# terms

id: PBO:0087976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing: the transfer of the 2'-PO(4) from the splice junction to NAD(+) to form ADP-ribose 1''-2''cyclic phosphate and nicotinamide","termid":"PBO:0087976"}


id: GO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collectin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"collectin receptor activity","termid":"GO:0001863"}


id: GO:0071153
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(o) subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G-protein alpha(o)-synembrin complex","synonyms":[{"name":"Ric-8A G(o) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(o) alpha-2 subunit complex","type":"narrow"}],"termid":"GO:0071153"}


id: PBO:0109017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 19, pseudogene","termid":"PBO:0109017"}


id: GO:0032648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interferon-beta production","secondary_identifiers":["GO:0035547","GO:0045357"],"synonyms":[{"name":"regulation of IFN-beta production","type":"exact"},{"name":"regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"regulation of interferon-beta secretion","type":"narrow"}],"termid":"GO:0032648"}


id: SO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small ribosomal subunit RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_primary_transcript","termid":"SO:0000209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_small_subunit_primary_transcript","synonyms":[{"name":"rRNA small subunit primary transcript","type":"exact"}],"termid":"SO:0000255"}


id: PBO:0108922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX1 pseudogene 2","termid":"PBO:0108922"}


id: FYPO:0004288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of GT dinucleotide microsatellite repeats present in a sequence varies more than normal.","definition_xrefs":["PomBase:al","PMID:18062930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased GT repeat stability","synonyms":[{"name":"decreased GT dinucleotide repeat stability","type":"exact"},{"name":"decreased GT microsatellite repeat stability","type":"exact"},{"name":"reduced GT repeat stability","type":"exact"}],"termid":"FYPO:0004288"}


id: PBO:0080808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 4","termid":"PBO:0080808"}


id: PATO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in a molecular entity by virtue of the molecule possessing no rings that are aromatic.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromaticity","termid":"PATO:0002190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-aromatic","termid":"PATO:0002192"}


id: PBO:0082466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium/H+ antiporter localized to the endoplasmic reticulum membrane; member of the calcium exchanger (CAX) family; potential Cdc28p substrate","termid":"PBO:0082466"}


id: GO:0070644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vitamin D response element (VDRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:17426122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"vitamin D response element binding","synonyms":[{"name":"VDRE binding","type":"exact"}],"termid":"GO:0070644"}


id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: GO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein-1 gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 gamma production","synonyms":[{"name":"CCL9 production","type":"exact"},{"name":"MIP-1g production","type":"exact"},{"name":"chemokine (C-C motif) ligand 9 production","type":"exact"}],"termid":"GO:0071607"}


id: MOD:01232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(12)C labeled N6-propanoyl-L-lysine.","definition_xrefs":["Unimod:58#K","PubMed:11999733","PubMed:12175151","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-propanoyl-L-lysine","termid":"MOD:01398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"3x(12)C labeled N6-propanoyl-L-lysine","synonyms":[{"name":"Propionate labeling reagent light form (N-term & K)","type":"related"},{"name":"Propionyl","type":"related"}],"termid":"MOD:01232"}


id: PBO:0048231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2B","termid":"PBO:0048231"}


id: PBO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_localizes","termid":"PBO:0006200"}


id: GO:0008579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine/serine/threonine phosphatase activity","termid":"GO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0140096","GO:0003674","GO:0016787","GO:0004721"],"is_obsolete":false,"name":"JUN kinase phosphatase activity","termid":"GO:0008579"}


id: PBO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 pseudogene 1","termid":"PBO:0045051"}


id: GO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"'de novo' NAD biosynthetic process","termid":"GO:0034627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006520"],"is_obsolete":false,"name":"'de novo' NAD biosynthetic process from aspartate","secondary_identifiers":["GO:0019355"],"synonyms":[{"name":"de novo NAD biosynthetic process from aspartate","type":"related"},{"name":"nicotinamide nucleotide anabolism from aspartate","type":"exact"},{"name":"nicotinamide nucleotide biosynthetic process from aspartate","type":"exact"},{"name":"nicotinamide nucleotide formation from aspartate","type":"exact"},{"name":"nicotinamide nucleotide synthesis from aspartate","type":"exact"}],"termid":"GO:0034628"}


id: PBO:0044103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A11","termid":"PBO:0044103"}


id: PBO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3","termid":"PBO:0047690"}


id: PBO:0043630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 2","termid":"PBO:0043630"}


id: PBO:0082443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1 phase; CLB5 has a paralog, CLB6, that arose from the whole genome duplication","termid":"PBO:0082443"}


id: GO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of zinc ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to zinc ion starvation","termid":"GO:0120127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion starvation","synonyms":[{"name":"cellular response to zinc ion limitation","type":"exact"},{"name":"cellular response to zinc starvation","type":"exact"}],"termid":"GO:0034224"}


id: GO:1902653
data:
  {"annotated_genes":["SJAG_03018","SJAG_02982","SJAG_00370","SJAG_04059","SJAG_03249","SJAG_02068","SJAG_03349","SJAG_03024","SJAG_04049","SJAG_00717","SJAG_03598","SJAG_04217","SJAG_02044","SJAG_04018","SJAG_04790","SJAG_00770","SJAG_00580","SJAG_04499","SJAG_03235","SJAG_01307","SJAG_03352","SJAG_02104","SJAG_03715","SJAG_02855","SJAG_04865","SJAG_01474","SJAG_04810","SJAG_03509","SJAG_04270","SJAG_03929","SJAG_00158","SJAG_03750","SJAG_00413","SJAG_05311","SJAG_02719","SJAG_00624","SJAG_00453","SJAG_03531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70138,78530,78709,90497,71565,109095,111722,78886,104265,99651,75442,115593,104128,78707,105935,73497,85532,103936,105689,113242,87411,95782,73879,84604,70933,84309,72812,90696,75397,111888,76178,106545,75425,100317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89928],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[106310],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[74954],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[102207,84398],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary alcohol.","definition_xrefs":["PMID:11288200","GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"secondary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol anabolism","type":"exact"},{"name":"secondary alcohol biosynthesis","type":"exact"},{"name":"secondary alcohol formation","type":"exact"},{"name":"secondary alcohol synthesis","type":"exact"}],"termid":"GO:1902653","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0089453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1 /SMN complex subunit Gem6, tandem fusion","termid":"PBO:0089453"}


id: PBO:0077479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200B","termid":"PBO:0077479"}


id: GO:0038105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a transforming growth factor-beta (TGFbeta) protein in the extracellular region, and inhibiting TGFbeta signaling by preventing TGFbeta from binding to its cell surface receptor.","definition_xrefs":["PMID:19855014","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of TGFbeta from receptor via TGFbeta binding","synonyms":[{"name":"extracellular sequestering of TGFbeta","type":"broad"},{"name":"extracellular sequestering of transforming growth factor-beta","type":"broad"}],"termid":"GO:0038105"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: GO:0002161
data:
  {"annotated_genes":["SJAG_03545","SJAG_04738","SJAG_02015","SJAG_01248","SJAG_01259","SJAG_00443","SJAG_04285","SJAG_02428","SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89770,91123,93819,94243,101001,109199,112737],"is_not":false,"summary":null,"term":"GO:0002161"},{"annotations":[102291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043907"},{"annotations":[73161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"The hydrolysis of an incorrectly aminoacylated tRNA.","definition_xrefs":["PMID:16087889","GOC:hjd","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02428":null,"SJAG_03545":null,"SJAG_04285":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016787","GO:0140101","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"aminoacyl-tRNA editing activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid proofreading activity","type":"related"},{"name":"aminoacyl-tRNA hydrolysis activity","type":"related"}],"termid":"GO:0002161","terms_by_termid":{"GO:0002161":null,"GO:0043907":null,"GO:0051500":null}}


id: GO:0035090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Retaining the established polarization of a cell along its apical/basal axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell polarity","termid":"GO:0030011"},{"relation_name":"is_a","term_name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"}


id: PBO:0072457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 21","termid":"PBO:0072457"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: GO:0010869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of receptor biosynthetic process (obsolete GO:0010869)","termid":"GO:0010869"}


id: PBO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_deubiquitination_following_cellular_response_to_hydroxyurea_during_vegetative_growth","termid":"PBO:0036027"}


id: GO:0046834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid phosphorylation","termid":"GO:0046834"}


id: GO:0016428
data:
  {"annotated_genes":["SJAG_02099","SJAG_02417","SJAG_00325","SJAG_01314"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70582,78155,102150,110229],"is_not":false,"summary":null,"term":"GO:0016428"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = a 5-methylcytidine in tRNA + S-adenosyl-L-homocysteine + H+. This modification can occur on seversal residues, including cytidine(34), cytidine(40), cytidine(48), and cytidine(49).","definition_xrefs":["RHEA:61468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00325":null,"SJAG_01314":null,"SJAG_02099":null,"SJAG_02417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA (cytidine-5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8932765","Reactome:R-HSA-6782388","Reactome:R-HSA-6782419","EC:2.1.1.202","Reactome:R-HSA-6785409","Reactome:R-HSA-6785438"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-5-)-methyltransferase activity","type":"related"},{"name":"tRNA (cytosine-5-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA cytosine 5-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate cytosine 5-methyltransferase activity","type":"related"}],"termid":"GO:0016428","terms_by_termid":{"GO:0016428":null}}


id: GO:0021715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the inferior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"medulla oblongata formation","termid":"GO:0021580"},{"relation_name":"part_of","term_name":"inferior olivary nucleus morphogenesis","termid":"GO:0021714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus formation","synonyms":[{"name":"inferior olive biosynthesis","type":"related"},{"name":"inferior olive formation","type":"related"}],"termid":"GO:0021715"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: GO:0040031
data:
  {"annotated_genes":["SJAG_04754","SJAG_03572","SJAG_00083","SJAG_00566","SJAG_01234","SJAG_00559","SJAG_01958","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75094],"is_not":false,"summary":null,"term":"GO:0040031"},{"annotations":[91269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[102600,78807,102661,110926,85904,97401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_01958":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"snRNA modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0040031","terms_by_termid":{"GO:0031120":null,"GO:0040031":null,"GO:0120049":null}}


id: GO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-glucosyl residue from UDP-glucose on to a glucose residue in xyloglucan, forming a beta-1,4-D-glucosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.1.168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"xyloglucan 4-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12419"],"synonyms":[{"name":"UDP-glucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:xyloglucan 1,4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-xyloglucan 4beta-glucosyltransferase activity","type":"related"},{"name":"xyloglucan 4beta-D-glucosyltransferase activity","type":"related"},{"name":"xyloglucan glucosyltransferase activity","type":"related"}],"termid":"GO:0033826"}


id: PBO:0056867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 3","termid":"PBO:0056867"}


id: FYPO:0003239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphodiesterase I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal phosphodiesterase I activity","termid":"FYPO:0003239"}


id: GO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart capillary growth","termid":"GO:0003248"}


id: FYPO:0007754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which phase II of mitotic spindle assembly does not occur. During phase II, the spindle is normally maintained at a constant length during mitotic metaphase.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic spindle assembly","termid":"FYPO:0001683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"abolished mitotic spindle formation phase II","synonyms":[{"name":"abnormal mitotic spindle formation, without spindle phase II","type":"exact"},{"name":"abolished mitotic spindle assembly phase II","type":"exact"},{"name":"abolished mitotic spindle formation (spindle phase two)","type":"exact"}],"termid":"FYPO:0007754"}


id: PBO:0109637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like (pseudogene)","termid":"PBO:0109637"}


id: GO:0047307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2,4-diaminobutyrate + pyruvate = L-alanine + L-aspartate 4-semialdehyde.","definition_xrefs":["RHEA:12380","EC:2.6.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"diaminobutyrate-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02293","MetaCyc:2.6.1.46-RXN"],"synonyms":[{"name":"L-2,4-diaminobutanoate:pyruvate aminotransferase activity","type":"related"},{"name":"L-diaminobutyric acid transaminase activity","type":"related"},{"name":"diaminobutyrate--pyruvate aminotransferase activity","type":"related"},{"name":"diaminobutyrate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047307"}


id: PBO:0004623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate kinase (predicted)","termid":"PBO:0004623"}


id: PBO:0017770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nuf2","termid":"PBO:0017770"}


id: PBO:0079647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S","termid":"PBO:0079647"}


id: GO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine (GlcNAc) in a beta-1,3 linkage to the mannose(beta-1,4)Glc disaccharide core of glycolipids.","definition_xrefs":["GOC:bf","PMID:12130631","PMID:12130651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"UDP-N-acetylglucosamine:beta-D-mannosyl-glycolipid beta-1,3-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0046981"}


id: GO:0002376
data:
  {"annotated_genes":["SJAG_04409","SJAG_00564","SJAG_03155"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112350],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0043032"},{"annotations":[84157],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0050870"},{"annotations":[108531],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030449"}]},"cv_name":"biological_process","definition":"Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.","definition_xrefs":["GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00564":null,"SJAG_03155":null,"SJAG_04409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Immune_system"],"termid":"GO:0002376","terms_by_termid":{"GO:0030449":null,"GO:0043032":null,"GO:0050870":null}}


id: GO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgA isotypes","synonyms":[{"name":"down regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgA isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgA isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"negative regulation of class switching to IgA isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048297"}


id: GO:0017056
data:
  {"annotated_genes":["SJAG_03299","SJAG_03986","SJAG_03182","SJAG_01834","SJAG_01185","SJAG_00093","SJAG_04645","SJAG_00471","SJAG_01374","SJAG_01013","SJAG_05243","SJAG_03873","SJAG_03300","SJAG_04148","SJAG_00375","SJAG_01584","SJAG_03729","SJAG_01065","SJAG_02757","SJAG_02274","SJAG_03593","SJAG_00962","SJAG_04017","SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70613,72347,72534,73098,73880,74434,74818,74886,75359,76113,76493,77476,78659,78743,78821,87651,90041,91729,92233,99282,104190,106904,112207,113118],"is_not":false,"summary":null,"term":"GO:0017056"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules.","definition_xrefs":["GOC:mah","PMID:25802992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01584":null,"SJAG_01834":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02757":null,"SJAG_03182":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03729":null,"SJAG_03873":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of nuclear pore","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-170796","Reactome:R-HSA-6783483","Reactome:R-HSA-192925","Reactome:R-HSA-5661474","Reactome:R-HSA-5252041","GO:0005487","Reactome:R-HSA-1176059","Reactome:R-HSA-192627","Reactome:R-HSA-5578744"],"synonyms":[{"name":"nuclear pore activity","type":"related"},{"name":"nucleocytoplasmic transporter activity","type":"exact"}],"termid":"GO:0017056","terms_by_termid":{"GO:0017056":null}}


id: PBO:0051655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 10","termid":"PBO:0051655"}


id: GO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete phagosome formation (obsolete GO:0006912)","synonyms":[{"name":"phagosome formation","type":"exact"}],"termid":"GO:0006912"}


id: PBO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036129"}


id: FYPO:0003881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mtDNA level","termid":"FYPO:0003769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mtDNA absent from cell","synonyms":[{"name":"absent mtDNA","type":"exact"},{"name":"mitochondrial DNA absent from cell","type":"exact"},{"name":"mtDNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mtDNA absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003881"}


id: PBO:0014266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex subunit Rpn15/Dss11","termid":"PBO:0014266"}


id: PBO:0077099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8 homolog B","termid":"PBO:0077099"}


id: GO:0061671
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109416],"is_not":false,"summary":null,"term":"GO:0061671"}]},"cv_name":"cellular_component","definition":"A protein complex located at the mitochondrial ribosome tunnel exit that is involved in efficient translation and protein complex assembly.","definition_xrefs":["GOC:rb","PMID:21670217","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Cbp3p-Cbp6 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061671","terms_by_termid":{"GO:0061671":null}}


id: GO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate phosphatase activity (obsolete GO:0034416)","synonyms":[{"name":"2,3-bisphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglyceric acid phosphatase activity","type":"exact"},{"name":"diphosphoglycerate phosphatase activity","type":"exact"},{"name":"glycerate-2,3-diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034416"}


id: GO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + 2 H2O = 3-beta-D-galactosyl-sn-glycerol + 2 carboxylates.","definition_xrefs":["EC:3.1.1.26","MetaCyc:GALACTOLIPASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"galactolipase activity","secondary_identifiers":["RHEA:13189"],"synonyms":[{"name":"1,2-diacyl-3-beta-D-galactosyl-sn-glycerol acylhydrolase activity","type":"related"},{"name":"galactolipid acylhydrolase activity","type":"related"},{"name":"galactolipid lipase activity","type":"related"},{"name":"polygalactolipase activity","type":"related"}],"termid":"GO:0047714"}


id: FYPO:0005046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation. Although one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated, mitotic sister chromatid segregation does eventually go on to complete separation of chromosomes.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"has_part","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"lagging mitotic chromosomes, with complete sister chromatid separation","termid":"FYPO:0004101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation with lagging chromosomes, complete sister chromatid separation, and decreased rate of spindle elongation during mitotic cell cycle","type":"related"},{"name":"lagging mitotic chromosomes, with complete sister chromatid separation and decreased spindle elongation rate","type":"exact"},{"name":"lagging mitotic chromosomes, with complete sister chromatid separation, and decreased rate of mitotic spindle elongation","type":"exact"},{"name":"lagging mitotic sister chromatids, with complete sister chromatid separation, and decreased rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0005046"}


id: PBO:0081068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC1 pseudogene 1","termid":"PBO:0081068"}


id: GO:0050519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apo-citrate lyase + 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA = diphosphate + holo-citrate lyase.","definition_xrefs":["EC:2.7.7.61","MetaCyc:2.7.7.61-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"holo-citrate lyase synthase activity","secondary_identifiers":["RHEA:16333"],"synonyms":[{"name":"2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase activity","type":"related"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase activity","type":"related"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase adenylyltransferase activity","type":"related"},{"name":"CitX","type":"related"},{"name":"holo-ACP synthase activity","type":"related"}],"termid":"GO:0050519"}


id: PBO:0070008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1305, pseudogene","termid":"PBO:0070008"}


id: PBO:0055865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 12","termid":"PBO:0055865"}


id: SO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron (mitochondrial, chloroplast, nuclear or prokaryotic) that encodes a double strand sequence specific endonuclease allowing for mobility.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"mobile","termid":"SO:0001234"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"},{"relation_name":"is_a","term_name":"mobile_genetic_element","termid":"SO:0001037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_intron","synonyms":[{"name":"mobile intron","type":"exact"}],"termid":"SO:0000666"}


id: GO:0033158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein import into nucleus, translocation (obsolete GO:0033158)","synonyms":[{"name":"regulation of protein import into cell nucleus, translocation","type":"exact"}],"termid":"GO:0033158"}


id: PR:Q9URT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L34-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.15","synonyms":[{"name":"60S ribosomal protein L34-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3402","type":"exact"}],"termid":"PR:Q9URT8"}


id: GO:1905053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of base-excision repair.","definition_xrefs":["GO_REF:0000058","GOC:ah","GOC:TermGenie","PMID:18973764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"positively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of base-excision repair","synonyms":[{"name":"activation of BER","type":"narrow"},{"name":"activation of base-excision repair","type":"narrow"},{"name":"positive regulation of BER","type":"exact"},{"name":"up regulation of BER","type":"exact"},{"name":"up regulation of base-excision repair","type":"exact"},{"name":"up-regulation of BER","type":"exact"},{"name":"up-regulation of base-excision repair","type":"exact"},{"name":"upregulation of BER","type":"exact"},{"name":"upregulation of base-excision repair","type":"exact"}],"termid":"GO:1905053"}


id: GO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with melanocyte-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["PMID:7581459","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"melanocyte-stimulating hormone receptor activity","synonyms":[{"name":"MSH receptor activity","type":"broad"},{"name":"MSHR activity","type":"broad"},{"name":"melanocyte stimulating hormone receptor activity","type":"exact"},{"name":"melanophore-stimulating hormone receptor activity","type":"exact"}],"termid":"GO:0004980"}


id: PBO:0061727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 1","termid":"PBO:0061727"}


id: PBO:0005101
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not detected in other Schizos","termid":"PBO:0005101"}


id: GO:0052244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in other organism involved in symbiotic interaction (obsolete GO:0052244)","synonyms":[{"name":"negative energy taxis in other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052244"}


id: MOD:01479
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 4'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-fluoro-L-tryptophan","synonyms":[{"name":"4-fluorotryptophan","type":"exact"}],"termid":"MOD:01479"}


id: GO:1990009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cell.","definition_xrefs":["GOC:mtg_apoptosis","PMID:15558487","PMID:24664675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cell apoptotic process","secondary_identifiers":["GO:0046674"],"synonyms":[{"name":"induction of retinal programmed cell death","type":"related"}],"termid":"GO:1990009"}


id: PBO:0017421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contained_in","termid":"PBO:0017421"}


id: GO:0001667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell migration that is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ameboidal-type cell migration","synonyms":[{"name":"ameboid cell migration","type":"exact"},{"name":"amoeboid cell migration","type":"exact"},{"name":"amoeboidal cell migration","type":"exact"}],"termid":"GO:0001667"}


id: PBO:0044686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDN and PRKAG1 antisense RNA 1","termid":"PBO:0044686"}


id: PBO:0049505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 12","termid":"PBO:0049505"}


id: GO:0047347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + NDP = phosphate + NDP-aldose.","definition_xrefs":["EC:2.7.7.37","MetaCyc:2.7.7.37-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"aldose-1-phosphate nucleotidyltransferase activity","synonyms":[{"name":"NDP sugar phosphorylase activity","type":"related"},{"name":"NDP-aldose phosphorylase activity","type":"related"},{"name":"NDP-sugar phosphorylase activity","type":"broad"},{"name":"NDP:aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDP:alpha-D-aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDPaldose phosphorylase activity","type":"related"},{"name":"glucose 1-phosphate inosityltransferase activity","type":"related"},{"name":"nucleoside diphosphate sugar:orthophosphate nucleotidyltransferase activity","type":"related"},{"name":"nucleoside diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar nucleotide phosphorylase activity","type":"related"},{"name":"sugar phosphate nucleotidyltransferase activity","type":"related"},{"name":"sugar-1-phosphate nucleotidyltransferase activity","type":"broad"}],"termid":"GO:0047347"}


id: PBO:0060237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene like 2","termid":"PBO:0060237"}


id: GO:0005502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11-cis retinal, an isomer of retinal that plays an important role in the visual process in most vertebrates. 11-cis retinal combines with opsin in the rods (scotopsin) to form rhodopsin or visual purple. Retinal is one of the three compounds that makes up vitamin A.","definition_xrefs":["PMID:24403072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal binding","termid":"GO:0016918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"11-cis retinal binding","synonyms":[{"name":"11-cis retinaldehyde binding","type":"exact"},{"name":"11-cis-retinal binding","type":"narrow"},{"name":"vitamin A binding","type":"broad"}],"termid":"GO:0005502"}


id: GO:0039584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein kinase activity (obsolete GO:0039584)","termid":"GO:0039584"}


id: GO:0033749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified arginine residue at position 3 of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H4 demethylase activity","termid":"GO:0141058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016491","GO:0032452","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H4R3 demethylase activity","synonyms":[{"name":"histone H4-methyl-arginine-3 demethylase activity","type":"exact"},{"name":"histone H4R3me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0033749"}


id: PBO:0061884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA1 antisense RNA 1","termid":"PBO:0061884"}


id: GO:0004756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + hydrogen selenide = AMP + 3 H+ + phosphate + selenophosphorate.","definition_xrefs":["RHEA:18737","EC:2.7.9.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"selenide, water dikinase activity","secondary_identifiers":["UM-BBD_reactionID:r0833","MetaCyc:2.7.9.3-RXN","Reactome:R-HSA-8959510","KEGG_REACTION:R03595"],"synonyms":[{"name":"ATP:selenide, water phosphotransferase activity","type":"related"},{"name":"selenide,water dikinase activity","type":"related"},{"name":"selenium donor protein activity","type":"related"},{"name":"selenophosphate synthase activity","type":"exact"},{"name":"selenophosphate synthetase activity","type":"related"}],"termid":"GO:0004756"}


id: PBO:0064986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 3","termid":"PBO:0064986"}


id: PBO:0040595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated agonist of cell death","termid":"PBO:0040595"}


id: PBO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 1","termid":"PBO:0047168"}


id: PBO:0040895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMPR1B divergent transcript","termid":"PBO:0040895"}


id: PBO:0061687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 155","termid":"PBO:0061687"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: GO:0045838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane potential","synonyms":[{"name":"activation of membrane potential","type":"narrow"},{"name":"elevation of membrane potential","type":"exact"},{"name":"stimulation of membrane potential","type":"narrow"},{"name":"up regulation of membrane potential","type":"exact"},{"name":"up-regulation of membrane potential","type":"exact"},{"name":"upregulation of membrane potential","type":"exact"}],"termid":"GO:0045838"}


id: PBO:0072386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 12","termid":"PBO:0072386"}


id: GO:1990628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of RseA, RseB and RpoE. It form the inactive form of the sigma-E transcription factor. In response to stress, outer membrane proteins accumulate in the periplasm and activate cleavage of RseA periplasmic domain by DegS, triggering a proteolytic cascade that frees sigma-E to activate gene expression. RseB binding to RseA prevents activated DegS from cleaving RseA. Sigma-E-mediated envelope stress response is the major pathway to ensure homeostasis in the envelope compartment of the cell.","definition_xrefs":["GOC:bhm","PMID:20190044"],"gene_count":0,"genotype_count":0,"name":"obsolete Sigma-E factor negative regulation complex (obsolete GO:1990628)","synonyms":[{"name":"RseA-RseB-RpoE complex","type":"related"},{"name":"Sigma-E factor negative regulation complex","type":"exact"}],"termid":"GO:1990628"}


id: GO:0160110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumens of the A and B tubules of the axonemal microtuble doublet that helps stabilize the doublet microtubule.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal outer doublet","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}


id: GO:1990375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the baculum over time, from its formation to the mature structure.","definition_xrefs":["GOC:sl","PMID:21471296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baculum development","synonyms":[{"name":"os penis development","type":"exact"},{"name":"penile bone development","type":"exact"},{"name":"penis bone development","type":"exact"}],"termid":"GO:1990375"}


id: FYPO:0002550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show increased sensitivity to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress","termid":"FYPO:0002549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to UV","synonyms":[{"name":"UV resistance: decreased","type":"related"},{"name":"decreased cell population growth during cellular response to UV","type":"exact"},{"name":"decreased growth during cellular response to UV","type":"exact"},{"name":"hypersensitive to UV","type":"exact"},{"name":"increased sensitivity to UV irradiation","type":"exact"},{"name":"sensitive to ultraviolet light","type":"exact"}],"termid":"FYPO:0002550"}


id: FYPO:0001960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA topoisomerase II activity","synonyms":[{"name":"abnormal DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"}],"termid":"FYPO:0001960"}


id: FYPO:0008080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a heptakisphosphate 5-kinase is decreased.","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008080"}


id: PBO:0060126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 27","termid":"PBO:0060126"}


id: PBO:0057758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1972-1","termid":"PBO:0057758"}


id: GO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secondary leaflet attains its shape. A secondary leaflet develops by branching or division of a primary leaflet.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary leaflet morphogenesis","termid":"GO:0060779"}


id: PBO:0055207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2632","termid":"PBO:0055207"}


id: GO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NADP+ = 2 aquacob(III)alamin + NADPH + H+.","definition_xrefs":["EC:1.16.1.5","MetaCyc:AQUACOBALAMIN-REDUCTASE-NADPH-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase (NADPH) activity (obsolete GO:0050444)","secondary_identifiers":["RHEA:20752"],"synonyms":[{"name":"NADPH-linked aquacobalamin reductase activity","type":"related"},{"name":"NADPH2:aquacob(III)alamin oxidoreductase activity","type":"related"},{"name":"NADPH:aquacob(III)alamin oxidoreductase activity","type":"related"},{"name":"aquacobalamin (reduced nicotinamide adenine dinucleotide phosphate) activity","type":"related"},{"name":"aquacobalamin (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"cob(II)alamin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050444"}


id: PBO:0090792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Pab2","termid":"PBO:0090792"}


id: PBO:0060493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminic acid phosphatase","termid":"PBO:0060493"}


id: GO:0050741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-serine.","definition_xrefs":["RESID:AA0350"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-serine (obsolete GO:0050741)","termid":"GO:0050741"}


id: GO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of one or more alpha-linked glutamyl units to the gamma carboxyl group of peptidyl-glutamic acid.","definition_xrefs":["RESID:AA0202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyglutamylation","termid":"GO:0018095"}


id: GO:1990680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a melanocyte-stimulating hormone stimulus. The binding of any one of three melanocyte-stimulating hormones causes dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["PMID:17036007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to melanocyte-stimulating hormone","synonyms":[{"name":"response to MSH","type":"exact"}],"termid":"GO:1990680"}


id: PBO:0063402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 1","termid":"PBO:0063402"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: PATO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Consisting of segments or similar parts arranged in a longitudinal series.","direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmented","termid":"PATO:0002312"}


id: PBO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39","termid":"PBO:0005577"}


id: FYPO:0005020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of actomyosin contractile ring contraction","synonyms":[{"name":"normal duration of actomyosin contractile ring constriction","type":"exact"},{"name":"normal duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal duration of contractile ring contraction","type":"exact"},{"name":"normal duration of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0005020"}


id: PBO:0064574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PORCN divergent transcript","termid":"PBO:0064574"}


id: PBO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport Yip3 (predicted)","termid":"PBO:0018124"}


id: GO:0033547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 1D myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C; in this pathway, inositol 1,4,5-trisphosphate is successively phosphorylated to yield inositol hexakisphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-4541"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol hexakisphosphate biosynthetic process, via direct phosphorylation of inositol 1,4,5-trisphosphate (obsolete GO:0033547)","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthetic process, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"phytate biosynthesis, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"phytate biosynthetic process, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"}],"termid":"GO:0033547"}


id: GO:0002941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of type B synoviocytes by cell division, resulting in the expansion of their population. A type B synoviocyte is a fibroblast-like cell found in synovial tissues.","definition_xrefs":["PMID:10770586","PMID:9546370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synoviocyte proliferation","termid":"GO:0002941"}


id: GO:0031340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle fusion","synonyms":[{"name":"activation of vesicle fusion","type":"narrow"},{"name":"stimulation of vesicle fusion","type":"narrow"},{"name":"up regulation of vesicle fusion","type":"exact"},{"name":"up-regulation of vesicle fusion","type":"exact"},{"name":"upregulation of vesicle fusion","type":"exact"}],"termid":"GO:0031340"}


id: GO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pro-T cell. Pro-T cells are the earliest stage of the T cell lineage but are not fully committed.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell differentiation","synonyms":[{"name":"pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:0002572"}


id: GO:0004640
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78075],"is_not":false,"summary":null,"term":"GO:0004640"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.","definition_xrefs":["EC:5.3.1.24","RHEA:21540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylanthranilate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03509","MetaCyc:PRAISOM-RXN"],"synonyms":[{"name":"IGPS:PRAI (indole-3-glycerol-phosphate synthetase/N-5'-phosphoribosylanthranilate isomerase complex)","type":"related"},{"name":"N-(5'-phosphoribosyl)anthranilate isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate aldose-ketose-isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate ketol-isomerase activity","type":"related"},{"name":"PRA isomerase activity","type":"related"},{"name":"PRAI activity","type":"related"}],"termid":"GO:0004640","terms_by_termid":{"GO:0004640":null}}


id: GO:0032110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein histidine kinase activity","termid":"GO:0032110"}


id: FYPO:0007092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is increased during a cellular response to zinc ions, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:31515876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA binding","termid":"FYPO:0000657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000653","FYPO:0000707"],"is_obsolete":false,"name":"increased DNA binding during cellular response to zinc ion","synonyms":[{"name":"increased DNA binding during cellular response to zinc","type":"exact"}],"termid":"FYPO:0007092"}


id: GO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}


id: GO:0003909
data:
  {"annotated_genes":["SJAG_02527","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78774,88527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140097"],"is_obsolete":false,"name":"DNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-175258","Reactome:R-HSA-174456","Reactome:R-HSA-5651805","Reactome:R-HSA-5690997","Reactome:R-HSA-69173","Reactome:R-HSA-5693604","Reactome:R-HSA-5358592","Reactome:R-HSA-5687675","Reactome:R-HSA-5649734","Reactome:R-HSA-5651789","Reactome:R-HSA-6782227","Reactome:R-HSA-73931"],"termid":"GO:0003909","terms_by_termid":{"GO:0003910":null}}


id: GO:0047785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + cortisol = adenosine 3',5'-diphosphate + cortisol 21-sulfate + H+.","definition_xrefs":["RHEA:11884","EC:2.8.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cortisol sulfotransferase activity","secondary_identifiers":["MetaCyc:CORTISOL-SULFOTRANSFERASE-RXN","KEGG_REACTION:R02839"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:cortisol 21-sulfotransferase activity","type":"related"},{"name":"cortisol sulphotransferase activity","type":"exact"},{"name":"glucocorticoid sulfotransferase activity","type":"related"},{"name":"glucocorticosteroid sulfotransferase activity","type":"broad"}],"termid":"GO:0047785"}


id: GO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.","definition_xrefs":["GOC:ef","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cocaine","termid":"GO:0042220"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["ISBN:0471522295","PMID:17446882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: GO:0141133
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114164],"is_not":false,"summary":null,"term":"GO:0141133"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 4 S-adenosyl-L-methionine = diphthine methyl ester-[translation elongation factor 2] + 3 H+ + 4 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:24739148","RHEA:42652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0008276","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diphthine methyl ester synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.314","MetaCyc:RXN-15775"],"termid":"GO:0141133","terms_by_termid":{"GO:0141133":null}}


id: PBO:0085515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S16 and bacterial S9; RPS16A has a paralog, RPS16B, that arose from the whole genome duplication","termid":"PBO:0085515"}


id: PBO:0076727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia/lymphoma 6","termid":"PBO:0076727"}


id: PBO:0029461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_morphology","termid":"PBO:0029461"}


id: GO:0034927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-1,2-oxide + H2O.","definition_xrefs":["UM-BBD_reactionID:r0943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyrene 1,2-monooxygenase activity","termid":"GO:0034927"}


id: GO:0046647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell proliferation","synonyms":[{"name":"down regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"down-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"downregulation of gamma-delta T cell proliferation","type":"exact"},{"name":"inhibition of gamma-delta T cell proliferation","type":"narrow"},{"name":"negative regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046647"}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:dph","GOC:jid","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: GO:0160133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a bicarbonate (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["PMID:18400985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"bicarbonate channel activity","synonyms":[{"name":"hydrogencarbonate channel activity","type":"exact"}],"termid":"GO:0160133"}


id: PBO:0065445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC3 interacting protein","termid":"PBO:0065445"}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: PBO:0034476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_spindle_during_meiosis_I","termid":"PBO:0034476"}


id: GO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism modulates the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of biological quality in another organism","termid":"GO:0044553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of blood pressure in another organism","synonyms":[{"name":"modulation of blood pressure in other organism","type":"exact"},{"name":"regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044495"}


id: GO:0010066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the ground tissues.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground meristem histogenesis","termid":"GO:0010066"}


id: GO:1900126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"regulation of hyaluronan biosynthetic process","termid":"GO:1900125"},{"relation_name":"negatively_regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of hyaluronan biosynthetic process","synonyms":[{"name":"down regulation of hyaluronan anabolism","type":"exact"},{"name":"down regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down regulation of hyaluronan formation","type":"exact"},{"name":"down regulation of hyaluronan synthesis","type":"exact"},{"name":"down-regulation of hyaluronan anabolism","type":"exact"},{"name":"down-regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down-regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down-regulation of hyaluronan formation","type":"exact"},{"name":"down-regulation of hyaluronan synthesis","type":"exact"},{"name":"downregulation of hyaluronan anabolism","type":"exact"},{"name":"downregulation of hyaluronan biosynthesis","type":"exact"},{"name":"downregulation of hyaluronan biosynthetic process","type":"exact"},{"name":"downregulation of hyaluronan formation","type":"exact"},{"name":"downregulation of hyaluronan synthesis","type":"exact"},{"name":"inhibition of hyaluronan anabolism","type":"exact"},{"name":"inhibition of hyaluronan biosynthesis","type":"exact"},{"name":"inhibition of hyaluronan biosynthetic process","type":"narrow"},{"name":"inhibition of hyaluronan formation","type":"exact"},{"name":"inhibition of hyaluronan synthesis","type":"exact"},{"name":"negative regulation of hyaluronan anabolism","type":"exact"},{"name":"negative regulation of hyaluronan biosynthesis","type":"exact"},{"name":"negative regulation of hyaluronan formation","type":"exact"},{"name":"negative regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900126"}


id: PBO:0046243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1","termid":"PBO:0046243"}


id: PBO:0088902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi UDP-galactose transmembrane transporter Gms2","termid":"PBO:0088902"}


id: GO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell mediated immunity","synonyms":[{"name":"down regulation of B cell mediated immunity","type":"exact"},{"name":"down-regulation of B cell mediated immunity","type":"exact"},{"name":"downregulation of B cell mediated immunity","type":"exact"},{"name":"inhibition of B cell mediated immunity","type":"narrow"},{"name":"negative regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"negative regulation of B-cell mediated immunity","type":"exact"},{"name":"negative regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002713"}


id: GO:0051284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"positively_regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sequestering of calcium ion","synonyms":[{"name":"activation of sequestering of calcium ion","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"positive regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"positive regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"positive regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"positive regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of storage of calcium ion (Ca2+)","type":"exact"},{"name":"stimulation of sequestering of calcium ion","type":"narrow"},{"name":"up regulation of sequestering of calcium ion","type":"exact"},{"name":"up-regulation of sequestering of calcium ion","type":"exact"},{"name":"upregulation of sequestering of calcium ion","type":"exact"}],"termid":"GO:0051284"}


id: PBO:0066453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 5, pseudogene","termid":"PBO:0066453"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: GO:2000601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:21454476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"positive regulation of actin nucleation","termid":"GO:0051127"},{"relation_name":"positively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"positive regulation of actin filament branch nucleation","type":"exact"},{"name":"positive regulation of branched actin filament nucleation","type":"exact"}],"termid":"GO:2000601"}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: PBO:0079482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma pseudogene, Y-linked","termid":"PBO:0079482"}


id: PBO:0061214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 6","termid":"PBO:0061214"}


id: GO:0051497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of actin filament bundle assembly","termid":"GO:0032232"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"negatively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of stress fiber assembly","synonyms":[{"name":"down regulation of stress fiber formation","type":"related"},{"name":"down-regulation of stress fiber formation","type":"exact"},{"name":"downregulation of stress fiber formation","type":"related"},{"name":"inhibition of stress fiber formation","type":"narrow"},{"name":"negative regulation of stress fibre biosynthesis","type":"related"},{"name":"negative regulation of stress fibre formation","type":"related"}],"termid":"GO:0051497"}


id: FYPO:0005138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:15238514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal meiotic recombination double-strand break repair","synonyms":[{"name":"normal DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"normal double-strand break repair during meiotic recombination","type":"exact"},{"name":"normal double-strand break repair involved in reciprocal meiotic recombination","type":"exact"}],"termid":"FYPO:0005138"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: PBO:0088229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0088229"}


id: PBO:0051765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 8 pseudogene 1","termid":"PBO:0051765"}


id: PR:Q9P782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activator of 90 kDa heat shock protein ATPase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03151","PANTHER:PTHR13009:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1711.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.08","secondary_identifiers":["UniProtKB:Q9P782"],"synonyms":[{"name":"Spom972h-AHSA1","type":"exact"}],"termid":"PR:Q9P782"}


id: PBO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation_with_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0036189"}


id: PBO:0077610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 1","termid":"PBO:0077610"}


id: FYPO:0006024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments is normal (i.e. indistinguishable from wild type). The relevant actin-binding protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal actin filament binding","synonyms":[{"name":"normal F-actin binding","type":"exact"},{"name":"normal filamentous actin binding","type":"exact"}],"termid":"FYPO:0006024"}


id: PBO:0028429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyridoxine_import","termid":"PBO:0028429"}


id: PBO:0067389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 494, pseudogene","termid":"PBO:0067389"}


id: PBO:0077902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase gamma 1","termid":"PBO:0077902"}


id: GO:0070528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"protein kinase C signaling","synonyms":[{"name":"PKC signal transduction","type":"exact"},{"name":"PKC signaling cascade","type":"related"},{"name":"protein kinase C signal transduction","type":"exact"},{"name":"protein kinase C signaling cascade","type":"related"},{"name":"protein kinase C signalling cascade","type":"related"}],"termid":"GO:0070528"}


id: PBO:0072070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12","termid":"PBO:0072070"}


id: GO:1903743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:kmv","PMID:25329901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle transport along microtubule","termid":"GO:1901609"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle transport","termid":"GO:1902804"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"negatively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"down regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"down-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"downregulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"inhibition of anterograde synaptic vesicle transport","type":"narrow"}],"termid":"GO:1903743"}


id: GO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}


id: PBO:0089563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2","termid":"PBO:0089563"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: GO:0072397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about the formation and integrity of cytokinetic structures, such as the contractile ring, is received and converted into a molecular signal, contributing to a cytokinesis checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cytokinesis checkpoint (obsolete GO:0072397)","synonyms":[{"name":"cytokinesis checkpoint sensor mechanism","type":"related"},{"name":"cytokinesis checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in septin checkpoint","type":"related"},{"name":"sensing involved in cytokinesis checkpoint","type":"related"},{"name":"sensing involved in septin checkpoint","type":"related"},{"name":"septin checkpoint sensor mechanism","type":"related"},{"name":"septin checkpoint sensor process","type":"related"}],"termid":"GO:0072397"}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: GO:0006859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed extracellular movement of carbohydrates.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular carbohydrate transport (obsolete GO:0006859)","termid":"GO:0006859"}


id: PBO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein and tRNA methyltransferase regulatory subunit Trm112 (predicted)","termid":"PBO:0000322"}


id: GO:0072647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-epsilon due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interferon-epsilon production","secondary_identifiers":["GO:0072648"],"synonyms":[{"name":"IFN-epsilon production","type":"exact"},{"name":"IFNE production","type":"exact"},{"name":"interferon-epsilon secretion","type":"narrow"}],"termid":"GO:0072647"}


id: PBO:0068677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 58, pseudogene","termid":"PBO:0068677"}


id: PBO:0028131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylase_activity","termid":"PBO:0028131"}


id: PBO:0004238
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic ID does not reflect chromosome","termid":"PBO:0004238"}


id: GO:0047924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + NADP+ = geranial + NADPH.","definition_xrefs":["EC:1.1.1.183","MetaCyc:GERANIOL-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"geraniol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1163","RHEA:14521"],"synonyms":[{"name":"geraniol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047924"}


id: PBO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog B","termid":"PBO:0046680"}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: GO:0021801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:dgh","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"},{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex radial glia-guided migration","synonyms":[{"name":"cerebral cortex radial glia guided migration","type":"exact"},{"name":"cerebral cortex radial glia-dependent cell migration","type":"exact"},{"name":"glial-guided locomotion","type":"related"}],"termid":"GO:0021801"}


id: PBO:0087297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad1p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein","termid":"PBO:0087297"}


id: GO:1904939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:BHF","GOC:bc","GOC:BHF_miRNA","PMID:23575307"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904939)","synonyms":[{"name":"regulation of TdT","type":"related"},{"name":"regulation of addase activity","type":"exact"},{"name":"regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of terminal addition enzyme activity","type":"related"},{"name":"regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"regulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904939"}


id: GO:1901458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to acetate","termid":"GO:1901457"},{"relation_name":"negatively_regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to acetate","synonyms":[{"name":"down regulation of response to acetate","type":"exact"},{"name":"down-regulation of response to acetate","type":"exact"},{"name":"downregulation of response to acetate","type":"exact"},{"name":"inhibition of response to acetate","type":"narrow"}],"termid":"GO:1901458"}


id: MOD:01714
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01714"}


id: GO:0140755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus triggers host intracellular membranes to be reorganized, forming membranous webs, which are thought to be the site of replication or certain viruses, for example the HPV virus.","definition_xrefs":["PMID:34699787","PMID:4372566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reorganization of host cellular membranes to establish sites of replication","termid":"GO:0140755"}


id: GO:0008570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP by myosin that provides the energy for actomyosin contraction.","definition_xrefs":["EC:3.6.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete myosin ATPase activity (obsolete GO:0008570)","synonyms":[{"name":"myosin ATPase activity","type":"exact"}],"termid":"GO:0008570"}


id: PBO:0086383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis","termid":"PBO:0086383"}


id: PBO:0086481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial transport protein; null mutant is viable, exhibits decreased levels of chitin and normal resistance to calcofluor white","termid":"PBO:0086481"}


id: PBO:0058397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4769","termid":"PBO:0058397"}


id: PR:Q9Y7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase mTOR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02637","PANTHER:PTHR11139:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase tor2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.07c","secondary_identifiers":["UniProtKB:Q9Y7K2"],"synonyms":[{"name":"PI3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PI3K tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-3-kinase tor2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTOR","type":"exact"}],"termid":"PR:Q9Y7K2"}


id: GO:0008489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + a glucosylceramide = a lactosylceramide + uridine-5'-diphosphate. The glucosylceramide has sphinganine as the long chain base.","definition_xrefs":["MetaCyc:RXN-10764","PMID:9593693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9851347"],"synonyms":[{"name":"LacCer synthase activity","type":"exact"},{"name":"UDP-galactose glucosylceramide beta-1,4-galactosyltransferase activity","type":"exact"},{"name":"lactosylceramide synthase activity","type":"exact"}],"termid":"GO:0008489"}


id: PBO:0053681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 868","termid":"PBO:0053681"}


id: GO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine or peptidyl-serine to peptidyl-L-3-oxoalanine; characteristic of the active sites of arylsulfatases.","definition_xrefs":["RESID:AA0185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-oxoalanine biosynthetic process from peptidyl-cysteine or peptidyl-serine","synonyms":[{"name":"peptidyl-L-3-oxoalanine anabolism from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine formation from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine synthesis from peptidyl-cysteine or peptidyl-serine","type":"exact"}],"termid":"GO:0018083"}


id: PBO:0068249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N1","termid":"PBO:0068249"}


id: PBO:0078946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 4-1","termid":"PBO:0078946"}


id: GO:1902080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","PMID:8349590","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"}


id: PBO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein, Ino80 complex subunit Arp8","termid":"PBO:0006832"}


id: GO:0008859
data:
  {"annotated_genes":["SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111072],"is_not":false,"summary":null,"term":"GO:0008859"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction.","definition_xrefs":["EC:3.1.13.1","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0140098","GO:0004527","GO:0016787"],"is_obsolete":false,"name":"exoribonuclease II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.1-RXN"],"synonyms":[{"name":"ribonuclease II activity","type":"related"},{"name":"ribonuclease Q","type":"related"},{"name":"5'-exoribonuclease activity","type":"related"},{"name":"BN ribonuclease activity","type":"related"},{"name":"Escherichia coli exo-RNase II","type":"related"},{"name":"RNase II","type":"related"},{"name":"RNase II activity","type":"exact"}],"termid":"GO:0008859","terms_by_termid":{"GO:0008859":null}}


id: PBO:0056117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 2","termid":"PBO:0056117"}


id: PBO:0042233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 5 (pseudogene)","termid":"PBO:0042233"}


id: PBO:0057086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 182","termid":"PBO:0057086"}


id: PBO:0076336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 4","termid":"PBO:0076336"}


id: PBO:0044752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 39A pseudogene 1","termid":"PBO:0044752"}


id: FYPO:0006356
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, is abnormal.","definition_xrefs":["GO:0006338","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin remodeling","synonyms":[{"name":"abnormal chromatin modeling","type":"exact"},{"name":"abnormal chromatin remodelling","type":"exact"}],"termid":"FYPO:0006356"}


id: GO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a plastid is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of plastid location","synonyms":[{"name":"maintenance of plastid localization","type":"related"}],"termid":"GO:0051688"}


id: PBO:0043869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich C-terminal 1","termid":"PBO:0043869"}


id: PBO:0056387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK activated protein kinase 2","termid":"PBO:0056387"}


id: GO:0010999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a result of heme levels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by heme","termid":"GO:0010999"}


id: PBO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 6, pseudogene","termid":"PBO:0050914"}


id: FYPO:0000031
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02923:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02923","name":"spk1delta","uniquename":"SJAG_02923:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04009:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04009","name":"ste11delta","uniquename":"SJAG_04009:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116048,116042,116038,116045,116037,116031,116063,116047,115994,116061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000280"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is abnormal. Conjugation, also known as mating, is a process that results in the union of cellular and genetic information from cells of compatible mating types.","definition_xrefs":["PomBase:mah","GO:0000747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"},{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04009":null},"genotype_count":10,"genotypes_by_uniquename":{"byr1delta":{"display_name":"byr1delta","display_uniquename":"byr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00993:allele-1","expression":"Null"}]}]},"byr2delta":{"display_name":"byr2delta","display_uniquename":"byr2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01718:allele-1","expression":"Null"}]}]},"gap1delta":{"display_name":"gap1delta","display_uniquename":"gap1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02379:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"spk1delta":{"display_name":"spk1delta","display_uniquename":"spk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02923:allele-1","expression":"Null"}]}]},"ste11delta":{"display_name":"ste11delta","display_uniquename":"ste11delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04009:allele-1","expression":"Null"}]}]},"ste6delta":{"display_name":"ste6delta","display_uniquename":"ste6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02486:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mating","references_by_uniquename":{"PMID:29566183":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02379","SJAG_02592","SJAG_01794","SJAG_02923","SJAG_03453","SJAG_00514","SJAG_01718","SJAG_04009","SJAG_00993","SJAG_02486"],"single_locus_genotype_uniquenames":["byr2delta","ste6delta","scd1delta","scd2delta","gap1delta","ste11delta","ras1delta","spk1delta","sty1delta","byr1delta"],"synonyms":[{"name":"abnormal conjugation","type":"exact"},{"name":"abnormal conjugation with cellular fusion","type":"exact"},{"name":"abnormal zygote formation","type":"related"},{"name":"conjugation defects","type":"exact"}],"termid":"FYPO:0000031","terms_by_termid":{"FYECO:0000272":null,"FYPO:0000280":null,"FYPO_EXT:0000001":null}}


id: PBO:0066261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 1","termid":"PBO:0066261"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["PMID:18687036","GOC:bf","GOC:bm","GOC:jl","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: PBO:0083358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene REV1; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0083358"}


id: PBO:0053823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1087","termid":"PBO:0053823"}


id: GO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from haustorium (obsolete GO:0085004)","termid":"GO:0085004"}


id: GO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to, but narrower than, that of pepsin A. Does not cleave the Gln4-His5 bond in the B chain of insulin.","definition_xrefs":["EC:3.4.23.5"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin D activity (obsolete GO:0004192)","synonyms":[{"name":"cathepsin D activity","type":"exact"}],"termid":"GO:0004192"}


id: FYPO:0004968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is decreased relative to normal under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0002058","FYPO:0002060","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"decreased vegetative cell population growth during phosphate starvation","synonyms":[{"name":"decreased vegetative cell population growth during phosphate depletion","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate deprivation","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate limitation","type":"exact"},{"name":"decreased vegetative cell population growth in response to phosphate starvation","type":"exact"},{"name":"reduced vegetative cell population growth during phosphate starvation","type":"exact"},{"name":"sensitive to phosphate starvation","type":"related"},{"name":"slow vegetative cell population growth during phosphate starvation","type":"narrow"}],"termid":"FYPO:0004968"}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: RO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","termid":"RO:0002232"}


id: PBO:0074120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 5","termid":"PBO:0074120"}


id: PBO:0074225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 4","termid":"PBO:0074225"}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["GOC:mah","PMID:11416225","PMID:9792536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0005488","GO:0003674","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: PBO:0004821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS binding protein Abp2","termid":"PBO:0004821"}


id: PATO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a insect by virtue of the bearer's being in the chrysalis (cocoon) or post larval stage.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pupal","termid":"PATO:0001187"}


id: PBO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control (predicted)","termid":"PBO:0005330"}


id: GO:0016046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a fungus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of fungus","secondary_identifiers":["GO:0016047","GO:0009599"],"synonyms":[{"name":"detection of fungi","type":"exact"},{"name":"detection of parasitic fungi","type":"narrow"},{"name":"detection of parasitic fungus","type":"narrow"},{"name":"perception of fungi","type":"related"},{"name":"perception of fungus","type":"related"},{"name":"perception of parasitic fungi","type":"narrow"},{"name":"perception of parasitic fungus","type":"related"}],"termid":"GO:0016046"}


id: PBO:0091377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp70 family heat shock protein Ssa1","termid":"PBO:0091377"}


id: PBO:0058542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6088","termid":"PBO:0058542"}


id: GO:0106428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106428"}


id: PBO:0028478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_growing_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028478"}


id: PBO:0054201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1581","termid":"PBO:0054201"}


id: PATO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's being composed of more than one identifiable entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed","termid":"PATO:0002122"}


id: PBO:0049611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 14","termid":"PBO:0049611"}


id: FYPO:0001736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster transfer","termid":"FYPO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased iron-sulfur cluster transfer","synonyms":[{"name":"decreased iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"decreased iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"decreased iron-sulfur cluster transfer to ferredoxin","type":"narrow"},{"name":"decreased iron-sulphur cluster transfer","type":"exact"},{"name":"reduced iron-sulfur cluster transfer","type":"exact"}],"termid":"FYPO:0001736"}


id: PBO:0066207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22","termid":"PBO:0066207"}


id: PR:O13714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C14C4.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.07","synonyms":[{"name":"Spom972h-SPAC14C4.07","type":"exact"}],"termid":"PR:O13714"}


id: GO:0070195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that consists of two identical subunits and binds growth hormone.","definition_xrefs":["GOC:vk","GOC:BHF","PMID:11445442","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"growth hormone receptor complex","termid":"GO:0070195"}


id: GO:0015643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a toxic substance, a poisonous substance that causes damage to biological systems.","definition_xrefs":["GOC:pr","GOC:curators","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"toxic substance binding","synonyms":[{"name":"antitoxin activity","type":"related"},{"name":"lipoprotein antitoxin","type":"related"}],"termid":"GO:0015643"}


id: PBO:0040402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 3","termid":"PBO:0040402"}


id: PBO:0082624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation","termid":"PBO:0082624"}


id: FYECO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a low temperature followed by growth at standard temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, low to high","termid":"FYECO:0000293"}


id: GO:0052744
data:
  {"annotated_genes":["SJAG_00880","SJAG_02706","SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004438"},{"annotations":[73383,77175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol monophosphate + H2O = phosphatidylinositol + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null,"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol monophosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0052744","terms_by_termid":{"GO:0004438":null,"GO:0043812":null}}


id: GO:0035207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"negatively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte proliferation","synonyms":[{"name":"down regulation of hemocyte proliferation","type":"exact"},{"name":"down-regulation of hemocyte proliferation","type":"exact"},{"name":"downregulation of hemocyte proliferation","type":"exact"},{"name":"inhibition of hemocyte proliferation","type":"narrow"},{"name":"negative regulation of arthropod blood cell proliferation","type":"exact"}],"termid":"GO:0035207"}


id: GO:0051368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-threonine to form peptidyl-O3-octanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["PMID:11546772","RESID:AA0387","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-threonine octanoylation","secondary_identifiers":["RESID:AA0386"],"termid":"GO:0051368"}


id: GO:1901870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecgonone methyl ester.","definition_xrefs":["PMID:22665766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ecgonone methyl ester metabolic process","synonyms":[{"name":"ecgonone methyl ester metabolism","type":"exact"}],"termid":"GO:1901870"}


id: PBO:0087107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P1 beta; component of the ribosomal stalk, which is involved in interaction of translational elongation factors with ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087107"}


id: PBO:0028333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_methylglyoxal","termid":"PBO:0028333"}


id: PBO:0085822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels","termid":"PBO:0085822"}


id: GO:0016911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 4 activity (obsolete GO:0016911)","synonyms":[{"name":"SAP kinase 4 activity","type":"exact"},{"name":"SAPK4","type":"exact"}],"termid":"GO:0016911"}


id: GO:0002638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of immunoglobulin production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"negatively_regulates","term_name":"immunoglobulin production","termid":"GO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of immunoglobulin production","secondary_identifiers":["GO:0051025","GO:0002641"],"synonyms":[{"name":"down regulation of immunoglobulin production","type":"exact"},{"name":"down-regulation of immunoglobulin production","type":"exact"},{"name":"downregulation of immunoglobulin production","type":"exact"},{"name":"inhibition of immunoglobulin production","type":"narrow"},{"name":"negative regulation of immunoglobulin biosynthetic process","type":"narrow"},{"name":"negative regulation of immunoglobulin secretion","type":"narrow"}],"termid":"GO:0002638"}


id: PBO:0035729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_mating_type_locus_during_vegetative_growth","termid":"PBO:0035729"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: PBO:0029437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029437"}


id: PBO:0089391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation regulator, HEAT repeat protein Gcn1","termid":"PBO:0089391"}


id: GO:0016790
data:
  {"annotated_genes":["SJAG_00734","SJAG_00774","SJAG_01396","SJAG_01596","SJAG_02056","SJAG_04107","SJAG_02268","SJAG_02985","SJAG_04895","SJAG_04007","SJAG_03377","SJAG_02769","SJAG_00902"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87357,65082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003986"},{"annotations":[96966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016297"},{"annotations":[78863,92946,97888,103875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047617"},{"annotations":[73008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004416"},{"annotations":[105440,97170,70349,107403,89557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A.","definition_xrefs":["EC:3.1.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_00902":null,"SJAG_01396":null,"SJAG_01596":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03377":null,"SJAG_04007":null,"SJAG_04107":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiolester hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"thiolesterase activity","type":"exact"}],"termid":"GO:0016790","terms_by_termid":{"GO:0003986":null,"GO:0004416":null,"GO:0008474":null,"GO:0016297":null,"GO:0047617":null}}


id: GO:0006650
data:
  {"annotated_genes":["SJAG_02903","SJAG_03700","SJAG_04007","SJAG_04628","SJAG_04930","SJAG_04924","SJAG_02804","SJAG_01860","SJAG_03672","SJAG_04545","SJAG_04881","SJAG_03066","SJAG_02289","SJAG_05278","SJAG_03292","SJAG_05219","SJAG_00846","SJAG_02093","SJAG_04319","SJAG_05327","SJAG_01236","SJAG_01876","SJAG_00063","SJAG_03524","SJAG_00114","SJAG_04317","SJAG_03878","SJAG_00068","SJAG_06425","SJAG_04883","SJAG_06383","SJAG_03801","SJAG_02980","SJAG_04537","SJAG_02776","SJAG_00295","SJAG_01036","SJAG_00825","SJAG_04119","SJAG_05330","SJAG_01957","SJAG_02100","SJAG_02523","SJAG_00812","SJAG_00622","SJAG_04165","SJAG_00831","SJAG_03115","SJAG_03154","SJAG_01233","SJAG_03935","SJAG_00426","SJAG_01416","SJAG_00999","SJAG_02161","SJAG_03076","SJAG_02488","SJAG_04110","SJAG_01863","SJAG_03563","SJAG_01918","SJAG_02328","SJAG_00168","SJAG_01570","SJAG_01519","SJAG_02902","SJAG_03375","SJAG_00638","SJAG_03506","SJAG_02091","SJAG_01227","SJAG_00946","SJAG_00296","SJAG_03204","SJAG_02913","SJAG_01571","SJAG_04792","SJAG_04975","SJAG_04323","SJAG_04337"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70871,73997,110579,73968,87310],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[103873,70858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035965"},{"annotations":[114562,71507,89061,78646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[90710,105734,108522,100667,112431,84646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[116184,78645,109615,111314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[71359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[76261,71599,75612,93918,77365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[74260,100084,75500,76445,72785,76650,76989,112830,72930,71664,84778,85419,97849,89015,108119,75561,74831,71312,69997,111430,76747,76443,113938,74816,76431,103105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[72435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006505"},{"annotations":[89079,70857,92024,106377,71637,71445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[76986,92525,89080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[113689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[72984,77843,111315,92526,71042,100297,74860,115178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[71789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036149"},{"annotations":[75683,78674,96499,88596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[97183,106450,92025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046488"},{"annotations":[89244,87770,92826,115179,107634,87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[61659,63231,61469,71392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[111316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[73841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[97651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006658"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycerolipid metabolic 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id: GO:0070606
data:
  {"annotated_genes":["SJAG_00610","SJAG_04666","SJAG_00424","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85311,99122,88389,91009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-glucan biosynthetic process","termid":"GO:0032949"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"(1->3)-alpha-glucan biosynthetic process","termid":"GO:0070596"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of alpha-1,3 glucan anabolism","type":"exact"},{"name":"regulation of alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"regulation of alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"regulation of alpha-1,3 glucan formation","type":"exact"},{"name":"regulation of alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070606","terms_by_termid":{"GO:0070610":null}}


id: PBO:0056751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 2","termid":"PBO:0056751"}


id: FYPO:0004310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of mitotic M phase","secondary_identifiers":["FYPO:0005632"],"synonyms":[{"name":"normal duration of M phase of mitotic cell cycle","type":"exact"},{"name":"normal duration of mitosis","type":"related"},{"name":"normal duration of mitosis during vegetative growth","type":"related"},{"name":"normal duration of mitotic division","type":"related"},{"name":"normal duration of mitotic nuclear division","type":"related"}],"termid":"FYPO:0004310"}


id: FYECO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which methylamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ methylamine","termid":"FYECO:0000121"}


id: GO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031450"}


id: GO:0071330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"},{"relation_name":"is_a","term_name":"response to trehalose-6-phosphate","termid":"GO:0080094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trehalose-6-phosphate stimulus","termid":"GO:0071330"}


id: MOD:01982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["PubMed:23978223","PubMed:23818633","RESID:AA0619","ChEBI:17750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine","synonyms":[{"name":"(trimethylammonio)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N,N-trimethylmethanazanium","type":"exact"},{"name":"2-trimethylammonioacetate","type":"exact"},{"name":"MOD_RES N,N,N-trimethylglycine","type":"exact"},{"name":"N,N,N-trimethylglycine cation","type":"exact"},{"name":"N,N,N-trimethylglycinium","type":"exact"},{"name":"N2Me3+Gly","type":"exact"},{"name":"betaine","type":"exact"},{"name":"carboxy-N,N,N-trimethylmethanaminium","type":"exact"},{"name":"carboxymethyl-trimethylazanium","type":"exact"},{"name":"glycine betaine","type":"exact"}],"termid":"MOD:01982"}


id: PBO:0034664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cohesin_loading","termid":"PBO:0034664"}


id: FYPO:0001732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in vacuole","termid":"FYPO:0001602"},{"relation_name":"is_a","term_name":"decreased cellular glutamine level","termid":"FYPO:0001727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased vacuolar glutamine level","synonyms":[{"name":"decreased level of glutamine in vacuole","type":"exact"},{"name":"decreased vacuolar L-glutamine level","type":"exact"},{"name":"decreased vacuolar glutamine level during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar glutamine level during vegetative growth","type":"exact"},{"name":"reduced level of glutamine in vacuole","type":"exact"},{"name":"reduced vacuolar glutamine level","type":"exact"}],"termid":"FYPO:0001732"}


id: PBO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGA divergent transcript","termid":"PBO:0039022"}


id: PBO:0005239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor family (CBF/NF-Y)","termid":"PBO:0005239"}


id: PBO:0042678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein alpha","termid":"PBO:0042678"}


id: PBO:0108679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha/Beta hydrolase fold, DUF1749 family protein, implicated in siderophore metabolism","termid":"PBO:0108679"}


id: PBO:0086475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by homology; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086475"}


id: GO:0106153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone in which a residue has been modified by phosphorylation.","definition_xrefs":["GOC:mah","PMID:20679485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone binding","termid":"GO:0042393"},{"relation_name":"is_a","term_name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphorylated histone binding","termid":"GO:0106153"}


id: PBO:0042381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD247 molecule","termid":"PBO:0042381"}


id: GO:0047739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cephalosporin C + H2O = acetate + deacetylcephalosporin C + H+.","definition_xrefs":["EC:3.1.1.41","RHEA:22596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0019213","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cephalosporin-C deacetylase activity","secondary_identifiers":["KEGG_REACTION:R03062","MetaCyc:CEPHALOSPORIN-C-DEACETYLASE-RXN"],"synonyms":[{"name":"cephalosporin C acetyl-esterase activity","type":"related"},{"name":"cephalosporin C acetyl-hydrolase activity","type":"related"},{"name":"cephalosporin C acetylase activity","type":"related"},{"name":"cephalosporin C acetylesterase activity","type":"related"},{"name":"cephalosporin C deacetylase activity","type":"related"},{"name":"cephalosporin acetylesterase activity","type":"related"},{"name":"cephalosporin-C acetylhydrolase activity","type":"related"}],"termid":"GO:0047739"}


id: GO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a naive natural killer cell acquires the specialized features of an effector natural killer T cell as part of an immune response.","definition_xrefs":["PMID:11698225","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell differentiation","termid":"GO:0001779"},{"relation_name":"is_a","term_name":"natural killer cell activation involved in immune response","termid":"GO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell differentiation involved in immune response","synonyms":[{"name":"NK cell differentiation during immune response","type":"related"},{"name":"natural killer cell development involved in immune response","type":"related"},{"name":"natural killer cell differentiation during immune response","type":"related"}],"termid":"GO:0002325"}


id: GO:0042418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0198506732","ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"epinephrine metabolic process","termid":"GO:0042414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine biosynthetic process","synonyms":[{"name":"adrenaline biosynthesis","type":"exact"},{"name":"adrenaline biosynthetic process","type":"exact"},{"name":"epinephrine anabolism","type":"exact"},{"name":"epinephrine biosynthesis","type":"exact"},{"name":"epinephrine formation","type":"exact"},{"name":"epinephrine synthesis","type":"exact"}],"termid":"GO:0042418"}


id: PBO:0039096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase like 2","termid":"PBO:0039096"}


id: GO:0099111
data:
  {"annotated_genes":["SJAG_00108","SJAG_04003","SJAG_02561","SJAG_01613","SJAG_05266","SJAG_01546","SJAG_03540","SJAG_00140","SJAG_01508","SJAG_01662","SJAG_02286","SJAG_02453","SJAG_00397","SJAG_02737","SJAG_01929","SJAG_00851","SJAG_01211","SJAG_02731","SJAG_02336","SJAG_05220","SJAG_02431","SJAG_02045","SJAG_01371","SJAG_03073","SJAG_04387","SJAG_03673","SJAG_02040","SJAG_05319","SJAG_04597","SJAG_00918","SJAG_01775","SJAG_00368","SJAG_05185","SJAG_04143","SJAG_02509","SJAG_01297","SJAG_03835","SJAG_02761","SJAG_01863","SJAG_01370","SJAG_04001","SJAG_01224","SJAG_00332","SJAG_03437","SJAG_00113"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84753,90236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048490"},{"annotations":[87298,87769,93723,107548,86903,99546,107917,96946,83566,110584,113655,91288,99244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[107728,102972],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[97671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"},{"annotations":[113317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047497"},{"annotations":[106073,110586,97680,70861,103829,113659,74405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[93800,95426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[87300,84427,91291,93725,83570,95427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072384"},{"annotations":[90466],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[100060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[100221,115383,104700,96602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[86891,105326,106355,96732,110729,103906,85624,85002,113630,94798,92902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[83571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008090"},{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["GOC:cjm","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01508":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_01929":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02453":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"microtubule-based transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099111","terms_by_termid":{"GO:0000743":null,"GO:0008090":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0047497":null,"GO:0048490":null,"GO:0072384":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1903563":null,"GO:1990976":null}}


id: PBO:0068660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 41, pseudogene","termid":"PBO:0068660"}


id: PBO:0005723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup186","termid":"PBO:0005723"}


id: SO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA modification.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_modification","termid":"SO:0000894"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_modification","synonyms":[{"name":"gene silenced by DNA modification","type":"exact"}],"termid":"SO:0000128"}


id: FYPO:0003789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased frequency of meiosis","termid":"FYPO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of meiosis II","synonyms":[{"name":"decreased frequency of second meiotic nuclear division","type":"exact"},{"name":"decreased meiosis II","type":"exact"},{"name":"meiosis II: decreased frequency","type":"exact"},{"name":"reduced frequency of meiosis II","type":"exact"}],"termid":"FYPO:0003789"}


id: PATO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being unseparated into parts or divisions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undivided","synonyms":[{"name":"unseparated","type":"related"}],"termid":"PATO:0002034"}


id: PBO:0046216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 9","termid":"PBO:0046216"}


id: PBO:0057852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3163","termid":"PBO:0057852"}


id: GO:0071320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cAMP","termid":"GO:0051591"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cAMP","synonyms":[{"name":"cellular response to 3',5' cAMP","type":"exact"},{"name":"cellular response to 3',5'-cAMP","type":"exact"},{"name":"cellular response to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to cyclic AMP","type":"exact"}],"termid":"GO:0071320"}


id: GO:0140634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of CARD8 and CASP1.","definition_xrefs":["PMID:33420033","PMID:33542150","PMID:33420028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"CARD8 inflammasome complex","termid":"GO:0140634"}


id: PBO:0062319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 1","termid":"PBO:0062319"}


id: GO:0098980
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense specialization of the presynaptic active zone cytoskeleton.","definition_xrefs":["GOC:dos","PMID:26780543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton of presynaptic active zone","termid":"GO:0048788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"presynaptic density","termid":"GO:0098980"}


id: PR:Q09886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug42 gene.","definition_xrefs":["UniProtKB:Q09886","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 42 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.12","synonyms":[{"name":"Spom972h-mug42","type":"exact"}],"termid":"PR:Q09886"}


id: PBO:0074325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1","termid":"PBO:0074325"}


id: PBO:0047251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 239 member B","termid":"PBO:0047251"}


id: PBO:0029008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleoplasm","termid":"PBO:0029008"}


id: GO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"myosin VI light chain binding","termid":"GO:0070856"}


id: PBO:0034681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0034681"}


id: GO:1900934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene metabolic process","termid":"GO:1900932"},{"relation_name":"positively_regulates","term_name":"nonadec-1-ene metabolic process","termid":"GO:1900876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nonadec-1-ene metabolic process","synonyms":[{"name":"activation of nonadec-1-ene metabolic process","type":"narrow"},{"name":"activation of nonadec-1-ene metabolism","type":"exact"},{"name":"positive regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"up-regulation of nonadec-1-ene metabolism","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolic process","type":"exact"},{"name":"upregulation of nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900934"}


id: PBO:0080074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP37 pseudogene 1","termid":"PBO:0080074"}


id: PBO:0086096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be associated with the nuclear pore complex; null mutant is viable, displays elevated frequency of mitochondrial genome loss and is sensitive to freeze-thaw stress","termid":"PBO:0086096"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: GO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"RNA transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-203906"],"termid":"GO:0051033"}


id: PBO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 1","termid":"PBO:0052590"}


id: PBO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Grt1 (predicted)","termid":"PBO:0003028"}


id: FYPO:0003481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated, and in which mitosis begins when the cell is longer than normal.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"output_of","term_name":"mitotic G2/M phase transition delay","termid":"FYPO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000004","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable elongated vegetative cell, elongated upon mitotic entry","synonyms":[{"name":"viable elongated vegetative cell with entry into mitosis at increased length","type":"exact"},{"name":"viable elongated vegetative cell with mitotic entry at increased length","type":"exact"},{"name":"viable elongated vegetative cell, elongated upon entry into mitosis","type":"exact"}],"termid":"FYPO:0003481"}


id: PBO:0089752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription elongation factor TFIIS","termid":"PBO:0089752"}


id: PBO:0088371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring-membrane anchor Fic1","termid":"PBO:0088371"}


id: PR:O43029
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-methyl-L-tryptophan oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02514","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pipecolate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.15","secondary_identifiers":["UniProtKB:O43029"],"synonyms":[{"name":"L-pipecolic acid oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-solA","type":"exact"}],"termid":"PR:O43029"}


id: GO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a cranial ganglion is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion morphogenesis","termid":"GO:0061552"},{"relation_name":"part_of","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion morphogenesis","synonyms":[{"name":"cranial ganglia morphogenesis","type":"related"}],"termid":"GO:0061559"}


id: PR:P23880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.05c","synonyms":[{"name":"Spom972h-sds21","type":"exact"},{"name":"suppressor protein SDS21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23880"}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["RHEA:50192","MetaCyc:2.4.2.26-RXN","Reactome:R-HSA-1878002"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: GO:0052904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(1)-acetylspermidine + O2 = 3-acetamidopropanal + H2O2 + putrescine.","definition_xrefs":["RHEA:25812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N1-acetylspermidine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity","secondary_identifiers":["Reactome:R-HSA-141351","EC:1.5.3.17","KEGG_REACTION:R09074","EC:1.5.3.13","MetaCyc:RXN-12091","Reactome:R-HSA-141348"],"synonyms":[{"name":"N(1)-acetylpolyamine oxidase activity","type":"broad"},{"name":"non-specific polyamine oxidase activity","type":"broad"},{"name":"polyamine oxidase activity","type":"broad"}],"termid":"GO:0052904"}


id: GO:0010258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form NADH:plastoquinone dehydrogenase complex, which is involved in the non-photochemical reduction of plastoquinones, as well as the cyclic electron transport around photosystem I.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"NAD(P)H dehydrogenase complex assembly","termid":"GO:0010275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"NADH dehydrogenase complex (plastoquinone) assembly","termid":"GO:0010258"}


id: MOD:00295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-octanoyl-L-serine.","definition_xrefs":["Unimod:426#S","PubMed:12716131","PubMed:10604470","RESID:AA0290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-octanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)propanoic acid","type":"exact"},{"name":"L-serine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl serine","type":"exact"},{"name":"O-octanoyl-L-serine","type":"exact"},{"name":"O-octanoylated L-serine","type":"exact"},{"name":"O3-octanoyl-L-serine","type":"exact"},{"name":"OOctSer","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00295"}


id: GO:0002054
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to a nucleobase, any of a class of pyrmidines or purines, organic nitrogenous bases.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleobase binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0002054","terms_by_termid":{"GO:0002055":null}}


id: PBO:0088204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn2-Cys6 zinc-finger transcription factor; activates genes involved in multidrug resistance; paralog of Yrm1p, acting on an overlapping set of target genes; YRR1 has a paralog, PDR8, that arose from the whole genome duplication","termid":"PBO:0088204"}


id: PBO:0075595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 2","termid":"PBO:0075595"}


id: PBO:0073522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 5","termid":"PBO:0073522"}


id: PBO:0069598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 875, pseudogene","termid":"PBO:0069598"}


id: GO:0098763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic cell cycle phase","termid":"GO:0098763"}


id: FYPO:0006962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-N-acetylglucosamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular UDP-N-acetylglucosamine level","synonyms":[{"name":"increased UDP-N-acetylglucosamine accumulation","type":"related"},{"name":"increased cellular UDP-N-acetyl-alpha-D-glucosamine level","type":"exact"},{"name":"increased cellular UDP-N-acetylglucosamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular UDP-N-acetylglucosamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006962"}


id: PBO:0043267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 34","termid":"PBO:0043267"}


id: PBO:0017058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces pombe specific protein, similar to a region of alpha-galactosidase","termid":"PBO:0017058"}


id: PBO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor A subunit Ssb1","termid":"PBO:0003087"}


id: PBO:0083820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5","termid":"PBO:0083820"}


id: PBO:0083806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that forms a dimer with Ntr2p; also forms a trimer, with Ntr2p and Prp43p, that is involved in spliceosome disassembly; found also in a multisubunit complex with the splicing factor Clf1p; suppressor of prp38-1 mutation","termid":"PBO:0083806"}


id: GO:0018671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.14.13.33-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate 3-monooxygenase (reduced nicotinamide adenine dinucleotide (phosphate))","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"4-hydroxybenzoate-3-hydroxylase activity","type":"related"}],"termid":"GO:0018671"}


id: PBO:0082938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates protein sorting and deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes","termid":"PBO:0082938"}


id: PATO:0001216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001216 volume_unit (obsolete PATO:0001216)","termid":"PATO:0001216"}


id: GO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing margin morphogenesis","synonyms":[{"name":"wing margin morphogenesis","type":"exact"}],"termid":"GO:0008587"}


id: SO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 2nd residue (an arginine), from the start of the H3 protein is di-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3R2_dimethylation_site","synonyms":[{"name":"H3R2 dimethylation site","type":"exact"},{"name":"H3R2me2","type":"exact"}],"termid":"SO:0001948"}


id: GO:0098031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small disk located at the base of some icosahedral virus capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar","termid":"GO:0098031"}


id: PBO:0060897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEURL1 antisense RNA 1","termid":"PBO:0060897"}


id: PBO:0063980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 14","termid":"PBO:0063980"}


id: GO:1900357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nigerotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nigerotriose transport","termid":"GO:2001091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of nigerotriose transport","termid":"GO:1900357"}


id: GO:1904756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of gut granule assembly","termid":"GO:1904755"},{"relation_name":"negatively_regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of gut granule assembly","synonyms":[{"name":"down regulation of gut granule assembly","type":"exact"},{"name":"down regulation of gut granule biogenesis","type":"exact"},{"name":"down regulation of gut granule formation","type":"exact"},{"name":"down-regulation of gut granule assembly","type":"exact"},{"name":"down-regulation of gut granule biogenesis","type":"exact"},{"name":"down-regulation of gut granule formation","type":"exact"},{"name":"downregulation of gut granule assembly","type":"exact"},{"name":"downregulation of gut granule biogenesis","type":"exact"},{"name":"downregulation of gut granule formation","type":"exact"},{"name":"inhibition of gut granule assembly","type":"narrow"},{"name":"inhibition of gut granule biogenesis","type":"narrow"},{"name":"inhibition of gut granule formation","type":"narrow"},{"name":"negative regulation of gut granule biogenesis","type":"exact"},{"name":"negative regulation of gut granule formation","type":"exact"}],"termid":"GO:1904756"}


id: PBO:0045316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 1","termid":"PBO:0045316"}


id: PBO:0090906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3","termid":"PBO:0090906"}


id: GO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The resumption of the Saccharomyces mitotic cell division cycle by pheromone-arrested cells that have not mated.","definition_xrefs":["GOC:krc","PMID:9927449"],"gene_count":0,"genotype_count":0,"name":"obsolete re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces) (obsolete GO:0046615)","synonyms":[{"name":"re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046615"}


id: GO:0106018
data:
  {"annotated_genes":["SJAG_02289","SJAG_00063","SJAG_03248","SJAG_04545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87408],"is_not":false,"summary":null,"term":"GO:0106018"},{"annotations":[73255,73396,74427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043813"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol phosphate + phosphate.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate phosphatase activity","termid":"GO:0034593"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_02289":null,"SJAG_03248":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0106018","terms_by_termid":{"GO:0043813":null,"GO:0106018":null}}


id: PBO:0082988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aspartate aminotransferase involved in nitrogen metabolism; localizes to peroxisomes in oleate-grown cells","termid":"PBO:0082988"}


id: PR:Q9USR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA excision repair protein ERCC-8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR22850:SF2","OMA:SCHPO02583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA excision repair protein ckn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.09","secondary_identifiers":["UniProtKB:Q9USR0"],"synonyms":[{"name":"Spom972h-ERCC8","type":"exact"}],"termid":"PR:Q9USR0"}


id: GO:0097387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Simple or compound process of epithelial glial cells with a spherical head that inserts into photoreceptor axons. Capitate projections have only been observed in Brachycera (flies).","definition_xrefs":["GOC:mc","PMID:3098431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"capitate projection","termid":"GO:0097387"}


id: PBO:0084808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; identified based on homology to the filamentous fungus, <i>Ashbya gossypii</i>; SWAT-GFP and seamless-GFP fusion proteins localize to the mitochondria","termid":"PBO:0084808"}


id: PBO:0041282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF7 antisense RNA 1","termid":"PBO:0041282"}


id: PBO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter (predicted)","termid":"PBO:0002488"}


id: PBO:0083212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF URA7; identified by expression profiling and mass spectrometry","termid":"PBO:0083212"}


id: PR:O74994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring assembly protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.04c","synonyms":[{"name":"Spom972h-rng3","type":"exact"}],"termid":"PR:O74994"}


id: FYPO:0001449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular trehalose level","synonyms":[{"name":"normal cellular trehalose accumulation","type":"related"},{"name":"normal cellular trehalose level during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during vegetative growth","type":"exact"}],"termid":"FYPO:0001449"}


id: PBO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 38","termid":"PBO:0070808"}


id: GO:1903156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any guanine transmembrane transporter activity that is involved in guanine import into cell.","definition_xrefs":["GO_REF:0000061","ISBN:0-8249-3695-6","GOC:TermGenie","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine transmembrane transporter activity involved in guanine import into cell (obsolete GO:1903156)","synonyms":[{"name":"guanine transmembrane transporter activity involved in guanine import into cell","type":"exact"}],"termid":"GO:1903156"}


id: PATO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches branching into a reticulum toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulodromous","termid":"PATO:0001972"}


id: PBO:0059822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 2","termid":"PBO:0059822"}


id: PBO:0083103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase encoded within the telomeric Y' element; Y' -helicase protein 1","termid":"PBO:0083103"}


id: PBO:0088505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-3) methyltransferase Trm140","termid":"PBO:0088505"}


id: PBO:0087067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33A; N-terminally acetylated; rpl33a null mutant exhibits slow growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33A has a paralog, RPL33B, that arose from the whole genome duplication","termid":"PBO:0087067"}


id: GO:0050021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinono-1,4-lactone + H2O = L-arabinonate + H+.","definition_xrefs":["RHEA:16217","EC:3.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"L-arabinonolactonase activity","secondary_identifiers":["KEGG_REACTION:R02526","MetaCyc:L-ARABINONOLACTONASE-RXN"],"synonyms":[{"name":"L-arabinono-1,4-lactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050021"}


id: MOD:00173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to N-threonyl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["RESID:AA0164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPIThr","type":"exact"},{"name":"LIPID GPI-anchor amidated threonine","type":"exact"},{"name":"N-threonyl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00173"}


id: PBO:0046834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 7","termid":"PBO:0046834"}


id: PBO:0062517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 3 (gene/pseudogene)","termid":"PBO:0062517"}


id: GO:1903722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of centriole elongation.","definition_xrefs":["GOC:als","PMID:20616062","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of centriole elongation","termid":"GO:1903722"}


id: PBO:0029816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape","termid":"PBO:0029816"}


id: GO:0017133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mitochondrial electron transfer flavoprotein complex","termid":"GO:0017133"}


id: PR:O42645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A secretion-regulating guanine nucleotide exchange factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 repeat-containing protein C10F6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.04","secondary_identifiers":["UniProtKB:O42645"],"synonyms":[{"name":"Spom972h-SERGEF","type":"exact"}],"termid":"PR:O42645"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: GO:0039525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus effects a change in the organization of chromatin in the host.","definition_xrefs":["PMID:11483770","GOC:sp","PMID:16687403","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host process","termid":"GO:0019048"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"modulation by virus of host chromatin organization","synonyms":[{"name":"modulation by virus of host chromatin organisation","type":"exact"},{"name":"modulation of host chromatin by virus","type":"exact"},{"name":"modulation of host chromatin structure by virus","type":"exact"},{"name":"regulation by virus of host chromatin organization","type":"related"}],"termid":"GO:0039525"}


id: PBO:0076579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 7","termid":"PBO:0076579"}


id: PBO:0090494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex WD repeat subunit Crb3","termid":"PBO:0090494"}


id: PBO:0029818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_without_cell_division_(obsolete_FYPO:0002419)","termid":"PBO:0029818"}


id: GO:0034833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylate + CoASH = trans-geranyl-CoA + OH-.","definition_xrefs":["UM-BBD_reactionID:r1165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"geranylate CoA-transferase activity","termid":"GO:0034833"}


id: PBO:0056752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 3","termid":"PBO:0056752"}


id: PBO:0081422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF277 antisense RNA 1","termid":"PBO:0081422"}


id: PBO:0073196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin P","termid":"PBO:0073196"}


id: GO:0000785
data:
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id: GO:0046666
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id: PBO:0074254
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id: PBO:0088434
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id: GO:0009039
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id: PBO:0078241
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id: MOD:00348
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id: GO:0001618
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id: PBO:0090305
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id: FYPO:0003609
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id: GO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of different species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb","GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-species biofilm formation","secondary_identifiers":["GO:0044401","GO:0090607","GO:0044400","GO:0090608"],"synonyms":[{"name":"multi-species biofilm formation in or on host organism","type":"narrow"},{"name":"multi-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"multi-species submerged biofilm formation","type":"narrow"},{"name":"multi-species surface biofilm formation","type":"related"}],"termid":"GO:0044399"}


id: MOD:00498
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen of a residue with a fluorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorinated residue","synonyms":[{"name":"FRes","type":"exact"},{"name":"Fluoro","type":"related"},{"name":"Fluorophenylalanyl","type":"exact"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"}],"termid":"MOD:00498"}


id: PBO:0055228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2654","termid":"PBO:0055228"}


id: PBO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXW7 antisense RNA 1","termid":"PBO:0047416"}


id: PBO:0051759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 5","termid":"PBO:0051759"}


id: GO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lens are generated and organized. The lens is a transparent structure in the eye through which light is focused onto the retina. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens morphogenesis in camera-type eye","synonyms":[{"name":"lens morphogenesis","type":"exact"},{"name":"lens morphogenesis in camera-style eye","type":"exact"}],"termid":"GO:0002089"}


id: FYPO:0006153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at a STREP motif by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished DNA binding","termid":"FYPO:0000659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA binding at STREP motif","synonyms":[{"name":"DNA binding at STREP motif abolished","type":"exact"},{"name":"STREP motif binding abolished","type":"exact"},{"name":"abolished DNA binding at stress-starvation response element of Schizosaccharomyces pombe","type":"exact"}],"termid":"FYPO:0006153"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: GO:0009914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hormones into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"hormone transport","termid":"GO:0009914"}


id: PBO:0058942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 1","termid":"PBO:0058942"}


id: PBO:0075191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 3","termid":"PBO:0075191"}


id: GO:0046587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"},{"relation_name":"positively_regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-dependent cell-cell adhesion","synonyms":[{"name":"activation of calcium-dependent cell-cell adhesion","type":"narrow"},{"name":"stimulation of calcium-dependent cell-cell adhesion","type":"narrow"},{"name":"up regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"up-regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"upregulation of calcium-dependent cell-cell adhesion","type":"exact"}],"termid":"GO:0046587"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: GO:0033945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cellobiose from the reducing end of xyloglucans consisting of a beta-(1->4) linked glucan carrying alpha-D-xylosyl groups on O-6 of the glucose residues. To be a substrate, the first residue must be unsubstituted, the second residue may bear a xylosyl group, whether further glycosylated or not, and the third residue, which becomes the new terminus by the action of the enzyme, is preferably xylosylated, but this xylose residue must not be further substituted.","definition_xrefs":["EC:3.2.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"oligoxyloglucan reducing-end-specific cellobiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.150-RXN"],"synonyms":[{"name":"oligoxyloglucan reducing end-specific cellobiohydrolase activity","type":"related"},{"name":"oligoxyloglucan reducing-end cellobiohydrolase activity","type":"related"}],"termid":"GO:0033945"}


id: PBO:0036313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase-activating protein Spa2","termid":"PBO:0036313"}


id: PBO:0041957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle and apoptosis regulator 1","termid":"PBO:0041957"}


id: SO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the enhancer region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_binding_site","synonyms":[{"name":"enhancer binding site","type":"related"}],"termid":"SO:0001461"}


id: PBO:0075459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA8 antisense RNA 1 (head to head)","termid":"PBO:0075459"}


id: PATO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compositional quality inhering in an bearer by virtue of the bearer's quantities or relative ratios of amylose of the inhering entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylose composition","synonyms":[{"name":"amylose compositionality","type":"exact"}],"termid":"PATO:0001539"}


id: GO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyguanosine + ATP = ADP + dGMP + 2 H+.","definition_xrefs":["RHEA:19201","EC:2.7.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"deoxyguanosine kinase activity","secondary_identifiers":["KEGG_REACTION:R01967","MetaCyc:DEOXYGUANOSINE-KINASE-RXN"],"synonyms":[{"name":"(dihydroxypropoxymethyl)guanine kinase activity","type":"related"},{"name":"2'-deoxyguanosine kinase activity","type":"related"},{"name":"ATP:deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"NTP-deoxyguanosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyguanosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004138"}


id: FYPO:0002138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA catabolic process during vegetative growth","synonyms":[{"name":"increased RNA breakdown during vegetative growth","type":"exact"},{"name":"increased RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"increased RNA catabolism during vegetative growth","type":"exact"},{"name":"increased RNA degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0002138"}


id: MOD:01952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-threonine residue and an L-glutamine residue with an ester bond releasing ammonia to form O-(L-isoglutamyl)-L-threonine.","definition_xrefs":["RESID:AA0536#TQX","PubMed:17051152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-threonine","termid":"MOD:01979"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-threonine (Gln-Thr)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01952"}


id: PBO:0059348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S14","termid":"PBO:0059348"}


id: PBO:0090791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub3","termid":"PBO:0090791"}


id: PBO:0028734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_L-selenoneine_level_during_vegetative_growth","termid":"PBO:0028734"}


id: GO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.","definition_xrefs":["GOC:kmv","PMID:17113380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pole plasm","synonyms":[{"name":"germ plasm","type":"narrow"},{"name":"polar plasm","type":"exact"}],"termid":"GO:0045495"}


id: FYPO:0002204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that each contain one or more septa, and in which the cell diameter is larger than normal and the cell length is shorter than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, stubby septated cells (obsolete FYPO:0002204)","synonyms":[{"name":"inviable microcolony, stubby septated vegetative cells","type":"exact"}],"termid":"FYPO:0002204"}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: PBO:0062922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P2Y receptor family member 10","termid":"PBO:0062922"}


id: FYPO:0000716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to valinomycin. Cells stop growing (and may die) at a concentration of valinomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to valinomycin","synonyms":[{"name":"hypersensitive to valinomycin","type":"exact"},{"name":"sensitive to valinomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to valinomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000716"}


id: GO:0009585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"part_of","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"red, far-red light phototransduction","synonyms":[{"name":"phytochrome signaling pathway","type":"broad"},{"name":"red-sensitive opsin","type":"related"}],"termid":"GO:0009585"}


id: GO:0047930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosaminate = 2-dehydro-3-deoxy-D-gluconate + NH3.","definition_xrefs":["MetaCyc:GLUCOSAMINATE-AMMONIA-LYASE-RXN","EC:4.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"glucosaminate ammonia-lyase activity","secondary_identifiers":["GO:0050443","RHEA:12488","MetaCyc:4.3.1.21-RXN"],"synonyms":[{"name":"2-amino-2-deoxy-D-gluconate ammonia-lyase activity","type":"related"},{"name":"2-amino-2-deoxy-D-gluconate hydro-lyase (deaminating) activity","type":"related"},{"name":"D-glucosaminate ammonia-lyase (isomerizing; 2-dehydro-3-deoxy-D-gluconate-forming)","type":"related"},{"name":"D-glucosaminate ammonia-lyase activity","type":"related"},{"name":"D-glucosaminate dehydratase activity","type":"related"},{"name":"D-glucosaminic acid dehydrase activity","type":"related"},{"name":"acetylenemonocarboxylic acid hydrase activity","type":"related"},{"name":"aminodeoxygluconate ammonia-lyase activity","type":"exact"},{"name":"aminodeoxygluconate dehydratase activity","type":"exact"},{"name":"glucosaminic dehydrase activity","type":"related"}],"termid":"GO:0047930"}


id: PR:Q09094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec15 gene.","definition_xrefs":["UniProtKB:Q09094","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.14","synonyms":[{"name":"Spom972h-rec15","type":"exact"}],"termid":"PR:Q09094"}


id: PBO:0040604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2, pseudogene","termid":"PBO:0040604"}


id: PBO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 25","termid":"PBO:0072094"}


id: MOD:00779
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00130. Remap to MOD:00130.","definition_xrefs":["DeltaMass:352","PubMed:5529814","PubMed:5337886","Unimod:352","PubMed:11332453","PubMed:358196"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00779 lysine oxidation to aminoadipic semialdehyde (obsolete MOD:00779)","synonyms":[{"name":"Oxidation of lysine (to aminoadipic semialdehyde)","type":"exact"}],"termid":"MOD:00779"}


id: PBO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOLC1 pseudogene 1","termid":"PBO:0061223"}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: GO:0051649
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id: GO:0015718
data:
  {"annotated_genes":["SJAG_01505","SJAG_00276","SJAG_00671","SJAG_01960","SJAG_04905","SJAG_05175","SJAG_02779","SJAG_01924","SJAG_04593","SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[88004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[88452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[84245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[75954,90446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"},{"annotations":[72265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[75689,89367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[94872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"},{"annotations":[85813],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The directed movement of monocarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00671":null,"SJAG_01505":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02779":null,"SJAG_04593":null,"SJAG_04905":null,"SJAG_04920":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"monocarboxylic acid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015718","terms_by_termid":{"GO:0006847":null,"GO:0006850":null,"GO:0035432":null,"GO:0098717":null,"GO:0140270":null,"GO:1905135":null,"GO:1905136":null,"GO:1990536":null,"GO:1990556":null}}


id: PATO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000534 p h sensitivity value (obsolete PATO:0000534)","termid":"PATO:0000534"}


id: PBO:0052958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine aminotransferase 1","termid":"PBO:0052958"}


id: PBO:0036459
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript","termid":"PBO:0036459"}


id: PBO:0082062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyaspartate dehydratase; deaminates L-threo-3-hydroxyaspartate to form oxaloacetate and ammonia; required in the presence of hydroxyaspartate; highly similar to mouse serine racemase (Srr) but has no serine racemase activity","termid":"PBO:0082062"}


id: FYPO:0001668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is normal (i.e. indistinguishable from wild type). Protein processing is any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["PomBase:mah","GO:0016485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein processing during vegetative growth","synonyms":[{"name":"normal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001668"}


id: PBO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 49 pseudogene","termid":"PBO:0070135"}


id: PBO:0051946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPK1 pseudogene 1","termid":"PBO:0051946"}


id: PBO:0110475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETFRF1 pseudogene 1","termid":"PBO:0110475"}


id: GO:1901967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to iron ion starvation.","definition_xrefs":["GOC:TermGenie","PMID:23115244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"regulation of cellular response to iron ion starvation","termid":"GO:1901966"},{"relation_name":"negatively_regulates","term_name":"cellular response to iron ion starvation","termid":"GO:0010106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to iron ion starvation","synonyms":[{"name":"down regulation of cellular response to iron ion starvation","type":"exact"},{"name":"down-regulation of cellular response to iron ion starvation","type":"exact"},{"name":"downregulation of cellular response to iron ion starvation","type":"exact"},{"name":"inhibition of cellular response to iron ion starvation","type":"narrow"}],"termid":"GO:1901967"}


id: GO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["GOC:txnOH","GOC:jl","Wikipedia:Anti-sigma_factors"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription corepressor activity","termid":"GO:0003714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0003714"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003714","GO:0030674","GO:0140110","GO:0003674","GO:0003712"],"is_obsolete":false,"name":"sigma factor antagonist activity","synonyms":[{"name":"anti-sigma factor activity","type":"exact"}],"termid":"GO:0016989"}


id: PBO:0056373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 1","termid":"PBO:0056373"}


id: PBO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_metabolic_process","termid":"PBO:0030985"}


id: FYPO:0001292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CDP-diacylglycerol-serine O-phosphatidyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal CDP-diacylglycerol-serine O-phosphatidyltransferase activity","termid":"FYPO:0001291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"reduced CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"}],"termid":"FYPO:0001292"}


id: FYPO:0004097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal actomyosin contractile ring contraction","synonyms":[{"name":"normal actomyosin contractile ring constriction","type":"exact"},{"name":"normal actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal contractile ring contraction","type":"exact"},{"name":"normal cytokinetic contractile ring contraction","type":"exact"},{"name":"normal mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004097"}


id: GO:0003391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an amphid sensory organ's neuronal dendrite over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"},{"relation_name":"part_of","term_name":"neuron development involved in amphid sensory organ development","termid":"GO:0003388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}


id: PBO:0083051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol acyltransferase; catalyzes the terminal step of triacylglycerol (TAG) formation, acylates diacylglycerol using acyl-CoA as an acyl donor; Lro1p and Dga1p can O-acylate ceramides; localized to lipid particles","termid":"PBO:0083051"}


id: GO:0014052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"regulation of GABA secretion","type":"exact"}],"termid":"GO:0014052"}


id: PBO:0005803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit YmL33 (predicted)","termid":"PBO:0005803"}


id: GO:1901512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(-)-microperfuranone biosynthetic process","synonyms":[{"name":"(-)-microperfuranone anabolism","type":"exact"},{"name":"(-)-microperfuranone biosynthesis","type":"exact"},{"name":"(-)-microperfuranone formation","type":"exact"},{"name":"(-)-microperfuranone synthesis","type":"exact"}],"termid":"GO:1901512"}


id: PBO:0084363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker protein responsible for recruitment of myosin to the bud neck; interacts with the C-terminal extensions of septins Cdc11p and Shs1p and binds Myo1p to promote cytokinesis","termid":"PBO:0084363"}


id: GO:0052629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate + 2 H+.","definition_xrefs":["RHEA:39019","PMID:19901554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol-3,5-bisphosphate phosphatase activity","termid":"GO:0106018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1676105","Reactome:R-HSA-1676065","EC:3.1.3.95","Reactome:R-HSA-6809778","MetaCyc:RXN-10958","Reactome:R-HSA-6809320","Reactome:R-HSA-1676203","Reactome:R-HSA-6809944"],"termid":"GO:0052629"}


id: PBO:0042704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 3","termid":"PBO:0042704"}


id: PBO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn5","termid":"PBO:0001871"}


id: GO:0018775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxymuconate semialdehyde + H2O = formate + 2-oxopent-4-enoate.","definition_xrefs":["EC:3.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-hydroxymuconate-semialdehyde hydrolase activity","secondary_identifiers":["UM-BBD_enzymeID:e0139","MetaCyc:3.7.1.9-RXN","RHEA:14549"],"synonyms":[{"name":"2-hydroxymuconate-semialdehyde formylhydrolase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde hydrolase activity","type":"related"},{"name":"HMSH","type":"related"},{"name":"HOD hydrolase activity","type":"related"}],"termid":"GO:0018775"}


id: GO:0072710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyurea stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroxyurea","synonyms":[{"name":"response to HU","type":"exact"}],"termid":"GO:0072710"}


id: PBO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 36","termid":"PBO:0080072"}


id: GO:0160121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 3-acyl-sn-glycero-1-phospho-(1'-sn-glycerol) = 3-acyl-sn-glycero-1-phospho-(3'-acyl-1'-sn-glycerol) + sn-glycero-1-phospho-(1'-sn-glycerol).","definition_xrefs":["PMID:37708259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"bis(monoacylglycero)phosphate synthase activity","termid":"GO:0160121"}


id: GO:0033982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate 6-phosphate + H+ = L-xylulose 5-phosphate + CO2.","definition_xrefs":["EC:4.1.1.85","RHEA:14353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-dehydro-L-gulonate-6-phosphate decarboxylase activity","secondary_identifiers":["MetaCyc:RXN0-705","KEGG_REACTION:R07125"],"synonyms":[{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase (L-xylulose-5-phosphate-forming) activity","type":"related"},{"name":"3-dehydro-L-gulonate-6-phosphate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate 6-phosphate decarboxylase activity","type":"related"},{"name":"KGPDC","type":"related"},{"name":"SgaH","type":"related"},{"name":"SgbH","type":"related"},{"name":"UlaD","type":"related"}],"termid":"GO:0033982"}


id: GO:0051220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective interaction of a protein with specific molecules in the cytoplasm, thereby inhibiting its transport into other areas of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location","termid":"GO:0045185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytoplasmic sequestering of protein","synonyms":[{"name":"cytoplasmic retention of protein","type":"exact"},{"name":"cytoplasmic sequestration of protein","type":"exact"},{"name":"cytoplasmic storage of protein","type":"exact"},{"name":"maintenance of protein location in cytoplasm","type":"exact"},{"name":"retention of protein in cytoplasm","type":"exact"},{"name":"sequestering of protein in cytoplasm","type":"exact"},{"name":"sequestration of protein in cytoplasm","type":"exact"},{"name":"storage of protein in cytoplasm","type":"exact"}],"termid":"GO:0051220"}


id: GO:0035278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs.","definition_xrefs":["PMID:14744438","PMID:15196554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"miRNA mediated inhibition of translation","type":"exact"},{"name":"miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035278"}


id: PBO:0063562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline, glutamate and leucine rich protein 1","termid":"PBO:0063562"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: PBO:0040571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 5","termid":"PBO:0040571"}


id: PBO:0074830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 26","termid":"PBO:0074830"}


id: GO:0055064
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102059],"is_not":false,"summary":null,"term":"GO:0055064"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of chloride ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"chloride ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055064","terms_by_termid":{"GO:0055064":null}}


id: GO:0033207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming a beta-1,4 linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"beta-1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"beta-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0033207"}


id: SO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The paternal copy of the gene is modified, rendering it transcriptionally silent.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_imprinted","termid":"SO:0000134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally_imprinted","synonyms":[{"name":"paternally imprinted","type":"exact"}],"termid":"SO:0000136"}


id: PBO:0029985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ubiquitin_ligase_activity","termid":"PBO:0029985"}


id: GO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior cibarial plate over time, from their formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate development","termid":"GO:0048722"}


id: GO:0021537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon development","synonyms":[{"name":"cerebrum development","type":"exact"}],"termid":"GO:0021537"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: PBO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0011171"}


id: GO:0086022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of SA node cardiomyocyte to an atrial cardiomyocyte via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"SA node cell to atrial cardiac muscle cell communication","termid":"GO:0086070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"SA node cell-atrial cardiac muscle cell adhesion involved in cell communication","synonyms":[{"name":"SA cardiac muscle cell-atrial cardiac muscle cell adhesion involved in cell communication","type":"exact"},{"name":"SA cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"exact"},{"name":"SAN cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"exact"},{"name":"sinoatrial node cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"exact"},{"name":"sinus node cardiomyocyte-atrial cardiomyocyte adhesion involved in cell communication","type":"narrow"}],"termid":"GO:0086022"}


id: GO:0070471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the uterus. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The uterus is a muscular organ of the female mammal for containing and usually for nourishing the young during development prior to birth.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine smooth muscle contraction","synonyms":[{"name":"myometrial contraction","type":"exact"},{"name":"myometrial smooth muscle contraction","type":"exact"},{"name":"myometrium contraction","type":"exact"}],"termid":"GO:0070471"}


id: PATO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000338 compatability value (obsolete PATO:0000338)","termid":"PATO:0000338"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: PBO:0060326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO1D divergent transcript","termid":"PBO:0060326"}


id: PR:O74370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf12 gene.","definition_xrefs":["UniProtKB:O74370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.05c","synonyms":[{"name":"Spom972h-cwf12","type":"exact"},{"name":"complexed with cdc5 protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74370"}


id: PBO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_fusion_during_mating","termid":"PBO:0031699"}


id: PBO:0043859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRADD antisense RNA 1","termid":"PBO:0043859"}


id: PBO:0076699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 1","termid":"PBO:0076699"}


id: GO:0009678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + H+(in) + H2O = 2 H+(out) + 2 phosphate.","definition_xrefs":["GOC:mtg_transport","Wikipedia:Proton-pumping_pyrophosphatase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"diphosphate hydrolysis-driven proton transmembrane transporter activity","secondary_identifiers":["EC:7.1.3.1","TC:3.A.10","RHEA:13973","MetaCyc:TRANS-RXN-370"],"synonyms":[{"name":"H+-exporting diphosphatase","type":"related"},{"name":"PP(i) hydrolysis-driven proton transmembrane transporter activity","type":"exact"},{"name":"hydrogen-translocating pyrophosphatase activity","type":"related"},{"name":"proton-pumping diphosphatase","type":"related"},{"name":"proton-pumping pyrophosphatase","type":"related"},{"name":"proton-translocating pyrophosphatase activity","type":"exact"},{"name":"pyrophosphate hydrolysis-driven proton transmembrane transporter activity","type":"related"}],"termid":"GO:0009678"}


id: PBO:0071450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 56","termid":"PBO:0071450"}


id: PBO:0056547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanin concentrating hormone receptor 1","termid":"PBO:0056547"}


id: GO:0019203
data:
  {"annotated_genes":["SJAG_02713","SJAG_00039","SJAG_05314","SJAG_01646","SJAG_00711","SJAG_00182","SJAG_00129","SJAG_00685","SJAG_01427","SJAG_01862","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77493,74355,72699,75301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[106705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050308"},{"annotations":[75180,77767,73483,73948,78024,78613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbohydrate phosphate + H2O = carbohydrate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00129":null,"SJAG_00182":null,"SJAG_00685":null,"SJAG_00711":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"carbohydrate phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3781018","Reactome:R-HSA-3791349","Reactome:R-HSA-3781011"],"termid":"GO:0019203","terms_by_termid":{"GO:0004331":null,"GO:0004805":null,"GO:0050308":null}}


id: GO:0097504
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nuclear bodies frequently found near or associated with Cajal bodies (also called coiled bodies or CBs). Gemini of coiled bodies, or 'gems', are similar in size and shape to CBs, and often indistinguishable under the microscope. Unlike CBs, gems do not contain small nuclear ribonucleoproteins (snRNPs); they contain a protein called survivor of motor neurons (SMN) whose function relates to snRNP biogenesis. Gems are believed to assist CBs in snRNP biogenesis, and to play a role in the etiology of spinal muscular atrophy (SMA).","definition_xrefs":["PMID:11031238","GOC:pr","PMID:9683623","Wikipedia:Cell_nucleus#Cajal_bodies_and_gems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"Gemini of coiled bodies","synonyms":[{"name":"Gems","type":"exact"}],"termid":"GO:0097504"}


id: PBO:0088588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex BRCT domain subunit Nbs1","termid":"PBO:0088588"}


id: PBO:0028304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitosis","termid":"PBO:0028304"}


id: PBO:0091471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbose reductase","termid":"PBO:0091471"}


id: PBO:0073216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEMA5A antisense RNA 1","termid":"PBO:0073216"}


id: GO:1900373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide biosynthetic process","termid":"GO:0030810"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"activation of purine nucleotide anabolism","type":"exact"},{"name":"activation of purine nucleotide biosynthesis","type":"exact"},{"name":"activation of purine nucleotide biosynthetic process","type":"narrow"},{"name":"activation of purine nucleotide formation","type":"exact"},{"name":"activation of purine nucleotide synthesis","type":"exact"},{"name":"positive regulation of purine nucleotide anabolism","type":"exact"},{"name":"positive regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of purine nucleotide formation","type":"exact"},{"name":"positive regulation of purine nucleotide synthesis","type":"exact"},{"name":"up regulation of purine nucleotide anabolism","type":"exact"},{"name":"up regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up regulation of purine nucleotide formation","type":"exact"},{"name":"up regulation of purine nucleotide synthesis","type":"exact"},{"name":"up-regulation of purine nucleotide anabolism","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of purine nucleotide formation","type":"exact"},{"name":"up-regulation of purine nucleotide synthesis","type":"exact"},{"name":"upregulation of purine nucleotide anabolism","type":"exact"},{"name":"upregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"upregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of purine nucleotide formation","type":"exact"},{"name":"upregulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900373"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


