# terms

id: PBO:0089944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane alpha-1,3-glucan synthase Mok12","termid":"PBO:0089944"}


id: PBO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps24","termid":"PBO:0002532"}


id: PBO:0040424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 1","termid":"PBO:0040424"}


id: PR:Q9URZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mel1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-galactosidase mel1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.07c","synonyms":[{"name":"Melibiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mel1","type":"exact"},{"name":"alpha-D-galactoside galactohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ0"}


id: GO:0098943
data:
  {"annotated_genes":["SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84755],"is_not":false,"summary":null,"term":"GO:0098943"}]},"cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor from the postsynaptic endosome in tranpsort vesicles to the lysosome for degradation.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"protein localization to lysosome","termid":"GO:0061462"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor transport, postsynaptic endosome to lysosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"postsynaptic neurotransmitter receptor endosomal trafficking","type":"broad"}],"termid":"GO:0098943","terms_by_termid":{"GO:0098943":null}}


id: GO:0035723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-15 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-15","termid":"GO:0071350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-15-mediated signaling pathway","synonyms":[{"name":"IL-15-mediated signaling pathway","type":"exact"},{"name":"interleukin-15-mediated signalling pathway","type":"exact"}],"termid":"GO:0035723"}


id: PBO:0078266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-4","termid":"PBO:0078266"}


id: PBO:0082702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the meiotic outer plaque of the spindle pole body; involved in modifying the meiotic outer plaque that is required prior to prospore membrane formation","termid":"PBO:0082702"}


id: SO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_intron_variant","synonyms":[{"name":"5 prime UTR intron variant","type":"exact"}],"termid":"SO:0002091"}


id: PBO:0086180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for transcription of rDNA by RNA polymerase I; transcription factor independent of DNA template; involved in recruitment of RNA polymerase I to rDNA; structure reveals unique HEAT repeat fold and a surface serine patch; phosphorylation of serine patch impairs cell growth and reduces RNA polymerase I binding in vitro and RNA polymerase I recruitment to the rDNA gene in vivo","termid":"PBO:0086180"}


id: PBO:0024813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_agent_in","termid":"PBO:0024813"}


id: GO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + 3 H+ + 3 malonyl-CoA + NADPH = 6-methylsalicylate + 3 CO2 + 4 CoA + H2O + NADP+.","definition_xrefs":["RHEA:12240","EC:2.3.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-methylsalicylic acid synthase activity","secondary_identifiers":["MetaCyc:2.3.1.165-RXN","KEGG_REACTION:R07253"],"synonyms":[{"name":"6-MSAS activity","type":"related"},{"name":"MSAS activity","type":"related"},{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl-reducing, thioester-hydrolysing and cyclizing)","type":"related"}],"termid":"GO:0050641"}


id: GO:1990951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The assembly and organization of the manchette, a tubular array of microtubules, possibly also containing actin filaments, that extends from the perinuclear ring surrounding the spermatid nucleus to the flagellar axoneme.","definition_xrefs":["PMID:24440897","GOC:krc","PMID:22319670","PMID:26792866"],"gene_count":0,"genotype_count":0,"name":"obsolete manchette assembly (obsolete GO:1990951)","termid":"GO:1990951"}


id: PBO:0062031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily S member 2","termid":"PBO:0062031"}


id: PATO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000928 absolute photosensitivity (obsolete PATO:0000928)","termid":"PATO:0000928"}


id: PR:Q8X1T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A desumoylating isopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DeSI-like protein sdu1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.06","secondary_identifiers":["UniProtKB:Q8X1T0"],"synonyms":[{"name":"Spom972h-DESI2","type":"exact"},{"name":"meiotically up-regulated gene 67 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8X1T0"}


id: GO:0044232
data:
  {"annotated_genes":["SJAG_01329","SJAG_03170","SJAG_01116","SJAG_05241","SJAG_01929","SJAG_04552","SJAG_01305","SJAG_03710","SJAG_02501","SJAG_00059","SJAG_03416","SJAG_05184","SJAG_04370","SJAG_02002","SJAG_02578","SJAG_04221","SJAG_02028"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75985,100703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140268"},{"annotations":[111857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098853"},{"annotations":[113315,103925,78521,70116,104063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[72674,102698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044233"},{"annotations":[97947,106480,74465,103717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044284"},{"annotations":[76226,102700,103417,111858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071561"},{"annotations":[90367,102703,86115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990816"}]},"cv_name":"cellular_component","definition":"A zone of apposition between the membranes of an organelle with another membrane, either another membrane of the same organelle, a membrane of another organelle, or the plasma membrane. Membrane contact sites (MCSs) are structured by bridging complexes. They are specialized for communication, including the efficient traffic of small molecules such as Ca2+ ions and lipids, as well as enzyme-substrate interactions.","definition_xrefs":["PMID:16806880","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"organelle","termid":"GO:0043226"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_01116":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01929":null,"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_02578":null,"SJAG_03170":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04552":null,"SJAG_05184":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle membrane contact site","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MCS","type":"exact"},{"name":"inter-organelle junction","type":"narrow"},{"name":"interorganelle junction","type":"narrow"}],"termid":"GO:0044232","terms_by_termid":{"GO:0032865":null,"GO:0044233":null,"GO:0044284":null,"GO:0071561":null,"GO:0098853":null,"GO:0140268":null,"GO:1990816":null}}


id: GO:1990638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to granulocyte colony-stimulating factor","synonyms":[{"name":"response to G-CSF","type":"exact"}],"termid":"GO:1990638"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: GO:0018897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the sulfur atom from dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dibenzothiophene metabolic process","termid":"GO:0018895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dibenzothiophene desulfurization","secondary_identifiers":["UM-BBD_pathwayID:dbt","MetaCyc:PWY-681"],"synonyms":[{"name":"dibenzothiophene desulphurization","type":"exact"}],"termid":"GO:0018897"}


id: MOD:00625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide derivatized residue","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:00625"}


id: GO:0009803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cinnamic acid metabolic process","synonyms":[{"name":"cinnamic acid metabolism","type":"exact"},{"name":"cinnamylic acid metabolic process","type":"exact"},{"name":"cinnamylic acid metabolism","type":"exact"},{"name":"phenylacrylic acid metabolic process","type":"exact"},{"name":"phenylacrylic acid metabolism","type":"exact"},{"name":"phenylpropenoic acid metabolic process","type":"exact"},{"name":"phenylpropenoic acid metabolism","type":"exact"}],"termid":"GO:0009803"}


id: PR:Q9P7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sin1 gene.","definition_xrefs":["UniProtKB:Q9P7Y9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-activated map kinase-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.02c","synonyms":[{"name":"SAPK-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sin1","type":"exact"}],"termid":"PR:Q9P7Y9"}


id: GO:0015495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + H+(out) = gamma-aminobutyric acid(in) + H+(in).","definition_xrefs":["TC:2.A.18.5.1","TC:2.A.3.1.4","TC:2.A.3.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"gamma-aminobutyric acid:proton symporter activity","secondary_identifiers":["GO:0015329","Reactome:R-HSA-428625","GO:0005331"],"synonyms":[{"name":"4-aminobutanoate:hydrogen symporter activity","type":"exact"},{"name":"4-aminobutanoate:proton symporter activity","type":"exact"},{"name":"4-aminobutyrate:hydrogen symporter activity","type":"exact"},{"name":"4-aminobutyrate:proton symporter activity","type":"exact"},{"name":"GABA:hydrogen symporter activity","type":"exact"},{"name":"GABA:proton symporter activity","type":"exact"},{"name":"gamma-aminobutyric acid permease activity","type":"exact"},{"name":"gamma-aminobutyric acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015495"}


id: FYPO:0002114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a transmembrane transporter activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652"],"is_obsolete":false,"name":"transmembrane transporter activity phenotype","synonyms":[{"name":"fission yeast transporter activity phenotype","type":"exact"}],"termid":"FYPO:0002114"}


id: FYPO:0006665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagy of the nucleus occurs to a greater extent than normal during G0 phase.","definition_xrefs":["GO:0044804","PMID:30116786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased nucleophagy during G0","synonyms":[{"name":"increased autophagy of nucleus during G0","type":"exact"},{"name":"increased nucleophagy during cell quiescence","type":"exact"},{"name":"increased nucleophagy during quiescence","type":"exact"}],"termid":"FYPO:0006665"}


id: PBO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0034466"}


id: PBO:0003471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis- trans isomerase Cyp3","termid":"PBO:0003471"}


id: PBO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase Tdp1","termid":"PBO:0005178"}


id: PBO:0057878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3182","termid":"PBO:0057878"}


id: PBO:0066625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor B","termid":"PBO:0066625"}


id: PBO:0028780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_shortening_telomeres","termid":"PBO:0028780"}


id: PBO:0057209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376c","termid":"PBO:0057209"}


id: PBO:0085877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0085877"}


id: PBO:0027679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_translation","termid":"PBO:0027679"}


id: GO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain.","definition_xrefs":["GOC:jid","ISBN:0878937420","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putamen development","termid":"GO:0021758"}


id: PBO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.25.1","termid":"PBO:0000325"}


id: GO:0009630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orientation of plant parts under the stimulation of gravity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gravitropism","secondary_identifiers":["Wikipedia:Gravitropism"],"synonyms":[{"name":"geotropism","type":"exact"}],"termid":"GO:0009630"}


id: PBO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 4 pseudogene 1","termid":"PBO:0047413"}


id: GO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a garland nephrocyte. A garland nephrocyte is an insect renal cell that filters hemolymph and forms a ring with other garland nephrocytes around the esophagus. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["CL:0000486","PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"garland nephrocyte differentiation","secondary_identifiers":["GO:0007514"],"synonyms":[{"name":"garland cell differentiation","type":"exact"}],"termid":"GO:0061321"}


id: FYPO:0004172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to heat","synonyms":[{"name":"decreased protein kinase activity during cellular response to heat stress","type":"exact"},{"name":"reduced protein kinase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0004172"}


id: FYPO:0001913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ubiquitin ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished ubiquitin ligase activity","synonyms":[{"name":"abolished ubiquitin-protein ligase activity","type":"exact"},{"name":"ubiquitin ligase activity abolished","type":"exact"}],"termid":"FYPO:0001913"}


id: PBO:0028390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glyoxalase_III_activity","termid":"PBO:0028390"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: PBO:0049217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 1","termid":"PBO:0049217"}


id: PBO:0082183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alanine:glyoxylate aminotransferase (AGT); catalyzes the synthesis of glycine from glyoxylate, which is one of three pathways for glycine biosynthesis in yeast; similar to mammalian and plant alanine:glyoxylate aminotransferases; human homolog AGXT complements yeast null mutant","termid":"PBO:0082183"}


id: PBO:0059399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 1","termid":"PBO:0059399"}


id: PBO:0041405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 120","termid":"PBO:0041405"}


id: GO:0048935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron development","termid":"GO:0048935"}


id: PBO:0063013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2","termid":"PBO:0063013"}


id: GO:0014049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of glutamate.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate secretion","termid":"GO:0014048"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"glutamate secretion","termid":"GO:0014047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate secretion","synonyms":[{"name":"activation of glutamate secretion","type":"narrow"},{"name":"stimulation of glutamate secretion","type":"narrow"},{"name":"up regulation of glutamate secretion","type":"exact"},{"name":"up-regulation of glutamate secretion","type":"exact"},{"name":"upregulation of glutamate secretion","type":"exact"}],"termid":"GO:0014049"}


id: GO:1902242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of copal-8-ol diphosphate(3-).","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) catabolic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) breakdown","type":"exact"},{"name":"copal-8-ol diphosphate(3-) catabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) degradation","type":"exact"}],"termid":"GO:1902242"}


id: GO:0071596
data:
  {"annotated_genes":["SJAG_02705","SJAG_04619","SJAG_01253"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73818,85211,93072],"is_not":false,"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the N-end rule pathway. In the N-end rule pathway, destabilizing N-terminal residues (N-degrons) in substrates are recognized by E3 ligases (N-recognins), whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19246002","PMID:9112437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01253":null,"SJAG_02705":null,"SJAG_04619":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the N-end rule pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein breakdown via the N-end rule pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolism via the N-end rule pathway","type":"exact"},{"name":"ubiquitin-dependent protein degradation via the N-end rule pathway","type":"exact"}],"termid":"GO:0071596","terms_by_termid":{"GO:0071596":null}}


id: PBO:0088461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Nca2","termid":"PBO:0088461"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


id: PBO:0064112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 2 (gene/pseudogene)","termid":"PBO:0064112"}


id: GO:0052163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont modulates the frequency, rate or extent of the production of nitric oxide as part of the innate immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont defense to host-produced nitric oxide (obsolete GO:0052163)","synonyms":[{"name":"defense response to host innate immune response nitric oxide production","type":"narrow"},{"name":"evasion or tolerance by organism of host NO","type":"exact"},{"name":"evasion or tolerance by organism of host nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of host-produced NO","type":"exact"},{"name":"evasion or tolerance by organism of host-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance by organism of nitric oxide produced by other organism involved in symbiotic interaction","type":"broad"},{"name":"evasion or tolerance by symbiont of host-produced nitric oxide","type":"exact"},{"name":"evasion or tolerance of NO produced by host in response to organism","type":"exact"},{"name":"evasion or tolerance of nitric oxide produced by host in response to organism","type":"exact"},{"name":"modulation by organism of defense-related host NO production","type":"exact"},{"name":"modulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"response to defense-related host nitric oxide production","type":"related"},{"name":"response to defense-related nitric oxide production by other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052163"}


id: PBO:0068634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 14, pseudogene","termid":"PBO:0068634"}


id: GO:0099640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"axo-dendritic protein transport","synonyms":[{"name":"axonal protein transport","type":"narrow"}],"termid":"GO:0099640"}


id: PBO:0054570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1972","termid":"PBO:0054570"}


id: GO:0035929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any steroid that acts as a hormone into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"steroid hormone secretion","termid":"GO:0035929"}


id: PBO:0054500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1900","termid":"PBO:0054500"}


id: GO:1905553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","GO_REF:0000058","GOC:TermGenie","GOC:BHF","PMID:23201774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel branching","synonyms":[{"name":"regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905553"}


id: GO:0050051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-hydroxy-leukotriene B4 + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:11461919","PMID:9675028","PMID:8486631","PMID:15364545","RHEA:22176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"leukotriene-B4 20-monooxygenase activity","secondary_identifiers":["EC:1.14.14.94","MetaCyc:LEUKOTRIENE-B4-20-MONOOXYGENASE-RXN","Reactome:R-HSA-211873"],"synonyms":[{"name":"LTB(4) 20-hydroxylase activity","type":"related"},{"name":"LTB(4) omega-hydroxylase activity","type":"related"},{"name":"LTB4 20-hydroxylase activity","type":"related"},{"name":"LTB4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-B4 20-hydroxylase activity","type":"related"},{"name":"leukotriene-B4 omega-hydroxylase activity","type":"related"}],"termid":"GO:0050051"}


id: FYPO:0002314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-geranylgeranyl diphosphate (GGPP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular GGPP level","termid":"FYPO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"GGPP absent from cell","synonyms":[{"name":"2-trans,6-trans,10-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"GGPP absent from cell during mitotic cell cycle","type":"related"},{"name":"GGPP absent from cell during vegetative growth","type":"exact"},{"name":"all-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"all-trans-geranylgeranyl pyrophosphate absent from cell","type":"exact"}],"termid":"FYPO:0002314"}


id: GO:0071578
data:
  {"annotated_genes":["SJAG_04185","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100501,109818],"is_not":false,"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of zinc(2+) ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:18637840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02968":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"zinc ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044749","GO:0006830","GO:0006831","GO:0140160"],"synonyms":[{"name":"high-affinity zinc II ion transmembrane import","type":"narrow"},{"name":"high-affinity zinc II ion transport","type":"narrow"},{"name":"low-affinity zinc II ion transport","type":"narrow"},{"name":"zinc II ion plasma membrane import","type":"exact"},{"name":"zinc II ion transmembrane import","type":"exact"},{"name":"zinc import","type":"exact"},{"name":"zinc ion import into cell","type":"exact"},{"name":"zinc ion transmembrane import","type":"related"},{"name":"zinc uptake","type":"exact"}],"termid":"GO:0071578","terms_by_termid":{"GO:0071578":null}}


id: PBO:0040761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 1 pseudogene 2","termid":"PBO:0040761"}


id: PBO:0059881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 4","termid":"PBO:0059881"}


id: PR:Q9UTK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vrg4 gene.","definition_xrefs":["UniProtKB:Q9UTK8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-mannose transporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.18","synonyms":[{"name":"GMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-vrg4","type":"exact"}],"termid":"PR:Q9UTK8"}


id: PBO:0077086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 1","termid":"PBO:0077086"}


id: PBO:0057949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3671","termid":"PBO:0057949"}


id: PBO:0091268
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(1)","termid":"PBO:0091268"}


id: FYPO:0005988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule anchoring at the cell cortex of the cell tip does not occur during the meiotic cell cycle. Normally, anchoring maintains the localization of microtubules with their plus ends at the cell cortex.","definition_xrefs":["PMID:25736293","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abolished microtubule anchoring at cell cortex of cell tip during meiotic cell cycle","synonyms":[{"name":"abolished microtubule anchoring at cell tip cortex during meiotic cell cycle","type":"exact"},{"name":"abolished microtubule cortical anchoring at cell tip during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005988"}


id: PBO:0075602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOC domain containing 1","termid":"PBO:0075602"}


id: PBO:0110986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA prt2, pho84 repressing","termid":"PBO:0110986"}


id: PBO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Bis1","termid":"PBO:0018128"}


id: GO:0003881
data:
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id: PBO:0039324
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id: GO:0048335
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id: GO:0072175
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id: GO:0047493
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id: GO:0045550
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id: PBO:0052966
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id: PBO:0028532
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id: PATO:0001790
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id: PBO:0090362
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id: PBO:0077487
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id: PBO:0082968
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id: GO:0016618
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id: GO:0016507
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id: GO:0051166
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id: PBO:0046024
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id: PBO:0027748
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id: PBO:0024877
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id: GO:0042592
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process","type":"related"}],"termid":"GO:0042592","terms_by_termid":{"GO:0001678":null,"GO:0006808":null,"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006880":null,"GO:0006882":null,"GO:0006884":null,"GO:0007035":null,"GO:0007042":null,"GO:0009992":null,"GO:0010106":null,"GO:0010619":null,"GO:0010960":null,"GO:0010961":null,"GO:0010992":null,"GO:0019676":null,"GO:0019740":null,"GO:0030003":null,"GO:0030007":null,"GO:0030026":null,"GO:0030641":null,"GO:0030643":null,"GO:0032468":null,"GO:0033214":null,"GO:0033215":null,"GO:0042593":null,"GO:0042632":null,"GO:0045454":null,"GO:0050801":null,"GO:0051453":null,"GO:0051480":null,"GO:0055064":null,"GO:0055075":null,"GO:0055088":null,"GO:0055091":null,"GO:0090156":null,"GO:0090463":null,"GO:0090464":null,"GO:0090465":null,"GO:0098711":null}}


id: PBO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein involved in ER membrane tethering","termid":"PBO:0018287"}


id: GO:0021713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior olivary nucleus over time, from its formation to the mature structure. The inferior olivary nucleus is a capsule-shaped structure in the ventral medulla located just lateral and dorsal to the medullary pyramids. Neurons in the inferior olivary nucleus are the source of climbing fiber input to the cerebellar cortex; these neurons have been implicated in various functions, such as learning and timing of movements.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior olivary nucleus development","synonyms":[{"name":"inferior olive development","type":"related"}],"termid":"GO:0021713"}


id: PBO:0028776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ubiquitinyl_hydrolase_activity","termid":"PBO:0028776"}


id: PBO:0041474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 54","termid":"PBO:0041474"}


id: FYPO:0003277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during vegetative growth","termid":"FYPO:0003269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitosis","synonyms":[{"name":"abolished protein localisation to microtubule during mitosis","type":"exact"},{"name":"abolished protein localization to microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to microtubule during mitosis during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule during mitotic M phase","type":"related"},{"name":"abolished protein localization to microtubule during mitotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during mitosis","type":"related"},{"name":"protein localization to microtubule abolished during mitosis","type":"exact"}],"termid":"FYPO:0003277"}


id: PBO:0067173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 229, pseudogene","termid":"PBO:0067173"}


id: PBO:0059109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 5","termid":"PBO:0059109"}


id: PBO:0087737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; homologous to S. pombe rad18","termid":"PBO:0087737"}


id: PBO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, implicated in vesicle-mediated transport","termid":"PBO:0008425"}


id: PBO:0108612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F2, pseudogene","termid":"PBO:0108612"}


id: PBO:0035961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0035961"}


id: PBO:0086376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci; SWAT-GFP and mCherry fusion proteins localize to the nucleus","termid":"PBO:0086376"}


id: PR:P55877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif11 gene.","definition_xrefs":["UniProtKB:P55877","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.07","synonyms":[{"name":"Spom972h-tif11","type":"exact"},{"name":"eIF-1A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 4C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P55877"}


id: GO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that posttranscriptionally catalyzes insertion, deletion or substitution of nucleotides at multiple sites within nascent mRNA transcripts to produce mature mRNAs in eukaryotes.","definition_xrefs":["PMID:12139607","PMID:24316715","PMID:11564867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mRNA editing complex","synonyms":[{"name":"editosome","type":"exact"}],"termid":"GO:0045293"}


id: PBO:0049403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1B","termid":"PBO:0049403"}


id: PBO:0059370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 3","termid":"PBO:0059370"}


id: GO:0006760
data:
  {"annotated_genes":["SJAG_01616","SJAG_02225","SJAG_03275","SJAG_01126","SJAG_01198","SJAG_00529","SJAG_02408","SJAG_01766","SJAG_03224","SJAG_03712","SJAG_00815","SJAG_00106","SJAG_04156","SJAG_01466","SJAG_03914"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108966,104779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[68613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[71013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[104780,108967,110298,101128,86198,101276,102452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[87209,71015,90544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[72308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[86200,78393,71014,110300,102453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[87212,70804,101131,75637,74903,90547,72309,71765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"},{"annotations":[72017,88960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a folic acid-containing compound, i.e. any of a group of heterocyclic compounds based on the pteroic acid skeleton conjugated with one or more L-glutamic acid or L-glutamate units.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"folic acid-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"folate and derivative metabolic process","type":"exact"},{"name":"folate and derivative metabolism","type":"exact"},{"name":"folate-containing compound metabolic process","type":"exact"},{"name":"folate-containing compound metabolism","type":"exact"},{"name":"folic acid and derivative metabolic process","type":"exact"},{"name":"folic acid and derivative metabolism","type":"exact"},{"name":"folic acid-containing compound metabolism","type":"exact"},{"name":"vitamin B9 and derivative metabolic process","type":"exact"},{"name":"vitamin B9 and derivative metabolism","type":"exact"},{"name":"vitamin M and derivative metabolic process","type":"exact"},{"name":"vitamin M and derivative metabolism","type":"exact"}],"termid":"GO:0006760","terms_by_termid":{"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0035999":null,"GO:0046452":null,"GO:0046654":null,"GO:0046655":null,"GO:0046656":null,"GO:0046901":null}}


id: GO:0035838
data:
  {"annotated_genes":["SJAG_04666","SJAG_01754","SJAG_04960","SJAG_03637","SJAG_04058","SJAG_01196","SJAG_02838","SJAG_03126","SJAG_01388","SJAG_02169","SJAG_03748","SJAG_04624","SJAG_03011","SJAG_03581","SJAG_02511","SJAG_04901","SJAG_00030","SJAG_03915","SJAG_01290","SJAG_04509","SJAG_02320","SJAG_03625","SJAG_05285","SJAG_02278","SJAG_04703","SJAG_00152","SJAG_00514","SJAG_02338","SJAG_01925","SJAG_02166","SJAG_00424","SJAG_03486","SJAG_03705","SJAG_04765","SJAG_04358","SJAG_02222","SJAG_00661","SJAG_02916","SJAG_03119","SJAG_02104","SJAG_04566","SJAG_01189"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74650,84297,89920,91006,91503,95950,96371,100189,108711,113261,115857,115859,115861,115863,115865,115867],"is_not":false,"summary":null,"term":"GO:0035838"},{"annotations":[86609,88372,85731,112489,115542,90633,112865,110780,83687,102464,109643,108479,86643,70317,113174,114611,115344],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[109340,87505,95509,107246,92995,85304,111011,112498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035841"},{"annotations":[107248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"},{"annotations":[95510,102471,87506,110674,100978,85306,84597,99342,109342,92996,111012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035840"},{"annotations":[77052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"The region at either end of the longest axis of a cylindrical or elongated cell, where polarized growth occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_01189":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_01388":null,"SJAG_01754":null,"SJAG_01925":null,"SJAG_02104":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02338":null,"SJAG_02511":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_03011":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03915":null,"SJAG_04058":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04566":null,"SJAG_04624":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04765":null,"SJAG_04901":null,"SJAG_04960":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growing cell tip","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:30726171":null},"synonyms":[{"name":"growing cell end","type":"exact"}],"termid":"GO:0035838","terms_by_termid":{"GO:0035838":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:1902716":null,"GO:1902929":null}}


id: PBO:0039818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor GTPase activating protein 2","termid":"PBO:0039818"}


id: PBO:0017671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR79 (predicted)","termid":"PBO:0017671"}


id: PBO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology","termid":"PBO:0031548"}


id: PR:O14329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrg17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter zrg17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.14c","synonyms":[{"name":"Spom972h-zrg17","type":"exact"}],"termid":"PR:O14329"}


id: _global:directly_associated_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 directly_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 increases if the magnitude of q2 is increased, or the magnitude of q1 decreases if the magnitude of q2 is decreased. The relationship is not necessarily linear.","definition_xrefs":["PATOC:cjm","Wikipedia:Association_(statistics)"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_associated_with","termid":"_global:directly_associated_with"}


id: GO:0072281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in metanephric nephron morphogenesis","termid":"GO:0072281"}


id: PBO:0084556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the SWI/SNF chromatin remodeling complex; has an as yet unidentified role in the complex; has identifiable counterparts in closely related yeast species; abundantly expressed in many growth conditions; paralog of Npl6p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0084556"}


id: GO:2001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellooligosaccharide binding","termid":"GO:2001064"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: PBO:0012064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal5h1 (predicted)","termid":"PBO:0012064"}


id: PBO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate transmembrane transporter (predicted)","termid":"PBO:0001009"}


id: PBO:0066613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 2","termid":"PBO:0066613"}


id: PBO:0085594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern","termid":"PBO:0085594"}


id: PBO:0069370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 630, pseudogene","termid":"PBO:0069370"}


id: PBO:0086668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; predicted to have a role in transcription based on computational 'guilt by association' analysis","termid":"PBO:0086668"}


id: PBO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 25","termid":"PBO:0048901"}


id: SO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls downstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["SO:ke","NCBI:dm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_downstream_transcript_variant","synonyms":[{"name":"genic 3 prime transcript variant","type":"exact"},{"name":"genic 3' transcript variant","type":"exact"},{"name":"genic downstream transcript variant","type":"exact"}],"termid":"SO:0002152"}


id: FYPO:0003418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which malate dehydrogenase (decarboxylating) (NAD+) activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","termid":"FYPO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abolished 'malic' enzyme activity","type":"related"},{"name":"abolished (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abolished NAD-linked malic enzyme activity","type":"related"},{"name":"abolished NAD-malic enzyme activity","type":"broad"},{"name":"abolished NAD-specific malic enzyme activity","type":"related"},{"name":"abolished malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"malate dehydrogenase (decarboxylating) (NAD+) activity abolished","type":"exact"}],"termid":"FYPO:0003418"}


id: GO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a subpopulation of granulosa cells surrounding the oocyte acquires the specialized features of an ovarian cumulus cell.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cumulus cell differentiation","synonyms":[{"name":"ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0001549"}


id: FYPO:0005978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which spliced forms of RNAs transcribed from dg repeats in the centromere outer repeat region are present at higher levels than normal.","definition_xrefs":["PMID:28231281","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cen-dg RNA level","termid":"FYPO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased spliced cen-dg RNA level","synonyms":[{"name":"increased level of spliced cen-dg RNA","type":"exact"},{"name":"increased level of spliced cen-dg transcripts","type":"exact"},{"name":"increased level of spliced centromeric dg repeat RNA","type":"exact"},{"name":"increased level of spliced centromeric dg repeat transcripts","type":"exact"},{"name":"increased spliced cen-dg RNA accumulation","type":"related"},{"name":"increased spliced cen-dg RNA level during mitotic cell cycle","type":"related"},{"name":"increased spliced cen-dg RNA level during vegetative growth","type":"exact"},{"name":"increased spliced cen-dg transcript level","type":"exact"}],"termid":"FYPO:0005978"}


id: PBO:0070934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 42","termid":"PBO:0070934"}


id: GO:1990504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense core granule by fusion of the granule with the plasma membrane of a cell in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:17553987","GOC:kmv","PMID:24653208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"dense core granule exocytosis","synonyms":[{"name":"dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1990504"}


id: PBO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 19","termid":"PBO:0045829"}


id: GO:0004966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with galanin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"galanin receptor activity","termid":"GO:0004966"}


id: PBO:0063166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX3 and PAX7 binding protein 1","termid":"PBO:0063166"}


id: GO:0048242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of epinephrine by a cell. Epinephrine is a catecholamine hormone secreted by the adrenal medulla and a neurotransmitter, released by certain neurons and active in the central nervous system.","definition_xrefs":["GOC:jid","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"epinephrine transport","termid":"GO:0048241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"epinephrine secretion","synonyms":[{"name":"adrenaline secretion","type":"exact"}],"termid":"GO:0048242"}


id: PBO:0004339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP assembly factor Naf1 (predicted)","termid":"PBO:0004339"}


id: PBO:0026803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026803"}


id: PBO:0089844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase with TPR repeat","termid":"PBO:0089844"}


id: PBO:0060259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid derived growth factor","termid":"PBO:0060259"}


id: PBO:0048062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 11","termid":"PBO:0048062"}


id: MOD:00665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to a methylated alanine, such as N-methylalanine, N,N-dimethylalanine, or N,N,N-trimethylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated alanine","synonyms":[{"name":"MeAla","type":"exact"}],"termid":"MOD:00665"}


id: PBO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family (predicted)","termid":"PBO:0001885"}


id: _global:causally_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within,_positive_effect","termid":"_global:causally_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_positive_effect","secondary_identifiers":["RO:0002304"],"termid":"_global:causally_upstream_of,_positive_effect"}


id: PBO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 14","termid":"PBO:0071391"}


id: PBO:0079653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 1","termid":"PBO:0079653"}


id: GO:0070597
data:
  {"annotated_genes":["SJAG_02916","SJAG_04184","SJAG_00610","SJAG_04666","SJAG_01028","SJAG_04236","SJAG_03057","SJAG_02278","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72814,70610,77564,72987,71418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[99122,88389,91009,85311],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070597","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0078353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-1","termid":"PBO:0078353"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: PBO:0034475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylethanolamine_level","termid":"PBO:0034475"}


id: GO:0150057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 2. Amylin receptor complex 2 (AMY2) also serves as a receptor for adrenomedullin (AM/ADM).","definition_xrefs":["GOC:aruk","PMID:22500019","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"amylin receptor complex 2","synonyms":[{"name":"AMY2 complex","type":"exact"}],"termid":"GO:0150057"}


id: GO:1902933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenol.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:17693564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenol metabolic process","synonyms":[{"name":"isopentenol metabolism","type":"exact"}],"termid":"GO:1902933"}


id: GO:2000473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell migration","termid":"GO:2000471"},{"relation_name":"positively_regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic stem cell migration","synonyms":[{"name":"positive regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000473"}


id: GO:1990310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-III dockerin domain of a protein. Type-III dockerin domain is the binding partner of type-III cohesin domain.","definition_xrefs":["GOC:mengo_curators","PMID:24080387","PMID:23195689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type-III dockerin domain binding","termid":"GO:1990310"}


id: PBO:0029095
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cysteine_synthase_activity","termid":"PBO:0029095"}


id: PR:O94617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap1 gene.","definition_xrefs":["UniProtKB:O94617","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine pyrophosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.08","synonyms":[{"name":"Spom972h-uap1","type":"exact"}],"termid":"PR:O94617"}


id: PBO:0068978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 222, pseudogene","termid":"PBO:0068978"}


id: GO:0010837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte proliferation","termid":"GO:0010837"}


id: PBO:0039247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1L1 antisense RNA 1","termid":"PBO:0039247"}


id: GO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reversible reaction: (R,R)-butane-2,3-diol + NAD+ = (R)-acetoin + NADH + H+.","definition_xrefs":["EC:1.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R,R)-butanediol dehydrogenase activity","secondary_identifiers":["MetaCyc:RR-BUTANEDIOL-DEHYDROGENASE-RXN","RHEA:24340"],"synonyms":[{"name":"(R)-2,3-butanediol dehydrogenase activity","type":"related"},{"name":"(R)-diacetyl reductase activity","type":"related"},{"name":"1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"1-amino-2-propanol oxidoreductase activity","type":"related"},{"name":"2,3-butanediol dehydrogenase activity","type":"related"},{"name":"D-(-)-butanediol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol dehydrogenase activity","type":"related"},{"name":"D-1-amino-2-propanol:NAD(2) oxidoreductase activity","type":"related"},{"name":"D-aminopropanol dehydrogenase activity","type":"related"},{"name":"D-butanediol dehydrogenase activity","type":"related"},{"name":"aminopropanol oxidoreductase activity","type":"related"},{"name":"butylene glycol dehydrogenase activity","type":"related"},{"name":"butyleneglycol dehydrogenase activity","type":"related"},{"name":"diacetyl (acetoin) reductase activity","type":"related"}],"termid":"GO:0000721"}


id: PBO:0079640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 11","termid":"PBO:0079640"}


id: FYPO:0007190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is increased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:31483748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"increased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007190"}


id: PBO:0061127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin B","termid":"PBO:0061127"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24463506","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: FYPO:0006307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actin filament severing is decreased. Actin filament severing is the process in which an actin filament is broken down into smaller filaments.","definition_xrefs":["GO:0051014","PomBase:mah","PMID:22024167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based process","termid":"FYPO:0006306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased actin filament severing","synonyms":[{"name":"decreased F-actin severing","type":"exact"},{"name":"decreased actin filament severing during mitotic cell cycle","type":"related"},{"name":"decreased actin filament severing during vegetative growth","type":"exact"},{"name":"reduced actin filament severing","type":"exact"}],"termid":"FYPO:0006307"}


id: PBO:0109026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3102","termid":"PBO:0109026"}


id: PBO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 13","termid":"PBO:0042613"}


id: GO:1901837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription of nuclear large rRNA transcript mediated by RNA polymerase I.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"regulation of transcription of nucleolar large rRNA by RNA polymerase I","termid":"GO:1901836"},{"relation_name":"negatively_regulates","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription of nucleolar large rRNA by RNA polymerase I","synonyms":[{"name":"down regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"down regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"down-regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"down-regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"downregulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"downregulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"inhibition of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"narrow"},{"name":"inhibition of transcription of nuclear rRNA large Pol I transcript","type":"exact"},{"name":"negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter","type":"exact"},{"name":"negative regulation of transcription of nuclear rRNA large Pol I transcript","type":"exact"}],"termid":"GO:1901837"}


id: GO:0075103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075103)","synonyms":[{"name":"modulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075103"}


id: FYPO:0006248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of centromeres and associated kinetochores into a cluster at the nuclear periphery is increased during mitosis. Normally, centromere-kinetochore complexes cluster near the old spindle pole body during interphase of the mitotic cell cycle, but are not as tightly clustered during mitosis.","definition_xrefs":["PMID:28825727","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal centromere clustering at nuclear periphery","termid":"FYPO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased centromere clustering at nuclear periphery during mitosis","synonyms":[{"name":"increased centromere clustering at SPB during mitosis","type":"related"},{"name":"increased centromere clustering at nuclear periphery during M phase of mitotic cell cycle","type":"related"},{"name":"increased centromere clustering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased centromere clustering at old mitotic spindle pole body during mitosis","type":"related"},{"name":"increased centromere clustering at spindle pole body during mitosis","type":"related"},{"name":"increased centromere-SPB clustering during mitosis","type":"related"},{"name":"increased inter-centromere connection during mitosis","type":"exact"},{"name":"increased kinetochore clustering at SPB during mitosis","type":"related"},{"name":"increased kinetochore clustering at old mitotic spindle pole body during mitosis","type":"related"},{"name":"increased kinetochore clustering at spindle pole body during mitosis","type":"related"},{"name":"increased kinetochore localization at spindle pole body during mitosis","type":"related"},{"name":"increased kinetochores to spindle pole body clustering during mitosis","type":"related"},{"name":"increased mitotic centromere clustering at nuclear periphery during mitosis","type":"exact"}],"termid":"FYPO:0006248"}


id: _global:directly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates","termid":"_global:directly_regulates"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_positively_regulates","secondary_identifiers":["RO:0002629"],"termid":"_global:directly_positively_regulates"}


id: GO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near a second organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near other organism involved in symbiotic interaction (obsolete GO:0052225)","synonyms":[{"name":"energy taxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052225"}


id: PBO:0012831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp40","termid":"PBO:0012831"}


id: RO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during_which_starts","termid":"RO:0002088"}


id: PBO:0090303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like-containing domain superfamily protein","termid":"PBO:0090303"}


id: PBO:0042607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 7","termid":"PBO:0042607"}


id: GO:0009420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long (approximately 20 nm), thin external structure of the bacterial-type flagellum, which acts as a propeller.","definition_xrefs":["GOC:cilia","PMID:10572114","PMID:12624192","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum filament","synonyms":[{"name":"flagellar filament","type":"exact"},{"name":"flagellin-based flagellum filament","type":"exact"}],"termid":"GO:0009420"}


id: PR:Q09790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aps1 gene.","definition_xrefs":["UniProtKB:Q09790","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol polyphosphate phosphohydrolase aps1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.14","synonyms":[{"name":"Ap6A hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aps1","type":"exact"},{"name":"diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diadenosine hexaphosphate hydrolase (ADP-forming) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09790"}


id: MOD:01288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:255#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +28","termid":"MOD:00578"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +28 - site H","synonyms":[{"name":"Acetaldehyde +28","type":"related"},{"name":"Delta:H(4)C(2)","type":"related"}],"termid":"MOD:01288"}


id: PBO:0052467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 13","termid":"PBO:0052467"}


id: GO:0065010
data:
  {"annotated_genes":["SJAG_00751"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070062"}]},"cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00751":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular membrane-bounded organelle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extracellular membrane-enclosed organelle","type":"exact"}],"termid":"GO:0065010","terms_by_termid":{"GO:0070062":null}}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: PBO:0040368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 5","termid":"PBO:0040368"}


id: PBO:0004772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-2","termid":"PBO:0004772"}


id: GO:0070279
data:
  {"annotated_genes":["SJAG_00673","SJAG_01766","SJAG_02305","SJAG_02791","SJAG_02972","SJAG_04145","SJAG_00830","SJAG_00432","SJAG_03861","SJAG_02205","SJAG_04678","SJAG_03312","SJAG_05230","SJAG_00097","SJAG_00186","SJAG_01019","SJAG_03961","SJAG_00937","SJAG_03914","SJAG_03306","SJAG_03671","SJAG_00495","SJAG_03055","SJAG_03102","SJAG_04149","SJAG_04988","SJAG_03434","SJAG_00714","SJAG_00582","SJAG_04178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77246,98564,64624,73925,70042,83657,101890,103273,68830,66454,94510,60055,97065,78242,95579,108349,91873,72192,107741,99906,77993,106986,73669,88811,106915,73009,71997,67543,100093,70604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to a vitamin B6 compound: pyridoxal, pyridoxamine, pyridoxine, or the active form, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vitamin B6 binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0070279","terms_by_termid":{"GO:0030170":null}}


id: PBO:0041599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 10","termid":"PBO:0041599"}


id: PBO:0055314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: GO:0102037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 4-nitrotoluene + NADH + O2 = 4-nitrobenzyl alcohol + NAD+ + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-nitrotoluene monooxygenase activity","secondary_identifiers":["MetaCyc:R361-RXN"],"termid":"GO:0102037"}


id: GO:0070360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of an organism, usually a bacterial cell, from one place to another within its host organism, by a process involving continuous polymerization of actin at one pole of the symbiont cell. Some bacteria use host actin for migration from cell to cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15773977","GOC:jl","PMID:15981456","PMID:27997855","PMID:35285700","GOC:mah","PMID:26021574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization-dependent cell motility","termid":"GO:0070358"},{"relation_name":"is_a","term_name":"cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin polymerization-dependent cell-to-cell migration in host","secondary_identifiers":["GO:0070359"],"synonyms":[{"name":"actin polymerization-dependent cell migration in host","type":"broad"},{"name":"actin polymerization-dependent cell motility involved in migration of symbiont in host","type":"related"},{"name":"migration of symbiont within host by polymerization of host actin","type":"related"}],"termid":"GO:0070360"}


id: GO:1905830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:12432938","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of prostaglandin catabolic process","termid":"GO:1905828"},{"relation_name":"positively_regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of prostaglandin catabolic process","synonyms":[{"name":"activation of prostaglandin breakdown","type":"narrow"},{"name":"activation of prostaglandin catabolic process","type":"narrow"},{"name":"activation of prostaglandin catabolism","type":"narrow"},{"name":"activation of prostaglandin degradation","type":"narrow"},{"name":"positive regulation of prostaglandin breakdown","type":"exact"},{"name":"positive regulation of prostaglandin catabolism","type":"exact"},{"name":"positive regulation of prostaglandin degradation","type":"exact"},{"name":"up regulation of prostaglandin breakdown","type":"exact"},{"name":"up regulation of prostaglandin catabolic process","type":"exact"},{"name":"up regulation of prostaglandin catabolism","type":"exact"},{"name":"up regulation of prostaglandin degradation","type":"exact"},{"name":"up-regulation of prostaglandin breakdown","type":"exact"},{"name":"up-regulation of prostaglandin catabolic process","type":"exact"},{"name":"up-regulation of prostaglandin catabolism","type":"exact"},{"name":"up-regulation of prostaglandin degradation","type":"exact"},{"name":"upregulation of prostaglandin breakdown","type":"exact"},{"name":"upregulation of prostaglandin catabolic process","type":"exact"},{"name":"upregulation of prostaglandin catabolism","type":"exact"},{"name":"upregulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905830"}


id: GO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism effects a change that affects systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of host systemic acquired resistance","secondary_identifiers":["GO:0052299"],"synonyms":[{"name":"modulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host systemic acquired resistance","type":"exact"},{"name":"modulation by symbiont of systemic acquired resistance in host","type":"exact"}],"termid":"GO:0052160"}


id: PBO:0038640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 7","termid":"PBO:0038640"}


id: GO:1901328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytochalasin B stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytochalasin B","termid":"GO:1901328"}


id: PBO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antiparallel microtubule cross-linking factor Ase1","termid":"PBO:0001220"}


id: PBO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pro-orthology_relationship_with","termid":"PBO:0034160"}


id: PBO:0078448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 1 (non-functional)","termid":"PBO:0078448"}


id: PBO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 3","termid":"PBO:0072706"}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: FYPO:0004285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mitomycin C.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on mitomycin C","synonyms":[{"name":"normal cell population growth in presence of mitomycin C","type":"exact"},{"name":"normal cell population growth on mitomycin C","type":"exact"},{"name":"normal vegetative cell population growth on mitomycin C","type":"exact"}],"termid":"FYPO:0004285"}


id: PBO:0041825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0041825"}


id: GO:0031953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"negatively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autophosphorylation","synonyms":[{"name":"down regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"downregulation of protein amino acid autophosphorylation","type":"exact"},{"name":"inhibition of protein amino acid autophosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031953"}


id: PBO:0062250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BQ member 1 pseudogene","termid":"PBO:0062250"}


id: PBO:0065371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 2","termid":"PBO:0065371"}


id: PBO:0109224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 5","termid":"PBO:0109224"}


id: PBO:0030740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_cell_during_nitrogen_starvation","termid":"PBO:0030740"}


id: PBO:0031791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle","termid":"PBO:0031791"}


id: PBO:0073527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2","termid":"PBO:0073527"}


id: FYPO:0006553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus","synonyms":[{"name":"normal protein localisation to nucleus","type":"exact"}],"termid":"FYPO:0006553"}


id: PBO:0074052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 32","termid":"PBO:0074052"}


id: PBO:0045056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 7","termid":"PBO:0045056"}


id: FYPO:0003919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node","synonyms":[{"name":"abolished protein localisation to medial cortical node","type":"exact"},{"name":"abolished protein localization to cortical medial dot","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes","type":"related"},{"name":"abolished protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical nodes","type":"exact"},{"name":"abolished protein recruitment to medial cortical node","type":"related"},{"name":"protein localization to medial cortical node abolished","type":"exact"}],"termid":"FYPO:0003919"}


id: PBO:0109629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16 (pseudogene)","termid":"PBO:0109629"}


id: PBO:0056168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal vascular addressin cell adhesion molecule 1","termid":"PBO:0056168"}


id: GO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + cadaverine = 5'-methylthioadenosine + N-(3-aminopropyl)cadaverine.","definition_xrefs":["PMID:17545282","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"cadaverine aminopropyltransferase activity","secondary_identifiers":["EC:2.5.1.104"],"synonyms":[{"name":"cadaverine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043918"}


id: PBO:0027276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasm_during_cellular_response_to_salt_stress","termid":"PBO:0027276"}


id: GO:0034331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a cell junction in a stable functional or structural state. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"},{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction maintenance","termid":"GO:0034331"}


id: PBO:0063332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 8","termid":"PBO:0063332"}


id: GO:0061848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholecystokinin stimulus.","definition_xrefs":["PMID:14622258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cholecystokinin","termid":"GO:0061847"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cholecystokinin","termid":"GO:0061848"}


id: PBO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog (predicted)","termid":"PBO:0002230"}


id: GO:0051908
data:
  {"annotated_genes":["SJAG_01648","SJAG_01832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93258,104178],"is_not":false,"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0004527","GO:0140097","GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"double-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.3"],"synonyms":[{"name":"double-stranded DNA 5'-3' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0051908","terms_by_termid":{"GO:0051908":null}}


id: PBO:0003554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad1","termid":"PBO:0003554"}


id: PBO:0087809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation","termid":"PBO:0087809"}


id: GO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine in mRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine in mRNA.","definition_xrefs":["PMID:29072297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"mRNA (adenine-N1-)-methyltransferase activity","termid":"GO:0061953"}


id: PBO:0062341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily J member 1","termid":"PBO:0062341"}


id: GO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the adrenal cortex. This process pertains to the initial formation of a structure from unspecified parts. The adrenogonadal primordium from which the adrenal cortex is formed derives from a condensation of coelomic epithelial cells (the urogenital ridge; the same structure from which gonads and kidney also originate).","definition_xrefs":["PMID:21115154","PMID:12185666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"adrenal cortex development","termid":"GO:0035801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex formation","synonyms":[{"name":"adrenal gland cortex formation","type":"exact"}],"termid":"GO:0035802"}


id: PBO:0075510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 1","termid":"PBO:0075510"}


id: GO:0000001
data:
  {"annotated_genes":["SJAG_02848","SJAG_00079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85857,99038],"is_not":false,"summary":null,"term":"GO:0000001"}]},"cv_name":"biological_process","definition":"The distribution of mitochondria, including the mitochondrial genome, into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PMID:10873824","PMID:11389764","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"},{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0051179"],"is_obsolete":false,"name":"mitochondrion inheritance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial inheritance","type":"exact"}],"termid":"GO:0000001","terms_by_termid":{"GO:0000001":null}}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: PBO:0058697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6825","termid":"PBO:0058697"}


id: PR:Q9US26
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.03","synonyms":[{"name":"Spom972h-fta2","type":"exact"},{"name":"sim4 complex subunit fta2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US26"}


id: PBO:0047009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A12, pseudogene","termid":"PBO:0047009"}


id: GO:0033150
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large cytoskeletal structure located at the posterior end of the perinuclear theca of a mammalian sperm head. The nucleus is tightly associated with the calyx, which contains calicin and basic cylicin proteins.","definition_xrefs":["PMID:12243744","PMID:9184090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"perinuclear theca","termid":"GO:0033011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoskeletal calyx","termid":"GO:0033150"}


id: PBO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor B","termid":"PBO:0080189"}


id: PBO:0029187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_actin_filament_binding","termid":"PBO:0029187"}


id: PBO:0054107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1472","termid":"PBO:0054107"}


id: PBO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 220 member B, pseudogene","termid":"PBO:0047208"}


id: PR:000050453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, MOD:00047.","definition_xrefs":["PMID:12931193","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/Phos:(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"Spom-rnc1/Phos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, MOD:00047","type":"narrow"},{"name":"rnc1/Phos:(T50)","type":"exact"}],"termid":"PR:000050453"}


id: GO:0009250
data:
  {"annotated_genes":["SJAG_01288","SJAG_04462","SJAG_04483","SJAG_03057","SJAG_04236","SJAG_02590","SJAG_04666","SJAG_00424","SJAG_01209","SJAG_04771","SJAG_05285","SJAG_02916","SJAG_02222","SJAG_03123","SJAG_01787","SJAG_03705","SJAG_01453","SJAG_00876","SJAG_04073","SJAG_04184","SJAG_01376","SJAG_01835","SJAG_04509","SJAG_00771","SJAG_03587","SJAG_02446","SJAG_01290","SJAG_04668","SJAG_02278","SJAG_04469","SJAG_00218","SJAG_00610","SJAG_00963","SJAG_01028"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75757,113247,74514,98717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[90517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[70610,72987,77564,71418,72814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[112503,109765,105758,87517,87507,104194,102473,83883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[105051,98909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[105341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[76186,77600,102771],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88383,83315],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83707],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[101690,88369,114620,86675,99120],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[91009,85311,99122,88389],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04469":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glucan anabolism","type":"exact"},{"name":"glucan biosynthesis","type":"exact"},{"name":"glucan formation","type":"exact"},{"name":"glucan synthesis","type":"exact"}],"termid":"GO:0009250","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0033800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a 7-hydroxyisoflavone = S-adenosyl-L-homocysteine + a 7-methoxyisoflavone.","definition_xrefs":["EC:2.1.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"isoflavone 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6241","RHEA:17933"],"synonyms":[{"name":"S-adenosyl-L-methionine:hydroxyisoflavone 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033800"}


id: PBO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurs_in","termid":"PBO:0000008"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: PBO:0038910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E5","termid":"PBO:0038910"}


id: PBO:0067736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 35","termid":"PBO:0067736"}


id: PBO:0079946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 1","termid":"PBO:0079946"}


id: GO:1900384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flavonol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"regulates","term_name":"flavonol biosynthetic process","termid":"GO:0051555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flavonol biosynthetic process","termid":"GO:1900384"}


id: PR:000027580
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2 (Schizosaccharomyces pombe)","termid":"PR:000027572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-","type":"exact"}],"termid":"PR:000027580"}


id: GO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment.","definition_xrefs":["GOC:jl","PMID:11752666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"part_of","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular accumulation of glycerol","termid":"GO:0006973"}


id: GO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of transcription as a part of the process of egg activation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in egg activation (obsolete GO:0060469)","synonyms":[{"name":"activation of the egg genome","type":"related"},{"name":"activation of the maternal genome","type":"related"}],"termid":"GO:0060469"}


id: PBO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD dependent oxidoreductase domain containing 2","termid":"PBO:0047839"}


id: PBO:0071989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 18","termid":"PBO:0071989"}


id: PBO:0068091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 397","termid":"PBO:0068091"}


id: GO:0061586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355","GO:0051179"],"is_obsolete":false,"name":"positive regulation of transcription by transcription factor localization","termid":"GO:0061586"}


id: PBO:0041462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 95","termid":"PBO:0041462"}


id: PBO:0041562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 81","termid":"PBO:0041562"}


id: PBO:0044019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSNK1G2 antisense RNA 1","termid":"PBO:0044019"}


id: RO:HOM0000029
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Heterochronous homology that is produced by a retention in adults of a species of traits previously seen only in juveniles.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_heterochronous_homology_relationship_with","termid":"RO:HOM0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paedomorphorsis_relationship_with","synonyms":[{"name":"juvenification","type":"exact"},{"name":"pedomorphosis","type":"exact"}],"termid":"RO:HOM0000029"}


id: PBO:0048302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 1","termid":"PBO:0048302"}


id: GO:0070842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an aggresome; requires the microtubule cytoskeleton and dynein.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:14675537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"aggresome assembly","termid":"GO:0070842"}


id: PBO:0046201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3, pseudogene","termid":"PBO:0046201"}


id: PBO:0029096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cysteine_synthase_activity","termid":"PBO:0029096"}


id: PBO:0063630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 8","termid":"PBO:0063630"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: GO:2000748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation rhythm.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defecation","termid":"GO:2000294"},{"relation_name":"is_a","term_name":"regulation of defecation rhythm","termid":"GO:2000746"},{"relation_name":"positively_regulates","term_name":"defecation rhythm","termid":"GO:0035882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of defecation rhythm","synonyms":[{"name":"positive regulation of DMP","type":"exact"},{"name":"positive regulation of defecation behavior","type":"related"},{"name":"positive regulation of defecation cycle","type":"exact"},{"name":"positive regulation of defecation motor program","type":"exact"}],"termid":"GO:2000748"}


id: PBO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUVBL2 pseudogene 1","termid":"PBO:0072703"}


id: PBO:0055088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2506","termid":"PBO:0055088"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: PBO:0088557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER farnesyl pyrophosphate synthetase Erg20","termid":"PBO:0088557"}


id: PBO:0064180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XG, pseudogene","termid":"PBO:0064180"}


id: GO:0035049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to juvenile hormone acid.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"juvenile hormone acid methyltransferase activity","termid":"GO:0035049"}


id: GO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructoseglycine, a fructose molecule containing a glycine group in place of a hydroxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructoseglycine metabolic process","synonyms":[{"name":"fructoseglycine metabolism","type":"exact"}],"termid":"GO:0030394"}


id: PBO:0068721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 10, pseudogene","termid":"PBO:0068721"}


id: PBO:0048377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 2","termid":"PBO:0048377"}


id: PBO:0058483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5590","termid":"PBO:0058483"}


id: PBO:0063969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 3","termid":"PBO:0063969"}


id: PR:Q9P7G8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0382 inner membrane protein YgdD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0382 membrane protein C1782.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.12c","secondary_identifiers":["UniProtKB:Q9P7G8"],"synonyms":[{"name":"Spom972h-ygdD","type":"exact"}],"termid":"PR:Q9P7G8"}


id: PBO:0074444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 45","termid":"PBO:0074444"}


id: GO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process directed at removing immune complexes from the body. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution.","definition_xrefs":["ISBN:068340007X","GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance","termid":"GO:0002434"}


id: PBO:0086128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086128"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: CHEBI:15422
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP","termid":"CHEBI:15422"}


id: GO:1905676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adaptive immune memory response.","definition_xrefs":["PMID:26831526","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response","termid":"GO:0002821"},{"relation_name":"is_a","term_name":"regulation of adaptive immune memory response","termid":"GO:1905674"},{"relation_name":"positively_regulates","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune memory response","synonyms":[{"name":"activation of adaptive immune memory response","type":"narrow"},{"name":"up regulation of adaptive immune memory response","type":"exact"},{"name":"up-regulation of adaptive immune memory response","type":"exact"},{"name":"upregulation of adaptive immune memory response","type":"exact"}],"termid":"GO:1905676"}


id: PBO:0038437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 3","termid":"PBO:0038437"}


id: PBO:0088789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GAP, hamartin Tsc1","termid":"PBO:0088789"}


id: PBO:0056379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 10","termid":"PBO:0056379"}


id: FYPO:0008021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing alanine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:7903653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0005447","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on alanine nitrogen source","synonyms":[{"name":"decreased growth on alanine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on alanine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with alanine nitrogen source","type":"narrow"},{"name":"reduced cell population growth on alanine nitrogen source","type":"exact"},{"name":"slow cell growth on alanine nitrogen source","type":"narrow"}],"termid":"FYPO:0008021"}


id: PBO:0073176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein H","termid":"PBO:0073176"}


id: PBO:0061459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin related anchoring protein","termid":"PBO:0061459"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: GO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of movement of mRNA from the nucleus to the cytoplasm in the host organism.","definition_xrefs":["VZ:902","GOC:bf","UniProtKB-KW:KW-1099","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"},{"relation_name":"is_a","term_name":"modulation by symbiont of host intracellular transport","termid":"GO:0052038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"suppression by virus of host mRNA export from nucleus","synonyms":[{"name":"inhibition by virus of host mRNA nuclear export","type":"exact"},{"name":"inhibition of host mRNA nuclear export by virus","type":"exact"},{"name":"negative regulation by virus of host mRNA nuclear export","type":"broad"},{"name":"suppression of host mRNA nuclear export by virus","type":"exact"}],"termid":"GO:0039522"}


id: GO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+.","definition_xrefs":["EC:1.3.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"precorrin-6A reductase activity","secondary_identifiers":["MetaCyc:1.3.1.54-RXN","RHEA:23408"],"synonyms":[{"name":"precorrin-6B:NADP+ oxidoreductase activity","type":"related"},{"name":"precorrin-6X reductase activity","type":"exact"},{"name":"precorrin-6Y:NADP(+) oxidoreductase activity","type":"related"},{"name":"precorrin-6Y:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0016994"}


id: GO:0043330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dsRNA","termid":"GO:0043331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to exogenous dsRNA","synonyms":[{"name":"response to exogenous double-stranded RNA","type":"exact"},{"name":"response to viral dsRNA","type":"narrow"}],"termid":"GO:0043330"}


id: PBO:0085678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in producing mature rRNAs and snoRNAs; involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA","termid":"PBO:0085678"}


id: FYPO:0001079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal galactomannan level","synonyms":[{"name":"normal cellular galactomannan level","type":"exact"},{"name":"normal galactomannan accumulation","type":"related"},{"name":"normal galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001079"}


id: GO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a bitter taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of bitter taste","synonyms":[{"name":"bitter taste detection","type":"exact"},{"name":"perception of bitter taste, detection of chemical stimulus","type":"exact"},{"name":"perception of bitter taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of bitter taste","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of bitter taste","type":"exact"},{"name":"sensory transduction of bitter taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of bitter taste","type":"exact"}],"termid":"GO:0001580"}


id: GO:0140701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(3'-5') (cyclic 3',3' GAMP).","definition_xrefs":["PMID:30787435","RHEA:35647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"3',3'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',3' cyclic-GAMP synthase activity","type":"exact"},{"name":"3',3' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',3'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140701"}


id: GO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular organelle part (obsolete GO:0044446)","termid":"GO:0044446"}


id: PBO:0088523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5","termid":"PBO:0088523"}


id: GO:0044010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of the same species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:tb","GOC:di","GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation","secondary_identifiers":["GO:0052000"],"synonyms":[{"name":"auto-aggregation","type":"broad"},{"name":"bfp-dependent aggregation","type":"narrow"},{"name":"bundle-forming fimbriae-dependent aggregation","type":"narrow"},{"name":"bundle-forming pili-dependent aggregation","type":"narrow"},{"name":"tfp-dependent aggregation","type":"narrow"},{"name":"type IV pili-dependent aggregation","type":"narrow"}],"termid":"GO:0044010"}


id: FYECO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lead ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Pb ions","synonyms":[{"name":"lead ions added","type":"exact"}],"termid":"FYECO:0000036"}


id: GO:0030403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete collagenase 4 activity (obsolete GO:0030403)","synonyms":[{"name":"MMP-18","type":"narrow"},{"name":"collagenase 4 activity","type":"exact"},{"name":"matrix metalloproteinase 18","type":"exact"}],"termid":"GO:0030403"}


id: PBO:0031724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_recombination","termid":"PBO:0031724"}


id: SO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Base sequence at the 3' end of a tRNA. The 3'-hydroxyl group on the terminal adenosine is the attachment point for the amino acid.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA_tail","synonyms":[{"name":"CCA sequence","type":"exact"},{"name":"CCA tail","type":"exact"}],"termid":"SO:0001175"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: PBO:0041936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 4","termid":"PBO:0041936"}


id: PBO:0039292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG8 alpha-1,3-glucosyltransferase","termid":"PBO:0039292"}


id: PBO:0052013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD1C antisense RNA 2","termid":"PBO:0052013"}


id: GO:0009092
data:
  {"annotated_genes":["SJAG_02205","SJAG_04305","SJAG_03671","SJAG_00395","SJAG_03152","SJAG_00881","SJAG_02290","SJAG_03102","SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75295,75329],"is_not":false,"summary":null,"term":"GO:0009092"},{"annotations":[73177,71113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[96888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[106982,74609,77996,70607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019346"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_00881":null,"SJAG_02205":null,"SJAG_02290":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03671":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"homoserine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"homoserine metabolism","type":"exact"}],"termid":"GO:0009092","terms_by_termid":{"GO:0009090":null,"GO:0009092":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019346":null}}


id: PBO:0029907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K4_methylation","termid":"PBO:0029907"}


id: GO:1904883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomerase catalytic core complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rph","GOC:BHF_telomere","GOC:TermGenie","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of telomerase catalytic core complex assembly","termid":"GO:1904882"},{"relation_name":"negatively_regulates","term_name":"telomerase catalytic core complex assembly","termid":"GO:1904868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"negative regulation of telomerase catalytic core complex assembly","synonyms":[{"name":"down regulation of TERT-TERC complex assembly","type":"related"},{"name":"down regulation of TERT-TERC complex formation","type":"related"},{"name":"down regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"down regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"down-regulation of TERT-TERC complex assembly","type":"related"},{"name":"down-regulation of TERT-TERC complex formation","type":"related"},{"name":"down-regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"down-regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"downregulation of TERT-TERC complex assembly","type":"related"},{"name":"downregulation of TERT-TERC complex formation","type":"related"},{"name":"downregulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"downregulation of telomerase catalytic core complex formation","type":"exact"},{"name":"inhibition of TERT-TERC complex assembly","type":"related"},{"name":"inhibition of TERT-TERC complex formation","type":"related"},{"name":"inhibition of telomerase catalytic core complex assembly","type":"narrow"},{"name":"inhibition of telomerase catalytic core complex formation","type":"narrow"},{"name":"negative regulation of TERT-TERC complex assembly","type":"related"},{"name":"negative regulation of TERT-TERC complex formation","type":"related"},{"name":"negative regulation of telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904883"}


id: PBO:0083944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl phosphate reductase; catalyzes the second step in proline biosynthesis","termid":"PBO:0083944"}


id: GO:0014874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"},{"relation_name":"part_of","term_name":"regulation of muscle adaptation","termid":"GO:0043502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014874"}


id: GO:1905451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["PMID:18832707","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060369"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"positively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"activation of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"activation of IgG-mediated phagocytosis","type":"narrow"},{"name":"positive regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"positive regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"positive regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"positive regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"upregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"upregulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905451"}


id: PBO:0082707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic19p is peripheral to the inner membrane and may connect Mic60p with the Mic10p-Mic12p-Mic27p subcomplex; both yeast and human Mic19p become oxidized, and oxidation may regulate MICOS","termid":"PBO:0082707"}


id: SO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that has been generated to act as a vector for foreign sequence.","direct_ancestors":[{"relation_name":"derives_from","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_vector","secondary_identifiers":["http://en.wikipedia.org/wiki/Plasmid_vector#Vectors"],"synonyms":[{"name":"plasmid vector","type":"exact"}],"termid":"SO:0000755"}


id: GO:0005012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Neu/ErbB-2 receptor activity (obsolete GO:0005012)","synonyms":[{"name":"Neu/ErbB-2 receptor activity","type":"exact"}],"termid":"GO:0005012"}


id: PATO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hairy quality inhering in a bearer by virtue of the bearer's being covered with setae.","definition_xrefs":["ISBN:0913424137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setose","termid":"PATO:0002289"}


id: FYPO:0004639
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; 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growth","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_03575","SJAG_03689","SJAG_01834","SJAG_01143","SJAG_02819","SJAG_02763","SJAG_04551","SJAG_04332","SJAG_03453","SJAG_01745","SJAG_04703","SJAG_02592","SJAG_04522","SJAG_03351","SJAG_00426","SJAG_03048","SJAG_00266","SJAG_01956","SJAG_04697","SJAG_02392","SJAG_00514","SJAG_03581","SJAG_00028","SJAG_03449","SJAG_04464","SJAG_04312","SJAG_01906","SJAG_00118","SJAG_02013","SJAG_03940","SJAG_04280"],"single_locus_genotype_uniquenames":["man1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","scd1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","lem2delta","ned1delta","atf1delta","dcr1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","nem2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pmk1delta","mid1delta","gef1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","pka1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","efc25delta","rga6delta","ras1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","sty1delta","for3delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pom152delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular physical object quality during vegetative growth","type":"exact"},{"name":"abnormal cellular physical quality phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004639","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000356":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001877":null,"FYPO:0002026":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0004205":null,"FYPO:0004295":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0006433":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0064944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRC2 and DDX5 associated lncRNA","termid":"PBO:0064944"}


id: PBO:0012842
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renal cell cancer","termid":"PBO:0012842"}


id: PBO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12A","termid":"PBO:0051561"}


id: GO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent modification of peptidyl-lysine by biotin to form peptidyl-N6-biotinyl-L-lysine.","definition_xrefs":["RESID:AA0117"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine biotinylation (obsolete GO:0018054)","termid":"GO:0018054"}


id: PBO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Val (TAC) 1-1","termid":"PBO:0061189"}


id: GO:0046949
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006629","GO:0006790"],"is_obsolete":false,"name":"fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA biosynthetic process","type":"exact"},{"name":"fatty-acyl-CoA anabolism","type":"exact"},{"name":"fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"fatty-acyl-CoA formation","type":"exact"},{"name":"fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0046949","terms_by_termid":{"GO:0035338":null}}


id: PBO:0057362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ae-2","termid":"PBO:0057362"}


id: GO:0022011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"Schwann cell development","termid":"GO:0014044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination in peripheral nervous system","synonyms":[{"name":"peripheral nervous system myelination","type":"exact"}],"termid":"GO:0022011"}


id: PBO:0084536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; interacts physically and genetically with Prp19p","termid":"PBO:0084536"}


id: FYPO:0009019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which the poportion of cells with two nuclei is higher than normal.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population binucleate index","synonyms":[{"name":"higher proportion of binucleate cells during vegetative growth","type":"exact"},{"name":"more cells with two nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0009019"}


id: PBO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4 pseudogene 1","termid":"PBO:0045720"}


id: GO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"positively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of amino acid metabolic process","synonyms":[{"name":"activation of amino acid metabolic process","type":"narrow"},{"name":"positive regulation of amino acid metabolism","type":"exact"},{"name":"positive regulation of cellular amino acid metabolic process","type":"exact"},{"name":"stimulation of amino acid metabolic process","type":"narrow"},{"name":"up regulation of amino acid metabolic process","type":"exact"},{"name":"up-regulation of amino acid metabolic process","type":"exact"},{"name":"upregulation of amino acid metabolic process","type":"exact"}],"termid":"GO:0045764"}


id: GO:0003361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron that is part of the brainstem.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"},{"relation_name":"part_of","term_name":"brainstem development","termid":"GO:0003360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron differentiation involved in brainstem development","termid":"GO:0003361"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: GO:0102846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:3-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-18:3-2-16:1-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["MetaCyc:RXN-8308"],"termid":"GO:0102846"}


id: PBO:0030779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methyl_methanesulfonate","termid":"PBO:0030779"}


id: PBO:0056559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 7","termid":"PBO:0056559"}


id: GO:0070531
data:
  {"annotated_genes":["SJAG_04611"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109576],"is_not":false,"summary":null,"term":"GO:0070531"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, RAP80/UIMC1, BRCC3/BRCC36, BRE/BRCC45, FAM175A/CCDC98/Abraxas and MERIT40/NBA1, and specifically recognizes and binds K63-linked polyubiquitin chains present on histone H2A and H2AX at DNA damage sites.","definition_xrefs":["GOC:mah","PMID:19261749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BRCA1-A complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070531","terms_by_termid":{"GO:0070531":null}}


id: GO:1900857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fumitremorgin B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fumitremorgin B biosynthetic process (obsolete GO:1900857)","synonyms":[{"name":"up regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"up-regulation of fumitremorgin B biosynthetic process","type":"exact"},{"name":"upregulation of fumitremorgin B biosynthetic process","type":"exact"}],"termid":"GO:1900857"}


id: GO:1902884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to oxidative stress.","definition_xrefs":["GOC:kmv","PMID:16899554","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"positively_regulates","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to oxidative stress","synonyms":[{"name":"activation of response to oxidative stress","type":"narrow"},{"name":"up regulation of response to oxidative stress","type":"exact"},{"name":"up-regulation of response to oxidative stress","type":"exact"},{"name":"upregulation of response to oxidative stress","type":"exact"}],"termid":"GO:1902884"}


id: GO:0030108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-A subclass to mediate signaling that activates a lymphocyte.","definition_xrefs":["GOC:add","GOC:mah","PMID:11929129","PMID:9368779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activating MHC class I receptor activity","termid":"GO:0032397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-A specific activating MHC class I receptor activity","termid":"GO:0030108"}


id: FYPO:0004624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which equatorial microtubule organizing center (eMTOC) assembly does not occur. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PMID:15004232","PomBase:mah","GO:1904185"],"direct_ancestors":[{"relation_name":"has_output","term_name":"eMTOC absent from cell","termid":"FYPO:0005687"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal eMTOC assembly","termid":"FYPO:0005690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished eMTOC assembly","synonyms":[{"name":"abolished eMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abolished eMTOC assembly during vegetative growth","type":"exact"},{"name":"abolished eMTOC formation","type":"exact"},{"name":"abolished equatorial microtubule organizing center assembly","type":"exact"},{"name":"abolished equatorial microtubule organizing center formation","type":"exact"},{"name":"eMTOC abolished","type":"exact"}],"termid":"FYPO:0004624"}


id: PBO:0027880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_monomethylation","termid":"PBO:0027880"}


id: GO:0009551
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmodesma with a branched structure, often with many channels leading into a larger central cavity; found in older tissues and usually derived from preexisting primary plasmodesmata.","definition_xrefs":["PMID:15012255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"secondary plasmodesma","termid":"GO:0009551"}


id: PBO:0038456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis antagonizing transcription factor","termid":"PBO:0038456"}


id: GO:0019894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.","definition_xrefs":["PMID:8606779","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kinesin binding","termid":"GO:0019894"}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: PBO:0088255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3","termid":"PBO:0088255"}


id: BFO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","termid":"BFO:0000063"}


id: PBO:0079059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 14-1","termid":"PBO:0079059"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:inorganic phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycerone phosphate:inorganic phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: MOD:01351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a nitrated L-tryptophan.","definition_xrefs":["PubMed:8839040","OMSSA:85","PubMed:9252331","Unimod:354#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tryptophan","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitrow","type":"exact"}],"termid":"MOD:01351"}


id: FYECO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CdSO4","synonyms":[{"name":"+ cadmium sulfate","type":"related"}],"termid":"FYECO:0000247"}


id: GO:1990135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated flavonoid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a flavonoid acceptor, producing the sulfated flavonoid derivative.","definition_xrefs":["PMID:23611783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"flavonoid sulfotransferase activity","termid":"GO:1990135"}


id: PBO:0108562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 And Mei2-associated RNA","termid":"PBO:0108562"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: PBO:0071546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 11","termid":"PBO:0071546"}


id: PBO:0059239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 2","termid":"PBO:0059239"}


id: PBO:0027008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_ascospore_wall","termid":"PBO:0027008"}


id: PBO:0084210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoaconitase; catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lysine biosynthesis pathway","termid":"PBO:0084210"}


id: GO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm formation","termid":"GO:0048341"}


id: PBO:0054113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1478","termid":"PBO:0054113"}


id: PBO:0041963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 6","termid":"PBO:0041963"}


id: GO:0042110
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84157],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0050870"}]},"cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T lymphocyte activation","type":"exact"},{"name":"T-cell activation","type":"exact"},{"name":"T-lymphocyte activation","type":"exact"}],"termid":"GO:0042110","terms_by_termid":{"GO:0050870":null}}


id: GO:0034103
data:
  {"annotated_genes":["SJAG_02032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046850"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tissue remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034103","terms_by_termid":{"GO:0046850":null}}


id: PBO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt4","termid":"PBO:0018058"}


id: FYPO:0001542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nickel ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular nickel level","synonyms":[{"name":"normal cellular nickel accumulation","type":"related"},{"name":"normal cellular nickel ion level","type":"exact"},{"name":"normal cellular nickel level during mitotic cell cycle","type":"related"},{"name":"normal cellular nickel level during vegetative growth","type":"exact"}],"termid":"FYPO:0001542"}


id: PBO:0069979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1274, pseudogene","termid":"PBO:0069979"}


id: PBO:0027939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_reactive_oxygen_species_level_in_stationary_phase","termid":"PBO:0027939"}


id: GO:1900538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucose homeostasis (obsolete GO:1900538)","synonyms":[{"name":"activation of glucose homeostasis","type":"narrow"},{"name":"positive regulation of glucose homeostasis","type":"exact"},{"name":"up regulation of glucose homeostasis","type":"exact"},{"name":"up-regulation of glucose homeostasis","type":"exact"},{"name":"upregulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900538"}


id: GO:0043884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + corrinoid protein = CO + methylcorrinoid protein + CoA.","definition_xrefs":["PMID:1748656","EC:2.3.1.169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CO-methylating acetyl-CoA synthase activity","secondary_identifiers":["MetaCyc:ACETYLSYNCLTH-RXN","RHEA:45212"],"synonyms":[{"name":"ACS","type":"related"},{"name":"CO-methylating acetyl-coenzyme A synthase activity","type":"exact"},{"name":"acetyl-CoA synthase activity","type":"broad"},{"name":"acetyl-CoA:corrinoid protein O-acetyltransferase activity","type":"exact"}],"termid":"GO:0043884"}


id: PBO:0077400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM132E divergent transcript","termid":"PBO:0077400"}


id: GO:0016839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-oxygen bond. Enzymes with this activity are 'miscellaneous' carbon-oxygen lyases that cannot be grouped into one of the specific subclasses of the carbon-oxygen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-oxygen lyase activity (obsolete GO:0016839)","synonyms":[{"name":"other carbon-oxygen lyase activity","type":"exact"}],"termid":"GO:0016839"}


id: PBO:0055161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2580","termid":"PBO:0055161"}


id: GO:0071952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of O-phosphoserine charged on a tRNA(Cys) to cysteinyl-tRNA.","definition_xrefs":["PMID:17351629","PMID:18559341","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA","termid":"GO:0071952"}


id: PBO:0029998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies","termid":"PBO:0029998"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: PBO:0069680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 957, pseudogene","termid":"PBO:0069680"}


id: FYPO:0002792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, but smaller, vacuoles than normal during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"output_of","term_name":"abnormal vacuole fusion during cellular hypotonic response","termid":"FYPO:0004483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during cellular hypotonic response","synonyms":[{"name":"fragmented vacuoles during cellular hypotonic response","type":"related"},{"name":"small vacuoles present in greater numbers during cellular hypotonic response","type":"exact"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"small vacuoles present in increased numbers during hypotonic stress","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002792"}


id: PBO:0049820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 11","termid":"PBO:0049820"}


id: PR:Q09829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf5 gene.","definition_xrefs":["UniProtKB:Q09829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C4G8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.03c","synonyms":[{"name":"Spom972h-puf5","type":"exact"}],"termid":"PR:Q09829"}


id: GO:1900116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of signal transduction that takes place in extracellular region.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"extracellular regulation of signal transduction","termid":"GO:1900115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular negative regulation of signal transduction","synonyms":[{"name":"down regulation of signal transduction in extracellular region","type":"exact"},{"name":"down-regulation of signal transduction in extracellular region","type":"exact"},{"name":"downregulation of signal transduction in extracellular region","type":"exact"},{"name":"extracellular inhibition of signaling pathway","type":"narrow"},{"name":"inhibition of signal transduction in extracellular region","type":"narrow"},{"name":"negative regulation of signaling pathway in extracellular region","type":"exact"},{"name":"negative regulation of signalling pathway in extracellular region","type":"exact"}],"termid":"GO:1900116"}


id: GO:0043829
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71590],"is_not":false,"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine-37 + H2O = inosine-37 + NH3, in a tRNA-Ala molecule.","definition_xrefs":["RHEA:50968","PMID:8915538","PMID:9707437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific adenosine deaminase activity","termid":"GO:0008251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"tRNA-specific adenosine-37 deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.5.4.34"],"synonyms":[{"name":"TAD1","type":"related"},{"name":"tRNA(Ala)-A37 deaminase activity","type":"exact"},{"name":"tRNA-specific adenosine deaminase 1","type":"exact"}],"termid":"GO:0043829","terms_by_termid":{"GO:0043829":null}}


id: PBO:0027250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dimethyl_sulfoxide","termid":"PBO:0027250"}


id: GO:0052876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2O + methylamine + 2 oxidized [amicyanin] = formaldehyde + 2 H+ + NH4+ + 2 reduced [amicyanin].","definition_xrefs":["RHEA:30207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","termid":"GO:0052877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylamine dehydrogenase (amicyanin) activity","secondary_identifiers":["KEGG_REACTION:R00606","UM-BBD_reactionID:r0075","EC:1.4.9.1"],"synonyms":[{"name":"MADH activity","type":"broad"},{"name":"amine dehydrogenase","type":"broad"},{"name":"methylamine dehydrogenase activity","type":"exact"},{"name":"methylamine:amicyanin oxidoreductase (deaminating) activity","type":"exact"},{"name":"primary-amine dehydrogenase","type":"broad"}],"termid":"GO:0052876"}


id: PBO:0033803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_DNA_double-strand_break","termid":"PBO:0033803"}


id: PBO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 1","termid":"PBO:0061518"}


id: PBO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 3","termid":"PBO:0047687"}


id: PATO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000267 relative visual_acuity (obsolete PATO:0000267)","termid":"PATO:0000267"}


id: PBO:0062622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 1 pseudogene","termid":"PBO:0062622"}


id: GO:0050150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + H+ = catechol + CO2.","definition_xrefs":["RHEA:21492","EC:4.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"o-pyrocatechuate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0579","GO:0018790","KEGG_REACTION:R00821","MetaCyc:O-PYROCATECHUATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"2,3-DHBA decarboxylase activity","type":"related"},{"name":"2,3-dihydroxybenzoate carboxy-lyase (catechol-forming)","type":"related"},{"name":"2,3-dihydroxybenzoate carboxy-lyase activity","type":"related"},{"name":"2,3-dihydroxybenzoate decarboxylase activity","type":"exact"},{"name":"2,3-dihydroxybenzoic acid decarboxylase activity","type":"related"}],"termid":"GO:0050150"}


id: GO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An defense response against a fungus mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:dph","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal innate immune response","termid":"GO:0061760"}


id: PR:O42940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.04 gene.","definition_xrefs":["UniProtKB:O42940","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transport protein pho88 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.04","synonyms":[{"name":"Spom972h-SPBC16H5.04","type":"exact"},{"name":"phosphate metabolism protein pho88 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42940"}


id: PBO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 13","termid":"PBO:0070989"}


id: PBO:0088636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease, involved in lipid metabolism","termid":"PBO:0088636"}


id: PBO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 2","termid":"PBO:0062229"}


id: PR:O42663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized but2-like protein C27D7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.09c","synonyms":[{"name":"Spom972h-SPAC27D7.09c","type":"exact"}],"termid":"PR:O42663"}


id: PBO:0059115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 RISC complex RNA helicase","termid":"PBO:0059115"}


id: PBO:0078895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 6-1","termid":"PBO:0078895"}


id: GO:1903232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["GOC:PARL","GO_REF:0000079","GOC:TermGenie","GOC:bf","PMID:22511774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanosome organization","termid":"GO:0032438"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"melanosome assembly","synonyms":[{"name":"melanosome formation","type":"exact"}],"termid":"GO:1903232"}


id: PBO:0071724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 22","termid":"PBO:0071724"}


id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: PBO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4","termid":"PBO:0090397"}


id: PBO:0045434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L2 pseudogene 2","termid":"PBO:0045434"}


id: PBO:0029114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_process","termid":"PBO:0029114"}


id: GO:0072051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure that lies adjacent to the glomerulus and regulates kidney function.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerular apparatus development","termid":"GO:0072051"}


id: GO:2001221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G2 phase of mitotic cell cycle (obsolete GO:2001221)","synonyms":[{"name":"positive regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001221"}


id: GO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031630"}


id: PBO:0087061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2B; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2B has a paralog, RPL2A, that arose from the whole genome duplication; expression is upregulated at low temperatures","termid":"PBO:0087061"}


id: GO:1990584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.","definition_xrefs":["GOC:ame","PMID:12840750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"troponin complex","termid":"GO:0005861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"cardiac Troponin complex","synonyms":[{"name":"cTnC:cTnI:cTnT","type":"related"}],"termid":"GO:1990584"}


id: GO:0071560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:ecd","PMID:15451575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to transforming growth factor beta","termid":"GO:0071559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"cellular response to TGF-beta stimulus","type":"exact"},{"name":"cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:0071560"}


id: PBO:0083644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongase I, medium-chain acyl elongase; catalyzes carboxy-terminal elongation of unsaturated C12-C16 fatty acyl-CoAs to C16-C18 fatty acids; ELO1 has a paralog, ELO2, that arose from the whole genome duplication","termid":"PBO:0083644"}


id: GO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 8 O-glycan structure, Gal-alpha-(1->3)-GalNAc.","definition_xrefs":["PMID:10580130","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing, core 8","termid":"GO:0031044"}


id: PBO:0036533
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ3","termid":"PBO:0036533"}


id: GO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"zygospore formation","termid":"GO:0034296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of zygospore formation","termid":"GO:0075298"}


id: PBO:0068231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 2","termid":"PBO:0068231"}


id: PBO:0068674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 55, pseudogene","termid":"PBO:0068674"}


id: PBO:0109810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCL family member 3","termid":"PBO:0109810"}


id: PR:O43125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein csh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.05c","synonyms":[{"name":"Spom972h-lsb1","type":"exact"}],"termid":"PR:O43125"}


id: GO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of polygalacturonase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0004857","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"polygalacturonase inhibitor activity","termid":"GO:0090353"}


id: SO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a primary transcript that is transcribed, but removed from within the transcript by splicing together the sequences (exons) on either side of it.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Intron"],"synonyms":[{"name":"INSDC_feature:intron","type":"exact"}],"termid":"SO:0000188"}


id: GO:0031968
data:
  {"annotated_genes":["SJAG_03328","SJAG_03175","SJAG_00605","SJAG_01212","SJAG_00655","SJAG_01134","SJAG_01305","SJAG_04370","SJAG_05268","SJAG_03358","SJAG_02543","SJAG_00880","SJAG_03710","SJAG_01780","SJAG_02265","SJAG_01357","SJAG_04996","SJAG_00754","SJAG_02084","SJAG_00699","SJAG_03464","SJAG_03416","SJAG_00428","SJAG_00048","SJAG_00810","SJAG_03235","SJAG_00219","SJAG_04270","SJAG_00569","SJAG_00265","SJAG_00270","SJAG_00031","SJAG_04759","SJAG_00368","SJAG_02848","SJAG_03415","SJAG_01951","SJAG_03345","SJAG_04203","SJAG_02361","SJAG_00812","SJAG_01260","SJAG_00999","SJAG_01880","SJAG_01312","SJAG_03435","SJAG_02355","SJAG_02641","SJAG_03502","SJAG_04732","SJAG_00235","SJAG_05259","SJAG_04907","SJAG_01929","SJAG_03515","SJAG_00948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85114,101155,112443],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[100793,112444,102967,85117,98766,95448,96734,101156],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[78521,103925,113315,70116,104063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[103609],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[106878,108318],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[104126,92199,100941,83887,70874,102293,102169,84901,87870,97703,114386,101029,102355,87839,72583,74267,115491,91531,97021,93015,105733,108833,88088,72241,97575,105319,99031,114287,71534,100688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005741"},{"annotations":[103978,95618,86804,70505,95725,102546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005742"},{"annotations":[84357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"},{"annotations":[73005,94751,86267,70121],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"organelle envelope","termid":"GO:0031967"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00048":null,"SJAG_00219":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00270":null,"SJAG_00368":null,"SJAG_00428":null,"SJAG_00569":null,"SJAG_00605":null,"SJAG_00655":null,"SJAG_00699":null,"SJAG_00754":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00880":null,"SJAG_00948":null,"SJAG_00999":null,"SJAG_01134":null,"SJAG_01212":null,"SJAG_01260":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01357":null,"SJAG_01780":null,"SJAG_01880":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02084":null,"SJAG_02265":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02543":null,"SJAG_02641":null,"SJAG_02848":null,"SJAG_03175":null,"SJAG_03235":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03464":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04203":null,"SJAG_04270":null,"SJAG_04370":null,"SJAG_04732":null,"SJAG_04759":null,"SJAG_04907":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle outer membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031968","terms_by_termid":{"GO:0001401":null,"GO:0005640":null,"GO:0005741":null,"GO:0005742":null,"GO:0031315":null,"GO:0032473":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null}}


id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: GO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior directed towards obtaining some goal, considered to be a learned response to a situation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instrumental aggressive behavior","synonyms":[{"name":"instrumental aggression","type":"exact"}],"termid":"GO:0002126"}


id: GO:0033227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dsRNA, double-stranded ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"dsRNA transport","termid":"GO:0033227"}


id: PBO:0109826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase Sgp1/Lcb3","termid":"PBO:0109826"}


id: GO:0046655
data:
  {"annotated_genes":["SJAG_01198","SJAG_03914","SJAG_01126","SJAG_02225","SJAG_02408","SJAG_00815","SJAG_00106","SJAG_04156","SJAG_01766","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71015,87209,90544],"is_not":false,"summary":null,"term":"GO:0046655"},{"annotations":[102452,104780,108967,110298,101276,86198,101128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"folic acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"folate metabolic process","type":"exact"},{"name":"folate metabolism","type":"exact"},{"name":"folic acid metabolism","type":"exact"},{"name":"vitamin B9 metabolic process","type":"exact"},{"name":"vitamin B9 metabolism","type":"exact"},{"name":"vitamin M metabolic process","type":"exact"},{"name":"vitamin M metabolism","type":"exact"}],"termid":"GO:0046655","terms_by_termid":{"GO:0046655":null,"GO:0046656":null}}


id: GO:1904715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["PMID:20176123","GO_REF:0000058","GOC:pad","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0030163","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated autophagy","synonyms":[{"name":"down regulation of CMA","type":"related"},{"name":"down regulation of chaperone-mediated autophagy","type":"exact"},{"name":"down-regulation of CMA","type":"related"},{"name":"down-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"downregulation of CMA","type":"related"},{"name":"downregulation of chaperone-mediated autophagy","type":"exact"},{"name":"inhibition of CMA","type":"related"},{"name":"inhibition of chaperone-mediated autophagy","type":"narrow"},{"name":"negative regulation of CMA","type":"related"}],"termid":"GO:1904715"}


id: GO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"}


id: PBO:0065900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB42, member RAS oncogene family, pseudogene 1","termid":"PBO:0065900"}


id: PBO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12B","termid":"PBO:0051563"}


id: PBO:0066255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 3","termid":"PBO:0066255"}


id: GO:0000472
data:
  {"annotated_genes":["SJAG_02250","SJAG_00772","SJAG_04224","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70378,72628,76887,105445],"is_not":false,"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00772":null,"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A1","type":"narrow"}],"termid":"GO:0000472","terms_by_termid":{"GO:0000472":null}}


id: PBO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein, HSR1-related (predicted)","termid":"PBO:0001769"}


id: PBO:0089998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr103","termid":"PBO:0089998"}


id: GO:0140603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + H+ Pi. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP hydrolysis activity (obsolete GO:0140603)","termid":"GO:0140603"}


id: FYPO:0002440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable distribution is abnormal. The process normally establishes the spatial arrangement of actin cables within the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable distribution","synonyms":[{"name":"abnormal actin cable distribution during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable distribution during vegetative growth","type":"exact"},{"name":"abnormal actin cable localization","type":"related"},{"name":"abnormal formin-nucleated actin cable distribution","type":"exact"}],"termid":"FYPO:0002440"}


id: PBO:0052578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinocilin","termid":"PBO:0052578"}


id: SO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA_gene","termid":"SO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_SSU_rRNA_gene","synonyms":[{"name":"mitochondrial small subunit rRNA gene","type":"exact"}],"termid":"SO:0002365"}


id: CHEBI:24431
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical entity","termid":"CHEBI:24431"}


id: PBO:0065899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB42, member RAS oncogene family","termid":"PBO:0065899"}


id: GO:0032246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a pyrimidine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"regulates","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine nucleoside transport","termid":"GO:0032246"}


id: GO:0097004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adipokinetic hormone. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["GOC:sart","PMID:11904407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"adipokinetic hormone binding","synonyms":[{"name":"AKH binding","type":"exact"}],"termid":"GO:0097004"}


id: PBO:0051891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2","termid":"PBO:0051891"}


id: PBO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein protein Pof1","termid":"PBO:0000932"}


id: GO:0060997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"is_a","term_name":"dendritic spine organization","termid":"GO:0097061"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine morphogenesis","termid":"GO:0060997"}


id: PBO:0079714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 1","termid":"PBO:0079714"}


id: PBO:0076980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T helper type 2 locus control region associated RNA","termid":"PBO:0076980"}


id: PBO:0029637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus","termid":"PBO:0029637"}


id: PBO:0062121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 49 pseudogene","termid":"PBO:0062121"}


id: PBO:0088202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family","termid":"PBO:0088202"}


id: PBO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase Ats1 (predicted)","termid":"PBO:0001193"}


id: PBO:0062079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 10 pseudogene","termid":"PBO:0062079"}


id: PBO:0055566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3002","termid":"PBO:0055566"}


id: GO:0070610
data:
  {"annotated_genes":["SJAG_02278","SJAG_04666","SJAG_00424","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85311,88389,91009,99122],"is_not":false,"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-alpha glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in fungal-type cell walls, including those of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall biogenesis","termid":"GO:0032995"},{"relation_name":"is_a","term_name":"regulation of cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070608"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070609"},{"relation_name":"regulates","term_name":"fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","termid":"GO:0070600"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"regulation of fungal-type cell wall (1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fungal type cell wall 1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan anabolism","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan formation","type":"exact"},{"name":"regulation of fungal-type cell wall 1,3-alpha-glucan synthesis","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan anabolism","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan biosynthesis","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan biosynthetic process","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan formation","type":"exact"},{"name":"regulation of fungal-type cell wall alpha-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0070610","terms_by_termid":{"GO:0070610":null}}


id: GO:0044781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum organization","termid":"GO:0044781"}


id: PBO:0053781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1031","termid":"PBO:0053781"}


id: GO:1905353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ciliary transition fiber.","definition_xrefs":["PMID:24189274","GO_REF:0000079","GOC:cilia","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"ciliary transition fiber assembly","synonyms":[{"name":"centriolar distal appendage assembly","type":"related"},{"name":"centriolar distal appendage formation","type":"related"},{"name":"cilial transition fiber assembly","type":"exact"},{"name":"cilial transition fiber formation","type":"exact"},{"name":"cilial transition fibre assembly","type":"exact"},{"name":"cilial transition fibre formation","type":"exact"},{"name":"ciliary transition fiber formation","type":"exact"},{"name":"ciliary transition fibre assembly","type":"exact"},{"name":"ciliary transition fibre formation","type":"exact"},{"name":"cilium transition fiber assembly","type":"exact"},{"name":"cilium transition fiber formation","type":"exact"},{"name":"cilium transition fibre assembly","type":"exact"},{"name":"cilium transition fibre formation","type":"exact"},{"name":"distal appendage of basal body assembly","type":"related"},{"name":"distal appendage of basal body formation","type":"related"},{"name":"distal appendage of centriole assembly","type":"related"},{"name":"distal appendage of centriole formation","type":"related"},{"name":"distal appendage of mother centriole assembly","type":"related"},{"name":"distal appendage of mother centriole formation","type":"related"}],"termid":"GO:1905353"}


id: SO:0001769
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality inhering in a variant by virtue of its phenotype.","definition_xrefs":["SO:ke","PMID:17597783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_phenotype","synonyms":[{"name":"variant phenotype","type":"exact"}],"termid":"SO:0001769"}


id: PBO:0089171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBP4H10.18c ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089171"}


id: GO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase II, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["GOC:txnOH","PMID:22982364","PMID:31628251","PMID:15020047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"RNA polymerase II promoter clearance","synonyms":[{"name":"promoter clearance from RNA polymerase II promoter","type":"exact"},{"name":"promoter escape from RNA polymerase II promoter","type":"exact"},{"name":"promoter-paused RNA polymerase II release","type":"exact"}],"termid":"GO:0001111"}


id: PBO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha","termid":"PBO:0050873"}


id: PBO:0034230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_postsynaptic_terminal_in","termid":"PBO:0034230"}


id: GO:0015629
data:
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id: GO:0010376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the stomatal complex. This process pertains to the initial formation of a structure from unspecified parts. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stomatal complex morphogenesis","termid":"GO:0010103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex formation","termid":"GO:0010376"}


id: FYPO:0003799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) in cells that are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding during recovery from nitrogen starvation","synonyms":[{"name":"normal chromatin binding during recovery from nitrogen depletion","type":"exact"},{"name":"normal chromatin binding during recovery from nitrogen deprivation","type":"related"}],"termid":"FYPO:0003799"}


id: PBO:0043451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 12","termid":"PBO:0043451"}


id: PBO:0088580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, glutamate/glycine","termid":"PBO:0088580"}


id: GO:0050357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atropine + H2O = H+ + tropate + tropine.","definition_xrefs":["RHEA:23304","EC:3.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tropinesterase activity","secondary_identifiers":["KEGG_REACTION:R03563","MetaCyc:TROPINESTERASE-RXN"],"synonyms":[{"name":"atropinase activity","type":"related"},{"name":"atropine acylhydrolase activity","type":"related"},{"name":"atropine esterase activity","type":"related"},{"name":"atropinesterase activity","type":"related"},{"name":"tropine esterase activity","type":"related"}],"termid":"GO:0050357"}


id: PBO:0089982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, meiosis specific","termid":"PBO:0089982"}


id: PBO:0012037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity (predicted)","termid":"PBO:0012037"}


id: PBO:0017888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1 (predicted)","termid":"PBO:0017888"}


id: PBO:0066808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 107","termid":"PBO:0066808"}


id: PBO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc8 (predicted)","termid":"PBO:0004704"}


id: PBO:0084752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix cochaperone; nucleotide release factor for Ssc1p in protein translocation and folding; also acts as cochaperone for Ssq1p in folding of Fe-S cluster proteins; acts as oxidative sensor to regulate mitochondrial Ssc1p; in presence of oxidative stress, dimeric Mge1p becomes a monomer and unable to regulate Ssc1p function; homolog of E. coli GrpE and human Mge1 (GRPEL1), which also responds to oxidative stress","termid":"PBO:0084752"}


id: GO:0060121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of vestibular hair cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"},{"relation_name":"part_of","term_name":"vestibular receptor cell morphogenesis","termid":"GO:0060116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell stereocilium organization","synonyms":[{"name":"vestibular hair cell stereocilium organization","type":"exact"},{"name":"vestibular receptor cell stereocilium organisation","type":"exact"},{"name":"vestibular receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060121"}


id: PBO:0087704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator","termid":"PBO:0087704"}


id: PBO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer","termid":"PBO:0034785"}


id: PBO:0040152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 1","termid":"PBO:0040152"}


id: PBO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_vegetative_growth","termid":"PBO:0031000"}


id: PBO:0062666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily H member 1","termid":"PBO:0062666"}


id: PBO:0069997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1292, pseudogene","termid":"PBO:0069997"}


id: GO:0090463
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92736],"is_not":false,"summary":null,"term":"GO:0090463"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of lysine within a cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular lysine homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular lysine homeostasis","type":"exact"},{"name":"lysine homeostasis","type":"exact"}],"termid":"GO:0090463","terms_by_termid":{"GO:0090463":null}}


id: FYPO:0002818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer microtubule bundles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"microtubule bundles present in decreased numbers","synonyms":[{"name":"decreased level of MT bundles","type":"exact"},{"name":"decreased microtubule bundling","type":"related"},{"name":"microtubule arrays present in decreased numbers","type":"related"},{"name":"microtubule bundles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002818"}


id: PBO:0062690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily AB member 1 pseudogene","termid":"PBO:0062690"}


id: PBO:0109295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX1 antisense RNA 1","termid":"PBO:0109295"}


id: GO:0009514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized form of peroxisome that contains the enzymes of the glyoxylate pathway. The glyoxysome is found in some plant cells, notably the cells of germinating seeds.","definition_xrefs":["ISBN:0140514031","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glyoxysome","secondary_identifiers":["Wikipedia:Glyoxysome"],"termid":"GO:0009514"}


id: PBO:0086654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to vacuole; not an essential gene; YNL058C has a paralog, PRM5, that arose from the whole genome duplication","termid":"PBO:0086654"}


id: GO:2000029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proanthocyanidin biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"proanthocyanidin biosynthetic process","termid":"GO:0010023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of proanthocyanidin biosynthetic process","synonyms":[{"name":"regulation of proanthocyanidin anabolism","type":"exact"},{"name":"regulation of proanthocyanidin biosynthesis","type":"exact"},{"name":"regulation of proanthocyanidin formation","type":"exact"},{"name":"regulation of proanthocyanidin synthesis","type":"exact"}],"termid":"GO:2000029"}


id: PBO:0045389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase like 10","termid":"PBO:0045389"}


id: PBO:0066545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 9","termid":"PBO:0066545"}


id: PBO:0081373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 212","termid":"PBO:0081373"}


id: GO:0033215
data:
  {"annotated_genes":["SJAG_04743","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88417,109362],"is_not":false,"summary":null,"term":"GO:0033215"}]},"cv_name":"biological_process","definition":"A process in which iron is solubilized by reduction from Fe3+ to Fe2+ via a cell surface reductase and subsequent transport of the iron across the membrane by iron uptake proteins.","definition_xrefs":["PMID:16963626","GOC:cjm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"reductive iron assimilation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron assimilation by reduction and transport","type":"exact"}],"termid":"GO:0033215","terms_by_termid":{"GO:0033215":null}}


id: FYPO:0004675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dimethyl sulfoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on dimethyl sulfoxide","synonyms":[{"name":"normal cell population growth in presence of dimethyl sulfoxide","type":"exact"},{"name":"normal cell population growth on DMSO","type":"exact"},{"name":"normal cell population growth on dimethyl sulfoxide","type":"exact"},{"name":"normal cellular response to dimethyl sulfoxide","type":"related"},{"name":"normal growth on dimethyl sulphoxide","type":"exact"},{"name":"normal vegetative cell population growth on dimethyl sulfoxide","type":"exact"}],"termid":"FYPO:0004675"}


id: PBO:0041633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 3","termid":"PBO:0041633"}


id: PR:P40996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein scd2/ral3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.07","synonyms":[{"name":"Spom972h-scd2","type":"exact"}],"termid":"PR:P40996"}


id: PATO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000977 absolute permeability value (obsolete PATO:0000977)","termid":"PATO:0000977"}


id: GO:0019262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylneuraminate metabolic process","termid":"GO:0006054"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"N-acetylneuraminate catabolic process","secondary_identifiers":["MetaCyc:P441-PWY"],"synonyms":[{"name":"N-acetylneuraminate breakdown","type":"exact"},{"name":"N-acetylneuraminate catabolism","type":"exact"},{"name":"N-acetylneuraminate degradation","type":"exact"}],"termid":"GO:0019262"}


id: GO:1900263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of DNA-directed DNA polymerase activity","termid":"GO:1900262"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"down regulation of DNA duplicase activity","type":"exact"},{"name":"down regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of DNA polymerase I","type":"narrow"},{"name":"down regulation of DNA polymerase II","type":"narrow"},{"name":"down regulation of DNA polymerase III","type":"narrow"},{"name":"down regulation of DNA polymerase V activity","type":"narrow"},{"name":"down regulation of DNA polymerase alpha","type":"narrow"},{"name":"down regulation of DNA polymerase beta","type":"narrow"},{"name":"down regulation of DNA polymerase gamma","type":"narrow"},{"name":"down regulation of DNA replicase activity","type":"exact"},{"name":"down regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down regulation of Klenow fragment","type":"narrow"},{"name":"down regulation of Taq DNA polymerase","type":"narrow"},{"name":"down regulation of Taq Pol I","type":"narrow"},{"name":"down regulation of Tca DNA polymerase","type":"narrow"},{"name":"down regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down regulation of duplicase","type":"broad"},{"name":"down regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down regulation of sequenase","type":"related"},{"name":"down regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of DNA duplicase activity","type":"exact"},{"name":"down-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of DNA polymerase I","type":"narrow"},{"name":"down-regulation of DNA polymerase II","type":"narrow"},{"name":"down-regulation of DNA polymerase III","type":"narrow"},{"name":"down-regulation of DNA polymerase V activity","type":"narrow"},{"name":"down-regulation of DNA polymerase alpha","type":"narrow"},{"name":"down-regulation of DNA polymerase beta","type":"narrow"},{"name":"down-regulation of DNA polymerase gamma","type":"narrow"},{"name":"down-regulation of DNA replicase activity","type":"exact"},{"name":"down-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"down-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"down-regulation of Klenow fragment","type":"narrow"},{"name":"down-regulation of Taq DNA polymerase","type":"narrow"},{"name":"down-regulation of Taq Pol I","type":"narrow"},{"name":"down-regulation of Tca DNA polymerase","type":"narrow"},{"name":"down-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"down-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"down-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"down-regulation of duplicase","type":"broad"},{"name":"down-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"down-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"down-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"down-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"down-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"down-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"down-regulation of sequenase","type":"related"},{"name":"down-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"down-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"down-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"downregulation of DNA duplicase activity","type":"exact"},{"name":"downregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of DNA polymerase I","type":"narrow"},{"name":"downregulation of DNA polymerase II","type":"narrow"},{"name":"downregulation of DNA polymerase III","type":"narrow"},{"name":"downregulation of DNA polymerase V activity","type":"narrow"},{"name":"downregulation of DNA polymerase alpha","type":"narrow"},{"name":"downregulation of DNA polymerase beta","type":"narrow"},{"name":"downregulation of DNA polymerase gamma","type":"narrow"},{"name":"downregulation of DNA replicase activity","type":"exact"},{"name":"downregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"downregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"downregulation of Klenow fragment","type":"narrow"},{"name":"downregulation of Taq DNA polymerase","type":"narrow"},{"name":"downregulation of Taq Pol I","type":"narrow"},{"name":"downregulation of Tca DNA polymerase","type":"narrow"},{"name":"downregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"downregulation of beta DNA polymerase activity","type":"narrow"},{"name":"downregulation of delta DNA polymerase activity","type":"narrow"},{"name":"downregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"downregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"downregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"downregulation of duplicase","type":"broad"},{"name":"downregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"downregulation of eta DNA polymerase activity","type":"narrow"},{"name":"downregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"downregulation of iota DNA polymerase activity","type":"narrow"},{"name":"downregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"downregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"downregulation of mu DNA polymerase activity","type":"narrow"},{"name":"downregulation of nu DNA polymerase activity","type":"narrow"},{"name":"downregulation of sequenase","type":"related"},{"name":"downregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"downregulation of theta DNA polymerase activity","type":"narrow"},{"name":"downregulation of zeta DNA polymerase activity","type":"narrow"},{"name":"inhibition of DNA duplicase activity","type":"exact"},{"name":"inhibition of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of DNA polymerase I","type":"narrow"},{"name":"inhibition of DNA polymerase II","type":"narrow"},{"name":"inhibition of DNA polymerase III","type":"narrow"},{"name":"inhibition of DNA polymerase V activity","type":"narrow"},{"name":"inhibition of DNA polymerase alpha","type":"narrow"},{"name":"inhibition of DNA polymerase beta","type":"narrow"},{"name":"inhibition of DNA polymerase gamma","type":"narrow"},{"name":"inhibition of DNA replicase activity","type":"exact"},{"name":"inhibition of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"inhibition of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of Klenow fragment","type":"narrow"},{"name":"inhibition of Taq DNA polymerase","type":"narrow"},{"name":"inhibition of Taq Pol I","type":"narrow"},{"name":"inhibition of Tca DNA polymerase","type":"narrow"},{"name":"inhibition of alpha DNA polymerase activity","type":"narrow"},{"name":"inhibition of beta DNA polymerase activity","type":"narrow"},{"name":"inhibition of delta DNA polymerase activity","type":"narrow"},{"name":"inhibition of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"inhibition of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic duplicase activity","type":"exact"},{"name":"inhibition of deoxyribonucleic polymerase I","type":"narrow"},{"name":"inhibition of duplicase","type":"broad"},{"name":"inhibition of epsilon DNA polymerase activity","type":"narrow"},{"name":"inhibition of eta DNA polymerase activity","type":"narrow"},{"name":"inhibition of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"inhibition of iota DNA polymerase activity","type":"narrow"},{"name":"inhibition of kappa DNA polymerase activity","type":"narrow"},{"name":"inhibition of lambda DNA polymerase activity","type":"narrow"},{"name":"inhibition of mu DNA polymerase activity","type":"narrow"},{"name":"inhibition of nu DNA polymerase activity","type":"narrow"},{"name":"inhibition of sequenase","type":"related"},{"name":"inhibition of sigma DNA polymerase activity","type":"narrow"},{"name":"inhibition of theta DNA polymerase activity","type":"narrow"},{"name":"inhibition of zeta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of DNA duplicase activity","type":"exact"},{"name":"negative regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of DNA polymerase I","type":"narrow"},{"name":"negative regulation of DNA polymerase II","type":"narrow"},{"name":"negative regulation of DNA polymerase III","type":"narrow"},{"name":"negative regulation of DNA polymerase V activity","type":"narrow"},{"name":"negative regulation of DNA polymerase alpha","type":"narrow"},{"name":"negative regulation of DNA polymerase beta","type":"narrow"},{"name":"negative regulation of DNA polymerase gamma","type":"narrow"},{"name":"negative regulation of DNA replicase activity","type":"exact"},{"name":"negative regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"negative regulation of Klenow fragment","type":"narrow"},{"name":"negative regulation of Taq DNA polymerase","type":"narrow"},{"name":"negative regulation of Taq Pol I","type":"narrow"},{"name":"negative regulation of Tca DNA polymerase","type":"narrow"},{"name":"negative regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"negative regulation of beta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of delta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"negative regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"negative regulation of duplicase","type":"broad"},{"name":"negative regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"negative regulation of eta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"negative regulation of iota DNA polymerase activity","type":"narrow"},{"name":"negative regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"negative regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"negative regulation of mu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of nu DNA polymerase activity","type":"narrow"},{"name":"negative regulation of sequenase","type":"related"},{"name":"negative regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"negative regulation of theta DNA polymerase activity","type":"narrow"},{"name":"negative regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900263"}


id: PBO:0060643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 2","termid":"PBO:0060643"}


id: PBO:0029872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation","termid":"PBO:0029872"}


id: GO:0097473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["CL:0000604","PMID:17202487","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell apoptotic process","synonyms":[{"name":"rod photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097473"}


id: PBO:0059854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 7","termid":"PBO:0059854"}


id: PBO:0014589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitosis Inhibitory Kinase","termid":"PBO:0014589"}


id: PR:O13834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ptr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.04","synonyms":[{"name":"Spom972h-ptr1","type":"exact"},{"name":"poly(A)+ RNA transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13834"}


id: GO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a specific DNA sequence and recruiting RNA polymerase to the DNA in order to form the preinitiation complex (PIC).","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting (obsolete GO:0001011)","synonyms":[{"name":"sequence-specific DNA binding RNA polymerase recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001011"}


id: PBO:0089430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human thyroid receptor interacting protein homolog, transcription coactivator","termid":"PBO:0089430"}


id: GO:1900472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8614637","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900472)","synonyms":[{"name":"positive regulation of phosphatidylcholine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900472"}


id: _global:precedes
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","secondary_identifiers":["BFO:0000063"],"termid":"_global:precedes"}


id: MOD:01326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-tyrosine.","definition_xrefs":["PubMed:11510821","PubMed:12422359","PubMed:12716131","Unimod:184#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-tyrosine","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:01326"}


id: PBO:0057885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3189","termid":"PBO:0057885"}


id: PBO:0048833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 1 (putative)","termid":"PBO:0048833"}


id: GO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"},{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"corticotropin receptor activity","synonyms":[{"name":"ACTH receptor activity","type":"exact"},{"name":"adrenocorticotropic hormone receptor activity","type":"exact"},{"name":"adrenocorticotropin receptor activity","type":"exact"}],"termid":"GO:0004978"}


id: GO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kojibiose + phosphate = beta-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["EC:2.4.1.230","RHEA:11176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kojibiose phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R07264","MetaCyc:2.4.1.230-RXN"],"synonyms":[{"name":"2-alpha-D-glucosyl-D-glucose:phosphate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033831"}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: PBO:0079590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 2","termid":"PBO:0079590"}


id: GO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont arbuscule formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"regulation of feeding behavior","termid":"GO:0060259"},{"relation_name":"regulates","term_name":"formation of arbuscule for nutrient acquisition","termid":"GO:0075328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of arbuscule formation for nutrient acquisition from host","termid":"GO:0075329"}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: GO:0075043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which melanin is produced in the appressorium of the symbiont. Melanization of the appressorium increases turgor pressure in the appressorium.","definition_xrefs":["Wikipedia:Appressorium","GOC:pamgo_curators","PMID:28165657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"},{"relation_name":"part_of","term_name":"appressorium maturation","termid":"GO:0075035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanization of appressorium wall","synonyms":[{"name":"maintenance of turgor in appressorium by melanization","type":"related"},{"name":"melanization of appressorium to maintain turgor pressure","type":"exact"}],"termid":"GO:0075043"}


id: PBO:0048335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 46","termid":"PBO:0048335"}


id: GO:0097245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavanol.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"flavanol binding","synonyms":[{"name":"flavan-3-ol binding","type":"narrow"}],"termid":"GO:0097245"}


id: PBO:0083875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein that regulates pheromone-dependent morphogenesis; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain","termid":"PBO:0083875"}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: GO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045891)","synonyms":[{"name":"negative regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045891"}


id: GO:0019761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"glycosinolate biosynthetic process","termid":"GO:0019758"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"glucosinolate biosynthetic process","synonyms":[{"name":"glucosinolate anabolism","type":"exact"},{"name":"glucosinolate biosynthesis","type":"exact"},{"name":"glucosinolate formation","type":"exact"},{"name":"glucosinolate synthesis","type":"exact"}],"termid":"GO:0019761"}


id: PBO:0088477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagA/B GTPase Gtr1","termid":"PBO:0088477"}


id: SO:0002238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 5S_rRNA, which is a portion of the large subunit of the ribosome in both eukaryotes and prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_5S_gene","synonyms":[{"name":"5S rRNA gene","type":"exact"},{"name":"5S_rRNA_gene","type":"exact"}],"termid":"SO:0002238"}


id: PR:Q10077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component snt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.12c","synonyms":[{"name":"Lid2C component snt2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snt2","type":"exact"}],"termid":"PR:Q10077"}


id: PBO:0057199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 371b","termid":"PBO:0057199"}


id: SO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome where regulatory events occur, including epigenetic modifications. These epigenetic modifications can include nucleosome modifications and post-replicational DNA modifications.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin_regulatory_region","synonyms":[{"name":"chromatin regulatory region","type":"exact"}],"termid":"SO:0002306"}


id: PBO:0061573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 alpha (pseudogene)","termid":"PBO:0061573"}


id: PBO:0088979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Pfa3","termid":"PBO:0088979"}


id: PR:O74972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.11 gene.","definition_xrefs":["UniProtKB:O74972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fyv4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.11","synonyms":[{"name":"Spom972h-SPBC4B4.11","type":"exact"}],"termid":"PR:O74972"}


id: GO:0035410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5alpha-dihydrotestosterone + NAD+ = 5alpha-androstane-3,17-dione + NADH.","definition_xrefs":["GOC:ecd","PMID:4152755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydrotestosterone 17-beta-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.51"],"termid":"GO:0035410"}


id: GO:0050863
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050870"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of T lymphocyte activation","type":"exact"},{"name":"regulation of T-cell activation","type":"exact"},{"name":"regulation of T-lymphocyte activation","type":"exact"}],"termid":"GO:0050863","terms_by_termid":{"GO:0050870":null}}


id: SO:0000930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of guide RNA.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"guide_RNA","termid":"SO:0000602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guide_RNA_region","synonyms":[{"name":"guide RNA region","type":"exact"}],"termid":"SO:0000930"}


id: GO:0032169
data:
  {"annotated_genes":["SJAG_03688","SJAG_01769","SJAG_00663","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90566,96311,102382,112656],"is_not":false,"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the site of cytokinesis in a prospore; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:mah","GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"prospore septin ring","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032169","terms_by_termid":{"GO:0032169":null}}


id: GO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["GOC:mah","PMID:10970777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate metabolic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate metabolism","type":"exact"}],"termid":"GO:0015956"}


id: PBO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc13","termid":"PBO:0003792"}


id: PBO:0068083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 389","termid":"PBO:0068083"}


id: GO:0006209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"cytosine catabolic process","synonyms":[{"name":"cytosine breakdown","type":"exact"},{"name":"cytosine catabolism","type":"exact"},{"name":"cytosine degradation","type":"exact"}],"termid":"GO:0006209"}


id: GO:0019253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fixation of carbon dioxide (CO2) as glucose in the chloroplasts of C3 plants; uses ATP and NADPH formed in the light reactions of photosynthesis; carbon dioxide reacts with ribulose 1,5-bisphosphate (catalyzed by the function of ribulose-bisphosphate carboxylase) to yield two molecules of 3-phosphoglycerate; these are then phosphorylated by ATP to 1,3-bisphosphateglyceraldehyde which, in turn, is then reduced by NADPH to glyceraldehyde 3-phosphate. The glyceraldehyde 3-phosphate is converted to fructose 5-phosphate and ribulose 5-phosphate by aldolase and other enzymes; the ribulose 5-phosphate is phosphorylated by ATP to ribulose 1,5-bisphosphate.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"},{"relation_name":"part_of","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"reductive pentose-phosphate cycle","secondary_identifiers":["MetaCyc:CALVIN-PWY"],"synonyms":[{"name":"C3 photosynthesis","type":"narrow"},{"name":"Calvin cycle","type":"narrow"}],"termid":"GO:0019253"}


id: PBO:0053160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor class A domain containing 2","termid":"PBO:0053160"}


id: PBO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase O (putative)","termid":"PBO:0039637"}


id: PBO:0013750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein Atg10","termid":"PBO:0013750"}


id: PBO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 23","termid":"PBO:0070524"}


id: FYPO:0001069
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116205,116204,116203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more mitotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased duration of mitotic cell cycle phase during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle phase","type":"exact"}],"termid":"FYPO:0001069","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: PBO:0029934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029934"}


id: PBO:0076860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 10","termid":"PBO:0076860"}


id: GO:0060643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell of the mammary placode becomes a cell of the mammary gland bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"},{"relation_name":"part_of","term_name":"mammary gland bud formation","termid":"GO:0060615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}


