# terms

id: PR:O74965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03697","PANTHER:PTHR13227:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.04","secondary_identifiers":["UniProtKB:O74965"],"synonyms":[{"name":"Spom972h-EIF2A","type":"exact"},{"name":"eIF-2A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74965"}


id: PBO:0056361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 4","termid":"PBO:0056361"}


id: GO:1905521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage migration","termid":"GO:1905521"}


id: PBO:0056754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 6, methylcytidine","termid":"PBO:0056754"}


id: GO:0019607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular biogenic amine catabolic process","termid":"GO:0042402"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process","termid":"GO:0042443"},{"relation_name":"is_a","term_name":"primary amino compound catabolic process","termid":"GO:1901161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine catabolic process","secondary_identifiers":["MetaCyc:2PHENDEG-PWY"],"synonyms":[{"name":"phenylethylamine breakdown","type":"exact"},{"name":"phenylethylamine catabolism","type":"exact"},{"name":"phenylethylamine degradation","type":"exact"}],"termid":"GO:0019607"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: PBO:0039863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP26 antisense RNA 1","termid":"PBO:0039863"}


id: GO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alpha-2,8-linked polymer of sialic acid = CoA + polysialic acid acetylated at O-7 or O-9.","definition_xrefs":["MetaCyc:POLYSIALIC-ACID-O-ACETYLTRANSFERASE-RXN","EC:2.3.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"polysialic-acid O-acetyltransferase activity","secondary_identifiers":["RHEA:11604"],"synonyms":[{"name":"acetyl-CoA:polysialic-acid O-acetyltransferase activity","type":"exact"}],"termid":"GO:0050208"}


id: PBO:0081707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 627","termid":"PBO:0081707"}


id: PBO:0011993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase Rad54/Rhp54","termid":"PBO:0011993"}


id: GO:0050793
data:
  {"annotated_genes":["SJAG_04853","SJAG_00333","SJAG_02379","SJAG_00855","SJAG_04322","SJAG_03631","SJAG_02838","SJAG_04232","SJAG_02392","SJAG_00514","SJAG_00845","SJAG_03793","SJAG_00596","SJAG_03637","SJAG_01212","SJAG_01794","SJAG_01053","SJAG_00661","SJAG_03705","SJAG_00028","SJAG_01458","SJAG_04509","SJAG_04203","SJAG_02566","SJAG_03486","SJAG_03453","SJAG_01799","SJAG_02415","SJAG_00993","SJAG_04350","SJAG_02536","SJAG_04140","SJAG_00244","SJAG_01456","SJAG_04522","SJAG_04462","SJAG_02022","SJAG_04666","SJAG_00216","SJAG_00304","SJAG_04461","SJAG_00236","SJAG_03581","SJAG_04724","SJAG_02169","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91940,85743,90642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[114616,83867,103241,95929,99789,107249,113179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[107703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[86628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[114527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048671"},{"annotations":[99770,113000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[102830,98299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[98545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[97999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045773"},{"annotations":[113287,104024],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[89789,101703,96377,100011],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[89517,107880,83706,86755,85747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[105320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[110251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031643"},{"annotations":[88130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"},{"annotations":[100014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050770"},{"annotations":[111696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[109970,115294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022604"},{"annotations":[115992,101689,115991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[99794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060998"},{"annotations":[91758,115505,87044,90648,100868,109649],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[83711,88388,99121],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"},{"annotations":[87932,113872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000036"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00304":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_00993":null,"SJAG_01053":null,"SJAG_01212":null,"SJAG_01456":null,"SJAG_01458":null,"SJAG_01794":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02415":null,"SJAG_02536":null,"SJAG_02566":null,"SJAG_02838":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03793":null,"SJAG_04140":null,"SJAG_04203":null,"SJAG_04232":null,"SJAG_04322":null,"SJAG_04350":null,"SJAG_04461":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"termid":"GO:0050793","terms_by_termid":{"GO:0008360":null,"GO:0010637":null,"GO:0022604":null,"GO:0031643":null,"GO:0034307":null,"GO:0045773":null,"GO:0048671":null,"GO:0050770":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0060998":null,"GO:0075296":null,"GO:0075297":null,"GO:0090141":null,"GO:0090258":null,"GO:1902917":null,"GO:1903024":null,"GO:2000036":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: GO:0097314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of the apoptosome, a multisubunit protein complex involved in the signaling phase of the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"apoptosome assembly","synonyms":[{"name":"apoptosome formation","type":"exact"}],"termid":"GO:0097314"}


id: GO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle contraction","synonyms":[{"name":"activation of uterine smooth muscle contraction","type":"narrow"},{"name":"positive regulation of myometrial contraction","type":"exact"},{"name":"positive regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"positive regulation of myometrium contraction","type":"exact"},{"name":"stimulation of uterine smooth muscle contraction","type":"narrow"},{"name":"up regulation of uterine smooth muscle contraction","type":"exact"},{"name":"up-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"upregulation of uterine smooth muscle contraction","type":"exact"}],"termid":"GO:0070474"}


id: PBO:0030300
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_actin_cortical_patch_localization_to_either_end","termid":"PBO:0030300"}


id: GO:0062126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid primary amide metabolic process","synonyms":[{"name":"primary fatty amide metabolic process","type":"exact"}],"termid":"GO:0062126"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: PBO:0081061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 24","termid":"PBO:0081061"}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: PBO:0028536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028536"}


id: GO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"},{"relation_name":"negatively_regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte antigen processing and presentation","synonyms":[{"name":"down regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"down-regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"downregulation of monocyte antigen processing and presentation","type":"exact"},{"name":"inhibition of monocyte antigen processing and presentation","type":"narrow"}],"termid":"GO:0002614"}


id: GO:0009418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long, slender, mid section of a pilus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus shaft","synonyms":[{"name":"fimbrial shaft","type":"exact"}],"termid":"GO:0009418"}


id: PBO:0050295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A0","termid":"PBO:0050295"}


id: GO:0005955
data:
  {"annotated_genes":["SJAG_03793","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72616,78271],"is_not":false,"summary":null,"term":"GO:0005955"}]},"cv_name":"cellular_component","definition":"A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin.","definition_xrefs":["PMID:26794871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03631":null,"SJAG_03793":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"calcineurin complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase complex","type":"narrow"},{"name":"protein phosphatase type 2B complex","type":"exact"}],"termid":"GO:0005955","terms_by_termid":{"GO:0005955":null}}


id: PBO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 188","termid":"PBO:0061689"}


id: PBO:0071966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A5","termid":"PBO:0071966"}


id: PBO:0085602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cellular response to oxidative stress; required for oxidation of specific cysteine residues of transcription factor Yap1p, resulting in nuclear localization of Yap1p in response to stress; YBP1 has a paralog, YBP2, that arose from the whole genome duplication","termid":"PBO:0085602"}


id: PR:O74389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug176 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 176 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.14","synonyms":[{"name":"Spom972h-mug176","type":"exact"}],"termid":"PR:O74389"}


id: PBO:0051291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-12","termid":"PBO:0051291"}


id: PBO:0086874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative subunit of the 90S preribosome processome complex; overexpression rescues supressor mutant of mcm10; null mutant is viable; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0086874"}


id: GO:0047694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: barbiturate + H2O = malonate + urea.","definition_xrefs":["MetaCyc:BARBITURASE-RXN","EC:3.5.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"barbiturase activity","secondary_identifiers":["RHEA:18653"],"synonyms":[{"name":"barbiturate amidohydrolase (3-oxo-3-ureidopropanoate-forming)","type":"related"}],"termid":"GO:0047694"}


id: PBO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase (predicted)","termid":"PBO:0002300"}


id: PBO:0091187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 6","termid":"PBO:0091187"}


id: GO:1905280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of retrograde transport, endosome to Golgi","termid":"GO:1905279"},{"relation_name":"negatively_regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"down regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"down regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"down-regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"down-regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"downregulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"downregulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"inhibition of retrograde (endosome to Golgi) transport","type":"narrow"},{"name":"inhibition of retrograde transport, endosome to Golgi","type":"narrow"},{"name":"negative regulation of retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:1905280"}


id: GO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric duct over time, from its formation to the mature structure. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the pronephric kidney.","definition_xrefs":["ZFA:0000150","PMID:15647339","GOC:mtg_kidney_jan10","XAO:0000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct development","termid":"GO:0039022"}


id: PBO:0073225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 1","termid":"PBO:0073225"}


id: GO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4) linkages in (1->4)-beta-D-glucans, to remove successive glucose units.","definition_xrefs":["GOC:mlg","EC:3.2.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucan 1,4-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.74-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucohydrolase activity","type":"broad"},{"name":"beta-1,4-beta-glucanase activity","type":"broad"},{"name":"beta-1,4-glucanase activity","type":"broad"},{"name":"exo-1,4-beta-D-glucosidase activity","type":"related"},{"name":"exo-1,4-beta-glucanase activity","type":"exact"},{"name":"exo-1,4-beta-glucosidase activity","type":"exact"},{"name":"exo-beta-1,4-glucanase activity","type":"exact"},{"name":"exo-beta-1,4-glucosidase activity","type":"exact"},{"name":"exocellulase activity","type":"exact"}],"termid":"GO:0031217"}


id: GO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:hjd","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenic-containing substance","synonyms":[{"name":"arsenate sensitivity/resistance","type":"related"},{"name":"response to arsenic","type":"exact"}],"termid":"GO:0046685"}


id: GO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle motor activity (obsolete GO:0003776)","synonyms":[{"name":"muscle motor activity","type":"exact"}],"termid":"GO:0003776"}


id: PBO:0046968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member E","termid":"PBO:0046968"}


id: PBO:0050616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2","termid":"PBO:0050616"}


id: GO:0098902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization during an action potential. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential.","definition_xrefs":["GOC:dos","ISBN:978-0-07-139011-8","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"regulates","term_name":"membrane depolarization during action potential","termid":"GO:0086010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"}


id: PBO:0076279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 2 like","termid":"PBO:0076279"}


id: PBO:0084271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; required for asymmetric localization of Kar9p during mitosis; GFP-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084271"}


id: PBO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type B","termid":"PBO:0044303"}


id: PBO:0049655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 9","termid":"PBO:0049655"}


id: GO:0071255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle organization process that takes place as part of the Cvt pathway, and results in the formation of a double membrane-bounded cytosolic structure that sequesters precursor aminopeptidase I (prAPI).","definition_xrefs":["PMID:11085977","PMID:10966461","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"cytoplasm to vacuole targeting by the Cvt pathway","termid":"GO:0032258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0006605","GO:0006810"],"is_obsolete":false,"name":"Cvt vesicle assembly","synonyms":[{"name":"Cvt vesicle biosynthesis","type":"related"},{"name":"Cvt vesicle formation","type":"exact"},{"name":"cytoplasm to vacuole targeting vesicle assembly","type":"exact"},{"name":"cytoplasm-to-vacuole targetin vesicle assembly","type":"exact"}],"termid":"GO:0071255"}


id: GO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cardiac chamber is generated and organized. A cardiac chamber is an enclosed cavity within the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber morphogenesis","synonyms":[{"name":"heart chamber morphogenesis","type":"exact"}],"termid":"GO:0003206"}


id: GO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of a L-amino acid into its enantiomer, the corresponding D-amino acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"},{"relation_name":"is_a","term_name":"chiral amino acid racemization","termid":"GO:0018366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}


id: PBO:0041228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 50","termid":"PBO:0041228"}


id: PBO:0012304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 4 (predicted)","termid":"PBO:0012304"}


id: PBO:0029610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_vegetative_cell","termid":"PBO:0029610"}


id: PBO:0046306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamelin","termid":"PBO:0046306"}


id: PBO:0071731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 29","termid":"PBO:0071731"}


id: GO:1905347
data:
  {"annotated_genes":["SJAG_01044","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73847,77897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endodeoxyribonuclease activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","GOC:bhm","PMID:18413719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endodeoxyribonuclease complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"}],"termid":"GO:1905347","terms_by_termid":{"GO:0048476":null}}


id: SO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of loci that can be grouped in a linear order representing the different degrees of linkage among the genes concerned.","definition_xrefs":["ISBN:038752046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linkage_group","secondary_identifiers":["http://en.wikipedia.org/wiki/Linkage_group"],"synonyms":[{"name":"linkage group","type":"exact"}],"termid":"SO:0000018"}


id: PBO:0034612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_periphery","termid":"PBO:0034612"}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PBO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Gaf1","termid":"PBO:0005588"}


id: PBO:0072569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal pigment epithelium-derived rhodopsin homolog","termid":"PBO:0072569"}


id: GO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes ERAD-luminal misfolded substrates and brings them to the ubiquitination/extraction machinery. In yeast, this complex consists of Yos9p, Kar2p and Hrd3p proteins.","definition_xrefs":["PMID:16873065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"luminal surveillance complex","termid":"GO:0034099"}


id: PBO:0052891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-2","termid":"PBO:0052891"}


id: PR:Q9UST8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03401","PANTHER:PTHR10642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.06c","secondary_identifiers":["UniProtKB:Q9UST8"],"synonyms":[{"name":"RNase H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH1","type":"exact"}],"termid":"PR:Q9UST8"}


id: PBO:0004335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biosynthesis/ cell cycle regulator (predicted)","termid":"PBO:0004335"}


id: PBO:0090920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase Guk1","termid":"PBO:0090920"}


id: FYPO:0006253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and transfer RNA (tRNA) is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-RNA interaction","termid":"FYPO:0002357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0002131","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA binding","synonyms":[{"name":"normal protein-tRNA interaction","type":"exact"},{"name":"normal protein-transfer RNA interaction","type":"exact"},{"name":"normal transfer RNA binding","type":"exact"}],"termid":"FYPO:0006253"}


id: PR:O14173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi2 gene.","definition_xrefs":["UniProtKB:O14173","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4D7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.07c","synonyms":[{"name":"Spom972h-csi2","type":"exact"}],"termid":"PR:O14173"}


id: PBO:0084202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-CoA reductase; converts HMG-CoA to mevalonate, a rate-limiting step in sterol biosynthesis; one of two isozymes; overproduction induces assembly of peripheral ER membrane arrays and short nuclear-associated membrane stacks; forms foci at nuclear periphery upon DNA replication stress; HMG2 has a paralog, HMG1, that arose from the whole genome duplication; human homolog HMGCR can complement yeast hmg2 mutant","termid":"PBO:0084202"}


id: GO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of cytochromes and other heme proteins to heme via heme-bis-L-cysteine.","definition_xrefs":["RESID:AA0134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome c-heme linkage","termid":"GO:0018063"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"cytochrome c-heme linkage via heme-bis-L-cysteine","synonyms":[{"name":"cytochrome c-haem linkage via haem-bis-L-cysteine","type":"exact"}],"termid":"GO:0018379"}


id: PBO:0085567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein essential for meiotic DNA replication and sporulation; cytoplasmic protein; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation; also interacts with Orc2p, which is a component of the origin recognition complex","termid":"PBO:0085567"}


id: GO:1900227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NLRP3 inflammasome complex assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of NLRP3 inflammasome complex assembly","termid":"GO:1900225"},{"relation_name":"part_of","term_name":"positive regulation of inflammasome-mediated signaling pathway","termid":"GO:0141087"},{"relation_name":"positively_regulates","term_name":"NLRP3 inflammasome complex assembly","termid":"GO:0044546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of NLRP3 inflammasome complex assembly","synonyms":[{"name":"activation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"activation of NLRP3 inflammasome activation","type":"related"},{"name":"activation of NLRP3 inflammasome complex assembly","type":"narrow"},{"name":"positive regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"positive regulation of NLRP3 inflammasome activation","type":"related"},{"name":"up regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"up regulation of NLRP3 inflammasome activation","type":"related"},{"name":"up regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"up-regulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"up-regulation of NLRP3 inflammasome activation","type":"related"},{"name":"up-regulation of NLRP3 inflammasome complex assembly","type":"exact"},{"name":"upregulation of NALP3 inflammasome complex assembly","type":"exact"},{"name":"upregulation of NLRP3 inflammasome activation","type":"related"},{"name":"upregulation of NLRP3 inflammasome complex assembly","type":"exact"}],"termid":"GO:1900227"}


id: GO:0030787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-4-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.129","RHEA:23248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol 4-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.129-RXN","KEGG_REACTION:R01190"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 4-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 4-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 4-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030787"}


id: GO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to a linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the otolith and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","PMID:11784757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"linear vestibuloocular reflex","termid":"GO:0060007"}


id: FYPO:0002024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"inviable elongated aseptate cell","termid":"FYPO:0002066"},{"relation_name":"is_a","term_name":"inviable multinucleate aseptate vegetative cell","termid":"FYPO:0004106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0000032","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate aseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002024"}


id: PBO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochindrial peptide release factor (predicted)","termid":"PBO:0018047"}


id: GO:0010215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellulose microfibril, any of the cellulose structures laid down in orthogonal layers in a plant cell wall.","definition_xrefs":["GOC:mah","PMID:12468730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"part_of","term_name":"plant-type cell wall assembly","termid":"GO:0071668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellulose microfibril organization","synonyms":[{"name":"cellulose microfibril organisation","type":"exact"}],"termid":"GO:0010215"}


id: PBO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase like transcription factor","termid":"PBO:0050065"}


id: PBO:0041136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 19","termid":"PBO:0041136"}


id: PBO:0031363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_brefeldin_A","termid":"PBO:0031363"}


id: PBO:0017724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spa2 interacting protein Pos1","termid":"PBO:0017724"}


id: FYPO:0003788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nuclear envelope has one or more extensions that protrude into the cytoplasm during mitosis.","definition_xrefs":["PomBase:mah","PMID:25103238","PMID:17486116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002403","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"nuclear envelope protrusion present during mitosis","synonyms":[{"name":"nuclear envelope deformation during mitosis","type":"related"},{"name":"nuclear envelope protrusion present during mitotic M phase","type":"related"},{"name":"nuclear envelope protrusion present during mitotic cell cycle","type":"related"},{"name":"nuclear envelope protrusion present during mitotic nuclear division","type":"exact"},{"name":"nuclear envelope protrusion present during vegetative growth","type":"exact"},{"name":"protruding nuclear envelope during mitosis","type":"exact"}],"termid":"FYPO:0003788"}


id: GO:0006237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates deoxycytidine, 2-deoxyribosylcytosine, from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside salvage","termid":"GO:0043099"},{"relation_name":"is_a","term_name":"deoxycytidine biosynthetic process","termid":"GO:0046093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxycytidine salvage","termid":"GO:0006237"}


id: PBO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol metabolism protein Opi10 (predicted)","termid":"PBO:0003976"}


id: PBO:0082250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the nascent polypeptide-associated complex (NAC); involved in protein sorting and translocation; associated with cytoplasmic ribosomes","termid":"PBO:0082250"}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: PBO:0056165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2L1 binding protein","termid":"PBO:0056165"}


id: PBO:0004235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase complex subunit H (predicted)","termid":"PBO:0004235"}


id: GO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085","GO:0065003","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Golgi membrane coat protein complex assembly","synonyms":[{"name":"Golgi apparatus membrane coat protein complex assembly","type":"exact"},{"name":"Golgi membrane bud coat oligomerisation","type":"narrow"},{"name":"dictyosome membrane binding by cytosolic coat proteins","type":"narrow"},{"name":"dictyosome membrane bud coat oligomerisation","type":"narrow"}],"termid":"GO:0048197"}


id: PBO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OIP5 antisense RNA 1","termid":"PBO:0061844"}


id: PBO:0027031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope","termid":"PBO:0027031"}


id: GO:1905782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["PMID:17401362","GO_REF:0000058","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid translocation","termid":"GO:0061092"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"activation of externalization of phosphatidylserine","type":"narrow"},{"name":"activation of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"positive regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"up-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"upregulation of externalization of phosphatidylserine","type":"exact"},{"name":"upregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"}],"termid":"GO:1905782"}


id: PBO:0049604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 7","termid":"PBO:0049604"}


id: GO:0003146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the heart cone is displaced to the left with respect to the vector of the anterior-posterior axis.","definition_xrefs":["GOC:mtg_heart","PMID:9334285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart jogging","synonyms":[{"name":"cardiac jogging","type":"exact"}],"termid":"GO:0003146"}


id: PBO:0090770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF34 family protein","termid":"PBO:0090770"}


id: GO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitroalkane + H2O + O2 = an aldehyde or ketone + nitrite + H2O2.","definition_xrefs":["EC:1.7.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitroalkane oxidase activity","secondary_identifiers":["KEGG_REACTION:R00799","MetaCyc:RXN-11045"],"synonyms":[{"name":"NAO activity","type":"related"},{"name":"nitroalkane reductase activity","type":"related"},{"name":"nitroalkane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0052664"}


id: FYPO:0001633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular phenylalanine level","termid":"FYPO:0001642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar phenylalanine level","synonyms":[{"name":"normal level of phenylalanine in vacuole","type":"exact"},{"name":"normal vacuolar L-phenylalanine level","type":"exact"},{"name":"normal vacuolar phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar phenylalanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001633"}


id: SO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region in which there is an exchange of genetic material as a result of the repair of meiosis-specific double strand breaks that occur during meiotic prophase.","definition_xrefs":["SO:ke","NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:meiotic","type":"exact"},{"name":"INSDC_qualifier:meiotic_recombination","type":"exact"},{"name":"meiotic recombination region","type":"exact"}],"termid":"SO:0002155"}


id: PBO:0082977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin reductase; key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress; protein abundance increases in response to DNA replication stress; TRR1 has a paralog, TRR2, that arose from the whole genome duplication","termid":"PBO:0082977"}


id: GO:2000591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"},{"relation_name":"positively_regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"positive regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000591"}


id: PBO:0087166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C34; interacts with TFIIIB70 and is a key determinant in pol III recruitment by the preinitiation complex","termid":"PBO:0087166"}


id: FYPO:0006800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is decreased during interphase of the mitotic cell cycle. Centromere-kinetochore complexes normally cluster near the old spindle pole body during mitotic interphase.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased centromere clustering at nuclear periphery during mitotic interphase","synonyms":[{"name":"centromere declustering during mitotic interphase","type":"exact"},{"name":"decreased centromere clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased centromere clustering at nuclear periphery during interphase during vegetative growth","type":"exact"},{"name":"decreased centromere clustering at nuclear periphery during interphase of mitotic cell cycle","type":"related"},{"name":"decreased centromere clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased centromere-SPB clustering during mitotic interphase","type":"related"},{"name":"decreased inter-centromere connection during mitotic interphase","type":"exact"},{"name":"decreased kinetochore clustering at SPB during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at old mitotic spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore clustering at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased kinetochore localization at spindle pole body during mitotic interphase","type":"related"},{"name":"decreased mitotic centromere clustering at nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0006800"}


id: PBO:0017861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght4","termid":"PBO:0017861"}


id: GO:0140949
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106969],"is_not":false,"summary":null,"term":"GO:0140949"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl9-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me3.","definition_xrefs":["RHEA:60276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0008276","GO:0003674","GO:0140096","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"histone H3K9 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.355"],"synonyms":[{"name":"histone H3-K9 trimethylation","type":"broad"},{"name":"histone H3K9 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylase activity","type":"exact"},{"name":"histone H3K9 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140949","terms_by_termid":{"GO:0140949":null}}


id: PBO:0041689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 2","termid":"PBO:0041689"}


id: GO:0034880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citrazinate + H2O = 2,3,6-trihydroxyisonicotinate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on superoxide radicals as acceptor","termid":"GO:0016721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"citrazinate dehydrogenase activity","termid":"GO:0034880"}


id: PBO:0071673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 5","termid":"PBO:0071673"}


id: GO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"positively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034129"}


id: PBO:0055689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipopolysaccharide induced TNF factor","termid":"PBO:0055689"}


id: PATO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being many folds greater relative to the normal average.","definition_xrefs":["PATOC:UMH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gigantic","synonyms":[{"name":"giant","type":"exact"}],"termid":"PATO:0001940"}


id: PBO:0043140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 8","termid":"PBO:0043140"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: PBO:0028130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_deacetylase_activity","termid":"PBO:0028130"}


id: PBO:0075612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase 1","termid":"PBO:0075612"}


id: GO:0047884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD + H2O = AMP + FMN.","definition_xrefs":["RHEA:13889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"FAD diphosphatase activity","secondary_identifiers":["MetaCyc:FAD-PYROPHOSPHATASE-RXN","EC:3.6.1.18"],"synonyms":[{"name":"FAD nucleotidohydrolase activity","type":"related"},{"name":"FAD pyrophosphatase activity","type":"exact"},{"name":"FAD pyrophosphohydrolase activity","type":"exact"},{"name":"flavin adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"flavine adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"riboflavin adenine dinucleotide pyrophosphatase activity","type":"related"},{"name":"riboflavine adenine dinucleotide pyrophosphatase activity","type":"related"}],"termid":"GO:0047884"}


id: FYPO:0002047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show decreased sensitivity to heat shock, when the cell is also subject to nitrogen starvation. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to heat shock","termid":"FYPO:0002045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to heat shock during nitrogen starvation","synonyms":[{"name":"increased cell population growth during cellular response to heat shock during nitrogen starvation","type":"exact"},{"name":"increased growth during cellular response to heat shock during nitrogen starvation","type":"exact"},{"name":"resistance to heat shock during nitrogen depletion","type":"exact"},{"name":"resistance to heat shock during nitrogen deprivation","type":"exact"},{"name":"resistant to heat shock during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002047"}


id: PBO:0044802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 103A","termid":"PBO:0044802"}


id: PBO:0057738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1468","termid":"PBO:0057738"}


id: PATO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a downward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epinastic","termid":"PATO:0000945"}


id: PBO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD34C antisense RNA 1","termid":"PBO:0039533"}


id: FYPO:0001130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nucleus during vegetative growth","synonyms":[{"name":"increased protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001130"}


id: GO:0098994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell envelope components to allow entry into the host cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope","secondary_identifiers":["VZ:3938"],"synonyms":[{"name":"disruption of host cell envelope during viral entry","type":"exact"}],"termid":"GO:0098994"}


id: PATO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000875 irritable (obsolete PATO:0000875)","termid":"PATO:0000875"}


id: GO:1901858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["PMID:23150719","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"regulation of mtDNA metabolic process","type":"exact"},{"name":"regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901858"}


id: PBO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4","termid":"PBO:0048868"}


id: PBO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF1","termid":"PBO:0003906"}


id: PBO:0054880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2294","termid":"PBO:0054880"}


id: GO:0007190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme adenylate cyclase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adenylate cyclase activity","termid":"GO:0045762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase activation","type":"exact"},{"name":"adenylate cyclase activator","type":"related"},{"name":"adenylyl cyclase activation","type":"exact"}],"termid":"GO:0007190"}


id: GO:0000095
data:
  {"annotated_genes":["SJAG_01589","SJAG_01890"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75212,78778],"is_not":false,"summary":null,"term":"GO:0000095"}]},"cv_name":"molecular_function","definition":"Enables the transfer of S-adenosylmethionine from one side of a membrane to the other. S-adenosylmethionine is S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"S-adenosyl-L-methionine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8855062","GO:0015177"],"synonyms":[{"name":"S-adenosyl methionine permease activity","type":"exact"},{"name":"S-adenosyl methionine transporter activity","type":"exact"},{"name":"S-adenosylmethionine permease activity","type":"exact"},{"name":"S-adenosylmethionine transmembrane transporter activity","type":"exact"},{"name":"S-adenosylmethionine transporter activity","type":"broad"},{"name":"SAM transmembrane transporter activity","type":"exact"}],"termid":"GO:0000095","terms_by_termid":{"GO:0000095":null}}


id: PBO:0030088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_leucine_nitrogen_source","termid":"PBO:0030088"}


id: GO:0010590
data:
  {"annotated_genes":["SJAG_02366","SJAG_01774","SJAG_01436","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89895,97240],"is_not":false,"summary":null,"term":"GO:0010590"},{"annotations":[85608,104380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["PMID:21246752","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:19959363","PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01436":null,"SJAG_01774":null,"SJAG_02366":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902467","GO:2001041"],"synonyms":[{"name":"regulation of cell separation after cytokinesis","type":"related"},{"name":"regulation of cell separation following cytokinesis","type":"related"},{"name":"regulation of mitotic cytokinetic cell separation","type":"exact"}],"termid":"GO:0010590","terms_by_termid":{"GO:0010590":null,"GO:2001043":null}}


id: GO:0003727
data:
  {"annotated_genes":["SJAG_03995","SJAG_02790","SJAG_05240","SJAG_00884","SJAG_03747","SJAG_05010","SJAG_03954","SJAG_02043","SJAG_01436","SJAG_02469","SJAG_01643","SJAG_03460","SJAG_04601","SJAG_04427","SJAG_02621","SJAG_00857","SJAG_02808","SJAG_00145","SJAG_04880","SJAG_03745","SJAG_04574","SJAG_04210","SJAG_01327","SJAG_01910","SJAG_03448","SJAG_03283","SJAG_03916","SJAG_00425","SJAG_03876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69936,70728,72483,75492,76059,87188,87479,102814,103653,106975,111944],"is_not":false,"summary":null,"term":"GO:0003727"},{"annotations":[85319,100632,85358,84945,87868,105648,93687,94685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008143"},{"annotations":[94686,113107,91720,91241,106398,91924,111585,102726,109458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008266"},{"annotations":[72115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008187"},{"annotations":[103710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00425":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_01327":null,"SJAG_01436":null,"SJAG_01643":null,"SJAG_01910":null,"SJAG_02043":null,"SJAG_02469":null,"SJAG_02621":null,"SJAG_02790":null,"SJAG_02808":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03460":null,"SJAG_03745":null,"SJAG_03747":null,"SJAG_03876":null,"SJAG_03916":null,"SJAG_03954":null,"SJAG_03995":null,"SJAG_04210":null,"SJAG_04427":null,"SJAG_04574":null,"SJAG_04601":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"single-stranded RNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003728"],"synonyms":[{"name":"ssRNA binding","type":"exact"}],"termid":"GO:0003727","terms_by_termid":{"GO:0003727":null,"GO:0008143":null,"GO:0008187":null,"GO:0008266":null,"GO:0033592":null}}


id: SO:0000564
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one DJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_J_C_cluster","synonyms":[{"name":"V DJ J C cluster","type":"exact"},{"name":"V-(DJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000564"}


id: GO:1903584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24526689"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deubiquitination (obsolete GO:1903584)","synonyms":[{"name":"regulation of histone deubiquitinylation","type":"exact"},{"name":"regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903584"}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["GOC:yaf","PMID:20711475","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: GO:0018051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-tryptophan amide by hydrolysis and oxidation of an interior Trp-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0098"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-tryptophan amidation (obsolete GO:0018051)","termid":"GO:0018051"}


id: PBO:0067024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 37, pseudogene","termid":"PBO:0067024"}


id: PBO:0059810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 36","termid":"PBO:0059810"}


id: PBO:0051608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 32","termid":"PBO:0051608"}


id: FYPO:0007410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more residues within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II is abnormal.","definition_xrefs":["PomBase:mah","GO:0070816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal RNA polymerase II C-terminal domain phosphorylation","synonyms":[{"name":"abnormal phosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"FYPO:0007410"}


id: PBO:0039551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 45","termid":"PBO:0039551"}


id: PBO:0087473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both RNase MRP and nuclear RNase P; RNase MRP cleaves pre-rRNA, while nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs","termid":"PBO:0087473"}


id: GO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the left/right axis of the embryonic heart tube in space to define an area or volume in which specific patterns of cell differentiation will take place.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left/right pattern formation","termid":"GO:0060972"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube left/right pattern formation","termid":"GO:0060971"}


id: GO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + NAD+ = H+ + NADH + orotate.","definition_xrefs":["RHEA:13513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (NADH) activity","secondary_identifiers":["MetaCyc:OROTATE-REDUCTASE-NADH-RXN","EC:1.3.1.14","KEGG_REACTION:R01869"],"synonyms":[{"name":"(S)-dihydroorotate:NAD+ oxidoreductase activity","type":"related"},{"name":"orotate reductase (NADH) activity","type":"exact"}],"termid":"GO:0004589"}


id: PBO:0029031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere","termid":"PBO:0029031"}


id: PBO:0083472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPL12A/YEL054C","termid":"PBO:0083472"}


id: PBO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cordycepin","termid":"PBO:0029136"}


id: PBO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein","termid":"PBO:0045459"}


id: GO:1900451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"positively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate receptor signaling pathway","synonyms":[{"name":"activation of glutamate receptor signaling pathway","type":"narrow"},{"name":"activation of glutamate signaling pathway","type":"exact"},{"name":"activation of glutamate signalling pathway","type":"exact"},{"name":"positive regulation of glutamate signaling pathway","type":"exact"},{"name":"positive regulation of glutamate signalling pathway","type":"exact"},{"name":"up regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up regulation of glutamate signaling pathway","type":"exact"},{"name":"up regulation of glutamate signalling pathway","type":"exact"},{"name":"up-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signalling pathway","type":"exact"},{"name":"upregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"upregulation of glutamate signaling pathway","type":"exact"},{"name":"upregulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900451"}


id: GO:1903284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GO_REF:0000059","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:23507046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutathione peroxidase activity","termid":"GO:1903282"},{"relation_name":"is_a","term_name":"positive regulation of peroxidase activity","termid":"GO:2000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutathione peroxidase activity","synonyms":[{"name":"activation of GSH peroxidase activity","type":"narrow"},{"name":"activation of glutathione peroxidase activity","type":"narrow"},{"name":"activation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"activation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"activation of reduced glutathione peroxidase activity","type":"narrow"},{"name":"activation of selenium-glutathione peroxidase activity","type":"narrow"},{"name":"enhancement of GPX activity","type":"exact"},{"name":"positive regulation of GSH peroxidase activity","type":"exact"},{"name":"positive regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"positive regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"positive regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"up regulation of GSH peroxidase activity","type":"exact"},{"name":"up regulation of glutathione peroxidase activity","type":"exact"},{"name":"up regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"up regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"up regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"up-regulation of GSH peroxidase activity","type":"exact"},{"name":"up-regulation of glutathione peroxidase activity","type":"exact"},{"name":"up-regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"up-regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"up-regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"upregulation of GSH peroxidase activity","type":"exact"},{"name":"upregulation of glutathione peroxidase activity","type":"exact"},{"name":"upregulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"upregulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"upregulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"upregulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903284"}


id: PBO:0077353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM92 antisense RNA 1","termid":"PBO:0077353"}


id: SO:0000645
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The reverse complement of the primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_primary_transcript","synonyms":[{"name":"antisense primary transcript","type":"exact"}],"termid":"SO:0000645"}


id: GO:0021678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0838580343","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"ventricular system development","termid":"GO:0021591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"third ventricle development","termid":"GO:0021678"}


id: PBO:0055805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 1","termid":"PBO:0055805"}


id: FYPO:0002872
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the endoplasmic reticulum (ER) is abnormal. In fission yeast, the ER is normally located in the cell cortex and tethered to the plasma membrane.","definition_xrefs":["PMID:23041194","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum localization","synonyms":[{"name":"abnormal ER localization","type":"exact"},{"name":"abnormal endoplasmic reticulum localisation","type":"exact"},{"name":"abnormal endoplasmic reticulum localization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002872"}


id: PBO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1","termid":"PBO:0090405"}


id: PBO:0042328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD48 molecule","termid":"PBO:0042328"}


id: PBO:0077553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 259","termid":"PBO:0077553"}


id: PBO:0039386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 1C","termid":"PBO:0039386"}


id: PBO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 32","termid":"PBO:0072468"}


id: PATO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's structureresembling an irregular meshwork with cross-linking struts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trabecular","termid":"PATO:0002121"}


id: PBO:0065562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 2","termid":"PBO:0065562"}


id: GO:0140533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the host's RNAi-mediated antiviral immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host RNAi-mediated antiviral immune response","synonyms":[{"name":"suppression of host RNAi-mediated antiviral immune response","type":"exact"},{"name":"suppression of host RNAi-mediated antiviral immunity","type":"exact"},{"name":"suppression of host RNAi-mediated gene silencing","type":"exact"}],"termid":"GO:0140533"}


id: PBO:0063446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE7A divergent transcript","termid":"PBO:0063446"}


id: FYPO:0006755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"decreased chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"decreased chromatin binding at promoter element during glucose deprivation","type":"related"},{"name":"reduced chromatin binding at promoter element during glucose starvation","type":"exact"}],"termid":"FYPO:0006755"}


id: PBO:0109976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated heterodimeric guanine nucleotide exchange factor (GEF) subunit Aut12","termid":"PBO:0109976"}


id: GO:0051752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [phospho-alpha-glucan] + H2O = AMP + O-phospho-[phospho-alpha-glucan] + phosphate.","definition_xrefs":["PMID:15618411","EC:2.7.9.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoglucan, water dikinase activity","secondary_identifiers":["MetaCyc:2.7.9.5-RXN"],"synonyms":[{"name":"ATP:phospho-alpha-glucan, water phosphotransferase activity","type":"related"},{"name":"OK1","type":"related"},{"name":"PWD","type":"related"}],"termid":"GO:0051752"}


id: GO:0051632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine uptake","termid":"GO:0051631"},{"relation_name":"is_a","term_name":"negative regulation of amine transport","termid":"GO:0051953"},{"relation_name":"negatively_regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine uptake","synonyms":[{"name":"down regulation of acetylcholine uptake","type":"exact"},{"name":"down-regulation of acetylcholine uptake","type":"exact"},{"name":"downregulation of acetylcholine uptake","type":"exact"},{"name":"negative regulation of acetylcholine import","type":"exact"}],"termid":"GO:0051632"}


id: CHEBI:17858
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione disulfide","termid":"CHEBI:17858"}


id: GO:0003755
data:
  {"annotated_genes":["SJAG_00950","SJAG_02413","SJAG_04352","SJAG_02620","SJAG_00602","SJAG_04155","SJAG_03905","SJAG_03238","SJAG_00470","SJAG_01005","SJAG_03601","SJAG_02551","SJAG_01246","SJAG_00078","SJAG_01714","SJAG_02308","SJAG_01270"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57757,70289,71616,71873,72470,74646,74807,75057,75225,75364,76836,76849,76918,78601,88795,100818,101737],"is_not":false,"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16237","Reactome:R-HSA-2022073","GO:0004752","Reactome:R-HSA-9626816","GO:0042028","MetaCyc:PEPTIDYLPROLYL-ISOMERASE-RXN"],"synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"narrow"},{"name":"PPIase activity","type":"related"},{"name":"cis-trans proline isomerase activity","type":"exact"},{"name":"cyclophilin activity","type":"related"},{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"immunophilin","type":"related"},{"name":"juglone-sensitive cis-trans proline isomerase activity","type":"narrow"},{"name":"juglone-sensitive peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"parvulin","type":"related"},{"name":"peptide bond isomerase activity","type":"related"},{"name":"peptidyl-prolyl isomerase B reaction","type":"related"},{"name":"peptidylproline cis-trans-isomerase activity","type":"related"},{"name":"peptidylprolyl cis-trans isomerase activity","type":"related"},{"name":"peptidylprolyl isomerase activity","type":"related"},{"name":"rotamase activity","type":"related"}],"termid":"GO:0003755","terms_by_termid":{"GO:0003755":null}}


id: PBO:0053759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1001","termid":"PBO:0053759"}


id: GO:0015451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Primary active transport of a solute across a membrane driven by decarboxylation of a cytoplasmic substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.","definition_xrefs":["TC:3.B.-.-.-","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"decarboxylation-driven active transmembrane transporter activity","secondary_identifiers":["EC:7.2.4.4","EC:7.2.4.5","EC:7.2.4.3","EC:7.2.4.1","TC:3.B","EC:7.2.4.2"],"synonyms":[{"name":"decarboxylation-driven transporter","type":"related"}],"termid":"GO:0015451"}


id: PBO:0068883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 123, pseudogene","termid":"PBO:0068883"}


id: GO:0099143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The actin cytoskeleton that is part of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton","termid":"GO:0015629"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton","termid":"GO:0099569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton","termid":"GO:0099143"}


id: PR:Q9Y7P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1450.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1450.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.15","synonyms":[{"name":"Spom972h-SPCC1450.15","type":"exact"}],"termid":"PR:Q9Y7P2"}


id: GO:0015459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a potassium channel.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"potassium channel regulator activity","synonyms":[{"name":"potassium channel gating activity","type":"exact"}],"termid":"GO:0015459"}


id: PBO:0030329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphoinositide_level","termid":"PBO:0030329"}


id: GO:0010525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA-mediated transposition. RNA-mediated transposition is a type of transpositional recombination which occurs via an RNA intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposition, RNA-mediated (obsolete GO:0010525)","termid":"GO:0010525"}


id: FYPO:0002970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is increased during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to mitotic spindle pole body","termid":"FYPO:0002969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"increased protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"increased protein localization to mitotic SPB during metaphase","type":"exact"},{"name":"increased protein localization to mitotic spindle pole body during mitotic metaphase","type":"exact"},{"name":"increased protein localization to spindle pole body during metaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0002970"}


id: PBO:0031311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_assembly","termid":"PBO:0031311"}


id: PBO:0038414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_transports_or_maintains_localization_of","termid":"PBO:0038414"}


id: GO:0098674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the neuronal dense core vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle membrane","termid":"GO:0099012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of neuronal dense core vesicle membrane","termid":"GO:0098674"}


id: GO:0010919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010919"}


id: PBO:0085003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of cytosolic calcium homeostasis; localizes to the plasma membrane, concentrating at the bud neck during cell division; regulated by Crz1p through a CDRE promoter element; non-essential gene; putative transporter with sequence similarity to human SLC10A7; functional homolog of C. albicans RCH1","termid":"PBO:0085003"}


id: PBO:0087588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches","termid":"PBO:0087588"}


id: PR:Q10146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease rrp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.01","synonyms":[{"name":"Spom972h-rrp6","type":"exact"},{"name":"ribosomal RNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10146"}


id: PBO:0084604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YOR088W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YOR087W","termid":"PBO:0084604"}


id: PBO:0083846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hMtr3p (EXOSC6)","termid":"PBO:0083846"}


id: GO:0023056
data:
  {"annotated_genes":["SJAG_03903","SJAG_00845","SJAG_01199","SJAG_06592","SJAG_01181","SJAG_00318","SJAG_04457","SJAG_06622","SJAG_01978","SJAG_02682","SJAG_04496","SJAG_01254","SJAG_05184","SJAG_00329","SJAG_00781","SJAG_03048","SJAG_04910","SJAG_03405","SJAG_01587","SJAG_05030","SJAG_02486","SJAG_00209","SJAG_01805","SJAG_02945","SJAG_00457","SJAG_02135","SJAG_04460","SJAG_04776","SJAG_02183","SJAG_01632","SJAG_02231","SJAG_00143","SJAG_01837","SJAG_03907","SJAG_01150","SJAG_03828","SJAG_04598","SJAG_01886","SJAG_00082","SJAG_00027","SJAG_00402","SJAG_02424","SJAG_04814","SJAG_06588","SJAG_03453","SJAG_04259","SJAG_03089","SJAG_00561","SJAG_04551","SJAG_03568","SJAG_03371","SJAG_00954","SJAG_06621","SJAG_03936","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001235"},{"annotations":[98405,107473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[100608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043123"},{"annotations":[84116,106652,99212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090263"},{"annotations":[95670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046330"},{"annotations":[110409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[113379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[105382,105380,105384,105385,105381,105383,105386,108356,109040,91341,114075,114987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[112249,86756,83959,111265,100013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[98996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051897"},{"annotations":[87067,102274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"},{"annotations":[85890,98647,89856,107001,83335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[113700,110043,110042,110044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[72760,101475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[74743,75843,90371,75083,92205,107018,85293,105713,109429,115077,84135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[87099,93895,103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of a signaling process.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"signaling","termid":"GO:0023052"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00329":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00954":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01254":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01886":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_04259":null,"SJAG_04457":null,"SJAG_04460":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04598":null,"SJAG_04776":null,"SJAG_04814":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of signaling process","type":"related"},{"name":"positive regulation of signalling process","type":"exact"}],"termid":"GO:0023056","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0043123":null,"GO:0046330":null,"GO:0046579":null,"GO:0050850":null,"GO:0051897":null,"GO:0062038":null,"GO:0090263":null,"GO:0090267":null,"GO:1900745":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null,"GO:2001235":null}}


id: PBO:0034315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_neural_circuit_with","termid":"PBO:0034315"}


id: GO:0007591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a chitin-based cuticle, which is then replaced by a new cuticle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, chitin-based cuticle","synonyms":[{"name":"chitin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0007591"}


id: PR:O94339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug96 gene.","definition_xrefs":["UniProtKB:O94339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 96 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.06c","synonyms":[{"name":"Spom972h-mug96","type":"exact"}],"termid":"PR:O94339"}


id: GO:0099514
data:
  {"annotated_genes":["SJAG_02453","SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90236,84753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048490"}]},"cv_name":"biological_process","definition":"The directed movement of synaptic vesicles along cytoskeletal fibers such as microfilaments or microtubules within a cell, powered by molecular motors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle transport","termid":"GO:0048489"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_02453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle cytoskeletal transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099514","terms_by_termid":{"GO:0048490":null}}


id: PBO:0026785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ascus_morphology","termid":"PBO:0026785"}


id: PBO:0076161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1P4-STRA6LP readthrough","termid":"PBO:0076161"}


id: GO:0033351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-D-apiose, uridinediphosphoapiose, a substance composed of apiose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-D-apiose metabolic process","synonyms":[{"name":"UDP-D-apiose metabolism","type":"exact"}],"termid":"GO:0033351"}


id: PBO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0018000"}


id: PBO:0031818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_autophagy","termid":"PBO:0031818"}


id: GO:1904777
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to cell cortex","type":"exact"},{"name":"down regulation of protein localization to cell cortex","type":"exact"},{"name":"down-regulation of protein localisation to cell cortex","type":"exact"},{"name":"down-regulation of protein localization to cell cortex","type":"exact"},{"name":"downregulation of protein localisation to cell cortex","type":"exact"},{"name":"downregulation of protein localization to cell cortex","type":"exact"},{"name":"inhibition of protein localisation to cell cortex","type":"narrow"},{"name":"inhibition of protein localization to cell cortex","type":"narrow"},{"name":"negative regulation of protein localisation to cell cortex","type":"exact"}],"termid":"GO:1904777","terms_by_termid":{"GO:0140325":null}}


id: PBO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035915"}


id: PBO:0043180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1","termid":"PBO:0043180"}


id: PBO:0075776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 5","termid":"PBO:0075776"}


id: SO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcript feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:transcript_ablation","type":"exact"},{"name":"VEP:transcript_ablation","type":"exact"},{"name":"transcript ablation","type":"exact"}],"termid":"SO:0001893"}


id: GO:0050685
data:
  {"annotated_genes":["SJAG_02018","SJAG_02058","SJAG_00504","SJAG_01040","SJAG_01919","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74593,74666,88103,73491,107418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA processing.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA processing","termid":"GO:0050684"},{"relation_name":"is_a","term_name":"positive regulation of mRNA metabolic process","termid":"GO:1903313"},{"relation_name":"positively_regulates","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00504":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA processing","type":"narrow"},{"name":"stimulation of mRNA processing","type":"narrow"},{"name":"up regulation of mRNA processing","type":"exact"},{"name":"up-regulation of mRNA processing","type":"exact"},{"name":"upregulation of mRNA processing","type":"exact"}],"termid":"GO:0050685","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: GO:0006174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into dADP, deoxyadenosine diphosphate, to produce dATP.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete dADP phosphorylation (obsolete GO:0006174)","termid":"GO:0006174"}


id: GO:0033152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin heavy chains V, D, and J gene segments are joined, and for immunoglobulin light chains V and J gene segments are joined.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"},{"relation_name":"is_a","term_name":"V(D)J recombination","termid":"GO:0033151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin V(D)J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"exact"},{"name":"immunoglobulin V-D-J joining","type":"narrow"},{"name":"immunoglobulin V-D-J recombination","type":"narrow"},{"name":"immunoglobulin V-J joining","type":"narrow"},{"name":"immunoglobulin V-J recombination","type":"narrow"}],"termid":"GO:0033152"}


id: PBO:0066303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 5","termid":"PBO:0066303"}


id: GO:0098022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of capsid decoration composed of fiber structures.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, decoration","termid":"GO:0098021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, fiber","synonyms":[{"name":"head/capsid fiber","type":"related"}],"termid":"GO:0098022"}


id: GO:0072515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of trehalose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore, that occurs as a result of a desiccation stimulus. A desiccation stimulus signals extreme dryness resulting from the prolonged deprivation of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose transport in response to water deprivation","termid":"GO:0072514"},{"relation_name":"part_of","term_name":"cellular response to desiccation","termid":"GO:0071465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"trehalose transport in response to desiccation","termid":"GO:0072515"}


id: PBO:0030031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenylyl_cyclase_activity","termid":"PBO:0030031"}


id: GO:0072122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of extraglomerular glomerular mesangium cells by cell division, resulting in the expansion of their population. Extraglomerular mesangial cells (also known as lacis cells, Goormaghtigh cells) are light-staining cells in the kidney found outside the glomerulus, near the vascular pole and macula densa.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extraglomerular mesangial cell proliferation","synonyms":[{"name":"Goormaghtigh proliferation","type":"related"},{"name":"lacis cell proliferation","type":"related"}],"termid":"GO:0072122"}


id: PBO:0082170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent proline methyltransferase; catalyzes the dimethylation of ribosomal proteins Rpl12 and Rps25 at N-terminal proline residues; has a role in protein synthesis; fusion protein localizes to the cytoplasm","termid":"PBO:0082170"}


id: FYPO:0003946
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115830],"is_not":false,"summary":null,"term":"FYPO:0003946"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_03596":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143"],"name":"delayed onset of protein localization to cell division site","references_by_uniquename":{"PMID:25866389":null},"synonyms":[{"name":"delayed onset of protein localisation to cell division site","type":"exact"},{"name":"delayed onset of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"delayed onset of protein recruitment to cell division site","type":"related"},{"name":"delayed protein localization to cell division site","type":"exact"}],"termid":"FYPO:0003946","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0003946":null}}


id: PBO:0077076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAM1 antisense RNA 1","termid":"PBO:0077076"}


id: PBO:0081957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZP3 pseudogene 1","termid":"PBO:0081957"}


id: PATO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000789 respiratory function value (obsolete PATO:0000789)","termid":"PATO:0000789"}


id: PATO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001209 absolute function (obsolete PATO:0001209)","termid":"PATO:0001209"}


id: PBO:0078907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 16-1","termid":"PBO:0078907"}


id: PBO:0076502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 2, pseudogene","termid":"PBO:0076502"}


id: GO:0003926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete ARF small monomeric GTPase activity (obsolete GO:0003926)","synonyms":[{"name":"ARF small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003926"}


id: PBO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csm1/Pcs1","termid":"PBO:0008152"}


id: PBO:0055934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 40","termid":"PBO:0055934"}


id: GO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-nitrotoluene metabolic process","termid":"GO:0019257"},{"relation_name":"is_a","term_name":"nitrotoluene catabolic process","termid":"GO:0046263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"4-nitrotoluene catabolic process","secondary_identifiers":["MetaCyc:P421-PWY"],"synonyms":[{"name":"4-nitrotoluene breakdown","type":"exact"},{"name":"4-nitrotoluene catabolism","type":"exact"},{"name":"4-nitrotoluene degradation","type":"exact"},{"name":"4NT catabolic process","type":"exact"},{"name":"4NT catabolism","type":"exact"}],"termid":"GO:0019258"}


id: PBO:0063837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phosphohydroxy-L-lysine phospho-lyase","termid":"PBO:0063837"}


id: PATO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000348 composition value (obsolete PATO:0000348)","termid":"PATO:0000348"}


id: GO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + vinorine = H2O + NADP+ + vomilenine.","definition_xrefs":["EC:1.14.14.104","RHEA:17257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vinorine hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05877","MetaCyc:1.14.13.75-RXN"],"synonyms":[{"name":"vinorine,NADPH:oxygen oxidoreductase (21alpha-hydroxylating)","type":"related"}],"termid":"GO:0050596"}


id: PBO:0059367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 2","termid":"PBO:0059367"}


id: GO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an antisigma factor, a factor which inhibits the ability of the sigma factor to function as a transcriptional initiator.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"antisigma factor binding","synonyms":[{"name":"antisigma factor antagonist activity","type":"narrow"}],"termid":"GO:0045152"}


id: GO:0060586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A chemical homeostatic process involved in the maintenance of a steady state level of iron within extracellular body fluids, such as blood, xylem or phloem, of a multicellular organism. This is distinct from maintenance of cellular homeostasis, which occurs within a cell.","definition_xrefs":["PMID:31431773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"},{"relation_name":"is_a","term_name":"multicellular organismal-level chemical homeostasis","termid":"GO:0140962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"multicellular organismal-level iron ion homeostasis","synonyms":[{"name":"multicellular organismal iron ion homeostasis","type":"exact"}],"termid":"GO:0060586"}


id: GO:0008307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a muscle fiber.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of muscle","termid":"GO:0008307"}


id: PBO:0110474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 12 homolog","termid":"PBO:0110474"}


id: GO:0030204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mucopolysaccharide metabolic process","termid":"GO:1903510"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan metabolic process","termid":"GO:0050654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"chondroitin sulfate metabolic process","synonyms":[{"name":"chondroitin sulfate metabolism","type":"exact"},{"name":"chondroitin sulphate metabolic process","type":"exact"},{"name":"chondroitin sulphate metabolism","type":"exact"}],"termid":"GO:0030204"}


id: FYPO:0004563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}


id: PBO:0053018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMTOR5 antisense RNA 1","termid":"PBO:0053018"}


id: PBO:0025539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid metabolism disorder","termid":"PBO:0025539"}


id: RO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_concretized_as","termid":"RO:0000058"}


id: GO:0044612
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99277],"is_not":false,"summary":null,"term":"GO:0044612"}]},"cv_name":"cellular_component","definition":"A substructure of the nuclear pore complex (NPC) that serves to connect members of the central transport channel (composed of FG-nucleoporins) to the core scaffold (composed of the inner and outer NPC rings). In S. cerevisiae, the linkers are Nic96p and Nup82p. In vertebrates, they are Nup93 and Nup88. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. Both linkers can be isolated in association with specific FG-nucleoporins, complexes that are sometimes referred to as the Nic96 complex (Nic96p-Nsp1p-Nup49p-Nup57p) and the Nup82 complex (Nup82p-Nup116p-Nup159p-Gle2p).","definition_xrefs":["PMID:18046406","PMID:20947011","PMID:22419078","GOC:dgf","PMID:19524430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005643","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear pore linkers","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nic96 complex","type":"related"},{"name":"Nup82 complex","type":"related"}],"termid":"GO:0044612","terms_by_termid":{"GO:0044612":null}}


id: GO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monosaccharide biosynthetic process","synonyms":[{"name":"monosaccharide formation","type":"exact"},{"name":"monosaccharide synthesis","type":"exact"},{"name":"monosaccharide anabolism","type":"exact"},{"name":"monosaccharide biosynthesis","type":"exact"}],"termid":"GO:0046364"}


id: PBO:0043904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich secretory protein LCCL domain containing 1","termid":"PBO:0043904"}


id: GO:0097628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a distal tip cell.","definition_xrefs":["CL:0000661","GOC:mm2","PMID:24968003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tip cell migration","termid":"GO:0097628"}


id: PBO:0039760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1","termid":"PBO:0039760"}


id: PBO:0073898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 4","termid":"PBO:0073898"}


id: PBO:0083754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP; functions with methyltransferase Bud23p; predominantly nucleolar in distribution; required for 18S rRNA synthesis","termid":"PBO:0083754"}


id: PBO:0075855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 4","termid":"PBO:0075855"}


id: GO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of D-glucose into the blood by absorption from the small intestine.","definition_xrefs":["PMID:5601832","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal hexose absorption","termid":"GO:0106001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal D-glucose absorption","termid":"GO:0001951"}


id: GO:0032496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["ISBN:0721601464","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipopolysaccharide","synonyms":[{"name":"response to LPS","type":"exact"},{"name":"response to endotoxin","type":"broad"}],"termid":"GO:0032496"}


id: PR:000050503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOG/XMAP215 microtubule plus end tracking polymerase Dis1 that has been phosphorylated at the positions equivalent to Thr-279, Ser-293, Ser-300, Ser-551, Ser-556, and Ser-590 of the amino acid sequence represented by UniProtKB:Q09933. Example: UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046.","definition_xrefs":["PMID:16920624","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","termid":"PR:000050502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dis1/Phos:(T279,S293,S300,S551,S556,S590)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom-dis1/Phos:1","type":"exact"},{"name":"UniProtKB:Q09933, Thr-279, MOD:00047|Ser-293/Ser-300/Ser-551/Ser-556/Ser-590, MOD:00046","type":"narrow"},{"name":"dis1/Phos:(T279,S293,S300,S551,S556,S590)","type":"exact"}],"termid":"PR:000050503"}


id: PBO:0065441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 2","termid":"PBO:0065441"}


id: GO:0016336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a polarized larval imaginal disc epithelium.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"morphogenesis of larval imaginal disc epithelium","termid":"GO:0016335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of polarity of larval imaginal disc epithelium","termid":"GO:0016336"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["MetaCyc:GSADENYLATION-RXN","RHEA:18589"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: PBO:0067451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 574, pseudogene","termid":"PBO:0067451"}


id: PBO:0063569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase D","termid":"PBO:0063569"}


id: GO:1901619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule as a result of deprivation of nitrogen.","definition_xrefs":["GOC:TermGenie","PMID:23074192"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA methylation in response to nitrogen starvation (obsolete GO:1901619)","termid":"GO:1901619"}


id: PBO:0051761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7","termid":"PBO:0051761"}


id: PBO:0038277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified","termid":"PBO:0038277"}


id: GO:1905690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a nucleus into its constituent components.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:autophagy","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus disassembly","synonyms":[{"name":"cell nucleus disassembly","type":"exact"}],"termid":"GO:1905690"}


id: PBO:0082316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF/CREB family basic leucine zipper (bZIP) transcription factor; binds as a homodimer to the ATF/CREB consensus sequence TGACGTCA; important for carbon source utilization; target genes include GRE2 and COS8; ACA1 has a paralog, CST6, that arose from the whole genome duplication","termid":"PBO:0082316"}


id: PBO:0072442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 6","termid":"PBO:0072442"}


id: PBO:0031763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_replicated_DNA","termid":"PBO:0031763"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: PBO:0059782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 8","termid":"PBO:0059782"}


id: GO:0006287
data:
  {"annotated_genes":["SJAG_02818","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73708,74460],"is_not":false,"summary":null,"term":"GO:0006287"}]},"cv_name":"biological_process","definition":"Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template.","definition_xrefs":["ISBN:1550091131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"base-excision repair, gap-filling","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0006287","terms_by_termid":{"GO:0006287":null}}


id: GO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The post-translational removal of peptide sequences from within a protein sequence, by a process not involving inteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"non-intein-mediated protein splicing","termid":"GO:0030909"}


id: PBO:0003451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdc27","termid":"PBO:0003451"}


id: PBO:0011989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2 (predicted)","termid":"PBO:0011989"}


id: SO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which a change has occurred within the region of the splice site, either within 1-3 bases of the exon or 3-8 bases of the intron.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_region_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:splicing","type":"related"},{"name":"Jannovar:splice_region_variant","type":"exact"},{"name":"VAAST:splice_region_variant","type":"exact"},{"name":"VEP:splice_region_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_BRANCH","type":"related"},{"name":"snpEff:SPLICE_SITE_BRANCH_U12","type":"related"},{"name":"snpEff:SPLICE_SITE_REGION","type":"exact"},{"name":"splice region variant","type":"exact"}],"termid":"SO:0001630"}


id: PBO:0052599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 6","termid":"PBO:0052599"}


id: PBO:0003898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, DUF1773 family","termid":"PBO:0003898"}


id: GO:0040038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes.","definition_xrefs":["ISBN:0198506732","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"polar body extrusion after meiotic divisions","termid":"GO:0040038"}


id: GO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hepatocyte during the development of the liver. Hepatocytes emerge from the hepatic epithelium, populating the septum transversum and lateral mesenchymal areas of the hepatic lobes.","definition_xrefs":["CL:0000182","PMID:9794819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte cell migration","termid":"GO:0002194"}


id: PBO:0074179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 2","termid":"PBO:0074179"}


id: GO:0004588
data:
  {"annotated_genes":["SJAG_03164","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72990,113429],"is_not":false,"summary":null,"term":"GO:0004588"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_03164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"orotate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:OROPRIBTRANS-RXN","Reactome:R-HSA-73567","RHEA:10380"],"synonyms":[{"name":"OPRT activity","type":"related"},{"name":"OPRTase activity","type":"related"},{"name":"orotate phosphoribosyl pyrophosphate transferase activity","type":"related"},{"name":"orotic acid phosphoribosyltransferase activity","type":"related"},{"name":"orotidine 5'-monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine phosphoribosyltransferase activity","type":"related"},{"name":"orotidine-5'-phosphate diphosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"orotidylate phosphoribosyltransferase activity","type":"related"},{"name":"orotidylate pyrophosphorylase activity","type":"related"},{"name":"orotidylic acid phosphorylase activity","type":"related"},{"name":"orotidylic acid pyrophosphorylase activity","type":"related"},{"name":"orotidylic phosphorylase activity","type":"related"},{"name":"orotidylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004588","terms_by_termid":{"GO:0004588":null}}


id: FYPO:0003566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body separation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"delayed onset of mitotic spindle pole body separation","synonyms":[{"name":"delayed mitotic spindle pole body separation","type":"exact"},{"name":"delayed onset of mitotic SPB separation","type":"exact"},{"name":"delayed onset of spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"mitotic spindle pole body separation delayed during vegetative growth","type":"exact"}],"termid":"FYPO:0003566"}


id: FYPO:0005267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aluminium ions. Cells stop growing (and may die) at a concentration of aluminium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to aluminium","synonyms":[{"name":"hypersensitive to aluminium","type":"exact"},{"name":"sensitive to aluminium during mitotic cell cycle","type":"related"},{"name":"sensitive to aluminium during vegetative growth","type":"exact"},{"name":"sensitive to aluminium ions","type":"exact"},{"name":"sensitive to aluminum","type":"exact"}],"termid":"FYPO:0005267"}


id: PBO:0088029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB family mitochondrial protein; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; contains transmembrane domain and mitochondrial targeting sequence","termid":"PBO:0088029"}


id: PR:Q9US07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11937:SF13","OMA:SCHPO00696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.02c","secondary_identifiers":["UniProtKB:Q9US07"],"synonyms":[{"name":"Spom972h-ACTR8","type":"exact"}],"termid":"PR:Q9US07"}


id: GO:0036196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zymosterol, (5alpha-cholesta-8,24-dien-3beta-ol).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"zymosterol metabolic process","termid":"GO:0036196"}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: PBO:0089653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 2, Pre8","termid":"PBO:0089653"}


id: GO:0032131
data:
  {"annotated_genes":["SJAG_01971","SJAG_04778","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97817,103462],"is_not":false,"summary":null,"term":"GO:0032131"},{"annotations":[83991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032132"}]},"cv_name":"molecular_function","definition":"Binding to an alkylated residue in DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_04778":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"alkylated DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032131","terms_by_termid":{"GO:0032131":null,"GO:0032132":null}}


id: PBO:0084554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084554"}


id: PBO:0068200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 507","termid":"PBO:0068200"}


id: PBO:0005605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c (predicted)","termid":"PBO:0005605"}


id: PBO:0039301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG14 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039301"}


id: PBO:0064263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing B2","termid":"PBO:0064263"}


id: GO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A protein adaptor that recognizes and binds an RNA molecule modified by C5-methylcytidine.","definition_xrefs":["PMID:28418038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"C5-methylcytidine-containing RNA reader activity","synonyms":[{"name":"C5-methylcytidine-containing RNA binding","type":"related"},{"name":"C5-methylcytosine-containing RNA binding","type":"related"}],"termid":"GO:0062153"}


id: GO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:tb","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"maintenance of RNA location","termid":"GO:0051237"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"maintenance of pole plasm mRNA location","secondary_identifiers":["GO:0048122"],"synonyms":[{"name":"maintenance of oocyte pole plasm mRNA localization","type":"exact"},{"name":"maintenance of pole plasm mRNA localization","type":"related"}],"termid":"GO:0046594"}


id: GO:0016556
data:
  {"annotated_genes":["SJAG_02978","SJAG_00088","SJAG_04065","SJAG_04754","SJAG_00319","SJAG_04610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080156"},{"annotations":[75043,70779,72549,77310,78805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04610":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006381"],"synonyms":[{"name":"mRNA editing","type":"narrow"}],"termid":"GO:0016556","terms_by_termid":{"GO:0080156":null,"GO:1990481":null}}


id: PATO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during dark cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark phase","termid":"PATO:0000501"}


id: PBO:0057730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1305","termid":"PBO:0057730"}


id: PBO:0029250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actin_filament_polymerization","termid":"PBO:0029250"}


id: PR:Q9UTA7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTA7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C25B8.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.11","synonyms":[{"name":"Spom972h-SPAC25B8.11","type":"exact"}],"termid":"PR:Q9UTA7"}


id: PBO:0072086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 16","termid":"PBO:0072086"}


id: FYPO:0007326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial tRNA 3'-end processing is decreased. In mitochondrial tRNA 3'-end processing, the 3' end of a mitochondrial pre-tRNA molecule is converted to that of a mature mitochondrial tRNA.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial RNA 3'-end processing","termid":"FYPO:0004956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial tRNA 3'-end processing","synonyms":[{"name":"decreased mitochondrial tRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial tRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transfer RNA 3'-end processing","type":"exact"},{"name":"reduced mitochondrial tRNA 3'-end processing","type":"exact"}],"termid":"FYPO:0007326"}


id: FYPO:0003341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate","synonyms":[{"name":"multinucleate cells","type":"exact"},{"name":"multiple nuclei","type":"exact"}],"termid":"FYPO:0003341"}


id: PBO:0040737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 3","termid":"PBO:0040737"}


id: GO:0033714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: secondary alcohol + O2 = H2O2 + ketone.","definition_xrefs":["RHEA:23180","EC:1.1.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"secondary-alcohol oxidase activity","secondary_identifiers":["MetaCyc:SECONDARY-ALCOHOL-OXIDASE-RXN","KEGG_REACTION:R02277"],"synonyms":[{"name":"polyvinyl alcohol oxidase activity","type":"related"},{"name":"secondary alcohol oxidase activity","type":"related"},{"name":"secondary-alcohol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0033714"}


id: PR:Q09915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01747","PANTHER:PTHR10145:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.01c","secondary_identifiers":["UniProtKB:Q09915"],"synonyms":[{"name":"Spom972h-SUPT6H","type":"exact"},{"name":"chromatin elongation factor spt6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09915"}


id: GO:0009296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum assembly (obsolete GO:0009296)","synonyms":[{"name":"flagella assembly","type":"exact"},{"name":"flagella biogenesis","type":"related"},{"name":"flagellum assembly","type":"exact"},{"name":"flagellum biogenesis","type":"related"}],"termid":"GO:0009296"}


id: PATO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distance which is greater relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased distance","synonyms":[{"name":"long distance","type":"related"}],"termid":"PATO:0000374"}


id: GO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selected cleavage of the Leu6-Lys7 bond in the pheromone alpha-mating factor.","definition_xrefs":["EC:3.4.23.35"],"gene_count":0,"genotype_count":0,"name":"obsolete barrierpepsin activity (obsolete GO:0004191)","synonyms":[{"name":"Bar proteinase activity","type":"narrow"},{"name":"barrier proteinase activity","type":"related"},{"name":"barrierpepsin activity","type":"exact"},{"name":"extracellular 'barrier' protein activity","type":"related"}],"termid":"GO:0004191"}


id: GO:0070309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a lens fiber cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["PMID:7693735","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"},{"relation_name":"part_of","term_name":"lens fiber cell development","termid":"GO:0070307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell morphogenesis","synonyms":[{"name":"elongation of lens fiber cell","type":"narrow"},{"name":"lens fiber cell morphogenesis during differentiation","type":"exact"},{"name":"lens fibre cell morphogenesis","type":"exact"}],"termid":"GO:0070309"}


id: PBO:0109939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, splicosomal Prp16","termid":"PBO:0109939"}


id: PBO:0070628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 12","termid":"PBO:0070628"}


id: PBO:0064536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial pseudogene 1","termid":"PBO:0064536"}


id: PBO:0067021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 34, pseudogene","termid":"PBO:0067021"}


id: GO:2001107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Rho guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of guanyl-nucleotide exchange factor activity","termid":"GO:1905098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho guanyl-nucleotide exchange factor activity","synonyms":[{"name":"negative regulation of Rho guanine nucleotide exchange factor","type":"exact"},{"name":"negative regulation of RhoGEF","type":"exact"}],"termid":"GO:2001107"}


id: GO:0005597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(XVI) chains; type XVI trimers can associate with microfibrils.","definition_xrefs":["GOC:mah","PMID:12782140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XVI trimer","termid":"GO:0005597"}


id: PBO:0029928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_IMP_binding","termid":"PBO:0029928"}


id: GO:0023067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the lymphatic system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via lymphatic system (obsolete GO:0023067)","synonyms":[{"name":"signal transmission via lymphatic system","type":"exact"}],"termid":"GO:0023067"}


id: PBO:0046882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A7, pseudogene","termid":"PBO:0046882"}


id: GO:0007143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline.","definition_xrefs":["GOC:vw","GOC:dph","GOC:ems","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"female meiotic nuclear division","synonyms":[{"name":"female meiosis","type":"broad"},{"name":"female meiotic division","type":"broad"}],"termid":"GO:0007143"}


id: GO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis","synonyms":[{"name":"activation of receptor mediated endocytosis","type":"narrow"},{"name":"positive regulation of receptor mediated endocytosis","type":"exact"},{"name":"stimulation of receptor mediated endocytosis","type":"narrow"},{"name":"up regulation of receptor mediated endocytosis","type":"exact"},{"name":"up-regulation of receptor mediated endocytosis","type":"exact"},{"name":"upregulation of receptor mediated endocytosis","type":"exact"}],"termid":"GO:0048260"}


id: PBO:0079586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D2","termid":"PBO:0079586"}


id: GO:0070789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of metulae over time, from its formation to the mature structure. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metula development","synonyms":[{"name":"development of primary sterigmata","type":"exact"}],"termid":"GO:0070789"}


id: PBO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster evolving duplicate","termid":"PBO:0009798"}


id: PBO:0080804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xenotropic and polytropic retrovirus receptor 1","termid":"PBO:0080804"}


id: PBO:0075122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 172","termid":"PBO:0075122"}


id: GO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows leptotene during prophase I of meiosis, and during which each chromosome pairs with its homolog; the two become aligned and crossing over may occur.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic prophase I","termid":"GO:0007128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007128"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007128","GO:0008150"],"is_obsolete":false,"name":"zygotene","secondary_identifiers":["Wikipedia:Meiosis#Zygotene","Wikipedia:Zygotene"],"termid":"GO:0000238"}


id: FYPO:0007421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions during G0 phase. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription at telomere","termid":"FYPO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription at telomere during G0","synonyms":[{"name":"increased telomeric transcription during G0","type":"exact"},{"name":"increased transcription at telomere during cell quiescence","type":"exact"},{"name":"increased transcription at telomere during quiescence","type":"exact"},{"name":"increased transcription from telomere during G0","type":"exact"}],"termid":"FYPO:0007421"}


id: GO:0032468
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70691],"is_not":false,"summary":null,"term":"GO:0032468"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the Golgi apparatus of a cell or between the Golgi and its surroundings.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"Golgi calcium ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Golgi calcium ion concentration regulation","type":"exact"},{"name":"calcium ion homeostasis in Golgi","type":"exact"},{"name":"regulation of Golgi calcium ion concentration","type":"exact"},{"name":"regulation of calcium ion concentration in Golgi","type":"exact"}],"termid":"GO:0032468","terms_by_termid":{"GO:0032468":null}}


id: PBO:0071668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 9","termid":"PBO:0071668"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: PBO:0089816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26","termid":"PBO:0089816"}


id: PBO:0011411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_at","termid":"PBO:0011411"}


id: GO:0044516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the activity of a glucagon-like peptide receptor 1 in a second organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of glucagon-like peptide receptor 1 activity in another organism","termid":"GO:0044506"},{"relation_name":"is_a","term_name":"positive regulation of receptor activity in another organism","termid":"GO:0044507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucagon-like peptide receptor 1 activity in another organism","synonyms":[{"name":"positive regulation of glucagon-like peptide receptor 1 activity in other organism","type":"exact"}],"termid":"GO:0044516"}


id: PBO:0065956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 pseudogene 1","termid":"PBO:0065956"}


id: PBO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo-transport protein Ypp1 (predicted)","termid":"PBO:0002572"}


id: PBO:0089971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA-binding protein Vts1","termid":"PBO:0089971"}


id: PBO:0048561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-L-fucose synthase","termid":"PBO:0048561"}


id: PBO:0047738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3A","termid":"PBO:0047738"}


id: GO:0000352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the SL RNA and the pre-mRNA to be joined, as well as all the spliceosomal snRNPs involved in trans leader splicing. Formation of the trans leader spliceosome brings together the quadruple SL/U4/U5/U6 snRNP and the complex of the U2 snRNP with the splice site of the pre-mRNA.","definition_xrefs":["GOC:krc","GOC:mtg_mpo","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA trans splicing, SL addition","termid":"GO:0045291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"trans assembly of SL-containing precatalytic spliceosome","synonyms":[{"name":"trans assembly of spliced leader-containing precatalytic spliceosome","type":"exact"}],"termid":"GO:0000352"}


id: PBO:0031725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination","termid":"PBO:0031725"}


id: PBO:0091342
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BCL2","termid":"PBO:0091342"}


id: PBO:0029077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_vegetative_growth","termid":"PBO:0029077"}


id: PBO:0063609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 1","termid":"PBO:0063609"}


id: PBO:0079428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 11","termid":"PBO:0079428"}


id: PBO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, associated with clathrin coated vesicles (predicted)","termid":"PBO:0016538"}


id: GO:1904743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:BHF","PMID:24415760","GO_REF:0000059","GOC:BHF_telomere","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric DNA binding","synonyms":[{"name":"down regulation of telomere binding","type":"exact"},{"name":"down regulation of telomeric DNA binding","type":"exact"},{"name":"down regulation of telomeric repeat binding","type":"exact"},{"name":"down-regulation of telomere binding","type":"exact"},{"name":"down-regulation of telomeric DNA binding","type":"exact"},{"name":"down-regulation of telomeric repeat binding","type":"exact"},{"name":"downregulation of telomere binding","type":"exact"},{"name":"downregulation of telomeric DNA binding","type":"exact"},{"name":"downregulation of telomeric repeat binding","type":"exact"},{"name":"inhibition of telomere binding","type":"narrow"},{"name":"inhibition of telomeric DNA binding","type":"narrow"},{"name":"inhibition of telomeric repeat binding","type":"narrow"},{"name":"negative regulation of telomere binding","type":"exact"},{"name":"negative regulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904743"}


id: FYPO:0005408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is shorter than normal during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of mitotic S phase","termid":"FYPO:0000615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased duration of mitotic S phase during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased duration of S phase during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic S phase during cellular response to MMS","type":"exact"},{"name":"decreased duration of mitotic S phase during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic S phase during cellular response to methyl methanesulphonate","type":"exact"},{"name":"reduced duration of mitotic S phase during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005408"}


id: FYPO:0007111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule depolymerization","synonyms":[{"name":"abnormal microtubule catastrophe","type":"related"},{"name":"abnormal microtubule depolymerisation","type":"exact"},{"name":"abnormal microtubule shrinkage","type":"related"}],"termid":"FYPO:0007111"}


id: PBO:0082727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rix1 complex and possibly pre-replicative complexes; required for processing of ITS2 sequences from 35S pre-rRNA; component of the pre-60S ribosomal particle with the dynein-related AAA-type ATPase Mdn1p; required for pre-replicative complex (pre-RC) formation and maintenance during DNA replication licensing; relocalizes to the cytosol in response to hypoxia; essential gene","termid":"PBO:0082727"}


id: PR:Q9P3V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.05 gene.","definition_xrefs":["UniProtKB:Q9P3V5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1348.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.05","synonyms":[{"name":"Spom972h-SPBC1348.05","type":"exact"}],"termid":"PR:Q9P3V5"}


id: PBO:0028615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ADP_binding","termid":"PBO:0028615"}


id: FYPO:0007867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle","termid":"FYPO:0007866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"normal protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle pole","type":"exact"},{"name":"normal protein localization to spindle pole during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007867"}


id: GO:2000841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"negatively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"negative regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"negative regulation of DHEA secretion","type":"exact"},{"name":"negative regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000841"}


id: GO:0034482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 2'-O-sulfate. Results in sulfation of glucuronic acid and iduronic acid residues.","definition_xrefs":["PMID:17227754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"chondroitin 2-O-sulfotransferase activity","synonyms":[{"name":"chondroitin 2-O-sulphotransferase activity","type":"exact"},{"name":"chondroitin 2-sulfotransferase activity","type":"exact"}],"termid":"GO:0034482"}


id: FYPO:0001409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on glycerol carbon source","synonyms":[{"name":"normal cell population growth on glycerol carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glycerol carbon source","type":"exact"}],"termid":"FYPO:0001409"}


id: PBO:0053323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 112","termid":"PBO:0053323"}


id: PBO:0027271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0027271"}


id: GO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the relaxation of smooth muscle in a second organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of relaxation of muscle in another organism","termid":"GO:0044616"},{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of relaxation of smooth muscle in another organism","synonyms":[{"name":"modulation of relaxation of smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of smooth muscle in other organism","type":"exact"}],"termid":"GO:0044617"}


id: PBO:0057112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200a","termid":"PBO:0057112"}


id: GO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a heart valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve morphogenesis","synonyms":[{"name":"heart valve remodeling","type":"narrow"},{"name":"heart valve remodelling","type":"narrow"}],"termid":"GO:0003179"}


id: PBO:0072502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 31","termid":"PBO:0072502"}


id: GO:0009426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the central rod of the bacterial-type flagellar basal body that is distal to the cell membrane; spans most of the distance between the inner and outer membranes.","definition_xrefs":["PMID:12624192","PMID:10572114","GOC:cilia","PMID:11133968","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, rod","termid":"GO:0030694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, distal rod","synonyms":[{"name":"flagellar basal body, distal rod","type":"exact"},{"name":"flagellin-based flagellum basal body, distal rod","type":"exact"}],"termid":"GO:0009426"}


id: GO:1904915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF_telomere","GOC:TermGenie","GOC:rph","PMID:26586433","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"positively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"activation of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"activation of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"positive regulation of establishment of macromolecular complex localization to telomere","type":"related"},{"name":"up regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"up regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"up-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"upregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"upregulation of establishment of macromolecular complex localization to telomere","type":"exact"}],"termid":"GO:1904915"}


id: PBO:0053271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A4","termid":"PBO:0053271"}


id: GO:0097066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroid hormone","synonyms":[{"name":"response to thyroid hormone stimulus","type":"exact"}],"termid":"GO:0097066"}


id: PBO:0039894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor gamma","termid":"PBO:0039894"}


id: FYPO:0003525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the addition of actin monomers to a filament occurs to a greater extent than normal at one or both cell tips.","definition_xrefs":["GO:0030041","PMID:24954052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization at cell tip","termid":"FYPO:0003524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased actin filament polymerization at cell tip","synonyms":[{"name":"increased actin filament polymerisation at cell tip","type":"exact"},{"name":"increased actin filament polymerization at cell end","type":"exact"},{"name":"increased actin filament polymerization at cell tip during mitotic cell cycle","type":"related"},{"name":"increased actin filament polymerization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003525"}


id: PBO:0084586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR062W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCR061W","termid":"PBO:0084586"}


id: PBO:0062302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 13 pseudogene","termid":"PBO:0062302"}


id: GO:1900278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proteinase activated receptor activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteinase activated receptor activity","termid":"GO:1900276"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of proteinase activated receptor activity","synonyms":[{"name":"activation of proteinase activated receptor activity","type":"narrow"},{"name":"up regulation of proteinase activated receptor activity","type":"exact"},{"name":"up-regulation of proteinase activated receptor activity","type":"exact"},{"name":"upregulation of proteinase activated receptor activity","type":"exact"}],"termid":"GO:1900278"}


id: SO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA_gene","synonyms":[{"name":"C/D-H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002374"}


id: PBO:0057419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548u","termid":"PBO:0057419"}


id: GO:0060119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an inner ear receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell development","synonyms":[{"name":"inner ear hair cell development","type":"exact"}],"termid":"GO:0060119"}


id: GO:0033284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carboxylic acid(out/in) = ADP + phosphate + carboxylic acid(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled carboxylic acid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent carboxylic acid transporter activity","type":"exact"},{"name":"carboxylic acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0033284"}


id: FYPO:0003071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a single-stranded DNA 5'-3' exodeoxyribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"},{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished single-stranded DNA 5'-3' exodeoxyribonuclease activity","synonyms":[{"name":"single-stranded DNA 5'-3' exodeoxyribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0003071"}


id: PBO:0082390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-isopropylmalate dehydrogenase (IMDH); catalyzes the third step in the leucine biosynthesis pathway; can additionally catalyze the conversion of beta-ethylmalate into alpha-ketovalerate","termid":"PBO:0082390"}


id: GO:0102772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroceramide + 2 Fe(II)-[cytochrome b5] + 2 H(+) + O2 = a phytoceramide + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["GOC:pz","EC:1.14.18.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sphingolipid C4-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-14250","RHEA:55808"],"synonyms":[{"name":"sphingolipid long-chain base 4-hydroxylase activity","type":"related"}],"termid":"GO:0102772"}


id: GO:0033978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + H2O = phosphate + pyruvate.","definition_xrefs":["EC:3.11.1.3","RHEA:16673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-phosphorus bonds","termid":"GO:0016827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphonopyruvate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R08200","MetaCyc:3.11.1.3-RXN"],"synonyms":[{"name":"PPH","type":"related"}],"termid":"GO:0033978"}


id: PBO:0067654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 831, pseudogene","termid":"PBO:0067654"}


id: PBO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVB","termid":"PBO:0060347"}


id: PBO:0071005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 7","termid":"PBO:0071005"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:11299204","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: PBO:0081941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 6","termid":"PBO:0081941"}


id: GO:0003911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA ligase (NAD+) activity","secondary_identifiers":["MetaCyc:DNA-LIGASE-NAD+-RXN"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA ligase (NAD)","type":"related"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming, NMN-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD(+)) activity","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (NAD(+)) activity","type":"related"},{"name":"polynucleotide ligase (NAD)","type":"related"},{"name":"polynucleotide ligase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase activity","type":"related"}],"termid":"GO:0003911"}


id: PBO:0069181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 435, pseudogene","termid":"PBO:0069181"}


id: GO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"part_of","term_name":"cellular response to extracellular stimulus","termid":"GO:0031668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth by extracellular stimulus","synonyms":[{"name":"interpretation of external signals that regulate cell growth","type":"exact"},{"name":"regulation of cell growth by detection of exogenous stimulus","type":"exact"},{"name":"regulation of cell growth by sensing of exogenous stimulus","type":"exact"},{"name":"regulation of growth by exogenous signal","type":"exact"},{"name":"regulation of growth by exogenous stimuli","type":"exact"},{"name":"regulation of growth by exogenous stimulus","type":"exact"},{"name":"regulation of growth by external signal","type":"exact"},{"name":"regulation of growth by external stimuli","type":"exact"},{"name":"regulation of growth by external stimulus","type":"exact"}],"termid":"GO:0001560"}


id: SO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide resides of type VIa or type VIb and where the i+2 residue is cis-proline.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six","synonyms":[{"name":"beta turn type six","type":"exact"},{"name":"cis-proline loop","type":"exact"},{"name":"type VI beta turn","type":"exact"},{"name":"type VI turn","type":"exact"}],"termid":"SO:0001150"}


id: FYPO:0008064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal after phosphate removal.","definition_xrefs":["PMID:36779416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mating efficiency during phosphate starvation","termid":"FYPO:0008064"}


id: PR:P50528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PLK1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase plo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.16","secondary_identifiers":["UniProtKB:P50528"],"synonyms":[{"name":"Spom972h-PLK1","type":"exact"}],"termid":"PR:P50528"}


id: PBO:0091207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln","termid":"PBO:0091207"}


id: MOD:00804
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-beta-glucosylated L-serine.","definition_xrefs":["PubMed:2105311","PubMed:10734111","PubMed:2511201","RESID:AA0397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Glc) serine","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"O-glucosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-glucosylserine","type":"exact"},{"name":"OGlcSer","type":"exact"}],"termid":"MOD:00804"}


id: PBO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 62","termid":"PBO:0048351"}


id: PBO:0052630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 7","termid":"PBO:0052630"}


id: GO:0034330
data:
  {"annotated_genes":["SJAG_04509","SJAG_02566"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099563"},{"annotations":[98000],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098974"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02566":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell junction assembly and maintenance","type":"exact"},{"name":"cell junction biogenesis","type":"related"},{"name":"cell junction organisation","type":"exact"}],"termid":"GO:0034330","terms_by_termid":{"GO:0098974":null,"GO:0099563":null}}


id: PBO:0084247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase; catalyzes the breakdown of IMP to inosine; responsible for production of nicotinamide riboside and nicotinic acid riboside; expression positively regulated by nicotinic acid and glucose availability; does not show similarity to known 5'-nucleotidases from other organisms","termid":"PBO:0084247"}


id: PBO:0067417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 531, pseudogene","termid":"PBO:0067417"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: GO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense-related programmed cell death","termid":"GO:0034053"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host defense-related programmed cell death","synonyms":[{"name":"down regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"down-regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"downregulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"inhibition by symbiont of host defense-related PCD","type":"narrow"},{"name":"inhibition by symbiont of host defense-related programmed cell death","type":"narrow"},{"name":"inhibition of HR","type":"narrow"},{"name":"inhibition of host defense-related PCD","type":"narrow"},{"name":"inhibition of hypersensitive response","type":"narrow"},{"name":"negative regulation by symbiont of host defense-related PCD","type":"exact"},{"name":"negative regulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of plant HR","type":"narrow"},{"name":"negative regulation by symbiont of plant hypersensitive response","type":"narrow"},{"name":"suppression by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"suppression of HR","type":"narrow"}],"termid":"GO:0034054"}


id: PBO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1","termid":"PBO:0051844"}


id: FYPO:0002773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes an abnormal nuclear division after meiosis II is complete.","definition_xrefs":["PomBase:mah","PMID:23628763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"third meiotic division","synonyms":[{"name":"meiosis III","type":"related"},{"name":"meiosis termination defect","type":"exact"},{"name":"third meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002773"}


id: PBO:0059647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 13","termid":"PBO:0059647"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0057110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-2","termid":"PBO:0057110"}


id: GO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cement gland over time, from its formation to the mature structure. The cement gland is a simple mucus-secreting organ positioned at the anterior of amphibious embryos. The cement gland attaches the newly hatched embryo to a support before the hatchling can swim well or feed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cement gland development","termid":"GO:0071570"}


id: PBO:0044963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 7C","termid":"PBO:0044963"}


id: PBO:0079603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F-SCLY readthrough (NMD candidate)","termid":"PBO:0079603"}


id: PBO:0060202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 22","termid":"PBO:0060202"}


id: PBO:0071944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 21","termid":"PBO:0071944"}


id: PBO:0073712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 2","termid":"PBO:0073712"}


id: PBO:0069361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 621, pseudogene","termid":"PBO:0069361"}


id: PBO:0108762
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ageing-Associated LncRNA","termid":"PBO:0108762"}


id: PBO:0053405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 336","termid":"PBO:0053405"}


id: PR:Q8TFH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eos1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein eos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.08","synonyms":[{"name":"Spom972h-eos1","type":"exact"}],"termid":"PR:Q8TFH6"}


id: GO:0031403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lithium ion (Li+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"lithium ion binding","synonyms":[{"name":"Li+ ion binding","type":"exact"}],"termid":"GO:0031403"}


id: PBO:0085402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in remodeling GPI anchors; member of the MBOAT family of putative membrane-bound O-acyltransferases; role in misfolded protein quality control; proposed to be involved in glycerol transport; homolog of the mammalian Hedgehog pathway modulator HHATL; GUP1 has a paralog, GUP2, that arose from the whole genome duplication","termid":"PBO:0085402"}


id: SOFP:anticodon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"anticodon coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","termid":"SOFP:anticodon"}


id: FYPO:0001881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin filaments that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"elongated actin filaments","synonyms":[{"name":"elongated actin filaments during mitotic cell cycle","type":"exact"},{"name":"elongated actin filaments during vegetative growth","type":"exact"},{"name":"elongated microfilaments","type":"related"},{"name":"increased actin filament length during vegetative growth","type":"exact"},{"name":"long actin filaments during vegetative growth","type":"exact"}],"termid":"FYPO:0001881"}


id: GO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of monovalent inorganic cations at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular monovalent inorganic cation homeostasis (obsolete GO:0030004)","termid":"GO:0030004"}


id: GO:0007300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transfer of constituents synthesized in the ovarian nurse cells to the oocyte, through the ring canals, as the egg chamber is growing. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ovarian nurse cell to oocyte transport","synonyms":[{"name":"nurse cell to oocyte transport","type":"broad"}],"termid":"GO:0007300"}


id: GO:1905523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration.","definition_xrefs":["PMID:25749876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"positively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration","synonyms":[{"name":"activation of macrophage migration","type":"narrow"},{"name":"up regulation of macrophage migration","type":"exact"},{"name":"up-regulation of macrophage migration","type":"exact"},{"name":"upregulation of macrophage migration","type":"exact"}],"termid":"GO:1905523"}


id: GO:0061420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of biotin.","definition_xrefs":["GOC:dph","PMID:16533810"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to biotin starvation (obsolete GO:0061420)","termid":"GO:0061420"}


id: PBO:0047812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N1","termid":"PBO:0047812"}


id: PBO:0024836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9 (predicted)","termid":"PBO:0024836"}


id: PR:O42965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.17","synonyms":[{"name":"Spom972h-SPBC19G7.17","type":"exact"}],"termid":"PR:O42965"}


id: PBO:0057951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3674","termid":"PBO:0057951"}


id: PBO:0051418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-14","termid":"PBO:0051418"}


id: PBO:0017739
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome","termid":"PBO:0017739"}


id: PBO:0065750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 2","termid":"PBO:0065750"}


id: PBO:0072773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAA2-SAA4 readthrough","termid":"PBO:0072773"}


id: GO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process (obsolete GO:0042136)","synonyms":[{"name":"neurotransmitter anabolism","type":"exact"},{"name":"neurotransmitter biosynthesis","type":"exact"},{"name":"neurotransmitter biosynthesis and storage","type":"broad"},{"name":"neurotransmitter biosynthetic process and storage","type":"broad"},{"name":"neurotransmitter formation","type":"exact"},{"name":"neurotransmitter synthesis","type":"exact"}],"termid":"GO:0042136"}


id: PBO:0034467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034467"}


id: PBO:0080931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 9","termid":"PBO:0080931"}


id: GO:0010705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs resulting in double strand break formation and repair through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break processing","termid":"GO:0000706"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0140013","GO:0006281","GO:0008150","GO:0006259","GO:0006310","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing involved in reciprocal meiotic recombination","termid":"GO:0010705"}


id: GO:1900195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oocyte maturation.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oocyte maturation","termid":"GO:1900193"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oocyte maturation","synonyms":[{"name":"activation of oocyte maturation","type":"narrow"},{"name":"up regulation of oocyte maturation","type":"exact"},{"name":"up-regulation of oocyte maturation","type":"exact"},{"name":"upregulation of oocyte maturation","type":"exact"}],"termid":"GO:1900195"}


id: PBO:0071322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 6","termid":"PBO:0071322"}


id: PATO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of unique homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monoploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoploid","termid":"PATO:0001376"}


id: PBO:0055101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2519","termid":"PBO:0055101"}


id: PBO:0012034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp5 (predicted)","termid":"PBO:0012034"}


id: GO:0042742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to bacterium","secondary_identifiers":["GO:0009816","GO:0042830"],"synonyms":[{"name":"antibacterial peptide activity","type":"related"},{"name":"defence response to bacteria","type":"exact"},{"name":"defence response to bacterium","type":"exact"},{"name":"defense response to bacteria","type":"exact"},{"name":"defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic bacteria","type":"narrow"},{"name":"resistance response to pathogenic bacterium","type":"narrow"}],"termid":"GO:0042742"}


id: GO:0141027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20688909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cytoskeleton","termid":"GO:0052039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton","synonyms":[{"name":"disruption by symbiont of actin cytoskeleton","type":"related"},{"name":"modification by symbiont of host actin cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host actin cytoskeleton","type":"exact"}],"termid":"GO:0141027"}


id: PBO:0074844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36A","termid":"PBO:0074844"}


id: GO:0140874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paraherquonin, a meroterpenoid with a unique, highly congested hexacyclic molecular architecture.","definition_xrefs":["PMID:27602587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"paraherquonin biosynthetic process","synonyms":[{"name":"paraherquonin anabolism","type":"exact"},{"name":"paraherquonin biosynthesis","type":"exact"},{"name":"paraherquonin formation","type":"exact"},{"name":"paraherquonin synthesis","type":"exact"}],"termid":"GO:0140874"}


id: GO:0015989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of protons against an electrochemical gradient, using energy from light.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete light-driven proton transport (obsolete GO:0015989)","termid":"GO:0015989"}


id: PBO:0070981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 5","termid":"PBO:0070981"}


id: PBO:0034174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoeology_relationship_with","termid":"PBO:0034174"}


id: PBO:0029677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_morphology","termid":"PBO:0029677"}


id: GO:1903424
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The process in which fluoride is transported across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:24173035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"fluoride transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fluoride membrane transport","type":"exact"},{"name":"transmembrane fluoride transport","type":"exact"}],"termid":"GO:1903424","terms_by_termid":{"GO:0140116":null}}


id: PATO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000168 relative time (obsolete PATO:0000168)","termid":"PATO:0000168"}


id: PBO:0041710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 3","termid":"PBO:0041710"}


id: GO:0140712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a Frizzled Nuclear Import pathway.","definition_xrefs":["PMID:22510459","PMID:22579286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Frizzled Nuclear Import pathway","termid":"GO:0140710"},{"relation_name":"is_a","term_name":"negative regulation of non-canonical Wnt signaling pathway","termid":"GO:2000051"},{"relation_name":"negatively_regulates","term_name":"Frizzled Nuclear Import pathway","termid":"GO:0140709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Frizzled Nuclear Import pathway","synonyms":[{"name":"negative regulation of FNI","type":"broad"},{"name":"negative regulation of Frizzled Nuclear Import Wnt Pathway","type":"exact"}],"termid":"GO:0140712"}


id: PBO:0057002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 95","termid":"PBO:0057002"}


id: PBO:0045390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 1","termid":"PBO:0045390"}


id: PBO:0058777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7111","termid":"PBO:0058777"}


id: RO:HOM0000030
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Heterochronous homology that is produced by a maturation of individuals of a species past adulthood, which take on hitherto unseen traits.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_heterochronous_homology_relationship_with","termid":"RO:HOM0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_peramorphosis_relationship_with","termid":"RO:HOM0000030"}


id: PBO:0089327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap95","termid":"PBO:0089327"}


id: SO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes some but not all loss of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_partial_loss_of_function","synonyms":[{"name":"polypeptide partial loss of function","type":"exact"}],"termid":"SO:0001561"}


id: GO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075116)","synonyms":[{"name":"activation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"positive regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"},{"name":"promotion by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"stimulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"upregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"}],"termid":"GO:0075116"}


id: PBO:0085127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein found in preribosomal complexes; contains an RNA recognition motif (RRM); relative distribution to the nucleolus increases upon DNA replication stress","termid":"PBO:0085127"}


id: PBO:0085805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; dgr1 null mutant is resistant to 2-deoxy-D-glucose","termid":"PBO:0085805"}


id: GO:0033311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate phytyl diphosphate.","definition_xrefs":["MetaCyc:PWY-5086","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via phytyl diphosphate","synonyms":[{"name":"chlorophyll a anabolism via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthesis via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthetic process via phytyl-PP","type":"exact"},{"name":"chlorophyll a formation via phytyl chlorophyll a formation via phytyl-PP","type":"exact"},{"name":"chlorophyll a synthesis via phytyl diphosphate","type":"exact"}],"termid":"GO:0033311"}


id: GO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein-1 gamma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 gamma production","termid":"GO:0071607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"regulation of CCL9 production","type":"exact"},{"name":"regulation of MIP-1g production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071646"}


id: PBO:0043137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 5","termid":"PBO:0043137"}


id: GO:0019458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine, via the intermediate 2-oxobutanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006790","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"methionine catabolic process via 2-oxobutanoate","secondary_identifiers":["MetaCyc:PWY-701"],"synonyms":[{"name":"methionine breakdown via 2-oxobutanoate","type":"exact"},{"name":"methionine degradation via 2-oxobutanoate","type":"exact"}],"termid":"GO:0019458"}


id: GO:0045147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"regulation of response to acetate","termid":"GO:1901457"},{"relation_name":"regulates","term_name":"initiation of acetate catabolic process by acetate","termid":"GO:0045146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of initiation of acetate catabolic process by acetate","synonyms":[{"name":"regulation of initiation of acetate breakdown by acetate","type":"exact"},{"name":"regulation of initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045147"}


id: PBO:0079593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D4 (putative)","termid":"PBO:0079593"}


id: GO:0008391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the incorporation of one atom from molecular oxygen into arachidonic acid and the reduction of the other atom of oxygen to water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arachidonic acid monooxygenase activity","synonyms":[{"name":"cytochrome P450 CYP2B19","type":"narrow"}],"termid":"GO:0008391"}


id: PBO:0066634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 2","termid":"PBO:0066634"}


id: PBO:0068373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 166","termid":"PBO:0068373"}


id: PBO:0043185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrogenesis-associated transcript","termid":"PBO:0043185"}


id: PBO:0091561
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae LIA1","termid":"PBO:0091561"}


id: SO:0000944
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that results from recombination between attP_site and attB_site, composed of the 5' portion of attB_site and the 3' portion of attP_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attL_site","synonyms":[{"name":"attBP'","type":"related"},{"name":"attL site","type":"related"}],"termid":"SO:0000944"}


id: GO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group. They are the precursors of both gangliosides and globosides.","definition_xrefs":["ISBN:0198506732","ISBN:0471586501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"lactosylceramide metabolic process","termid":"GO:0046478"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lactosylceramide biosynthetic process","synonyms":[{"name":"lactosylceramide anabolism","type":"exact"},{"name":"lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide formation","type":"exact"},{"name":"lactosylceramide synthesis","type":"exact"}],"termid":"GO:0001572"}


id: GO:0160143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2819) in 21S rRNA = pseudouridine(2819) in 21S rRNA.","definition_xrefs":["RHEA:42556","EC:5.4.99.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"21S rRNA pseudouridine(2819) synthase activity","termid":"GO:0160143"}


id: PATO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"young","termid":"PATO:0000309"}


id: FYECO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Nitrogen was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000062 absence of nitrogen (obsolete FYECO:0000062)","termid":"FYECO:0000062"}


id: PBO:0087670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the INO80 chromatin remodeling complex; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087670"}


id: GO:0004313
data:
  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96962],"is_not":false,"summary":null,"term":"GO:0004313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + [acyl-carrier protein] = CoA + acetyl-[acyl-carrier protein].","definition_xrefs":["RHEA:41788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.38","MetaCyc:ACP-S-ACETYLTRANSFER-RXN"],"synonyms":[{"name":"ACAT activity","type":"broad"},{"name":"ACP S-acetyltransferase activity","type":"exact"},{"name":"ACP acetyltransferase activity","type":"related"},{"name":"ACPacetyltransferase activity","type":"related"},{"name":"[acyl-carrier protein] S-acetyltransferase activity","type":"exact"},{"name":"acetyl coenzyme A-acyl-carrier-protein transacylase activity","type":"related"},{"name":"acetyl-CoA:acyl-carrier-protein S-acetyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-acetyltransferase activity","type":"related"},{"name":"acyl-carrier-protein acetyltransferase activity","type":"related"},{"name":"acyl-carrier-proteinacetyltransferase activity","type":"related"}],"termid":"GO:0004313","terms_by_termid":{"GO:0004313":null}}


id: PBO:0058727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6855","termid":"PBO:0058727"}


id: PBO:0028650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_precursor_level","termid":"PBO:0028650"}


id: PBO:0076290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin III","termid":"PBO:0076290"}


id: RO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'is substance that treats'","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_treated_by_substance","termid":"RO:0002302"}


id: PBO:0075858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 6, pseudogene","termid":"PBO:0075858"}


id: PBO:0046238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 32","termid":"PBO:0046238"}


id: GO:0106223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-(R)-germacrene A + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = germacra-1(10),4,11(13)-trien-12-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:30303","PMID:20351109","PMID:11299372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"germacrene A hydroxylase activity","secondary_identifiers":["GO:0102260","EC:1.14.14.95","MetaCyc:RXN-19749"],"synonyms":[{"name":"germacrene A alcohol dehydrogenase activity","type":"related"}],"termid":"GO:0106223"}


id: FYPO:0000209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"abnormal attachment of spindle microtubules to meiosis I kinetochore","type":"exact"},{"name":"abnormal kinetochore mono-orientation at meiosis I","type":"exact"},{"name":"abnormal kinetochore orientation at meiosis I","type":"exact"},{"name":"abnormal sister kinetochore mono-orientation","type":"exact"}],"termid":"FYPO:0000209"}


id: GO:0072015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular visceral epithelial cell over time, from its formation to the mature structure. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"podocyte differentiation","termid":"GO:0072112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte development","synonyms":[{"name":"glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:0072015"}


id: PBO:0028320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028320"}


id: PBO:0068398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF216 intronic transcript 1","termid":"PBO:0068398"}


id: SO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA_gene","termid":"SO:0002366"}


id: PR:P36579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.18c","synonyms":[{"name":"Spom972h-arf1","type":"exact"}],"termid":"PR:P36579"}


id: PR:Q9P7X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial-processing peptidase subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF58","OMA:SCHPO03098","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial-processing peptidase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.15c","secondary_identifiers":["UniProtKB:Q9P7X1"],"synonyms":[{"name":"PEP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PMPCB","type":"exact"},{"name":"beta-MPP (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X1"}


id: GO:0048499
data:
  {"annotated_genes":["SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84757],"is_not":false,"summary":null,"term":"GO:0048499"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle.","definition_xrefs":["PMID:10620806","GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SLMV biogenesis","type":"narrow"},{"name":"synaptic vesicle membrane organisation","type":"exact"},{"name":"synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:0048499","terms_by_termid":{"GO:0048499":null}}


id: PBO:0083909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone oxidoreductase; induced by oxidative stress in a Yap1p dependent manner; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress; PST2 has a paralog, RFS1, that arose from the whole genome duplication","termid":"PBO:0083909"}


id: GO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"mannan catabolic process","synonyms":[{"name":"mannan breakdown","type":"exact"},{"name":"mannan catabolism","type":"exact"},{"name":"mannan degradation","type":"exact"}],"termid":"GO:0046355"}


id: PBO:0087443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit H of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; serves as an activator or a structural stabilizer of the V-ATPase; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087443"}


id: GO:2000455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"regulates","term_name":"T-helper 17 cell extravasation","termid":"GO:0035699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 cell extravasation","termid":"GO:2000455"}


id: PBO:0072379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27a pseudogene 5","termid":"PBO:0072379"}


id: FYPO:0001765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA modification, the covalent alteration of one or more nucleotides within a tRNA molecule, is abnormal.","definition_xrefs":["PomBase:mah","GO:0006400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal tRNA modification","synonyms":[{"name":"abnormal tRNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0001765"}


id: PBO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 22, pseudogene","termid":"PBO:0042666"}


id: PBO:0055613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3052","termid":"PBO:0055613"}


id: PR:O13712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- man1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 61 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.05c","synonyms":[{"name":"Spom972h-man1","type":"exact"}],"termid":"PR:O13712"}


id: PBO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin pho85 family (predicted)","termid":"PBO:0004449"}


id: PBO:0090815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP6 regulatory subunit Ekc1","termid":"PBO:0090815"}


id: GO:1990319
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XX) chains.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XX trimer","termid":"GO:1990319"}


id: PBO:0077857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 2","termid":"PBO:0077857"}


id: GO:1990725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cord factor, an M. tuberculosis cell wall glycolipid, and transmitting a signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","PMID:23602766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cord factor receptor activity","secondary_identifiers":["Wikipedia:Cord_factor"],"synonyms":[{"name":"TMD receptor activity","type":"exact"},{"name":"trehalose 6,6'-dimycolate receptor activity","type":"exact"}],"termid":"GO:1990725"}


id: FYPO:0001874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body","synonyms":[{"name":"abnormal asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"abnormal occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001874"}


id: PBO:0083154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF SSZ1/YHR064C","termid":"PBO:0083154"}


id: GO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4-bisphosphate + H2O = 1D-myo-inositol 3-phosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4-bisphosphate 4-phosphatase activity","secondary_identifiers":["RHEA:43388","Reactome:R-HSA-1855202"],"termid":"GO:0052828"}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: PBO:0080802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin for tRNA","termid":"PBO:0080802"}


id: MOD:01616
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues and adds three sulfur atoms to form trithiocystine.","definition_xrefs":["RESID:AA0513","PubMed:19438211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysulfide crosslinked residues","termid":"MOD:01620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trithiocystine","synonyms":[{"name":"(2R,2'R)-3,3'-pentasulfane-1,5-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-pentathiobisalanine","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)pentasulfide","type":"exact"},{"name":"trithiocystine","type":"exact"}],"termid":"MOD:01616"}


id: GO:0006207
data:
  {"annotated_genes":["SJAG_03164","SJAG_00412","SJAG_00197","SJAG_00694","SJAG_00392","SJAG_05024","SJAG_00444","SJAG_00964","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70150,71196,71503,71710,72992,73596,83598,107578,112236],"is_not":false,"summary":null,"term":"GO:0006207"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.","definition_xrefs":["ISBN:0716720094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"'de novo' pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' pyrimidine base anabolism","type":"exact"},{"name":"'de novo' pyrimidine base biosynthesis","type":"exact"},{"name":"'de novo' pyrimidine base biosynthetic process","type":"exact"},{"name":"'de novo' pyrimidine base formation","type":"exact"},{"name":"'de novo' pyrimidine base synthesis","type":"exact"}],"termid":"GO:0006207","terms_by_termid":{"GO:0006207":null}}


id: PBO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_transport_during_meiosis","termid":"PBO:0034576"}


id: GO:0000271
data:
  {"annotated_genes":["SJAG_02446","SJAG_04878","SJAG_00218","SJAG_01453","SJAG_04509","SJAG_04483","SJAG_05285","SJAG_01209","SJAG_04462","SJAG_03587","SJAG_01288","SJAG_00610","SJAG_04073","SJAG_02278","SJAG_04771","SJAG_00963","SJAG_03057","SJAG_04184","SJAG_01028","SJAG_01376","SJAG_03705","SJAG_02222","SJAG_04236","SJAG_03123","SJAG_01290","SJAG_04666","SJAG_04469","SJAG_00183","SJAG_04668","SJAG_00424","SJAG_01426","SJAG_02590","SJAG_00876","SJAG_01835","SJAG_01787","SJAG_00771","SJAG_01963","SJAG_02916"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113247,98717,74514,75757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[91333,78260,96834,89362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[90517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[70610,71418,72814,77564,72987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[109765,87517,87507,102473,83883,105758,104194,112503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98909,105051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[105341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[77600,102771,76186],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[83315,88383],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83707],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[88369,99120,86675,101690,114620],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[85311,88389,99122,91009],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04469":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"polysaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycan biosynthesis","type":"exact"},{"name":"glycan biosynthetic process","type":"exact"},{"name":"polysaccharide anabolism","type":"exact"},{"name":"polysaccharide biosynthesis","type":"exact"},{"name":"polysaccharide formation","type":"exact"},{"name":"polysaccharide synthesis","type":"exact"}],"termid":"GO:0000271","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a parasitic plant that act to protect an organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to parasitic plant","termid":"GO:0002241"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to parasitic plant","termid":"GO:0002242"}


id: FYPO:0003047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRR boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRR","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRR during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRR during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRR","type":"exact"}],"termid":"FYPO:0003047"}


id: PBO:0042071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC140 long non-coding RNA","termid":"PBO:0042071"}


id: PBO:0005575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf15","termid":"PBO:0005575"}


id: GO:0097067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"}


id: PBO:0051691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 antisense RNA 1","termid":"PBO:0051691"}


id: PBO:0056116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 1","termid":"PBO:0056116"}


id: PBO:0071490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 31","termid":"PBO:0071490"}


id: PBO:0084008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen debranching enzyme; contains glucanotranferase and alpha-1,6-amyloglucosidase activities; required for glycogen degradation; phosphorylated in mitochondria; activity is inhibited by Igd1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0084008"}


id: PATO:0002358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elongated raised margin or border.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ridged","synonyms":[{"name":"ridge-like","type":"exact"}],"termid":"PATO:0002358"}


id: GO:0034630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a RITS complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RITS complex localization","synonyms":[{"name":"RITS complex localisation","type":"exact"},{"name":"establishment and maintenance of RITS complex localization","type":"exact"}],"termid":"GO:0034630"}


id: GO:0006879
data:
  {"annotated_genes":["SJAG_01694","SJAG_04675","SJAG_04031","SJAG_02457","SJAG_00792","SJAG_00532","SJAG_02834","SJAG_04867","SJAG_00802","SJAG_04032","SJAG_04607","SJAG_04677","SJAG_02735","SJAG_03862","SJAG_04743","SJAG_02474","SJAG_01004","SJAG_00822"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71151,73750,74274,74398,76952,77041,88259,90111,100583,110508],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[100100,90156,88415,90148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[73194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[88416,88412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[109362,88417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[107276,107275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of iron ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00532":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_01004":null,"SJAG_01694":null,"SJAG_02457":null,"SJAG_02474":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_03862":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04607":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular iron ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular iron ion homeostasis","type":"exact"},{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0006879","terms_by_termid":{"GO:0006879":null,"GO:0006880":null,"GO:0010106":null,"GO:0033214":null,"GO:0033215":null,"GO:0098711":null}}


id: PBO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_import","termid":"PBO:0030490"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"paspalinine synthase activity","secondary_identifiers":["MetaCyc:RXN-15738"],"termid":"GO:0102640"}


id: FYPO:0001530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal GTPase activity","termid":"FYPO:0001530"}


id: FYPO:0005248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tellurite (TeO3(2-)) ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to tellurite","synonyms":[{"name":"resistance to tellurite during mitotic cell cycle","type":"related"},{"name":"resistance to tellurite during vegetative growth","type":"exact"},{"name":"resistance to tellurite ions","type":"exact"},{"name":"resistant to tellurite","type":"exact"}],"termid":"FYPO:0005248"}


id: GO:0033321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homomethionine, a non-protein amino acid synthesized from methionine via chain elongation.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homomethionine metabolic process","synonyms":[{"name":"homomethionine metabolism","type":"exact"}],"termid":"GO:0033321"}


id: PBO:0073788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 8","termid":"PBO:0073788"}


id: PBO:0089744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1","termid":"PBO:0089744"}


id: PBO:0062381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 4","termid":"PBO:0062381"}


id: PBO:0066471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske (Fe-S) domain containing pseudogene 1","termid":"PBO:0066471"}


id: GO:1903650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["PMID:25049409","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytoplasmic transport (obsolete GO:1903650)","synonyms":[{"name":"down regulation of cytoplasmic streaming","type":"narrow"},{"name":"down regulation of cytoplasmic transport","type":"exact"},{"name":"down-regulation of cytoplasmic streaming","type":"narrow"},{"name":"down-regulation of cytoplasmic transport","type":"exact"},{"name":"downregulation of cytoplasmic streaming","type":"narrow"},{"name":"downregulation of cytoplasmic transport","type":"exact"},{"name":"inhibition of cytoplasmic streaming","type":"narrow"},{"name":"inhibition of cytoplasmic transport","type":"narrow"},{"name":"negative regulation of cytoplasmic streaming","type":"narrow"}],"termid":"GO:1903650"}


id: PR:Q9US03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp2 gene.","definition_xrefs":["UniProtKB:Q9US03","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.10","synonyms":[{"name":"Spom972h-klp2","type":"exact"}],"termid":"PR:Q9US03"}


id: PBO:0058850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8079","termid":"PBO:0058850"}


id: PBO:0064857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 15A","termid":"PBO:0064857"}


id: GO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast development","termid":"GO:0048627"}


id: GO:0043739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolyzes mismatched double-stranded DNA and polynucleotides, releasing free uracil and leaving an apyrimidinic (AP) site.","definition_xrefs":["PMID:24739389","EC:3.2.2.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil DNA N-glycosylase activity","termid":"GO:0004844"},{"relation_name":"is_a","term_name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","termid":"GO:0008263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140097","GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"G/U mismatch-specific uracil-DNA glycosylase activity","synonyms":[{"name":"GU mismatch-specific uracil-DNA glycosylase activity","type":"exact"},{"name":"MUG","type":"exact"},{"name":"uracil mismatch repair protein","type":"broad"}],"termid":"GO:0043739"}


id: GO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of (2R,6R)-lanthionine, sn-(2S,6R)-lanthionine or (2S,3S,6R)-3-methyl-lanthionine, forming an intra-polypeptide cross-link between peptidyl-cysteine, and peptidyl-serine or peptidyl-threonine; dehydration of the serine or threonine residue to the alpha,beta-unsaturated amino acid is the first step; a bond then forms between the ethylene (ethene) group thus formed and the sulfur atom of a cysteine, with the inversion of the configuration of the alpha carbon of the serine or threonine occurring during the process.","definition_xrefs":["RESID:AA0112","RESID:AA0110","RESID:AA0111","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via lanthionine or 3-methyl-lanthionine (obsolete GO:0018081)","synonyms":[{"name":"peptide cross-linking via the thioethers lanthionine or 3-methyl-lanthionine","type":"exact"},{"name":"peptide cross-linking via the thiolethers lanthionine or 3-methyl-lanthionine","type":"exact"}],"termid":"GO:0018081"}


id: GO:0032454
data:
  {"annotated_genes":["SJAG_02401","SJAG_03664","SJAG_03041","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70472,114468],"is_not":false,"summary":null,"term":"GO:0032454"},{"annotations":[90130,99516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 9 of the histone H3 protein.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03041":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0032452","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K9 demethylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-997263","Reactome:R-HSA-9011949","Reactome:R-HSA-9011985"],"synonyms":[{"name":"histone H3-K49 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032454","terms_by_termid":{"GO:0032454":null,"GO:0140683":null}}


id: GO:0061058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the peptidoglycan recognition protein signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"peptidoglycan recognition protein signaling pathway","termid":"GO:0061057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"regulation of peptidoglycan recognition protein signalling pathway","type":"exact"}],"termid":"GO:0061058"}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:15358192","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: GO:0034757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of iron ion transport","synonyms":[{"name":"down regulation of iron ion transport","type":"exact"},{"name":"down-regulation of iron ion transport","type":"exact"},{"name":"downregulation of iron ion transport","type":"exact"},{"name":"inhibition of iron ion transport","type":"narrow"},{"name":"negative regulation of iron transport","type":"exact"}],"termid":"GO:0034757"}


id: GO:1903166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polycyclic arene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mr","PMID:10998501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polycyclic arene","termid":"GO:1903166"}


id: PBO:0063961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 2","termid":"PBO:0063961"}


id: GO:0016419
data:
  {"annotated_genes":["SJAG_04107","SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70237,96963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a sulfur atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.1.39"],"termid":"GO:0016419","terms_by_termid":{"GO:0004314":null}}


id: GO:0010854
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"adenylate cyclase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010854","terms_by_termid":{"GO:0010856":null}}


id: GO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is increased in the presence of cGMP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"cGMP-stimulated cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004118"}


id: PBO:0077186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 9","termid":"PBO:0077186"}


id: PBO:0027961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0027961"}


id: GO:0003688
data:
  {"annotated_genes":["SJAG_01267","SJAG_03216","SJAG_02348","SJAG_03451","SJAG_03927","SJAG_02800","SJAG_05301","SJAG_02394","SJAG_05239","SJAG_01762"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93467,93575,101833,104262,104480,106694,107904,108166,109783,111766],"is_not":false,"summary":null,"term":"GO:0003688"}]},"cv_name":"molecular_function","definition":"Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03216":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"DNA replication origin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ARS binding","type":"narrow"}],"termid":"GO:0003688","terms_by_termid":{"GO:0003688":null}}


id: PR:O42979
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHO85 cyclin-like protein psl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.10","synonyms":[{"name":"Spom972h-psl1","type":"exact"}],"termid":"PR:O42979"}


id: GO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Conversion of vitamin D3 from its largely inactive form (calciol, also called cholecalciferol) into a hormonally active form (calcitriol). Conversion requires 25-hydroxylation of calciol in the liver to form calcidiol, and subsequent 1,alpha-hydroxylation of calcidiol in the kidney to form calcitriol.","definition_xrefs":["GOC:rl","PMID:20511049","PMID:17426122","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"calcitriol biosynthetic process from calciol","synonyms":[{"name":"1alpha,25(OH)2D3 biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxycholecalciferol biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxyvitamin D3 biosynthesis","type":"broad"},{"name":"calcitriol biosynthesis from calciol","type":"exact"},{"name":"vitamin D3 activation","type":"exact"}],"termid":"GO:0036378"}


id: FYPO:0003569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the cytoplasm. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PMID:24963130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in cytoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003569"}


id: GO:1902969
data:
  {"annotated_genes":["SJAG_04816","SJAG_02690","SJAG_00399","SJAG_03780","SJAG_02172","SJAG_04877","SJAG_00814","SJAG_02198","SJAG_02992","SJAG_00400","SJAG_01698","SJAG_00311","SJAG_05180","SJAG_04341","SJAG_03495","SJAG_03927","SJAG_01221","SJAG_03855","SJAG_03695","SJAG_00884","SJAG_02079","SJAG_02199","SJAG_04210","SJAG_02348","SJAG_01076","SJAG_00728","SJAG_00696","SJAG_02607","SJAG_02394","SJAG_01210","SJAG_01354","SJAG_00618","SJAG_04671","SJAG_02908","SJAG_02294","SJAG_04994","SJAG_04272","SJAG_01410","SJAG_05239","SJAG_01832","SJAG_02822","SJAG_01823","SJAG_00272","SJAG_05301","SJAG_02667","SJAG_00857","SJAG_02039","SJAG_05232","SJAG_00327","SJAG_03451","SJAG_05197","SJAG_01374","SJAG_03160","SJAG_04190","SJAG_04879","SJAG_00863","SJAG_03898","SJAG_02162","SJAG_02800","SJAG_00198","SJAG_04150","SJAG_04995","SJAG_03843","SJAG_00573","SJAG_01068","SJAG_02627","SJAG_04183","SJAG_00998","SJAG_03722","SJAG_01762","SJAG_02074","SJAG_01010","SJAG_01624","SJAG_00874","SJAG_02098","SJAG_02182","SJAG_01267","SJAG_00729","SJAG_03840","SJAG_06022","SJAG_02439","SJAG_03048","SJAG_01884","SJAG_00536","SJAG_02818","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85455,94274,95475,100752,106031,108068,109395],"is_not":false,"summary":null,"term":"GO:1902969"},{"annotations":[91134,109075,70442,103644,110175,108821,111933,112061,106408,111760],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[102807,110090,77933,70141,103646,99236,78047,74578,76018,93466,71849,107038,103749,108165,111935,74053,95607,72547,87896,77554,109758,112063,104479,86337,71894,108438,73218,111762,93572,110177],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[99101,105552,91319,101268,100554,114888],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[103373,90011,103750,91353,100555,91320,101269,85443],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[105567,108284],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[107039,86338,71893],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[88093],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902979"},{"annotations":[107040,99612],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[95251,104150,91149,95133,90893,104174,106013,85030,86860,105523,109078,94408,92278,113513,92118],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[113560],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[98631,93923,105333],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[96824,96861,97742,100478,88621,72126,91136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[108580,113978,99613],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[98640],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[95552],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"},{"annotations":[109079,100479,84125,99227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"},{"annotations":[70478,114041,112183,61678,112952,74577],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902981"}]},"cv_name":"biological_process","definition":"Any nuclear DNA replication that is involved in a mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication","termid":"GO:0033260"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":86,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00311":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00400":null,"SJAG_00536":null,"SJAG_00573":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00728":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00998":null,"SJAG_01010":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01210":null,"SJAG_01221":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01624":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_01832":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02822":null,"SJAG_02908":null,"SJAG_02992":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03695":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03840":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05180":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"mitotic cell cycle DNA replication","type":"exact"},{"name":"mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902969","terms_by_termid":{"GO:1902969":null,"GO:1902975":null,"GO:1902977":null,"GO:1902979":null,"GO:1902981":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1990426":null,"GO:1990505":null}}


id: GO:0060258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process in which a multicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth","termid":"GO:0010570"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"negatively_regulates","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth","termid":"GO:0060258"}


id: GO:0008928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate + GDP + H+ = GDP-alpha-D-mannose + phosphate.","definition_xrefs":["RHEA:12905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"mannose-1-phosphate guanylyltransferase (GDP) activity","secondary_identifiers":["KEGG_REACTION:R00883","MetaCyc:MANNPGUANYLTRANGDP-RXN","EC:2.7.7.22"],"synonyms":[{"name":"GDP mannose phosphorylase activity","type":"related"},{"name":"GDP-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"GDP-mannose phosphorylase activity","type":"related"},{"name":"GDP-mannose pyrophosphorylase activity","type":"related"},{"name":"GDP:D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GDP:alpha-D-mannose-1-phosphate guanylyltransferase activity","type":"related"},{"name":"GDP:mannose-1-phosphate guanylyltransferase activity","type":"exact"},{"name":"guanosine diphosphate-mannose 1-phosphate guanylyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose phosphorylase activity","type":"related"},{"name":"mannose 1-phosphate (guanosine diphosphate) guanylyltransferase activity","type":"related"},{"name":"mannose 1-phosphate guanylyltransferase activity","type":"related"}],"termid":"GO:0008928"}


id: PBO:0088261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruA family tRNA/ U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0088261"}


id: GO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, by which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic digestive tract morphogenesis","synonyms":[{"name":"post-embryonic gut morphogenesis","type":"broad"}],"termid":"GO:0048621"}


id: GO:0110055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["PMID:15743909","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament annealing","termid":"GO:0110054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"negative regulation of actin filament annealing","termid":"GO:0110055"}


id: GO:0047441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-5-dehydro-2-deoxy-D-gluconate = 3-oxopropanoate + glycerone phosphate.","definition_xrefs":["EC:4.1.2.29","RHEA:13177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"5-dehydro-2-deoxyphosphogluconate aldolase activity","secondary_identifiers":["KEGG_REACTION:R05378","MetaCyc:4.1.2.29-RXN"],"synonyms":[{"name":"5-dehydro-2-deoxy-D-gluconate-6-phosphate malonate-semialdehyde-lyase (pyruvate-forming)","type":"related"},{"name":"5-dehydro-2-deoxy-D-gluconate-6-phosphate malonate-semialdehyde-lyase activity","type":"related"},{"name":"phospho-5-dehydro-2-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-5-keto-2-deoxygluconate aldolase activity","type":"related"}],"termid":"GO:0047441"}


id: GO:0003065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream or released from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"},{"relation_name":"is_a","term_name":"positive regulation of heart rate","termid":"GO:0010460"},{"relation_name":"part_of","term_name":"positive regulation of heart rate by epinephrine-norepinephrine","termid":"GO:0001996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by epinephrine","synonyms":[{"name":"adrenaline cardiac chronotropy","type":"exact"},{"name":"adrenaline regulation of the rate of heart muscle contraction","type":"exact"},{"name":"epinephrine cardiac chronotropy","type":"exact"},{"name":"positive regulation of heart contraction rate by epinephrine","type":"related"},{"name":"positive regulation of heart rate by adrenaline","type":"related"}],"termid":"GO:0003065"}


id: PBO:0011966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal calcium sensor related protein Ncs1","termid":"PBO:0011966"}


id: GO:2001098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a tetrasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tetrasaccharide transport","termid":"GO:2001098"}


id: GO:0045306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibitor of the establishment of competence for transformation activity (obsolete GO:0045306)","synonyms":[{"name":"inhibitor of the establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045306"}


id: PBO:0044845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130D (pseudogene)","termid":"PBO:0044845"}


id: PBO:0005401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12 (predicted)","termid":"PBO:0005401"}


id: SO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tyrosine anticodon, and a 3' tyrosine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tyrosine_tRNA_primary_transcript","termid":"SO:0000229"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl_tRNA","synonyms":[{"name":"tyrosyl tRNA","type":"exact"},{"name":"tyrosyl-transfer RNA","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000272"}


id: FYPO:0003136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more plasma membrane than normal. Excess plasma membrane may appear as bubble-like structures inside the cell, and may be concentrated in the mating projection during conjugation.","definition_xrefs":["PMID:19627505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"excess plasma membrane present","synonyms":[{"name":"excess mating projection membrane present","type":"narrow"},{"name":"excess plasma membrane present during mitotic cell cycle","type":"related"},{"name":"excess plasma membrane present during vegetative growth","type":"exact"},{"name":"internal membrane bubbles present","type":"related"}],"termid":"FYPO:0003136"}


id: PBO:0067306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 392, pseudogene","termid":"PBO:0067306"}


id: PBO:0049558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 20, pseudogene","termid":"PBO:0049558"}


id: GO:0014726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"negative regulation of muscle organ development","termid":"GO:0048635"},{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle tissue development","termid":"GO:0048642"},{"relation_name":"negatively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extraocular skeletal muscle development","termid":"GO:0014726"}


id: FYPO:0008067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitochondrion is abnormally hyperconstricted at the fission sites and has a chained \\\"beads-on-a-string\\\" appearance.","definition_xrefs":["PMID:37540145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondria fused","termid":"FYPO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"constricted chained mitochondrion","termid":"FYPO:0008067"}


id: PBO:0091721
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure update","termid":"PBO:0091721"}


id: PBO:0056142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor family member 3","termid":"PBO:0056142"}


id: PBO:0063256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 2","termid":"PBO:0063256"}


id: GO:0071120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to the cell surface antigen CD47.","definition_xrefs":["PMID:15292185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha4-beta1 integrin-CD47 complex","synonyms":[{"name":"ITGA4-ITGB1-CB47 complex","type":"narrow"}],"termid":"GO:0071120"}


id: PBO:0051058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-10","termid":"PBO:0051058"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: GO:0014034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a neural crest cell.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate commitment","termid":"GO:0048865"},{"relation_name":"part_of","term_name":"neural crest formation","termid":"GO:0014029"},{"relation_name":"part_of","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate commitment","termid":"GO:0014034"}


id: FYPO:0001065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of threonine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal threonine import","synonyms":[{"name":"abnormal L-threonine import","type":"exact"},{"name":"abnormal L-threonine import across plasma membrane","type":"exact"},{"name":"abnormal threonine import during mitotic cell cycle","type":"related"},{"name":"abnormal threonine import during vegetative growth","type":"exact"},{"name":"abnormal threonine import into cell","type":"exact"},{"name":"abnormal threonine uptake","type":"exact"}],"termid":"FYPO:0001065"}


id: PBO:0088881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter","termid":"PBO:0088881"}


id: PBO:0064885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 scaffold subunit Abeta","termid":"PBO:0064885"}


id: GO:0150137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-37 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:aruk","PMID:30362558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-37 production","synonyms":[{"name":"interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150137"}


id: PATO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive","synonyms":[{"name":"resinous","type":"related"}],"termid":"PATO:0002331"}


id: PBO:0077027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated family member 2","termid":"PBO:0077027"}


id: PR:O74905
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.06","synonyms":[{"name":"Spom972h-rpl902","type":"exact"}],"termid":"PR:O74905"}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["UniProtKB:O60179","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: FYPO:0005617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005617"}


id: GO:0006396
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