmoo tip","type":"exact"}],"termid":"FYPO:0007876"}


id: PBO:0068017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 322","termid":"PBO:0068017"}


id: PBO:0058446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5011","termid":"PBO:0058446"}


id: PBO:0074005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 6","termid":"PBO:0074005"}


id: PBO:0004292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2 (predicted)","termid":"PBO:0004292"}


id: PBO:0007962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosyl phosphatase activator Ypa2","termid":"PBO:0007962"}


id: PBO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8A","termid":"PBO:0052482"}


id: GO:0042360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin E metabolic process","synonyms":[{"name":"alpha-tocopherol metabolic process","type":"narrow"},{"name":"alpha-tocopherol metabolism","type":"narrow"},{"name":"tocopherol metabolic process","type":"exact"},{"name":"tocopherol metabolism","type":"exact"},{"name":"vitamin E metabolism","type":"exact"}],"termid":"GO:0042360"}


id: MOD:00975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3'-chlorotyrosine","termid":"MOD:00975"}


id: PBO:0059164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal pentraxin 1 (pseudogene)","termid":"PBO:0059164"}


id: GO:0034820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3E,1Z)-4,5-9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate + H2O = (2E,4E)-2-hydroxyhexa-2,4-dienoate + 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oate + H+.","definition_xrefs":["UM-BBD_reactionID:r1152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"4,9-DSHA hydrolase activity","termid":"GO:0034820"}


id: PBO:0017690
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic neuropathy with encephalopathy and cerebellar atrophy","termid":"PBO:0017690"}


id: PBO:0078246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 24-1","termid":"PBO:0078246"}


id: PBO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, human ZNF593 ortholog","termid":"PBO:0002745"}


id: GO:1903186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:19467235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitellogenesis","synonyms":[{"name":"regulation of yolk production","type":"exact"}],"termid":"GO:1903186"}


