# terms

id: PBO:0086924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyrimidine nucleotidase; responsible for production of nicotinamide riboside and nicotinic acid riboside; overexpression suppresses the 6-AU sensitivity of transcription elongation factor S-II, as well as resistance to other pyrimidine derivatives; SDT1 has a paralog, PHM8, that arose from the whole genome duplication","termid":"PBO:0086924"}


id: GO:1990852
data:
  {"annotated_genes":["SJAG_05266","SJAG_01371","SJAG_03437","SJAG_01546","SJAG_05319","SJAG_00918","SJAG_01211","SJAG_01775","SJAG_01224","SJAG_05220","SJAG_02731"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113630,85624,96732,92902,94798,86891,85002,105326,106355,103906,110729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein along a microtubule to the spindle pole body, mediated by motor proteins.","definition_xrefs":["PMID:25987607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to spindle pole body","termid":"GO:0071989"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transport along microtubule to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990852","terms_by_termid":{"GO:1990976":null}}


id: PBO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRLF3 pseudogene 1","termid":"PBO:0043911"}


id: GO:0004510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O.","definition_xrefs":["EC:1.14.16.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tryptophan 5-monooxygenase activity","secondary_identifiers":["Reactome:R-HSA-209828","MetaCyc:TRYPTOPHAN-5-MONOOXYGENASE-RXN","RHEA:16709"],"synonyms":[{"name":"L-tryptophan hydroxylase activity","type":"exact"},{"name":"L-tryptophan,tetrahydrobiopterin:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"indoleacetic acid-5-hydroxylase activity","type":"related"},{"name":"tryptophan 5-hydroxylase activity","type":"related"},{"name":"tryptophan hydroxylase activity","type":"related"}],"termid":"GO:0004510"}


id: PBO:0081170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9","termid":"PBO:0081170"}


id: PBO:0081982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5D pseudogene","termid":"PBO:0081982"}


id: GO:0008954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan synthetase activity (obsolete GO:0008954)","synonyms":[{"name":"peptidoglycan synthetase activity","type":"exact"}],"termid":"GO:0008954"}


id: PBO:0071326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 2","termid":"PBO:0071326"}


id: PATO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000265 relative visual_ability (obsolete PATO:0000265)","termid":"PATO:0000265"}


id: PBO:0089061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein, possibly be part of SJAG_01450","termid":"PBO:0089061"}


id: FYPO:0006364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which meiotic spindle microtubules become disconnected from the spindle pole body during the first meiotic nuclear division.","definition_xrefs":["PMID:24954111","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"},{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology during meiosis I","termid":"FYPO:0006022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000120","FYPO:0000121","FYPO:0000631","FYPO:0001985","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"spindle microtubules detached from spindle pole body during meiosis I","synonyms":[{"name":"meiotic spindle microtubules detached from spindle pole body during meiosis I","type":"exact"},{"name":"non-polar spindle during meiosis I","type":"related"},{"name":"spindle microtubules detached from SPB during meiosis I","type":"exact"},{"name":"spindle microtubules detached from spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"spindle pole body detached from spindle microtubules during meiosis I","type":"exact"}],"termid":"FYPO:0006364"}


id: GO:0050809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to diazepam, one of the most widely used benzodiazepine drugs. It is used as an anti-anxiety-hypnotic agent and has the proprietary name Valium.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"diazepam binding","synonyms":[{"name":"Valium binding","type":"exact"},{"name":"diazepam binding inhibitor activity","type":"related"}],"termid":"GO:0050809"}


id: PBO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3C, pseudogene","termid":"PBO:0047740"}


id: GO:0050128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-feruloylglycine + H2O = ferulate + glycine.","definition_xrefs":["RHEA:10484","EC:3.5.1.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-feruloylglycine deacylase activity","secondary_identifiers":["MetaCyc:N-FERULOYLGLYCINE-DEACYLASE-RXN","KEGG_REACTION:R03579"],"synonyms":[{"name":"N-feruloylglycine amidohydrolase activity","type":"related"},{"name":"N-feruloylglycine hydrolase activity","type":"related"}],"termid":"GO:0050128"}


id: PBO:0066001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein catalytic subunit alpha 1","termid":"PBO:0066001"}


id: PBO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2","termid":"PBO:0090487"}


id: GO:0102995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: columbianetin + NADPH + O2 + H+ = angelicin + acetone + NADP + 2 H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"angelicin synthase activity","secondary_identifiers":["MetaCyc:RXN-9689","RHEA:27481"],"termid":"GO:0102995"}


id: GO:0016520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with growth hormone-releasing hormone to initiate a change in cell activity.","definition_xrefs":["PMID:12529933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"growth hormone-releasing hormone receptor activity","termid":"GO:0016520"}


id: GO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class IX myosin heavy chain and associated light chains. Myosin IX is monomeric with a motor domain containing an N-terminal extension and an insert in the actin binding interface, followed by four to six IQ motifs and a tail region that contains a zinc binding motif and a domain with homology to GTPase activating proteins (GAPs) of the Rho family of G-proteins.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin IX complex","termid":"GO:0031479"}


id: PR:O74487
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1906.04","synonyms":[{"name":"Spom972h-wtf20","type":"exact"}],"termid":"PR:O74487"}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: GO:0102545
data:
  {"annotated_genes":["SJAG_03204","SJAG_02093","SJAG_02091","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86014,87823,111401,113691],"is_not":false,"summary":null,"term":"GO:0102545"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + a phosphatidylcholine = sn-glycero-3-phosphocholine + 2 H+ + 2 a carboxylate.","definition_xrefs":["GOC:pz","EC:3.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"phosphatidyl phospholipase B activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14899"],"termid":"GO:0102545","terms_by_termid":{"GO:0102545":null}}


id: PBO:0035998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035998"}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: PBO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 6, pseudogene","termid":"PBO:0050820"}


id: GO:0042412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["ISBN:0198600461","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"},{"relation_name":"is_a","term_name":"alkanesulfonate biosynthetic process","termid":"GO:0046305"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"taurine biosynthetic process","synonyms":[{"name":"taurine anabolism","type":"exact"},{"name":"taurine biosynthesis","type":"exact"},{"name":"taurine formation","type":"exact"},{"name":"taurine synthesis","type":"exact"}],"termid":"GO:0042412"}


id: PBO:0029940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dispersed_actin_cortical_patch_localization_during_mitotic_interphase","termid":"PBO:0029940"}


id: GO:0036066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring a fucosyl group to a serine or threonine residues in a protein acceptor molecule, to form an O-linked protein-sugar linkage.","definition_xrefs":["PMID:19948734","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"fucosylation","termid":"GO:0036065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked fucosylation","termid":"GO:0036066"}


id: PBO:0031723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_recombination","termid":"PBO:0031723"}


id: PBO:0054126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1492","termid":"PBO:0054126"}


id: PBO:0087956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane nucleoporin; involved in nuclear pore complex (NPC) distribution, assembly or stabilization; highly conserved across species, orthologous to human TMEM33 and paralogous to Per33p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087956"}


id: PBO:0040674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31 pseudogene 2","termid":"PBO:0040674"}


id: GO:0015578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannose from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mannose transmembrane transporter activity","secondary_identifiers":["GO:0015589"],"synonyms":[{"name":"mannose permease activity","type":"exact"}],"termid":"GO:0015578"}


id: GO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hair follicle cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:rph","PMID:16086254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle cell proliferation","termid":"GO:0071335"}


id: PBO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 2","termid":"PBO:0046716"}


id: PBO:0085667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0085667"}


id: GO:0032336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activin secretion","termid":"GO:0032335"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"negatively_regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of activin secretion","synonyms":[{"name":"down regulation of activin secretion","type":"exact"},{"name":"down-regulation of activin secretion","type":"exact"},{"name":"downregulation of activin secretion","type":"exact"},{"name":"inhibition of activin secretion","type":"narrow"}],"termid":"GO:0032336"}


id: GO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an amacrine cell, an interneuron generated in the inner nuclear layer (INL) of the vertebrate retina. Amacrine cells integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer. Amacrine cells lack large axons.","definition_xrefs":["CL:0000561","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amacrine cell differentiation","synonyms":[{"name":"amacrine neuron differentiation","type":"exact"}],"termid":"GO:0035881"}


id: PBO:0052857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-17, pseudogene","termid":"PBO:0052857"}


id: GO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + dTTP = diphosphate + dTDP-D-galactose.","definition_xrefs":["EC:2.7.7.32","RHEA:17165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"galactose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.32-RXN","KEGG_REACTION:R02329"],"synonyms":[{"name":"dTDP galactose pyrophosphorylase activity","type":"related"},{"name":"dTDP-galactose diphosphorylase activity","type":"related"},{"name":"dTDP-galactose pyrophosphorylase activity","type":"related"},{"name":"dTTP:alpha-D-galactose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate thymidylyl transferase activity","type":"related"},{"name":"thymidine diphosphogalactose pyrophosphorylase activity","type":"related"},{"name":"thymidine triphosphate:alpha-D-galactose 1-phosphate thymidylyltransferase activity","type":"related"}],"termid":"GO:0047342"}


id: FYPO:0000015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"branched vegetative cell","synonyms":[{"name":"branched cell","type":"exact"},{"name":"branched cell during vegetative growth","type":"exact"},{"name":"branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, branched","type":"exact"}],"termid":"FYPO:0000015"}


id: PR:Q10436
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.02c gene.","definition_xrefs":["UniProtKB:Q10436","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.02c","synonyms":[{"name":"Spom972h-SPAC12B10.02c","type":"exact"}],"termid":"PR:Q10436"}


id: PBO:0072353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 39","termid":"PBO:0072353"}


id: PBO:0086923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyridoxine (pyridoxamine) phosphate oxidase; has homologs in E. coli and Myxococcus xanthus; transcription is under the general control of nitrogen metabolism","termid":"PBO:0086923"}


id: PBO:0060195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 16, cell surface associated","termid":"PBO:0060195"}


id: PBO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex Yth1","termid":"PBO:0000415"}


id: PBO:0041295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2CD2 like","termid":"PBO:0041295"}


id: PBO:0052263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 3A","termid":"PBO:0052263"}


id: SO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that contains a CDS but has no stop codon before the polyA site is reached.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSD_transcript","synonyms":[{"name":"non_stop_decay_transcript","type":"exact"}],"termid":"SO:0002130"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: FYPO:0001463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases abnormally, or does not change, immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001463"}


id: PBO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_circular_minichromosome_loss_during_vegetative_growth","termid":"PBO:0033745"}


id: GO:0008483
data:
  {"annotated_genes":["SJAG_02791","SJAG_03434","SJAG_02408","SJAG_04988","SJAG_00673","SJAG_03856","SJAG_04678","SJAG_04145","SJAG_04728","SJAG_00495","SJAG_01019","SJAG_03055","SJAG_03312","SJAG_03961","SJAG_03641","SJAG_02901","SJAG_00714","SJAG_04149","SJAG_00691","SJAG_03306"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58117,67386,91874,92518,109629],"is_not":false,"summary":null,"term":"GO:0008483"},{"annotations":[95577,72297,75750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047536"},{"annotations":[110301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046820"},{"annotations":[87634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034386"},{"annotations":[75351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004015"},{"annotations":[107738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008453"},{"annotations":[77030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004360"},{"annotations":[107739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047958"},{"annotations":[98563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004400"},{"annotations":[73165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016212"},{"annotations":[78120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004021"},{"annotations":[71063,76551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004069"},{"annotations":[106911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052656"},{"annotations":[106912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052654"},{"annotations":[106913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050048"},{"annotations":[94509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080130"},{"annotations":[108348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004838"},{"annotations":[106914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052655"},{"annotations":[115102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003992"},{"annotations":[78243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004648"},{"annotations":[77247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004587"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00714":null,"SJAG_01019":null,"SJAG_02408":null,"SJAG_02791":null,"SJAG_02901":null,"SJAG_03055":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03856":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04678":null,"SJAG_04728":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"transaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.6.1.-","Reactome:R-HSA-1237102"],"synonyms":[{"name":"aminotransferase activity","type":"exact"}],"termid":"GO:0008483","terms_by_termid":{"GO:0003992":null,"GO:0004015":null,"GO:0004021":null,"GO:0004069":null,"GO:0004360":null,"GO:0004400":null,"GO:0004587":null,"GO:0004648":null,"GO:0004838":null,"GO:0008453":null,"GO:0008483":null,"GO:0016212":null,"GO:0034386":null,"GO:0046820":null,"GO:0047536":null,"GO:0047958":null,"GO:0050048":null,"GO:0052654":null,"GO:0052655":null,"GO:0052656":null,"GO:0080130":null}}


id: GO:0097629
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90684],"is_not":false,"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","PMID:18725538","PMID:24591649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"omegasome membrane","termid":"GO:1903349"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of omegasome membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to omegasome membrane","type":"exact"},{"name":"omegasome peripheral membrane","type":"related"}],"termid":"GO:0097629","terms_by_termid":{"GO:0097629":null}}


id: PBO:0068528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 129, pseudogene","termid":"PBO:0068528"}


id: PBO:0080719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 1","termid":"PBO:0080719"}


id: GO:0015575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannitol from one side of a membrane to the other. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mannitol transmembrane transporter activity","secondary_identifiers":["GO:0015586"],"synonyms":[{"name":"mannitol permease activity","type":"exact"}],"termid":"GO:0015575"}


id: GO:0021584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GO_REF:0000021","ISBN:0838580343","GOC:dph","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons formation","termid":"GO:0021584"}


id: PBO:0061731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 4 pseudogene","termid":"PBO:0061731"}


id: PBO:0086265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p","termid":"PBO:0086265"}


id: PBO:0074859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45C","termid":"PBO:0074859"}


id: PBO:0018291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit (predicted)","termid":"PBO:0018291"}


id: PBO:0044043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosome and spindle pole associated protein 1","termid":"PBO:0044043"}


id: GO:0043064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a flagellum, a long thin projection from a cell, used in movement.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellum organization (obsolete GO:0043064)","synonyms":[{"name":"flagellum organisation","type":"exact"},{"name":"flagellum organization","type":"exact"},{"name":"flagellum organization and biogenesis","type":"related"}],"termid":"GO:0043064"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity","secondary_identifiers":["RHEA:56560","MetaCyc:RXN-7667"],"termid":"GO:0102751"}


id: PBO:0003139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/zinc ion transporter (predicted)","termid":"PBO:0003139"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: PBO:0086253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that plays a role in modification of tRNA wobble nucleosides; protein plays role in tRNA wobble nucleoside modification with Elongator complex; involved in sensitivity to G1 arrest induced by zymocin; interacts with chromatin throughout the genome; also interacts with Cdc19p","termid":"PBO:0086253"}


id: PBO:0064542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 3, pseudogene","termid":"PBO:0064542"}


id: PR:Q9P3W2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1803 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3W2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVP1-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.06","synonyms":[{"name":"Spom972h-atg1803","type":"exact"}],"termid":"PR:Q9P3W2"}


id: PBO:0056940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-1","termid":"PBO:0056940"}


id: PBO:0067048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 68, pseudogene","termid":"PBO:0067048"}


id: PBO:0110420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFBRAP1 antisense RNA 1","termid":"PBO:0110420"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71280,73169],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["PMID:8621375","EC:2.5.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-2530501","Reactome:R-HSA-9647978","RHEA:13345","GO:0018223","MetaCyc:RXN-17573"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: PBO:0072829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SANT and BTB domain regulator of CSR","termid":"PBO:0072829"}


id: PBO:0050134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 44","termid":"PBO:0050134"}


id: PR:C6Y4C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo13 gene.","definition_xrefs":["UniProtKB:C6Y4C9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.12","synonyms":[{"name":"Spom972h-spo13","type":"exact"}],"termid":"PR:C6Y4C9"}


id: PBO:0085666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleolar integrity and processing of pre-rRNA; has a role in processing rRNA for the 60S ribosome subunit; transcript is induced in response to cytotoxic stress but not genotoxic stress; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085666"}


id: GO:0075203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont penetration hypha formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of penetration hypha formation","termid":"GO:0075202"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"penetration hypha formation","termid":"GO:0075201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penetration hypha formation","synonyms":[{"name":"positive regulation of symbiont penetration hypha formation for entry into host","type":"exact"}],"termid":"GO:0075203"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: PR:Q9HDV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug180 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steryl acetyl hydrolase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.02","synonyms":[{"name":"Spom972h-mug180","type":"exact"},{"name":"meiotically up-regulated gene 180 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV1"}


id: PBO:0029769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0029769"}


id: SO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a nucleotide polymer that has no terminal nucleotide residues.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topology_attribute","termid":"SO:0000986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular","synonyms":[{"name":"zero-ended","type":"related"}],"termid":"SO:0000988"}


id: PR:P87153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit eta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03631","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit eta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.12c","secondary_identifiers":["UniProtKB:P87153"],"synonyms":[{"name":"CCT-eta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT7","type":"exact"},{"name":"TCP-1-eta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87153"}


id: GO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052222)","synonyms":[{"name":"negative aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052222"}


id: PBO:0070926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 34","termid":"PBO:0070926"}


id: PBO:0078883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 6","termid":"PBO:0078883"}


id: GO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which renal water excretion is decreased.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of urine volume","termid":"GO:0035811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water retention","synonyms":[{"name":"negative regulation of renal water excretion","type":"exact"}],"termid":"GO:0003092"}


id: PBO:0068171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 478","termid":"PBO:0068171"}


id: GO:0042455
data:
  {"annotated_genes":["SJAG_00044","SJAG_06634","SJAG_01859","SJAG_03881","SJAG_03096","SJAG_00134","SJAG_01070","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[113550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[85654,72912,89580,89806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[72989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside anabolism","type":"exact"},{"name":"ribonucleoside biosynthesis","type":"exact"},{"name":"ribonucleoside formation","type":"exact"},{"name":"ribonucleoside synthesis","type":"exact"}],"termid":"GO:0042455","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null,"GO:0046132":null}}


id: PBO:0051920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta 3 binding protein","termid":"PBO:0051920"}


id: FYPO:0005211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during anaphase","type":"exact"}],"termid":"FYPO:0005211"}


id: PBO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor I","termid":"PBO:0042902"}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88404,103664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: PBO:0058295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4669","termid":"PBO:0058295"}


id: PBO:0080098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP3 small subunit processome component","termid":"PBO:0080098"}


id: PBO:0082882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyanamide hydratase that detoxifies cyanamide; member of the HD domain metalloprotein superfamily; expression is induced over 100-fold by cyanamide and by SN2-type DNA alkylating agents such as MMS and DMA; induction decreased in rad6 and rad18 mutants; gene and protein are identical to DDI3 and Ddi3p","termid":"PBO:0082882"}


id: PBO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 1","termid":"PBO:0071138"}


id: PBO:0089640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox14","termid":"PBO:0089640"}


id: PBO:0069836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1122, pseudogene","termid":"PBO:0069836"}


id: PBO:0065232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13","termid":"PBO:0065232"}


id: PBO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 17 (pseudogene)","termid":"PBO:0045606"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: GO:0048629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process of establishing the non-random spatial arrangement of trichomes on the surface and margin of a leaf. Process involves signaling between adjacent epidermal cells that results in differentiation of some epidermal cells into trichomes.","definition_xrefs":["GOC:tb","GOC:sm","PMID:10368181","GOC:jid","ISBN:0865427429","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trichome patterning","synonyms":[{"name":"trichome distribution","type":"broad"},{"name":"trichome pattern biosynthesis","type":"exact"},{"name":"trichome pattern formation","type":"exact"},{"name":"trichome pattern specification","type":"related"},{"name":"trichome spacing","type":"exact"}],"termid":"GO:0048629"}


id: PBO:0069879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1167, pseudogene","termid":"PBO:0069879"}


id: PBO:0063956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2","termid":"PBO:0063956"}


id: PBO:0042661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEACAM16, CEACAM19 and PVR antisense RNA 1","termid":"PBO:0042661"}


id: GO:0090539
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103584],"is_not":false,"summary":null,"term":"GO:0090539"}]},"cv_name":"biological_process","definition":"The directed movement of a peptide pheromone across a membrane and out of a cell.","definition_xrefs":["GOC:tb","GOC:al","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone export","termid":"GO:0000770"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"peptide pheromone export by transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide pheromone export by membrane transport","type":"exact"}],"termid":"GO:0090539","terms_by_termid":{"GO:0090539":null}}


id: PBO:0068837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 75, pseudogene","termid":"PBO:0068837"}


id: GO:0102099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,9-dihydro-1H-purine-2,6,8(3H)-trione + NADH + H+ + O2 = 5-hydroxyisouric acid + NAD + H2O.","definition_xrefs":["EC:1.14.13.113","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"FAD-dependent urate hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11186","RHEA:27329"],"termid":"GO:0102099"}


id: PBO:0054315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1707","termid":"PBO:0054315"}


id: FYPO:0000063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["GO:0006310","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abnormal DNA recombination","synonyms":[{"name":"abnormal recombination","type":"exact"},{"name":"recombination defects","type":"exact"}],"termid":"FYPO:0000063"}


id: FYPO:0003607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle","termid":"FYPO:0000120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0000120","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spindle morphology","synonyms":[{"name":"spindle morphology: abnormal","type":"related"}],"termid":"FYPO:0003607"}


id: GO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone + phosphoenolpyruvate = glycerone phosphate + pyruvate.","definition_xrefs":["RHEA:18381","EC:2.7.1.121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phosphoenolpyruvate-glycerone phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.121-RXN","KEGG_REACTION:R01012"],"synonyms":[{"name":"phosphoenolpyruvate:glycerone phosphotransferase activity","type":"related"}],"termid":"GO:0047324"}


id: PBO:0087278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3-domain protein located in the bud neck and cytokinetic actin ring; relocalizes from bud neck to nucleus upon DNA replication stress; activates the chitin synthase activity of Chs2p during cytokinesis; suppressor of growth and cytokinesis defects of chs2 phospho-mutants","termid":"PBO:0087278"}


id: MOD:00388
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively attaches an L-alanine residue to murein peptidoglycan by a pentaglycine linker peptide.","definition_xrefs":["PubMed:8163519","RESID:AA0383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"peptidoglycanated residue","termid":"MOD:01159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanyl-pentaglycyl-murein peptidoglycan","synonyms":[{"name":"(2R,6S)-2-(N-mureinyl-(R)-alanyl-(S)-isoglutamyl)amino-6-(alanyl-pentaglycyl)amino-pimeloyl-(S)-alanyl-(S)-alanine","type":"exact"},{"name":"L-alanyl-pentaglycyl-murein peptidoglycan","type":"exact"},{"name":"MOD_RES Pentaglycyl murein peptidoglycan amidated alanine","type":"exact"}],"termid":"MOD:00388"}


id: FYPO:0003074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to pericentric heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromeric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localisation to pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear centromeric heterochromatin","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic cell cycle during mitotic cell cycle during mitotic cell cycle","type":"related"},{"name":"protein localization to centromeric heterochromatin abolished during vegetative growth","type":"exact"},{"name":"protein localization to pericentric heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003074"}


id: GO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-tryptophan, to form peptidyl-L-6'-bromotryptophan.","definition_xrefs":["RESID:AA0179"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan bromination (obsolete GO:0018080)","termid":"GO:0018080"}


id: GO:0051899
data:
  {"annotated_genes":["SJAG_03002"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112485],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003254"}]},"cv_name":"biological_process","definition":"The process in which membrane potential decreases with respect to its steady-state potential, usually from negative potential to a more positive potential. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative steady-state resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:dh","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051899","terms_by_termid":{"GO:0003254":null}}


id: PBO:0055795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 4","termid":"PBO:0055795"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: GO:0004949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cannabinoid to initiate a change in cell activity. Cannabinoids are a class of diverse chemical compounds that include the endocannabinoids and the phytocannabinoids.","definition_xrefs":["IUPHAR_GPCR:1279","Wikipedia:Cannabinoid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cannabinoid receptor activity","synonyms":[{"name":"cannaboid receptor","type":"exact"},{"name":"endocannabinoid receptor activity","type":"narrow"}],"termid":"GO:0004949"}


id: PBO:0060956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor beta","termid":"PBO:0060956"}


id: GO:0007212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["PMID:21711983","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"dopamine receptor signaling pathway","synonyms":[{"name":"dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0007212"}


id: GO:0046961
data:
  {"annotated_genes":["SJAG_00516","SJAG_04955","SJAG_03406","SJAG_05294","SJAG_00136","SJAG_01471","SJAG_02023","SJAG_01913","SJAG_01817","SJAG_00212","SJAG_01397","SJAG_02782","SJAG_04015","SJAG_01447","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71139,77343,78138,85728,86059,87996,88883,91752,92741,96139,96217,98940,100231,106333,115446],"is_not":false,"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out), by a rotational mechanism.","definition_xrefs":["RHEA:57721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","termid":"GO:0044769"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02598":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"proton-transporting ATPase activity, rotational mechanism","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP phosphohydrolase (H+-transporting) activity","type":"narrow"},{"name":"ATP synthase activity","type":"narrow"},{"name":"F(0)F(1)-ATPase activity","type":"narrow"},{"name":"F(1)-ATPase activity","type":"narrow"},{"name":"F(o)F(1)-ATPase activity","type":"narrow"},{"name":"F0F1-ATPase","type":"narrow"},{"name":"F1-ATPase","type":"narrow"},{"name":"FoF1-ATPase","type":"narrow"},{"name":"H+-transporting ATP synthase activity","type":"narrow"},{"name":"H+-transporting ATPase activity","type":"narrow"},{"name":"chloroplast ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating A-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"hydrogen ion translocating V-type ATPase activity","type":"narrow"},{"name":"hydrogen ion transporting ATPase activity, rotational mechanism","type":"exact"},{"name":"hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"mitochondrial ATPase activity","type":"narrow"}],"termid":"GO:0046961","terms_by_termid":{"GO:0046961":null}}


id: PBO:0064580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B2","termid":"PBO:0064580"}


id: GO:0030593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil chemotaxis","termid":"GO:0030593"}


id: PBO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_colony_morphology","termid":"PBO:0030294"}


id: PBO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C13","termid":"PBO:0050513"}


id: RO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in breakdown of c if and only if the execution of p leads to c no longer being present at the end of p","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_breakdown_of","termid":"RO:0002586"}


id: GO:1902235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:20160352","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced apoptosis","type":"exact"},{"name":"regulation of apoptosis in response to ER stress","type":"exact"},{"name":"regulation of apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902235"}


id: PBO:0072049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 19","termid":"PBO:0072049"}


id: GO:1990851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing a secreted Wnt protein associated with its receptor, Frizzled (Fz), and co-receptor low density lipoprotein receptor-related protein 5 (LRP5) or LRP6.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:11448771","PMID:20093360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Wnt-Frizzled-LRP5/6 complex","synonyms":[{"name":"Frizzled-LRP5/6 complex","type":"related"},{"name":"Fz/Wnt/LRP6 complex","type":"narrow"},{"name":"WNT-FZD-LRP5 complex","type":"narrow"},{"name":"WNT-FZD-LRP6 complex","type":"narrow"},{"name":"Wnt receptor complex","type":"broad"},{"name":"Wnt-FZD-LRP5/6 trimeric complex","type":"exact"},{"name":"Wnt-induced Frizzled-LRP5/6 complex","type":"related"},{"name":"Wnt.Fz.LRP ternary complex","type":"exact"}],"termid":"GO:1990851"}


id: PBO:0061873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP antisense RNA 1","termid":"PBO:0061873"}


id: PR:O94537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ire1 gene.","definition_xrefs":["UniProtKB:O94537","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.01","synonyms":[{"name":"Spom972h-ire1","type":"exact"}],"termid":"PR:O94537"}


id: PBO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Cdc10","termid":"PBO:0004192"}


id: PBO:0087274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET-domain lysine-N-methyltransferase; catalyzes the formation of dimethyllysine residues on the large ribosomal subunit proteins L23 (Rpl23Ap and Rpl23Bp) and monomethyllysine residues on L18 (Rps18Ap and Rps18Bp)","termid":"PBO:0087274"}


id: GO:1900915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of octadecene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"regulation of octadecene biosynthetic process","termid":"GO:1900914"},{"relation_name":"is_a","term_name":"negative regulation of octadecene metabolic process","termid":"GO:1900918"},{"relation_name":"negatively_regulates","term_name":"octadecene biosynthetic process","termid":"GO:1900682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of octadecene biosynthetic process","synonyms":[{"name":"down regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"down regulation of octadecene anabolism","type":"related"},{"name":"down regulation of octadecene biosynthesis","type":"related"},{"name":"down regulation of octadecene biosynthetic process","type":"exact"},{"name":"down regulation of octadecene formation","type":"related"},{"name":"down regulation of octadecene synthesis","type":"related"},{"name":"down-regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"down-regulation of octadecene anabolism","type":"related"},{"name":"down-regulation of octadecene biosynthesis","type":"related"},{"name":"down-regulation of octadecene biosynthetic process","type":"exact"},{"name":"down-regulation of octadecene formation","type":"related"},{"name":"down-regulation of octadecene synthesis","type":"related"},{"name":"downregulation of 1-octadecene biosynthetic process","type":"related"},{"name":"downregulation of octadecene anabolism","type":"related"},{"name":"downregulation of octadecene biosynthesis","type":"related"},{"name":"downregulation of octadecene biosynthetic process","type":"exact"},{"name":"downregulation of octadecene formation","type":"related"},{"name":"downregulation of octadecene synthesis","type":"related"},{"name":"inhibition of 1-octadecene biosynthetic process","type":"narrow"},{"name":"inhibition of octadecene anabolism","type":"narrow"},{"name":"inhibition of octadecene biosynthesis","type":"narrow"},{"name":"inhibition of octadecene biosynthetic process","type":"narrow"},{"name":"inhibition of octadecene formation","type":"narrow"},{"name":"inhibition of octadecene synthesis","type":"narrow"},{"name":"negative regulation of 1-octadecene biosynthetic process","type":"related"},{"name":"negative regulation of octadecene anabolism","type":"related"},{"name":"negative regulation of octadecene biosynthesis","type":"related"},{"name":"negative regulation of octadecene formation","type":"related"},{"name":"negative regulation of octadecene synthesis","type":"related"}],"termid":"GO:1900915"}


id: FYPO:0007122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of assembly of one or more mitochondrial respiratory chain complexes is decreased.","definition_xrefs":["PMID:31350787","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex assembly during vegetative growth","type":"exact"},{"name":"decreased mitochondrial respiratory complex assembly","type":"exact"},{"name":"reduced mitochondrial respiratory chain complex assembly","type":"exact"}],"termid":"FYPO:0007122"}


id: PBO:0084574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of unknown function; overexpression suppresses NaCl sensitivity of sro7 mutant cells by restoring sodium pump (Ena1p) localization to the plasma membrane","termid":"PBO:0084574"}


id: PBO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn4","termid":"PBO:0000803"}


id: PBO:0056684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 8, small nucleolar RNA host gene","termid":"PBO:0056684"}


id: GO:0038019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of a Wnt receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive a Wnt signal. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["PMID:19643732","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Wnt receptor recycling","synonyms":[{"name":"Frizzled recycling","type":"narrow"}],"termid":"GO:0038019"}


id: PBO:0051080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant epsilon","termid":"PBO:0051080"}


id: FYPO:0005228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing doxorubicin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on doxorubicin","synonyms":[{"name":"normal cell population growth in presence of doxorubicin","type":"exact"},{"name":"normal cell population growth on doxorubicin","type":"exact"},{"name":"normal cellular response to doxorubicin","type":"related"},{"name":"normal vegetative cell population growth on doxorubicin","type":"exact"}],"termid":"FYPO:0005228"}


id: PBO:0064108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting","termid":"PBO:0064108"}


id: PBO:0065854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 5","termid":"PBO:0065854"}


id: GO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine uptake","termid":"GO:0051631"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acetylcholine uptake","synonyms":[{"name":"activation of acetylcholine uptake","type":"narrow"},{"name":"positive regulation of acetylcholine import","type":"exact"},{"name":"stimulation of acetylcholine uptake","type":"narrow"},{"name":"up regulation of acetylcholine uptake","type":"exact"},{"name":"up-regulation of acetylcholine uptake","type":"exact"},{"name":"upregulation of acetylcholine uptake","type":"exact"}],"termid":"GO:0051633"}


id: PBO:0087488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C) complex; COMPASS methylates Lys4 of histone H3 and functions in silencing at telomeres; has a C-terminal Sdc1 Dpy-30 Interaction (SDI) domain that mediates binding to Sdc1p; similar to trithorax-group protein ASH2L","termid":"PBO:0087488"}


id: PBO:0051018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 receptor","termid":"PBO:0051018"}


id: GO:0036344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation and organization of a platelet, a non-nucleated disk-shaped cell formed by extrusion from megakaryocytes, found in the blood of all mammals, and mainly involved in blood coagulation.","definition_xrefs":["GOC:BHF","GOC:vk","CL:0000233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet morphogenesis","termid":"GO:0036344"}


id: SO:0001908
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the extension of a genomic feature from within the feature rather than from the terminus of the feature, with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_elongation","termid":"SO:0001907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_feature_elongation","synonyms":[{"name":"Jannovar:internal_feature_elongation","type":"exact"},{"name":"internal feature elongation","type":"exact"}],"termid":"SO:0001908"}


id: GO:0032534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the formation of a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus organization","termid":"GO:0032530"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"microvillus assembly","termid":"GO:0030033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of microvillus assembly","synonyms":[{"name":"regulation of microvillus biogenesis","type":"related"}],"termid":"GO:0032534"}


id: GO:1905559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["PMID:18765790","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"activation of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"activation of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"activation of mitotic nuclear envelope degradation","type":"narrow"},{"name":"activation of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"positive regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"positive regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"positive regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"up regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"up regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"upregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"upregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"upregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"upregulation of mitotic nuclear envelope disassembly","type":"exact"}],"termid":"GO:1905559"}


id: GO:0007137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase II, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis II.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase","termid":"GO:0051323"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051327"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051327"],"is_obsolete":false,"name":"meiotic metaphase II","termid":"GO:0007137"}


id: GO:0033734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-benzylsuccinyl-CoA + 2 electron-transferring flavoprotein = (E)-2-benzylidenesuccinyl-CoA + 2 reduced electron-transferring flavoprotein.","definition_xrefs":["EC:1.3.8.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-benzylsuccinyl-CoA dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0330","RHEA:20876"],"synonyms":[{"name":"(R)-benzylsuccinyl-CoA:(acceptor) oxidoreductase activity","type":"related"},{"name":"(R)-benzylsuccinyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"BbsG","type":"related"}],"termid":"GO:0033734"}


id: GO:0030132
data:
  {"annotated_genes":["SJAG_00800","SJAG_00104","SJAG_02805","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104765,108110,73683,77115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin-coated pit","termid":"GO:0005905"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"clathrin coat of coated pit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030132","terms_by_termid":{"GO:0030122":null}}


id: PBO:0053543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 548","termid":"PBO:0053543"}


id: GO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the ureter gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072199"}


id: GO:1905175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:19088079","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"down regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"inhibition of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905175"}


id: PBO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 3","termid":"PBO:0072187"}


id: GO:0035208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) that are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"positively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte proliferation","synonyms":[{"name":"activation of hemocyte proliferation","type":"narrow"},{"name":"positive regulation of arthropod blood cell proliferation","type":"exact"},{"name":"stimulation of hemocyte proliferation","type":"narrow"},{"name":"up regulation of hemocyte proliferation","type":"exact"},{"name":"up-regulation of hemocyte proliferation","type":"exact"},{"name":"upregulation of hemocyte proliferation","type":"exact"}],"termid":"GO:0035208"}


id: GO:2000106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte apoptotic process","synonyms":[{"name":"regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000106"}


id: GO:0007550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of dosage compensation (obsolete GO:0007550)","synonyms":[{"name":"establishment of dosage compensation","type":"exact"}],"termid":"GO:0007550"}


id: PBO:0054733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2142","termid":"PBO:0054733"}


id: GO:0034715
data:
  {"annotated_genes":["SJAG_01301","SJAG_03469","SJAG_03279","SJAG_00147","SJAG_02843","SJAG_02304"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72421,73448,74939,76094,77997,85341],"is_not":false,"summary":null,"term":"GO:0034715"}]},"cv_name":"cellular_component","definition":"A protein complex that contains pICln (CLNS1A) and several Sm proteins, including SmD1, SmD2, SmE, SmF, and SmG.","definition_xrefs":["PMID:11713266","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01301":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03279":null,"SJAG_03469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pICln-Sm protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"6S pICln complex","type":"exact"}],"termid":"GO:0034715","terms_by_termid":{"GO:0034715":null}}


id: PBO:0075072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121B","termid":"PBO:0075072"}


id: PR:Q9UTI6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ethanolamine-phosphate cytidylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10739:SF14","PRO:DNx","OMA:SCHPO01554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine-phosphate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.05c","secondary_identifiers":["UniProtKB:Q9UTI6"],"synonyms":[{"name":"CTP:phosphoethanolamine cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PCYT2","type":"exact"},{"name":"phosphorylethanolamine transferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI6"}


id: GO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior temporal gyrus over time, from its formation to the mature structure. The superior temporal gyrus is a portion of the cerebral cortex that extends from the lateral sulcus to the superior temporal sulcus.","definition_xrefs":["PMID:11484000","GOC:BHF","FMA:61905","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior temporal gyrus development","termid":"GO:0071109"}


id: GO:0005548
data:
  {"annotated_genes":["SJAG_01731","SJAG_03746","SJAG_03100","SJAG_04370","SJAG_03741","SJAG_01225","SJAG_01229","SJAG_01305","SJAG_01470","SJAG_01945","SJAG_03338","SJAG_00669","SJAG_04984","SJAG_05209","SJAG_03416","SJAG_03710","SJAG_02897","SJAG_00576","SJAG_06440","SJAG_00230","SJAG_03721","SJAG_16459","SJAG_03172"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[95662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[97523,98477,70101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[90483,94084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[94085,96396,90484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[93698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[94086,90485,95664,96397,109057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[93699,75723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[95665,109059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[90486,94087,109060,95666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[99898,72818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[85096,86819,103932,103131,100373,105982,93633,94803,104071,102219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of phospholipids into, out of or within a cell, or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00669":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phospholipid transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5678749","Reactome:R-HSA-216757","GO:0008497","Reactome:R-HSA-8857662","Reactome:R-HSA-8865637","Reactome:R-HSA-8867876","Reactome:R-HSA-5678706","Reactome:R-HSA-382553"],"termid":"GO:0005548","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120014":null,"GO:0120019":null,"GO:0140345":null,"GO:0140346":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: PATO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000926 intercross fertility (obsolete PATO:0000926)","termid":"PATO:0000926"}


id: GO:0036029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and prostate-specific antigen (KLK3); formation of the complex inhibits the serine protease activity of prostate-specific antigen.","definition_xrefs":["PMID:1725227","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein C inhibitor-KLK3 complex","synonyms":[{"name":"PCI-KLK3 complex","type":"exact"},{"name":"SERPINA5-KLK3 complex","type":"exact"},{"name":"plasma serine protease inhibitor-KLK3 complex","type":"exact"},{"name":"protein C inhibitor-kallikrein-3 complex","type":"exact"},{"name":"protein C inhibitor-prostate-specific antigen complex","type":"exact"},{"name":"serpin A5-KLK3 complex","type":"exact"}],"termid":"GO:0036029"}


id: PBO:0082586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes","termid":"PBO:0082586"}


id: GO:0031946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"}


id: FYPO:0002482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable spheroid vegetative cell","synonyms":[{"name":"inviable round vegetative cell","type":"related"},{"name":"inviable rounded vegetative cell","type":"exact"},{"name":"inviable spheroid cell","type":"exact"},{"name":"inviable spheroid cell during vegetative growth","type":"exact"},{"name":"inviable spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; spheroid vegetative cell","type":"exact"},{"name":"spheroid inviable cell","type":"exact"}],"termid":"FYPO:0002482"}


id: PBO:0029639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_TPCK","termid":"PBO:0029639"}


id: GO:0034452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dynactin complex; a large protein complex that activates dynein-based motor activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008092"],"is_obsolete":false,"name":"dynactin binding","termid":"GO:0034452"}


id: GO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"endocardial cushion formation","termid":"GO:0003272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in endocardial cushion formation","termid":"GO:0003273"}


id: PBO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 1","termid":"PBO:0048180"}


id: PBO:0068196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 503","termid":"PBO:0068196"}


id: GO:0008331
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73834],"is_not":false,"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a high voltage-gated channel. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","PMID:16382099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"L-type calcium channel","type":"related"},{"name":"N-type calcium channel","type":"related"},{"name":"P-type calcium channel","type":"related"},{"name":"Q-type calcium channel","type":"related"},{"name":"high voltage gated calcium channel activity","type":"exact"},{"name":"high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008331","terms_by_termid":{"GO:0008331":null}}


id: GO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an appendage over time, from its formation to the mature structure. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage development","termid":"GO:0048736"}


id: PBO:0087129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein; promotes elongation, regulates termination, and carries poly(A) mRNA from nucleus to cytoplasm; represses translation initiation by binding eIF4G; required for pre-mRNA splicing; interacts with E3 ubiquitin ligase Bre1p, linking histone ubiquitination to mRNA processing; may have role in telomere maintenance; dissociation from mRNAs promoted by Mtr10p; phosphorylated by Sky1p in cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0087129"}


id: GO:0022878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sucrose(out) = protein histidine + sucrose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0016740","GO:0022857","GO:0003674","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sucrose phosphotransferase system transporter activity","secondary_identifiers":["RHEA:49236","MetaCyc:SUCROSEPHOSPHO-RXN"],"synonyms":[{"name":"sucrose PTS transporter activity","type":"exact"}],"termid":"GO:0022878"}


id: GO:0033645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collection of membranous structures involved in transport within the host cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endomembrane system","termid":"GO:0033645"}


id: PBO:0062032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 1","termid":"PBO:0062032"}


id: GO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of pathway-restricted SMAD protein phosphorylation. Pathway-restricted SMAD proteins and common-partner SMAD proteins are involved in the transforming growth factor beta receptor signaling pathways.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pathway-restricted SMAD protein phosphorylation (obsolete GO:0060394)","termid":"GO:0060394"}


id: SO:0000788
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000788 cloned (obsolete SO:0000788)","termid":"SO:0000788"}


id: GO:0018853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + perillyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0731"],"gene_count":0,"genotype_count":0,"name":"obsolete perillyl-CoA synthetase activity (obsolete GO:0018853)","secondary_identifiers":["EC:6.2.1.-"],"synonyms":[{"name":"perillyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0018853"}


id: PR:000027733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 phosphorylated 1 in Schizosaccharomyces pombe. Example: UniProtKB:Q9USI6-1, Ser-1444, MOD:00046.","definition_xrefs":["PMID:15184401","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC645.05c","synonyms":[{"name":"Spom-myo2/Phos:1","type":"exact"}],"termid":"PR:000027733"}


id: PBO:0038801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 7","termid":"PBO:0038801"}


id: GO:0010069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of the zygote in a plane perpendicular to the long axis of the embryo sac to produce a larger basal cell near the micropyle and a small terminal cell close to what was the central cell and is now the developing endosperm. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0865427429","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"is_a","term_name":"zygote asymmetric cell division","termid":"GO:0010070"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"zygote asymmetric cytokinesis in embryo sac","termid":"GO:0010069"}


id: PBO:0075864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 4","termid":"PBO:0075864"}


id: PBO:0030136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_mitotic_S_phase","termid":"PBO:0030136"}


id: GO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells produce antibodies with increased antigen affinity. This is accomplished by somatic hypermutation and selection for B cells which produce higher affinity antibodies to antigen.","definition_xrefs":["GOC:jal","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral B cell selection","termid":"GO:0002343"},{"relation_name":"part_of","term_name":"immunoglobulin production involved in immunoglobulin-mediated immune response","termid":"GO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"B cell affinity maturation","synonyms":[{"name":"B lymphocyte affinity maturation","type":"exact"},{"name":"B-cell affinity maturation","type":"exact"},{"name":"B-lymphocyte affinity maturation","type":"exact"}],"termid":"GO:0002344"}


id: PBO:0082379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-1,3-glucanosyltransferase required for cell wall assembly; also has role in transcriptional silencing; localizes to cell surface via glycosylphosphatidylinositol (GPI) anchor, also found at nuclear periphery; genetic interactions with histone H3 lysine acetyltransferases GCN5 and SAS3 indicate functions for Gas1p in DNA damage response and cell cycle regulation; protein demonstrates amyloid properties in vivo","termid":"PBO:0082379"}


id: GO:0009336
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation adenylylsulfate from sulfate and ATP.","definition_xrefs":["PMID:15184554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sulfate adenylyltransferase complex (ATP)","synonyms":[{"name":"sulphate adenylyltransferase complex (ATP)","type":"exact"}],"termid":"GO:0009336"}


id: PBO:0082274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anchorage subunit of a-agglutinin of a-cells; highly O-glycosylated protein with N-terminal secretion signal and C-terminal signal for addition of GPI anchor to cell wall, linked to adhesion subunit Aga2p via two disulfide bonds; AGA1 has a paralog, FIG2, that arose from the whole genome duplication","termid":"PBO:0082274"}


id: GO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: rhamnose(out) + H+(out) = rhamnose(in) + H+(in).","definition_xrefs":["TC:2.A.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"rhamnose transmembrane transporter activity","termid":"GO:0015153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"rhamnose:proton symporter activity","synonyms":[{"name":"rhamnose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015561"}


id: PBO:0084414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Magnesium-dependent acid phosphatase; member of the haloacid dehalogenase superfamily; non-essential gene","termid":"PBO:0084414"}


id: PBO:0079752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1 like 1","termid":"PBO:0079752"}


id: GO:0010833
data:
  {"annotated_genes":["SJAG_01677","SJAG_01378","SJAG_00939","SJAG_03685","SJAG_02212","SJAG_02194","SJAG_01916","SJAG_04586","SJAG_00112","SJAG_03855","SJAG_03092","SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73654,101448],"is_not":false,"summary":null,"term":"GO:0010833"},{"annotations":[95908],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0032211"},{"annotations":[75920],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[112634,93711,84632,108072,86539,70775,104552,85036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"}]},"cv_name":"biological_process","definition":"Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and lengthening the telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_01916":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via telomere lengthening","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010833","terms_by_termid":{"GO:0007004":null,"GO:0010833":null,"GO:0032210":null,"GO:0032211":null}}


id: PBO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and centriole associated 1 like","termid":"PBO:0075502"}


id: PBO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp2","termid":"PBO:0002880"}


id: PBO:0059892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 15","termid":"PBO:0059892"}


id: PBO:0084183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS","termid":"PBO:0084183"}


id: GO:0008388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 15-alpha-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"testosterone 15-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2A4","type":"narrow"}],"termid":"GO:0008388"}


id: PBO:0110414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 4","termid":"PBO:0110414"}


id: FYPO:0006811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which large chromosomal rearrangements occur at a normal (i.e. indistinguishable from wild type) frequency. Chromosomal rearrangements may include deletions, duplications, inversions, and translocations.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal gross chromosomal rearrangement frequency","synonyms":[{"name":"normal occurrence of gross chromosomal rearrangement","type":"exact"}],"termid":"FYPO:0006811"}


id: PBO:0074554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 7","termid":"PBO:0074554"}


id: PBO:0067385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 489, pseudogene","termid":"PBO:0067385"}


id: PBO:0079164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 33","termid":"PBO:0079164"}


id: PBO:0052520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 33","termid":"PBO:0052520"}


id: GO:0098921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an endocannabinoid ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by lipid","termid":"GO:0098920"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by endocannabinoid","termid":"GO:0099542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}


id: GO:0072337
data:
  {"annotated_genes":["SJAG_03577","SJAG_05213","SJAG_05175","SJAG_01660","SJAG_00543","SJAG_03503","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902603"},{"annotations":[73412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904947"},{"annotations":[91618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[92174,93181,114907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[72265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"}]},"cv_name":"biological_process","definition":"The directed movement of modified amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03503":null,"SJAG_03577":null,"SJAG_05175":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"modified amino acid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid derivative transport","type":"exact"}],"termid":"GO:0072337","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0098717":null,"GO:0160007":null,"GO:1902603":null,"GO:1904947":null}}


id: PBO:0082964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; possibly involved in vacuolar protein degradation; not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase); null mutants exhibit normal growth; contains two PH-like domains","termid":"PBO:0082964"}


id: PBO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_methyltransferase_activity","termid":"PBO:0030433"}


id: PBO:0034764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","termid":"PBO:0034764"}


id: PBO:0072418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 23","termid":"PBO:0072418"}


id: PBO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rhp41","termid":"PBO:0002596"}


id: PBO:0059001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated C","termid":"PBO:0059001"}


id: PBO:0000691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coproporphyrinogen III oxidase (predicted)","termid":"PBO:0000691"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: GO:0034971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 17 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R17 methylation (obsolete GO:0034971)","synonyms":[{"name":"histone H3 R17 methylation","type":"exact"},{"name":"histone H3R17me","type":"exact"},{"name":"histone lysine H3 R17 methylation","type":"exact"}],"termid":"GO:0034971"}


id: GO:0071035
data:
  {"annotated_genes":["SJAG_04153","SJAG_00854","SJAG_04006","SJAG_04824","SJAG_01191","SJAG_01818","SJAG_03745","SJAG_04321","SJAG_03984","SJAG_04084","SJAG_01176","SJAG_04818","SJAG_01521","SJAG_03179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70197,70718,71202,71622,72252,74383,76457,84205,93387,98335,102844,103857,112102,112573],"is_not":false,"summary":null,"term":"GO:0071035"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, including RNA fragments released as part of processing the primary transcript into multiple mature rRNA species, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA.","definition_xrefs":["GOC:krc","PMID:18591258","PMID:15173578","PMID:15935758","PMID:17652137","PMID:15572680","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"},{"relation_name":"is_a","term_name":"nuclear polyadenylation-dependent ncRNA catabolic process","termid":"GO:0071046"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent rRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0071035","terms_by_termid":{"GO:0071035":null}}


id: GO:0061831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature spermatids and Sertoli cells at the luminal end of the Sertoli cell.","definition_xrefs":["GOC:dph","PMID:22332112","GOC:bc","GOC:aruk","PMID:23546604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical ectoplasmic specialization","synonyms":[{"name":"apical ES","type":"exact"}],"termid":"GO:0061831"}


id: GO:0005681
data:
  {"annotated_genes":["SJAG_01504","SJAG_01408","SJAG_04433","SJAG_04318","SJAG_00322","SJAG_01919","SJAG_00563","SJAG_02317","SJAG_01547","SJAG_00313","SJAG_03427","SJAG_03210","SJAG_02687","SJAG_02844","SJAG_02862","SJAG_01819","SJAG_04163","SJAG_03070","SJAG_04497","SJAG_03890","SJAG_02558","SJAG_00504","SJAG_02279","SJAG_03966","SJAG_05211","SJAG_01810","SJAG_04214","SJAG_04222","SJAG_02772","SJAG_04025","SJAG_00859","SJAG_02018","SJAG_05224","SJAG_03469","SJAG_04230","SJAG_05240","SJAG_03498","SJAG_02688","SJAG_01214","SJAG_03711","SJAG_02905","SJAG_03687","SJAG_05349","SJAG_00363","SJAG_04783","SJAG_03369","SJAG_04117","SJAG_02843","SJAG_02304","SJAG_04898","SJAG_02469","SJAG_00643","SJAG_03983","SJAG_03410","SJAG_03430","SJAG_01629","SJAG_02560","SJAG_02620","SJAG_00225","SJAG_00474","SJAG_02308","SJAG_02078","SJAG_02185","SJAG_00094","SJAG_01152","SJAG_03995","SJAG_03993","SJAG_00414","SJAG_00597","SJAG_04529","SJAG_01200","SJAG_04385","SJAG_02879","SJAG_03245","SJAG_01186","SJAG_00206","SJAG_03601","SJAG_01654","SJAG_04694","SJAG_02295","SJAG_05208","SJAG_03279","SJAG_00446","SJAG_00498","SJAG_01331","SJAG_05009","SJAG_03112","SJAG_04055","SJAG_04427","SJAG_03460","SJAG_01008","SJAG_01308","SJAG_04911","SJAG_02455","SJAG_02722","SJAG_01433","SJAG_00911","SJAG_03547","SJAG_00147","SJAG_01301","SJAG_00058","SJAG_00571","SJAG_00602","SJAG_02005","SJAG_16453","SJAG_01315","SJAG_00639","SJAG_00577","SJAG_01144","SJAG_02227","SJAG_03301","SJAG_01452","SJAG_02396","SJAG_00809","SJAG_00249","SJAG_00076","SJAG_05212","SJAG_01870","SJAG_01557","SJAG_05235","SJAG_04914","SJAG_02686","SJAG_00989","SJAG_05025","SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59053,70440,73492,73961,74667,75930,77334,85342,85398,86126,87726,88044,88635,89343,93544,113740,115268],"is_not":false,"summary":null,"term":"GO:0005681"},{"annotations":[70533,104054,107789,109693,109442,88659,72763,69975,71974,102140,113585,106241,74832,70404,75079,73449,73649,88655,77140,77527,72202,70509,104673,110063,114013,70467,74942,75884,78067,102676,91072,77112,78001,90209,73429,74806,109002,75368,76391,76098,77732,83584,71994,71826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071013"},{"annotations":[72117,78002,76099,109873,115431,87480,93983,78232,97481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[92552,109695,72679,76702,91419,69976,92963,77295,112648,94611,115606,107791,76890,98970,106523,90993,108265,71966,113587,94680,113918,96844,91689,103561,107101,100354,104056,84145,100848,94162,105673,112149,95225,98803,102925,101863,84153,89404,112150,91253,102236,83586,91478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071014"},{"annotations":[72765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071020"},{"annotations":[76097,75215,92049,94959,72423,78000,105201,111503,77526,104057,109449,107102,76557,74941,75282,78665,109696,72891,70466,87483,74369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071011"},{"annotations":[72933,76823,70771,76334,114992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[114993,71965,76889,76335,76824,78029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[86083,77456,105307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[76412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[109877,97988,75078,73428,115434,72791,98807,89407,93986,106517,102242,71973,105959,72112,70532,75883,102785,97484,109213,108915,107124,77731,78230,92437,101866,91258,105205,103330,70030,91695,110481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"},{"annotations":[75132,77296,100849,78443,74671,91893,100817,92268,83587,99297,93823,110492,107794,115608,103564,101193,84351,71118,114683,76490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005684"}]},"cv_name":"cellular_component","definition":"Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.","definition_xrefs":["PMID:19239890","GOC:editors","GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":125,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00563":null,"SJAG_00564":null,"SJAG_00571":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00639":null,"SJAG_00643":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01144":null,"SJAG_01152":null,"SJAG_01186":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01315":null,"SJAG_01331":null,"SJAG_01408":null,"SJAG_01433":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01547":null,"SJAG_01557":null,"SJAG_01629":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_01919":null,"SJAG_02005":null,"SJAG_02018":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02308":null,"SJAG_02317":null,"SJAG_02396":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02620":null,"SJAG_02686":null,"SJAG_02687":null,"SJAG_02688":null,"SJAG_02722":null,"SJAG_02772":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02862":null,"SJAG_02879":null,"SJAG_02905":null,"SJAG_03070":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03279":null,"SJAG_03301":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03498":null,"SJAG_03547":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03890":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04025":null,"SJAG_04055":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04385":null,"SJAG_04427":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_04914":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05208":null,"SJAG_05211":null,"SJAG_05212":null,"SJAG_05224":null,"SJAG_05235":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spliceosomal complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Spliceosome"],"synonyms":[{"name":"spliceosome","type":"broad"},{"name":"spliceosome complex","type":"exact"}],"termid":"GO:0005681","terms_by_termid":{"GO:0000243":null,"GO:0005681":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071011":null,"GO:0071013":null,"GO:0071014":null,"GO:0071020":null,"GO:0071021":null}}


id: GO:1905673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysosome organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25561470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"is_a","term_name":"regulation of lysosome organization","termid":"GO:1905671"},{"relation_name":"positively_regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lysosome organization","synonyms":[{"name":"activation of lysosome organisation","type":"narrow"},{"name":"activation of lysosome organization","type":"narrow"},{"name":"activation of lysosome organization and biogenesis","type":"related"},{"name":"positive regulation of lysosome organisation","type":"exact"},{"name":"positive regulation of lysosome organization and biogenesis","type":"related"},{"name":"up regulation of lysosome organisation","type":"exact"},{"name":"up regulation of lysosome organization","type":"exact"},{"name":"up regulation of lysosome organization and biogenesis","type":"related"},{"name":"up-regulation of lysosome organisation","type":"exact"},{"name":"up-regulation of lysosome organization","type":"exact"},{"name":"up-regulation of lysosome organization and biogenesis","type":"related"},{"name":"upregulation of lysosome organisation","type":"exact"},{"name":"upregulation of lysosome organization","type":"exact"},{"name":"upregulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905673"}


id: PBO:0073733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A2 antisense RNA 1","termid":"PBO:0073733"}


id: GO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4,4-dimethyl-9beta,19-cyclopropylsterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy, 4-beta-methyl-9beta,19-cyclopropylsterol + 3 NADP+ + 3 H2O.","definition_xrefs":["PMID:14653780","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"4,4-dimethyl-9beta,19-cyclopropylsterol oxidation","synonyms":[{"name":"4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080064"}


id: PBO:0011488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing protein, predicted ubiquitin ligase (predicted)","termid":"PBO:0011488"}


id: PBO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6 (predicted)","termid":"PBO:0001720"}


id: PBO:0074306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX9 ribosome biogenesis factor","termid":"PBO:0074306"}


id: PBO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug115","termid":"PBO:0016909"}


id: PBO:0048169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2E3 antisense RNA 1","termid":"PBO:0048169"}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["GOC:TermGenie","PMID:15684033","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: PBO:0071040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 42","termid":"PBO:0071040"}


id: PBO:0042743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein Q","termid":"PBO:0042743"}


id: PBO:0031556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_catalytic_activity","termid":"PBO:0031556"}


id: PBO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 65","termid":"PBO:0071224"}


id: FYPO:0004352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004352"}


id: PBO:0064515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 2","termid":"PBO:0064515"}


id: GO:0010481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the physical partitioning and separation of an epidermal cell, any of the cells making up the epidermis, into daughter cells.","definition_xrefs":["PMID:17450124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal cell division","synonyms":[{"name":"hypodermal cell division","type":"related"}],"termid":"GO:0010481"}


id: PBO:0074336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1","termid":"PBO:0074336"}


id: PBO:0086576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0086576"}


id: FYPO:0002806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenate ions. Cells stop growing (and may die) at a concentration of arsenate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to arsenate","synonyms":[{"name":"hypersensitive to arsenate","type":"exact"},{"name":"sensitive to arsenate during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenate during vegetative growth","type":"exact"},{"name":"sensitive to arsenate ions","type":"exact"}],"termid":"FYPO:0002806"}


id: MOD:00839
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing deuteriumm, (2)H.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2)H deuterium labeled residue","termid":"MOD:00839"}


id: MOD:02065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: PBO:0083726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 121 kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in ER and Golgi inheritance in small buds; relocalizes away from bud neck upon DNA replication stress","termid":"PBO:0083726"}


id: PBO:0001489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase (predicted)","termid":"PBO:0001489"}


id: PBO:0086900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter of the MRP subfamily; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds; MRP stands for multidrug resistance-associated protein","termid":"PBO:0086900"}


id: GO:0032784
data:
  {"annotated_genes":["SJAG_03118","SJAG_04536","SJAG_00150","SJAG_04115","SJAG_03061","SJAG_03967","SJAG_01213","SJAG_01149","SJAG_02551","SJAG_00483","SJAG_01707","SJAG_01151","SJAG_02057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115645],"is_not":false,"summary":null,"term":"GO:0032784"},{"annotations":[114644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[70446,78406,107623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[102414,76973,105475,71519,113709,111954,70929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[103211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034243"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00483":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01707":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null,"SJAG_04115":null,"SJAG_04536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of DNA-templated transcription elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"regulation of DNA-templated transcription, elongation","type":"exact"},{"name":"regulation of RNA elongation","type":"broad"},{"name":"regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"regulation of transcriptional elongation","type":"broad"},{"name":"transcription elongation regulator activity","type":"related"}],"termid":"GO:0032784","terms_by_termid":{"GO:0032784":null,"GO:0032786":null,"GO:0032968":null,"GO:0034243":null,"GO:0034244":null}}


id: PBO:0071262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 7","termid":"PBO:0071262"}


id: GO:0019757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosinolates, substituted thioglycosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glycosinolate metabolic process","synonyms":[{"name":"glycosinolate metabolism","type":"exact"}],"termid":"GO:0019757"}


id: GO:0030708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11591336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female germ-line cyst encapsulation","termid":"GO:0048139"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived female germ-line cyst encapsulation","termid":"GO:0030708"}


id: GO:0047691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aspulvinone E + 2 dimethylallyl diphosphate = aspulvinone H + 2 diphosphate.","definition_xrefs":["EC:2.5.1.35","RHEA:13809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aspulvinone dimethylallyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03799","MetaCyc:ASPULVINONE-DIMETHYLALLYLTRANSFERASE-RXN"],"synonyms":[{"name":"dimethylallyl pyrophosphate:aspulvinone dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:aspulvinone-E dimethylallyltransferase activity","type":"related"}],"termid":"GO:0047691"}


id: GO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through gene conversion.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"}


id: PBO:0004640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ash2-trithorax family protein","termid":"PBO:0004640"}


id: PBO:0071689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 21","termid":"PBO:0071689"}


id: PBO:0041713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 4","termid":"PBO:0041713"}


id: GO:0050204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxalomalate = glyoxylate + oxaloacetate.","definition_xrefs":["EC:4.1.3.13","RHEA:22032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"oxalomalate lyase activity","secondary_identifiers":["MetaCyc:OXALOMALATE-LYASE-RXN","KEGG_REACTION:R00477"],"synonyms":[{"name":"3-oxalomalate glyoxylate-lyase (oxaloacetate-forming)","type":"related"},{"name":"3-oxalomalate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0050204"}


id: PBO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.48","termid":"PBO:0000388"}


id: PBO:0077155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLCD4-RWDD3 readthrough","termid":"PBO:0077155"}


id: FYPO:0001427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in a single round of rereplication of the entire genome, which takes place more slowly than normal replication.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in slow rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in slow rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in slow rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in slow re-replication","type":"exact"},{"name":"slow mitotic DNA re-replication","type":"related"},{"name":"slow mitotic DNA rereplication","type":"related"}],"termid":"FYPO:0001427"}


id: FYPO:0001452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to water deprivation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to water deprivation","synonyms":[{"name":"increased growth during cellular response to water deprivation","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to water deprivation","type":"exact"},{"name":"resistance to water deprivation during mitotic cell cycle","type":"related"},{"name":"resistance to water deprivation during vegetative growth","type":"exact"},{"name":"resistant to dehydration","type":"exact"},{"name":"resistant to water deprivation","type":"exact"}],"termid":"FYPO:0001452"}


id: PBO:0029490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_elongated_cells_(obsolete_FYPO:0002225)","termid":"PBO:0029490"}


id: GO:0030018
data:
  {"annotated_genes":["SJAG_02831"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107292],"is_not":false,"summary":null,"term":"GO:0030018"}]},"cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z disc","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018","terms_by_termid":{"GO:0030018":null}}


id: PBO:0058983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT1 super elongation complex subunit","termid":"PBO:0058983"}


id: PBO:0064103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi like RNA-mediated gene silencing 4","termid":"PBO:0064103"}


id: PBO:0029317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_subtelomere","termid":"PBO:0029317"}


id: MOD:00202
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to D-serine.","definition_xrefs":["RESID:AA0195#SER","PubMed:7973665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine (Ser)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-Ser(Ser)","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Ser)","type":"exact"}],"termid":"MOD:00202"}


id: GO:1901427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a propan-1-ol stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to propan-1-ol","termid":"GO:1901427"}


id: GO:0008121
data:
  {"annotated_genes":["SJAG_01490","SJAG_07006","SJAG_00601","SJAG_02646","SJAG_00755","SJAG_03490","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100403,100825,104390,110008,114395,114867,115775],"is_not":false,"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.","definition_xrefs":["RHEA:11484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0005215","GO:0003824","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164651","EC:7.1.1.8","MetaCyc:1.10.2.2-RXN","GO:0045154","GO:0045153"],"synonyms":[{"name":"cytochrome b566","type":"narrow"},{"name":"cytochrome c1","type":"narrow"},{"name":"complex III (mitochondrial electron transport) activity","type":"narrow"},{"name":"cytochrome","type":"broad"},{"name":"cytochrome a","type":"narrow"},{"name":"cytochrome a3/copper complex","type":"narrow"},{"name":"cytochrome b562","type":"narrow"},{"name":"electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity","type":"related"},{"name":"electron transporter, transferring electrons within cytochrome c oxidase complex activity","type":"related"},{"name":"mitochondrial electron transport complex III","type":"related"},{"name":"soluble cytochrome b562","type":"narrow"},{"name":"ubiquinol-cytochrome c oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c-2 oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c1 oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c2 reductase activity","type":"related"},{"name":"ubiquinol:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"ubiquinone--cytochrome-c oxidoreductase activity","type":"related"},{"name":"ubiquinone-cytochrome c oxidoreductase activity","type":"related"},{"name":"ubiquinone-cytochrome c reductase activity","type":"related"}],"termid":"GO:0008121","terms_by_termid":{"GO:0008121":null}}


id: PBO:0077890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63 regulated 1 like pseudogene 1","termid":"PBO:0077890"}


id: PBO:0066885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 185","termid":"PBO:0066885"}


id: PBO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1 (predicted)","termid":"PBO:0002312"}


id: PBO:0028842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC1R","termid":"PBO:0028842"}


id: GO:0060535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cartilage in the trachea are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage morphogenesis","termid":"GO:0060536"},{"relation_name":"part_of","term_name":"trachea morphogenesis","termid":"GO:0060439"},{"relation_name":"part_of","term_name":"trachea cartilage development","termid":"GO:0060534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage morphogenesis","termid":"GO:0060535"}


id: PBO:0066447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for excision 1-B domain containing","termid":"PBO:0066447"}


id: GO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination at the centromere.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at centromere","termid":"GO:0061806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombination at centromere","synonyms":[{"name":"negative regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061808"}


id: GO:0044229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer host membrane (Gram-negative Bacteria) or inner host membrane and host cell wall (Fungi).","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periplasmic space","termid":"GO:0044229"}


id: GO:0042849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose. L-sorbose is formed by bacterial oxidation of sorbitol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-sorbose metabolic process","termid":"GO:0019312"},{"relation_name":"is_a","term_name":"sorbose biosynthetic process","termid":"GO:0042847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-sorbose biosynthetic process","synonyms":[{"name":"L-sorbose anabolism","type":"exact"},{"name":"L-sorbose biosynthesis","type":"exact"},{"name":"L-sorbose formation","type":"exact"},{"name":"L-sorbose synthesis","type":"exact"}],"termid":"GO:0042849"}


id: GO:1901468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ferulate catabolic process","termid":"GO:1901466"},{"relation_name":"positively_regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferulate catabolic process","synonyms":[{"name":"activation of ferulate breakdown","type":"exact"},{"name":"activation of ferulate catabolic process","type":"narrow"},{"name":"activation of ferulate catabolism","type":"exact"},{"name":"activation of ferulate degradation","type":"exact"},{"name":"positive regulation of ferulate breakdown","type":"exact"},{"name":"positive regulation of ferulate catabolism","type":"exact"},{"name":"positive regulation of ferulate degradation","type":"exact"},{"name":"up regulation of ferulate breakdown","type":"exact"},{"name":"up regulation of ferulate catabolic process","type":"exact"},{"name":"up regulation of ferulate catabolism","type":"exact"},{"name":"up regulation of ferulate degradation","type":"exact"},{"name":"up-regulation of ferulate breakdown","type":"exact"},{"name":"up-regulation of ferulate catabolic process","type":"exact"},{"name":"up-regulation of ferulate catabolism","type":"exact"},{"name":"up-regulation of ferulate degradation","type":"exact"},{"name":"upregulation of ferulate breakdown","type":"exact"},{"name":"upregulation of ferulate catabolic process","type":"exact"},{"name":"upregulation of ferulate catabolism","type":"exact"},{"name":"upregulation of ferulate degradation","type":"exact"}],"termid":"GO:1901468"}


id: GO:0006143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete purine metabolic process (obsolete GO:0006143)","synonyms":[{"name":"purine metabolic process","type":"exact"}],"termid":"GO:0006143"}


id: PBO:0025490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0025490"}


id: PBO:0043339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 antisense RNA 1","termid":"PBO:0043339"}


id: PBO:0063934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pim-3 proto-oncogene, serine/threonine kinase","termid":"PBO:0063934"}


id: PATO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and orange hue with a slight amount of gray.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vermilion","termid":"PATO:0001302"}


id: PBO:0039961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 4","termid":"PBO:0039961"}


id: GO:2000892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellobiose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"},{"relation_name":"is_a","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellobiose catabolic process","synonyms":[{"name":"cellobiose catabolism","type":"exact"}],"termid":"GO:2000892"}


id: GO:0072034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"renal vesicle formation","termid":"GO:0072033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vesicle induction","synonyms":[{"name":"nephron induction","type":"exact"},{"name":"positive regulation of nephron formation","type":"exact"}],"termid":"GO:0072034"}


id: GO:0038032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling process in which G protein-coupled receptor signaling is brought to an end. For example, through the action of GTPase-activating proteins (GAPs) that act to accelerate hydrolysis of GTP to GDP on G-alpha proteins, thereby terminating the transduced signal.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of signal transduction","termid":"GO:0023021"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"termination of G protein-coupled receptor signaling pathway","synonyms":[{"name":"termination of G-protein coupled receptor signaling pathway","type":"exact"},{"name":"termination of G-protein coupled receptor signalling pathway","type":"exact"},{"name":"termination of GPCR signaling pathway","type":"exact"}],"termid":"GO:0038032"}


id: PBO:0066977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 280","termid":"PBO:0066977"}


id: GO:1900634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentadecane.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"},{"relation_name":"is_a","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pentadecane biosynthetic process","synonyms":[{"name":"pentadecane synthesis","type":"exact"},{"name":"pentadecane formation","type":"exact"},{"name":"pentadecane anabolism","type":"exact"},{"name":"pentadecane biosynthesis","type":"exact"}],"termid":"GO:1900634"}


id: GO:0015944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which formate is converted to CO2.","definition_xrefs":["MetaCyc:PWY-1881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formate oxidation","synonyms":[{"name":"formic acid oxidation","type":"exact"}],"termid":"GO:0015944"}


id: PBO:0040629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 associated nuclear protein","termid":"PBO:0040629"}


id: PBO:0091264
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1-Interacting Protein","termid":"PBO:0091264"}


id: PBO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 22","termid":"PBO:0071557"}


id: PBO:0065690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 4","termid":"PBO:0065690"}


id: PATO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000555 heat sensitive (obsolete PATO:0000555)","termid":"PATO:0000555"}


id: GO:2000126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine or tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"negatively_regulates","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of octopamine or tyramine signaling pathway","synonyms":[{"name":"negative regulation of octopamine or tyramine signalling pathway","type":"exact"},{"name":"negative regulation of octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:2000126"}


id: PBO:0088716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase","termid":"PBO:0088716"}


id: PBO:0054755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2166","termid":"PBO:0054755"}


id: CHEBI:75044
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phleomycin","termid":"CHEBI:75044"}


id: GO:1901665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of NAD+ ADP-ribosyltransferase activity","termid":"GO:1901664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of NAD+ ADP-ribosyltransferase activity","synonyms":[{"name":"down regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"down regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"down regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"down regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"down regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"down regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"down-regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"down-regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"down-regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"down-regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"down-regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"down-regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"downregulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"downregulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"downregulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"downregulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"downregulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"downregulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"inhibition of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"inhibition of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"inhibition of NAD+ ADP-ribosyltransferase activity","type":"narrow"},{"name":"inhibition of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"inhibition of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"inhibition of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"negative regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"negative regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"negative regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"negative regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"negative regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901665"}


id: GO:0140961
data:
  {"annotated_genes":["SJAG_01351","SJAG_01344","SJAG_02599","SJAG_00988","SJAG_03497","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89333,93180,104865,114906,70769,93141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a metal ion.","definition_xrefs":["PMID:34442707","PMID:33046888","PMID:26729300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of metal ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular detoxification of metal cation","type":"exact"}],"termid":"GO:0140961","terms_by_termid":{"GO:0098849":null}}


id: GO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"},{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pigment granule transport","synonyms":[{"name":"pigment granule translocation","type":"exact"}],"termid":"GO:0051904"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: _global:assayed_substrate
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a catalytic activity phenotype and a substrate, such as a gene product, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_substrate","termid":"_global:assayed_substrate"}


id: PBO:0027579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_transposon-derived_cDNA_in_cell","termid":"PBO:0027579"}


id: PBO:0017083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Mug117","termid":"PBO:0017083"}


id: GO:0061119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["PMID:19684855","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}


id: PBO:0045455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downregulated RNA in cancer, inhibitor of cell invasion and migration","termid":"PBO:0045455"}


id: GO:0043747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N2-acetyl-L-lysine + H2O = acetate + L-lysine.","definition_xrefs":["RHEA:28598"],"gene_count":0,"genotype_count":0,"name":"obsolete N2-acetyl-L-lysine deacetylase activity (obsolete GO:0043747)","secondary_identifiers":["MetaCyc:RXN-5185"],"synonyms":[{"name":"N-acetyl-lysine deacetylase activity","type":"exact"}],"termid":"GO:0043747"}


id: PBO:0029195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_prometaphase","termid":"PBO:0029195"}


id: GO:0003350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pulmonary myocardium over time, from its initial formation to the mature structure. The pulmonary myocardium is the myocardial tissue present in the pulmonary vein.","definition_xrefs":["GOC:dph","PMID:17638577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"venous blood vessel development","termid":"GO:0060841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary myocardium development","termid":"GO:0003350"}


id: MOD:01263
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#K","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site K","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01263"}


id: GO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a dendritic cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell activation","termid":"GO:0001773"}


id: PBO:0090837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase catalytic subunit Trm8","termid":"PBO:0090837"}


id: PBO:0086232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with glycerol 3-phosphatase; plays a role in anaerobic glycerol production; localizes to the nucleus and cytosol","termid":"PBO:0086232"}


id: PBO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase","termid":"PBO:0075340"}


id: PBO:0066004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein non-catalytic subunit beta","termid":"PBO:0066004"}


id: PBO:0039968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 3","termid":"PBO:0039968"}


id: RO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which both organisms benefit from each other (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutualistically_interacts_with","termid":"RO:0002442"}


id: PBO:0013834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2 histone acetytransferase acytyltransferase complex subunit","termid":"PBO:0013834"}


id: PBO:0058201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4494","termid":"PBO:0058201"}


id: GO:0060877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the otic epithelium in space to define an area or volume in which cells will differentiate to give rise to the semicircular canals.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regionalization involved in semicircular canal formation","termid":"GO:0060877"}


id: PBO:0027465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_thickness_at_old_end_during_vegetative_growth","termid":"PBO:0027465"}


id: GO:0061932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of erythrocyte enucleation","termid":"GO:0061930"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte enucleation","termid":"GO:0061932"}


id: GO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of the two daughter strands of a duplicated chromosome that become apparent between early prophase and metaphase in mitosis and between diplotene and second metaphase in meiosis.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatid (obsolete GO:0005695)","synonyms":[{"name":"chromatid","type":"exact"}],"termid":"GO:0005695"}


id: GO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-mannitol phosphotransferase system transporter activity","termid":"GO:0090565"}


id: PBO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 6","termid":"PBO:0072207"}


id: GO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the formation of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis by host of substance in symbiont (obsolete GO:0052352)","termid":"GO:0052352"}


id: PBO:0080401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS33B late endosome and lysosome associated","termid":"PBO:0080401"}


id: PR:O94408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13829:SF2","PRO:DNx","OMA:SCHPO04961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.01c","secondary_identifiers":["UniProtKB:O94408"],"synonyms":[{"name":"Spom972h-LSM2","type":"exact"}],"termid":"PR:O94408"}


id: GO:0072343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of pancreatic stellate cells, resulting in the expansion of a pancreatic stellate cell population. Pancreatic stellate cells are found in the periacinar space of the exocrine pancreas and in perivascular and periductal regions of the pancreas, and have long cytoplasmic processes that encircle the base of the acinus.","definition_xrefs":["CL:0002410","GOC:mah","PMID:17200706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}


id: PBO:0040361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit k","termid":"PBO:0040361"}


id: GO:0033474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid conjugate, a form of indoleacetic acid covalently bound to another molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin biosynthetic process","termid":"GO:0009851"},{"relation_name":"is_a","term_name":"indoleacetic acid conjugate metabolic process","termid":"GO:0033473"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid conjugate biosynthetic process","synonyms":[{"name":"IAA conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid conjugate anabolism","type":"exact"},{"name":"indoleacetic acid conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid conjugate formation","type":"exact"},{"name":"indoleacetic acid conjugate synthesis","type":"exact"}],"termid":"GO:0033474"}


id: GO:0102366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-beta-hydroxytaxusin + NADPH + O2 + H+ = 2alpha, 7-beta-dihydroxytaxusin + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"7-beta-hydroxytaxusin 2-alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13487"],"termid":"GO:0102366"}


id: PBO:0027270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues","termid":"PBO:0027270"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: GO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:dph","GOC:pr","GOC:tb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031659)","synonyms":[{"name":"G1/S-specific activation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific positive regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific stimulation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific up regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific up-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific upregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031659"}


id: PR:Q10203
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.05","synonyms":[{"name":"Spom972h-SPBC17D1.05","type":"exact"}],"termid":"PR:Q10203"}


id: PBO:0030655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amiloride","termid":"PBO:0030655"}


id: PBO:0085119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif","termid":"PBO:0085119"}


id: GO:0097194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"execution phase of apoptosis","synonyms":[{"name":"apoptosis","type":"narrow"},{"name":"execution phase of apoptotic process","type":"exact"}],"termid":"GO:0097194"}


id: GO:1903574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a cellular response to amino acid starvation.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:11381086","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"is_a","term_name":"regulation of cellular response to amino acid starvation","termid":"GO:1903832"},{"relation_name":"negatively_regulates","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to amino acid starvation","synonyms":[{"name":"down regulation of cellular response to amino acid starvation","type":"exact"},{"name":"down-regulation of cellular response to amino acid starvation","type":"exact"},{"name":"downregulation of cellular response to amino acid starvation","type":"exact"},{"name":"inhibition of cellular response to amino acid starvation","type":"narrow"}],"termid":"GO:1903574"}


id: GO:0075153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its transmembrane receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transmembrane receptor-mediated signal transduction in response to host (obsolete GO:0075153)","synonyms":[{"name":"regulation of symbiont transmembrane receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075153"}


id: PBO:0054220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1601","termid":"PBO:0054220"}


id: PBO:0085476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable mannosylphosphate transferase; involved in the synthesis of core oligosaccharides in protein glycosylation pathway; facilitates the exit of Mnn4p from the ER via COPII-coated vesicles; member of the KRE2/MNT1 mannosyltransferase family; KTR6 has a paralog, KRE2, that arose from the whole genome duplication","termid":"PBO:0085476"}


id: PR:Q10106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.06","secondary_identifiers":["UniProtKB:Q10106"],"synonyms":[{"name":"Spom972h-UTP11L","type":"exact"},{"name":"U3 snoRNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10106"}


id: PBO:0053429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 374","termid":"PBO:0053429"}


id: SO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine","secondary_identifiers":["RNAMOD:037"],"synonyms":[{"name":"yW","type":"exact"}],"termid":"SO:0001332"}


id: GO:0014906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. This occurs as part of the process of skeletal muscle regeneration. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"myotube differentiation involved in skeletal muscle regeneration","termid":"GO:0014908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myotube cell development involved in skeletal muscle regeneration","termid":"GO:0014906"}


id: PBO:0039735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein D","termid":"PBO:0039735"}


id: PBO:0087550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; part of TauB domain of TFIIIC that binds DNA at BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); colocalizes with condensin at pol III genes and several ETC (extra TFIIIC) sites; may have a role in recruiting or stabilizing Scc2/4 and condensin on chromosomes","termid":"PBO:0087550"}


id: PBO:0029883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_heterochromatin-encoded_proteins","termid":"PBO:0029883"}


id: PBO:0082347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase; involved in the biogenesis of 40S and 60S ribosome subunits; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles","termid":"PBO:0082347"}


id: GO:1990815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site after cytokinesis (obsolete GO:1990815)","termid":"GO:1990815"}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: PBO:0066430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG antisense RNA 1","termid":"PBO:0066430"}


id: PBO:0063204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 overlapping transcript 1","termid":"PBO:0063204"}


id: PBO:0018010
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the ribosomal bL21 domain does not exist on its own","termid":"PBO:0018010"}


id: PATO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000980 absolute porosity value (obsolete PATO:0000980)","termid":"PATO:0000980"}


id: PBO:0066067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RARA antisense RNA 1","termid":"PBO:0066067"}


id: PBO:0030189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_topoisomerase_II_activity","termid":"PBO:0030189"}


id: GO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by a rhodopsin molecule being activated by a photon, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:8823931","PMID:22498302","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"rhodopsin mediated signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating rhodopsin mediated signaling pathway","synonyms":[{"name":"PLC-activating rhodopsin mediated signaling pathway","type":"exact"},{"name":"phospholipase C-activating rhodopsin mediated G-protein coupled receptor signaling pathway","type":"exact"},{"name":"rhodopsin mediated G protein signaling, coupled to IP3 second messenger","type":"exact"},{"name":"rhodopsin mediated G protein signalling, coupled to IP3 second messenger","type":"exact"},{"name":"rhodopsin mediated G-protein signaling, coupled to IP3 second messenger","type":"exact"},{"name":"rhodopsin mediated G-protein signalling, coupled to IP3 second messenger","type":"exact"}],"termid":"GO:0030265"}


id: PBO:0062106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 4 pseudogene","termid":"PBO:0062106"}


id: PBO:0068669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 50, pseudogene","termid":"PBO:0068669"}


id: FYPO:0004400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5823.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on KT5823","synonyms":[{"name":"normal cell population growth in presence of KT5823","type":"exact"},{"name":"normal cell population growth on KT5823","type":"exact"},{"name":"normal cellular response to KT5823","type":"related"},{"name":"normal vegetative cell population growth on KT5823","type":"exact"}],"termid":"FYPO:0004400"}


id: PBO:0029765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_double-strand_break_site","termid":"PBO:0029765"}


id: GO:0072522
data:
  {"annotated_genes":["SJAG_01814","SJAG_02364","SJAG_00915","SJAG_00836","SJAG_00106","SJAG_01126","SJAG_00542","SJAG_03731","SJAG_01139","SJAG_03313","SJAG_04627","SJAG_02850","SJAG_07003","SJAG_04156","SJAG_00985","SJAG_04422","SJAG_04634","SJAG_MIT15","SJAG_02741","SJAG_03290","SJAG_04970","SJAG_03096","SJAG_00044","SJAG_02618","SJAG_00866","SJAG_04123","SJAG_02598","SJAG_03140","SJAG_03298","SJAG_01661","SJAG_02105","SJAG_04681","SJAG_MIT37","SJAG_02564","SJAG_03114","SJAG_06634","SJAG_00438","SJAG_00982","SJAG_04007","SJAG_02887","SJAG_00957","SJAG_02290","SJAG_01070","SJAG_05204","SJAG_04288","SJAG_04693","SJAG_01298","SJAG_01500","SJAG_01402","SJAG_01359","SJAG_00133","SJAG_04122","SJAG_03355","SJAG_00427","SJAG_01859","SJAG_03946","SJAG_03925","SJAG_02158","SJAG_MIT09","SJAG_02006","SJAG_00964","SJAG_01582","SJAG_03881","SJAG_01081","SJAG_01566","SJAG_04882","SJAG_03064","SJAG_02038","SJAG_00084","SJAG_01471","SJAG_02889","SJAG_03811","SJAG_05277","SJAG_00134","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75946,77575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[71399,106717,76022,99717,95757,93956,111150,70135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[85909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050428"},{"annotations":[89283,94539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[95216,72469,74060,83223,73024,77803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[96886,70699,106830,114059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[73468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[84724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[113550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[94282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[73469,113551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[78751,77385,85248,71509,71169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[74039,104705,59226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[74810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[74197,96273,98497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[74811,98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[70063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[103874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[70921,109689,86979,86551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[74175,76410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[78441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[78421,71098,76869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[67428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[104229,89307,99993,104325,112531,89915,115786,84989,88877,105227,99314,115777,99964,115782,101339,90912,98068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[111151,93958,104781,108969,70508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[93860,73381,101130,72220,108970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[85654,72912,89580,89806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[114715],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[74812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine-containing compound, i.e. any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"cellular nitrogen compound biosynthetic process","termid":"GO:0044271"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00084":null,"SJAG_00106":null,"SJAG_00133":null,"SJAG_00134":null,"SJAG_00427":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00957":null,"SJAG_00964":null,"SJAG_00982":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01126":null,"SJAG_01139":null,"SJAG_01298":null,"SJAG_01359":null,"SJAG_01402":null,"SJAG_01471":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02006":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02290":null,"SJAG_02364":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02618":null,"SJAG_02741":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_02889":null,"SJAG_03064":null,"SJAG_03096":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03290":null,"SJAG_03298":null,"SJAG_03313":null,"SJAG_03355":null,"SJAG_03731":null,"SJAG_03811":null,"SJAG_03881":null,"SJAG_03925":null,"SJAG_03946":null,"SJAG_04007":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04288":null,"SJAG_04422":null,"SJAG_04627":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04693":null,"SJAG_04849":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_05204":null,"SJAG_05277":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"purine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine and derivative biosynthetic process","type":"exact"},{"name":"purine-containing compound anabolism","type":"exact"},{"name":"purine-containing compound biosynthesis","type":"exact"},{"name":"purine-containing compound formation","type":"exact"},{"name":"purine-containing compound synthesis","type":"exact"}],"termid":"GO:0072522","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006164":null,"GO:0006166":null,"GO:0006168":null,"GO:0006169":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006190":null,"GO:0006741":null,"GO:0009113":null,"GO:0009435":null,"GO:0015937":null,"GO:0015986":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0034356":null,"GO:0035338":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:0046084":null,"GO:0046086":null,"GO:0050428":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: PBO:0079184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 13, pseudogene","termid":"PBO:0079184"}


id: PBO:0018242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med13","termid":"PBO:0018242"}


id: PBO:0067614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 786, pseudogene","termid":"PBO:0067614"}


id: PR:Q10233
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00937","PANTHER:PTHR20856:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.08c","secondary_identifiers":["UniProtKB:Q10233"],"synonyms":[{"name":"C128 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase III 130 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC130 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3B","type":"exact"}],"termid":"PR:Q10233"}


id: PBO:0063020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase","termid":"PBO:0063020"}


id: PBO:0086340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudogenic fragment with similarity to flocculins; YHR213W has a paralog, YAR062W, that arose from a segmental duplication","termid":"PBO:0086340"}


id: PR:Q9Y7I4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01102","PANTHER:PTHR12646:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.06c","secondary_identifiers":["UniProtKB:Q9Y7I4"],"synonyms":[{"name":"Dol-P-Man-dependent alpha(1-3)-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG3","type":"exact"},{"name":"asparagine-linked glycosylation protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7I4"}


id: PBO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 19","termid":"PBO:0080046"}


id: PBO:0030441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA-Asp_C48,_C49,_C60,_C61_and_C62_methylation","termid":"PBO:0030441"}


id: GO:1903746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode pharyngeal pumping.","definition_xrefs":["GOC:kmv","PMID:25329901","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"},{"relation_name":"is_a","term_name":"positive regulation of eating behavior","termid":"GO:1904000"},{"relation_name":"positively_regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode pharyngeal pumping","synonyms":[{"name":"activation of pharyngeal pumping","type":"narrow"},{"name":"activation of pumping behavior","type":"related"},{"name":"positive regulation of pumping behavior","type":"related"},{"name":"up regulation of pharyngeal pumping","type":"exact"},{"name":"up regulation of pumping behavior","type":"related"},{"name":"up-regulation of pharyngeal pumping","type":"exact"},{"name":"up-regulation of pumping behavior","type":"related"},{"name":"upregulation of pharyngeal pumping","type":"exact"},{"name":"upregulation of pumping behavior","type":"related"}],"termid":"GO:1903746"}


id: PBO:0092006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Serine (gcu), mitochondrial","termid":"PBO:0092006"}


id: PBO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEven Binding","termid":"PBO:0000689"}


id: GO:1905488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GOC:TermGenie","PMID:16516839","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"positively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior/posterior axon guidance","synonyms":[{"name":"activation of anterior-posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon guidance","type":"narrow"},{"name":"activation of anterior/posterior axon pathfinding","type":"narrow"},{"name":"positive regulation of anterior-posterior axon guidance","type":"exact"},{"name":"positive regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"up-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"up-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"upregulation of anterior-posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon guidance","type":"exact"},{"name":"upregulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905488"}


id: PBO:0067951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 253","termid":"PBO:0067951"}


id: PBO:0063731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHACTR3 antisense RNA 1","termid":"PBO:0063731"}


id: GO:0106316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammonium hydroxide + 3 NAD+ + H2O = nitrite + 3 NADH + 3 H+.","definition_xrefs":["RHEA:24628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite reductase activity","termid":"GO:0098809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitrite reductase NADH activity","secondary_identifiers":["EC:1.7.1.15"],"termid":"GO:0106316"}


id: PBO:0082849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper chaperone for superoxide dismutase Sod1p; involved in oxidative stress protection; Met-X-Cys-X2-Cys motif within N-terminus is involved in insertion of copper into Sod1p under conditions of copper deprivation; required for regulation of yeast copper genes in response to DNA-damaging agents; protein abundance increases in response to DNA replication stress; human homolog CCS can complement yeast ccs1 null mutant","termid":"PBO:0082849"}


id: PBO:0081956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 3","termid":"PBO:0081956"}


id: GO:0101010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing pulmonary blood vessels.","definition_xrefs":["GOC:mec"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary blood vessel remodeling","synonyms":[{"name":"pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:0101010"}


id: PBO:0053924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1221","termid":"PBO:0053924"}


id: FYPO:0005991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex of the cell tip during karyogamy involved in conjugation with cellular fusion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex of cell tip","termid":"FYPO:0006876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell cortex of cell tip during karyogamy","synonyms":[{"name":"normal protein localisation to cell cortex of cell tip during karyogamy","type":"exact"},{"name":"normal protein localization to cell cortex of cell tip during karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"normal protein localization to cell cortex of cell tip during nuclear fusion during mating","type":"exact"},{"name":"normal protein localization to cell tip cortex during karyogamy","type":"exact"}],"termid":"FYPO:0005991"}


id: GO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation","termid":"GO:0048762"}


id: PBO:0080714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing, antisense to TP73","termid":"PBO:0080714"}


id: PBO:0070646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 17","termid":"PBO:0070646"}


id: SO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An STS map is a physical map organized by the unique STS landmarks.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS_map","synonyms":[{"name":"STS map","type":"exact"}],"termid":"SO:0001251"}


id: PBO:0054336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1729","termid":"PBO:0054336"}


id: PBO:0090913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fcf2","termid":"PBO:0090913"}


id: GO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GPR37/endothelin B-like receptor activity (obsolete GO:0001606)","synonyms":[{"name":"GPR37/endothelin B-like receptor activity","type":"exact"}],"termid":"GO:0001606"}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: PBO:0029514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_septated_vegetative_cell","termid":"PBO:0029514"}


id: GO:1903684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of border follicle cell migration.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:18394891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"border follicle cell migration","termid":"GO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of border follicle cell migration","synonyms":[{"name":"regulation of border cell migration","type":"broad"}],"termid":"GO:1903684"}


id: PBO:0052603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 pseudogene 1","termid":"PBO:0052603"}


id: PBO:0075385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp1 transcription factor","termid":"PBO:0075385"}


id: PBO:0069125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 375, pseudogene","termid":"PBO:0069125"}


id: PBO:0090066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP binding protein Sgt1","termid":"PBO:0090066"}


id: PBO:0044272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 12","termid":"PBO:0044272"}


id: GO:0072286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric connecting tubule over time, from its formation to the mature structure. The metanephric connecting tubule is a tubular segment of the metanephric nephron; it connects the distal convoluted tubule to the collecting duct in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric connecting tubule development","synonyms":[{"name":"metanephric connecting duct development","type":"exact"}],"termid":"GO:0072286"}


id: PBO:0066604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1 pseudogene 3","termid":"PBO:0066604"}


id: SO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_oligo","synonyms":[{"name":"double stranded oligonucleotide","type":"exact"},{"name":"ds oligo","type":"exact"},{"name":"ds-oligonucleotide","type":"exact"}],"termid":"SO:0000442"}


id: PBO:0063862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 1","termid":"PBO:0063862"}


id: PBO:0064042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 76","termid":"PBO:0064042"}


id: PBO:0066166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 3","termid":"PBO:0066166"}


id: SO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature amplification of a region containing a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_amplification","termid":"SO:0001891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_amplification","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"TFBS amplification ","type":"exact"},{"name":"VEP:TFBS_amplification","type":"exact"},{"name":"transcription factor binding site amplification","type":"exact"}],"termid":"SO:0001892"}


id: PATO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has extra parts of type","secondary_identifiers":["PATO:0001560"],"synonyms":[{"name":"has extra parts of","type":"exact"},{"name":"has increased number of","type":"exact"},{"name":"having extra physical parts","type":"exact"},{"name":"having supernumerary physical parts","type":"exact"},{"name":"increased number of","type":"exact"}],"termid":"PATO:0002002"}


id: PBO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin, Sgo1","termid":"PBO:0003409"}


id: PBO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 1","termid":"PBO:0045127"}


id: GO:1903691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GO_REF:0000058","PMID:18394891","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"positively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"activation of wound healing, spreading of epidermal cells","type":"narrow"},{"name":"up regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"up-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"upregulation of wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:1903691"}


id: PBO:0063004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b regulatory subunit 1 pseudogene 1","termid":"PBO:0063004"}


id: GO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["PMID:1402651","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}


id: GO:0009754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a jasmonic acid stimulus is received by a cell and converted into a molecular signal. Series of events required for a jasmonic acid stimulus to be detected and converted to a signal molecule.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"detection of endogenous stimulus","termid":"GO:0009726"},{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of jasmonic acid stimulus","synonyms":[{"name":"perception of jasmonic acid stimulus","type":"related"}],"termid":"GO:0009754"}


id: PBO:0082896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin for the Sgv1p (Bur1p) protein kinase; subunit of the CDK-cyclin BUR kinase complex with Sgv1p (Bur2p); regulates Set2p-dependent H3K36 trimethylation; regulates transcriptional elongation through the phosphorylation of the carboxy-terminal domain (CTD) of Rpo21p; involved in the recruitment of Spt6p to the CTD at the onset of transcription; regulates telomere elongation","termid":"PBO:0082896"}


id: PBO:0062590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 5","termid":"PBO:0062590"}


id: PBO:0030398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030398"}


id: GO:0030140
data:
  {"annotated_genes":["SJAG_04517","SJAG_00430","SJAG_00379","SJAG_00669","SJAG_04565","SJAG_02240","SJAG_00916","SJAG_01809","SJAG_04609","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96389,97073],"is_not":false,"summary":null,"term":"GO:0030140"},{"annotations":[76652,97363,109591,109348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[90961,109472],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[71955,76349],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"}]},"cv_name":"cellular_component","definition":"A vesicle that mediates transport between the trans-Golgi network and other parts of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi-associated vesicle","termid":"GO:0005798"},{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_00430":null,"SJAG_00669":null,"SJAG_00916":null,"SJAG_01809":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TGN transport vesicle","type":"exact"},{"name":"trans-Golgi network constitutive secretory pathway transport vesicle","type":"exact"}],"termid":"GO:0030140","terms_by_termid":{"GO:0030121":null,"GO:0030130":null,"GO:0030140":null,"GO:0034044":null}}


id: GO:1903428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reactive oxygen species biosynthetic process.","definition_xrefs":["PMID:24252804","GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species biosynthetic process","termid":"GO:1903426"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of reactive oxygen species biosynthetic process","synonyms":[{"name":"activation of ROS formation","type":"related"},{"name":"activation of ROS generation","type":"related"},{"name":"activation of reactive oxygen species anabolism","type":"narrow"},{"name":"activation of reactive oxygen species biosynthesis","type":"narrow"},{"name":"activation of reactive oxygen species biosynthetic process","type":"narrow"},{"name":"activation of reactive oxygen species formation","type":"narrow"},{"name":"activation of reactive oxygen species generation","type":"related"},{"name":"activation of reactive oxygen species synthesis","type":"narrow"},{"name":"positive regulation of ROS formation","type":"related"},{"name":"positive regulation of ROS generation","type":"related"},{"name":"positive regulation of reactive oxygen species anabolism","type":"exact"},{"name":"positive regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"positive regulation of reactive oxygen species formation","type":"exact"},{"name":"positive regulation of reactive oxygen species generation","type":"related"},{"name":"positive regulation of reactive oxygen species synthesis","type":"exact"},{"name":"up regulation of ROS formation","type":"related"},{"name":"up regulation of ROS generation","type":"related"},{"name":"up regulation of reactive oxygen species anabolism","type":"exact"},{"name":"up regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"up regulation of reactive oxygen species biosynthetic process","type":"exact"},{"name":"up regulation of reactive oxygen species formation","type":"exact"},{"name":"up regulation of reactive oxygen species generation","type":"related"},{"name":"up regulation of reactive oxygen species synthesis","type":"exact"},{"name":"up-regulation of ROS formation","type":"related"},{"name":"up-regulation of ROS generation","type":"related"},{"name":"up-regulation of reactive oxygen species anabolism","type":"exact"},{"name":"up-regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"up-regulation of reactive oxygen species biosynthetic process","type":"exact"},{"name":"up-regulation of reactive oxygen species formation","type":"exact"},{"name":"up-regulation of reactive oxygen species generation","type":"related"},{"name":"up-regulation of reactive oxygen species synthesis","type":"exact"},{"name":"upregulation of ROS formation","type":"related"},{"name":"upregulation of ROS generation","type":"related"},{"name":"upregulation of reactive oxygen species anabolism","type":"exact"},{"name":"upregulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"upregulation of reactive oxygen species biosynthetic process","type":"exact"},{"name":"upregulation of reactive oxygen species formation","type":"exact"},{"name":"upregulation of reactive oxygen species generation","type":"related"},{"name":"upregulation of reactive oxygen species synthesis","type":"exact"}],"termid":"GO:1903428"}


id: GO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G1 DNA damage checkpoint (obsolete GO:0072430)","synonyms":[{"name":"detection of DNA damage stimulus involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072430"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: PBO:0082657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; involved intranscription initiation and elongation and in mRNA degradation; conserved lysine in human homolog of Not5p and Not3p is mutated in cancers","termid":"PBO:0082657"}


id: GO:0102240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + soyasapogenol B 3-O-beta-glucuronate = H+ + UDP + soyasaponin III.","definition_xrefs":["EC:2.4.1.272","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"soyasapogenol B glucuronide galactosyltransferase activity","secondary_identifiers":["RHEA:31487","MetaCyc:RXN-12319"],"termid":"GO:0102240"}


id: PBO:0071578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 7","termid":"PBO:0071578"}


id: FYPO:0005778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of one or more chromosomes is abnormal during a cellular response to acetaldehyde.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0001320","FYPO:0000707","FYPO:0000661","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome morphology during cellular response to acetaldehyde","synonyms":[{"name":"abnormal chromosome morphology during cellular response to acetaldehyde during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology during cellular response to acetaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0005778"}


id: GO:0140633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a CARD8 inflammasome complex.","definition_xrefs":["PMID:33420028","PMID:33420033","PMID:33542150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0023052","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"CARD8 inflammasome complex assembly","termid":"GO:0140633"}


id: PBO:0050481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A10","termid":"PBO:0050481"}


id: PBO:0079868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk like zinc finger","termid":"PBO:0079868"}


id: PATO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed transversely.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transverse orientation","synonyms":[{"name":"transversely oriented","type":"exact"}],"termid":"PATO:0002502"}


id: FYECO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TOP-53 (a drug that targets topoisomerase II) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ TOP-53","termid":"FYECO:0000313"}


id: PBO:0026793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_spheroid_vegetative_cell","termid":"PBO:0026793"}


id: PBO:0043360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 2","termid":"PBO:0043360"}


id: PATO:0025001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potability","termid":"PATO:0025000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-potable","synonyms":[{"name":"undrinkable","type":"exact"}],"termid":"PATO:0025001"}


id: PBO:0039641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AOX3P-AOX2P readthrough, transcribed pseudogene","termid":"PBO:0039641"}


id: PBO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein M pseudogene 2","termid":"PBO:0050441"}


id: PBO:0071638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 2","termid":"PBO:0071638"}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: PBO:0057926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3651","termid":"PBO:0057926"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: PBO:0058664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6792","termid":"PBO:0058664"}


id: PBO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2514","termid":"PBO:0055096"}


id: PBO:0088682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85b","termid":"PBO:0088682"}


id: FYPO:0004255
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus, is elongated, and is inviable.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"elongated mononucleate vegetative cell","termid":"FYPO:0001916"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable elongated mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate vegetative cell","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0004255","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0052584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 2","termid":"PBO:0052584"}


id: GO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-21 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-21 production","termid":"GO:0032665"},{"relation_name":"positively_regulates","term_name":"interleukin-21 production","termid":"GO:0032625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-21 production","secondary_identifiers":["GO:0045392"],"synonyms":[{"name":"activation of interleukin-21 production","type":"narrow"},{"name":"positive regulation of IL-21 production","type":"exact"},{"name":"positive regulation of interleukin-21 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-21 production","type":"narrow"},{"name":"up regulation of interleukin-21 production","type":"exact"},{"name":"up-regulation of interleukin-21 production","type":"exact"},{"name":"upregulation of interleukin-21 production","type":"exact"}],"termid":"GO:0032745"}


id: PBO:0004848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase Trr1","termid":"PBO:0004848"}


id: GO:0018703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenoxyacetic acid + H+ + 2 e- = Cl- + 4-chlorophenoxyacetate.","definition_xrefs":["UM-BBD_reactionID:r0280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetate dehalogenase activity","termid":"GO:0018703"}


id: FYPO:0000608
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"abnormal cell cycle arrest in mitotic M phase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","type":"related"},{"name":"abnormal mitotic nuclear division arrest","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase","type":"exact"},{"name":"mitotic cell cycle progression in M phase: arrested","type":"related"}],"termid":"FYPO:0000608","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PBO:0042193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3","termid":"PBO:0042193"}


id: PBO:0073698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 3","termid":"PBO:0073698"}


id: GO:0030776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline = S-adenosyl-L-homocysteine + N-methyl-(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline.","definition_xrefs":["EC:2.1.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.115-RXN","RHEA:13005"],"synonyms":[{"name":"(RS)-tetrahydrobenzylisoquinoline N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity","type":"related"},{"name":"norreticuline N-methyltransferase activity","type":"related"}],"termid":"GO:0030776"}


id: PBO:0091627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pdc2-Repressed lncRNA","termid":"PBO:0091627"}


id: PBO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase Pdi2","termid":"PBO:0015226"}


id: PR:Q09914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.04","synonyms":[{"name":"Spom972h-rho1","type":"exact"}],"termid":"PR:Q09914"}


id: GO:0015358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amino acid/choline transmembrane transporter activity (obsolete GO:0015358)","synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"exact"}],"termid":"GO:0015358"}


id: PBO:0081118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 6 pseudogene 1","termid":"PBO:0081118"}


id: PBO:0085992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for survival upon exposure to K1 killer toxin","termid":"PBO:0085992"}


id: PBO:0091542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho842","termid":"PBO:0091542"}


id: PBO:0005738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIa (predicted)","termid":"PBO:0005738"}


id: PBO:0044986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 37","termid":"PBO:0044986"}


id: PBO:0026771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_import","termid":"PBO:0026771"}


id: PBO:0048019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1","termid":"PBO:0048019"}


id: PBO:0059798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 24","termid":"PBO:0059798"}


id: GO:0016108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetraterpenoid metabolic process","synonyms":[{"name":"tetraterpene metabolic process","type":"narrow"},{"name":"tetraterpene metabolism","type":"narrow"},{"name":"tetraterpenoid metabolism","type":"exact"}],"termid":"GO:0016108"}


id: PBO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit gamma","termid":"PBO:0046026"}


id: GO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"positively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-15 production","secondary_identifiers":["GO:0045374"],"synonyms":[{"name":"activation of interleukin-15 production","type":"narrow"},{"name":"positive regulation of IL-15 production","type":"exact"},{"name":"positive regulation of interleukin-15 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-15 production","type":"narrow"},{"name":"up regulation of interleukin-15 production","type":"exact"},{"name":"up-regulation of interleukin-15 production","type":"exact"},{"name":"upregulation of interleukin-15 production","type":"exact"}],"termid":"GO:0032738"}


id: PBO:0059390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S24 pseudogene 1","termid":"PBO:0059390"}


id: PBO:0031809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_START","termid":"PBO:0031809"}


id: PBO:0044368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 1","termid":"PBO:0044368"}


id: PBO:0053541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 545","termid":"PBO:0053541"}


id: GO:0033550
data:
  {"annotated_genes":["SJAG_02013","SJAG_03263","SJAG_02000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71078,87585,91114],"is_not":false,"summary":null,"term":"GO:0033550"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase tyrosine phosphate + H2O = MAP kinase tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0004721","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"MAP kinase tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tyrosine-specific MAP kinase phosphatase activity","type":"exact"}],"termid":"GO:0033550","terms_by_termid":{"GO:0033550":null}}


id: GO:0046893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into an L-cysteinyl diiron subcluster, found in Fe-hydrogenase.","definition_xrefs":["RESID:AA0334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"iron incorporation into hydrogenase diiron subcluster via L-cysteine ligation","termid":"GO:0046893"}


id: PBO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5","termid":"PBO:0045210"}


id: PBO:0063950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINX1 divergent transcript","termid":"PBO:0063950"}


id: GO:0047292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6AS,11AS)-3,6A,9-trihydroxypterocarpan + dimethylallyl-pyrophosphate = glyceollin + diphosphate.","definition_xrefs":["MetaCyc:2.5.1.36-RXN","EC:2.5.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"trihydroxypterocarpan dimethylallyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4509","MetaCyc:RXN-4510"],"synonyms":[{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:trihydroxypterocarpan dimethylallyl transferase activity","type":"related"}],"termid":"GO:0047292"}


id: PBO:0028735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_L-ergothioneine_level_during_vegetative_growth","termid":"PBO:0028735"}


id: GO:0060362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air that is part of the organism's response to external or internal stimuli resulting in flight.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"},{"relation_name":"is_a","term_name":"flight","termid":"GO:0060361"},{"relation_name":"part_of","term_name":"flight behavior","termid":"GO:0007629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight involved in flight behavior","termid":"GO:0060362"}


id: FYPO:0006999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal dynamic protein localization pattern","synonyms":[{"name":"normal dynamic pattern of protein localization","type":"exact"},{"name":"normal dynamic protein localisation pattern","type":"exact"},{"name":"normal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006999"}


id: PBO:0045477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drosha ribonuclease III","termid":"PBO:0045477"}


id: PBO:0086035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in mitochondria; expression is regulated by transcription factors involved in pleiotropic drug resistance, Pdr1p and Yrr1p; not an essential gene; YLR346C has a paralog, YGR035C, that arose from the whole genome duplication","termid":"PBO:0086035"}


id: PBO:0079131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tsukushi, small leucine rich proteoglycan","termid":"PBO:0079131"}


id: GO:0018399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-phenylalanine to form L-4'-bromophenylalanine.","definition_xrefs":["RESID:AA0176"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination to L-4'-bromophenylalanine (obsolete GO:0018399)","termid":"GO:0018399"}


id: GO:0043011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin.","definition_xrefs":["CL:0000782","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"},{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell differentiation","secondary_identifiers":["Wikipedia:Dendritic_cell"],"termid":"GO:0043011"}


id: PR:Q9Y7P4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04417","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein rml2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.15","secondary_identifiers":["UniProtKB:Q9Y7P4"],"synonyms":[{"name":"L2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rplB","type":"exact"}],"termid":"PR:Q9Y7P4"}


id: PATO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's lying or growing on the ground but with erect or rising tips.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostrate","termid":"PATO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decumbent","termid":"PATO:0002343"}


id: GO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a bundle of His cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086057"}


id: GO:0043415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of skeletal muscle regeneration.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"positively_regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle tissue regeneration","synonyms":[{"name":"activation of skeletal muscle regeneration","type":"narrow"},{"name":"stimulation of skeletal muscle regeneration","type":"narrow"},{"name":"up regulation of skeletal muscle regeneration","type":"exact"},{"name":"up-regulation of skeletal muscle regeneration","type":"exact"},{"name":"upregulation of skeletal muscle regeneration","type":"exact"}],"termid":"GO:0043415"}


id: PBO:0088830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Rix1","termid":"PBO:0088830"}


id: PBO:0065081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich membrane anchor 1","termid":"PBO:0065081"}


id: PATO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001182 relative response (obsolete PATO:0001182)","termid":"PATO:0001182"}


id: PBO:0062946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 4","termid":"PBO:0062946"}


id: PR:Q9UUJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.14c","synonyms":[{"name":"Spom972h-mrpl25","type":"exact"}],"termid":"PR:Q9UUJ5"}


id: GO:0043946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0043946)","synonyms":[{"name":"activation of enzyme activity in other organism","type":"narrow"},{"name":"activation of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of catalytic activity in other organism during symbiotic interaction","type":"related"},{"name":"up regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"upregulation of enzyme activity in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0043946"}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: GO:0050077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-maleylpyruvate = 3-fumarylpyruvate.","definition_xrefs":["MetaCyc:MALEYLPYRUVATE-ISOMERASE-RXN","EC:5.2.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"maleylpyruvate isomerase activity","secondary_identifiers":["RHEA:17393"],"synonyms":[{"name":"3-maleylpyruvate cis-trans-isomerase activity","type":"related"}],"termid":"GO:0050077"}


id: PR:O14171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit SPAC4D7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.04c","secondary_identifiers":["UniProtKB:O14171"],"synonyms":[{"name":"Spom972h-uppS","type":"exact"},{"name":"ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14171"}


id: PBO:0057039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130b","termid":"PBO:0057039"}


id: GO:0098854
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection originating from a renal glomerular podocyte and extending to the renal glomerular podocyte foot.","definition_xrefs":["PMID:24309184","PMID:25324828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"podocyte primary projection","synonyms":[{"name":"glomerular visceral epithelial cell primary projection","type":"exact"},{"name":"podocyte major process","type":"exact"},{"name":"primary podocyte process","type":"exact"}],"termid":"GO:0098854"}


id: GO:0017130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of cytosine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"poly(C) RNA binding","synonyms":[{"name":"poly(C) binding","type":"broad"},{"name":"poly(rC) binding","type":"exact"}],"termid":"GO:0017130"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: GO:0014015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gliogenesis","termid":"GO:0014013"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"positively_regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gliogenesis","synonyms":[{"name":"activation of gliogenesis","type":"narrow"},{"name":"stimulation of gliogenesis","type":"narrow"},{"name":"up regulation of gliogenesis","type":"exact"},{"name":"up-regulation of gliogenesis","type":"exact"},{"name":"upregulation of gliogenesis","type":"exact"}],"termid":"GO:0014015"}


id: PBO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_synthase_activity","termid":"PBO:0030039"}


id: GO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking (obsolete GO:0018142)","synonyms":[{"name":"DNA-protein covalent cross-linking","type":"exact"}],"termid":"GO:0018142"}


id: GO:1990000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of amyloid fibrils, insoluble fibrous protein aggregates exhibiting beta sheet structure, from proteins.","definition_xrefs":["GOC:cvs","PMID:29654159","GOC:sj","PMID:21148556","GOC:ppm","PMID:22817896","GOC:jj","PMID:28937655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid fibril formation","synonyms":[{"name":"amyloid fibril assembly","type":"related"},{"name":"amyloid structure assembly","type":"related"},{"name":"amyloid structure formation","type":"related"}],"termid":"GO:1990000"}


id: PBO:0067842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 144","termid":"PBO:0067842"}


id: PBO:0084598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL158W was originally annotated as an independent ORF, but was later demonstrated to be an exon of an adjacent ORF, YKL157W","termid":"PBO:0084598"}


id: FYPO:0006604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased replication fork arrest at tRNA locus","synonyms":[{"name":"decreased replication fork arrest at tRNA genes","type":"exact"},{"name":"decreased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at tRNA locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at tRNA locus","type":"exact"}],"termid":"FYPO:0006604"}


id: GO:0052052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type II secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type II secretion system (obsolete GO:0052052)","termid":"GO:0052052"}


id: FYPO:0005451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one of two different alleles of a gene is lost less frequently than normal after a double-strand break forms nearby.","definition_xrefs":["PomBase:mah","PMID:17724078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased break-induced loss of heterozygosity","synonyms":[{"name":"decreased break-induced loss of heterozygosity during mitotic cell cycle","type":"related"},{"name":"decreased break-induced loss of heterozygosity during vegetative growth","type":"exact"},{"name":"reduced break-induced loss of heterozygosity","type":"exact"}],"termid":"FYPO:0005451"}


id: GO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 trimethylation (obsolete GO:0036124)","termid":"GO:0036124"}


id: PR:O59812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zwf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase C794.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.01c","synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-zwf2","type":"exact"}],"termid":"PR:O59812"}


id: PBO:0086510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains","termid":"PBO:0086510"}


id: GO:0052843
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101542,111708],"is_not":false,"summary":null,"term":"GO:0052843"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate + phosphate + 2 H+.","definition_xrefs":["PMID:11502751","PMID:26422458","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol diphosphate pentakisphosphate diphosphatase activity","termid":"GO:0052842"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10977","GO:0101011"],"synonyms":[{"name":"inositol 1-diphosphate 2,3,4,5,6-pentakisphosphate 1-diphosphatase activity","type":"exact"},{"name":"inositol 1-pyrophosphate 2,3,4,5,6-pentakisphosphate 1-pyrophosphatase activity","type":"exact"}],"termid":"GO:0052843","terms_by_termid":{"GO:0052843":null}}


id: GO:0072735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tert-butyl hydroperoxide (t-BOOH) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkyl hydroperoxide","termid":"GO:0033195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tert-butyl hydroperoxide","synonyms":[{"name":"response to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"response to t-BOOH","type":"exact"}],"termid":"GO:0072735"}


id: PBO:0044830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 117 (pseudogene)","termid":"PBO:0044830"}


id: GO:0031310
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the vacuolar membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of vacuolar membrane (obsolete GO:0031310)","synonyms":[{"name":"intrinsic to vacuolar membrane","type":"narrow"}],"termid":"GO:0031310"}


id: GO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,5,7,3',4'-pentahydroxyflavone = S-adenosyl-L-homocysteine + 3-methoxy-5,7,3',4'-tetrahydroxy-flavone.","definition_xrefs":["EC:2.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"quercetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:QUERCETIN-3-O-METHYLTRANSFERASE-RXN","RHEA:17673"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,5,7,3',4'-pentahydroxyflavone 3-O-methyltransferase activity","type":"related"},{"name":"flavonoid 3-methyltransferase activity","type":"related"},{"name":"flavonol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030755"}


id: PBO:0077251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMED2 pseudogene 1","termid":"PBO:0077251"}


id: GO:0097701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress where the fluid is flowing across a solid surface with periodic variations. For example, the endothelium in straight parts of the artery tree is subjected to pulsatile shear stress with a significant forward direction, which is believed to be an important physiological stimulus enhancing vessel compliance and conferring anti-thrombotic, anti-adhesive, and anti-inflammatory effects.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GOC:BHF","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluid shear stress","termid":"GO:0034405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pulsatile fluid shear stress","termid":"GO:0097701"}


id: PBO:0066596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q","termid":"PBO:0066596"}


id: PBO:0070622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 6","termid":"PBO:0070622"}


id: PR:O94462
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein puf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.22c","synonyms":[{"name":"Spom972h-puf3","type":"exact"},{"name":"pumilio homology domain family member 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94462"}


id: SO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense overlap long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA_gene","synonyms":[{"name":"sense overlap lncRNA gene","type":"exact"},{"name":"sense overlap ncRNA gene","type":"exact"},{"name":"sense_overlap_lncRNA_gene","type":"exact"}],"termid":"SO:0002183"}


id: PBO:0038428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,3-galactosyltransferase 2","termid":"PBO:0038428"}


id: PBO:0090394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb2","termid":"PBO:0090394"}


id: PBO:0058328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4701","termid":"PBO:0058328"}


id: PR:P05752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.07c","synonyms":[{"name":"Spom972h-rps601","type":"exact"}],"termid":"PR:P05752"}


id: FYPO:0007558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing econazole.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on econazole","synonyms":[{"name":"normal cell population growth in presence of econazole","type":"exact"},{"name":"normal cell population growth on ECZ","type":"exact"},{"name":"normal cell population growth on econazole","type":"exact"},{"name":"normal cellular response to econazole","type":"related"},{"name":"normal vegetative cell population growth on econazole","type":"exact"}],"termid":"FYPO:0007558"}


id: PBO:0090028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, metallo-beta-lactamase/beta-CASP protein Cft2","termid":"PBO:0090028"}


id: PBO:0065216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1 pseudogene 2","termid":"PBO:0065216"}


id: PBO:0039603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C","termid":"PBO:0039603"}


id: GO:0052792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of xylogalacturonate by cleavage of the alpha-(1,4)-linkage. Xylogalacturonate (XGA) is composed of a chain of alpha-(1,4)-linked D-galacturonic acid residues with beta-D-xylose substituted at the O3 position.","definition_xrefs":["PMID:10618200","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"endo-xylogalacturonan hydrolase activity","synonyms":[{"name":"endo-galacturonase activity","type":"broad"}],"termid":"GO:0052792"}


id: GO:0010397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pectic apiogalacturonan, characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted with apiose and apiobiose (D-apiofuranosyl-beta-(1->3)-D-apiose) side chains via O-2 or O-3 links.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"apiogalacturonan metabolic process","synonyms":[{"name":"apiogalacturonan metabolism","type":"exact"}],"termid":"GO:0010397"}


id: PBO:0045541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 1 like","termid":"PBO:0045541"}


id: PBO:0073688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 1","termid":"PBO:0073688"}


id: PBO:0043147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 15","termid":"PBO:0043147"}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: PBO:0083403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the 5' end of the essential PRP4 gene encoding a component of the U4/U6-U5 snRNP complex","termid":"PBO:0083403"}


id: GO:0044159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure within the host cell that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the host plasma membrane. In eukaryotic host cells they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host thylakoid","termid":"GO:0044159"}


id: PBO:0051342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-23 (pseudogene)","termid":"PBO:0051342"}


id: PBO:0049829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGFL3 pseudogene 1","termid":"PBO:0049829"}


id: GO:1903861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite extension.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:24898855","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of dendrite extension","termid":"GO:1903859"},{"relation_name":"positively_regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite extension","synonyms":[{"name":"activation of dendrite extension","type":"narrow"},{"name":"up regulation of dendrite extension","type":"exact"},{"name":"up-regulation of dendrite extension","type":"exact"},{"name":"upregulation of dendrite extension","type":"exact"}],"termid":"GO:1903861"}


id: GO:0005345
data:
  {"annotated_genes":["SJAG_03777","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015207"},{"annotations":[109108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015208"},{"annotations":[78535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"purine nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine base transmembrane transporter activity","type":"exact"},{"name":"purine transmembrane transporter activity","type":"related"}],"termid":"GO:0005345","terms_by_termid":{"GO:0015207":null,"GO:0015208":null,"GO:0042907":null}}


id: PBO:0085457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potential adenine phosphoribosyltransferase; encodes a protein with similarity to adenine phosphoribosyltransferase, but artificially expressed protein exhibits no enzymatic activity; APT2 has a paralog, APT1, that arose from the whole genome duplication","termid":"PBO:0085457"}


id: PBO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR101","termid":"PBO:0001730"}


id: SO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An snRNA required for the splicing of the minor U12-dependent class of eukaryotic nuclear introns. It forms a base paired complex with U6atac_snRNA (SO:0000397).","definition_xrefs":["PMID:12409455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4atac_snRNA","synonyms":[{"name":"U4atac small nuclear RNA","type":"exact"},{"name":"U4atac snRNA","type":"exact"},{"name":"small nuclear RNA U4atac","type":"exact"},{"name":"snRNA U4atac","type":"exact"}],"termid":"SO:0000394"}


id: PBO:0047254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member B","termid":"PBO:0047254"}


id: GO:1904045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldosterone stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:17644563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to mineralocorticoid stimulus","termid":"GO:0071389"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to aldosterone","termid":"GO:1904044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aldosterone","termid":"GO:1904045"}


id: MOD:00176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["PubMed:179809","Unimod:395#S","PubMed:180526","PubMed:10924139","PubMed:11052675","PubMed:368065","RESID:AA0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","synonyms":[{"name":"MOD_RES O-(phosphoribosyl dephospho-coenzyme A)serine","type":"exact"},{"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-(phosphate-5-ribosyl-alpha-2-adenosine-5-diphosphate pantetheine)-L-serine","type":"exact"},{"name":"O3-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-2'-(5''-phosphoribosyl-3'-dephosphocoenzyme A)-L-serine","type":"exact"},{"name":"OPRibdPCoASer","type":"exact"},{"name":"PhosphoribosyldephosphoCoA","type":"related"},{"name":"phosphoribosyl dephospho-coenzyme A","type":"related"}],"termid":"MOD:00176"}


id: PBO:0001775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Cic1/Utp30 family (predicted)","termid":"PBO:0001775"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: PR:Q9UUD8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18A7.01 gene.","definition_xrefs":["UniProtKB:Q9UUD8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized peptidase C18A7.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18A7.01","synonyms":[{"name":"Spom972h-SPBC18A7.01","type":"exact"}],"termid":"PR:Q9UUD8"}


id: GO:0070801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of conidiophore stalk development, a process that leads to the formation of a conidiophore stalk. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conidiophore development","termid":"GO:0070795"},{"relation_name":"is_a","term_name":"regulation of conidiophore stalk development","termid":"GO:0070799"},{"relation_name":"positively_regulates","term_name":"conidiophore stalk development","termid":"GO:0070788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidiophore stalk development","termid":"GO:0070801"}


id: GO:0004703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + G protein-coupled receptor = ADP + G protein-coupled receptor phosphate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0140096","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor kinase activity","secondary_identifiers":["RHEA:12008","EC:2.7.11.16","GO:0004678"],"synonyms":[{"name":"ATP:G-protein-coupled receptor phosphotransferase activity","type":"related"},{"name":"G protein coupled receptor phosphorylating protein kinase activity","type":"exact"},{"name":"G-protein coupled receptor kinase activity","type":"related"},{"name":"G-protein-coupled receptor phosphorylating protein kinase activity","type":"exact"},{"name":"GPCR kinase activity","type":"related"},{"name":"GPCR phosphorylating protein kinase activity","type":"exact"},{"name":"GPCRK","type":"related"},{"name":"GRK4","type":"related"},{"name":"GRK5","type":"related"},{"name":"GRK6","type":"related"},{"name":"STK16","type":"related"}],"termid":"GO:0004703"}


id: PBO:0073103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 7","termid":"PBO:0073103"}


id: PR:Q9P6I7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dea2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.02","synonyms":[{"name":"AAH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dea2","type":"exact"},{"name":"adenine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I7"}


id: PBO:0003125
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoclonal antibodies","termid":"PBO:0003125"}


id: GO:0046229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-aminobenzenesulfonate biosynthetic process (obsolete GO:0046229)","synonyms":[{"name":"2-aminobenzenesulfonate anabolism","type":"exact"},{"name":"2-aminobenzenesulfonate biosynthesis","type":"exact"},{"name":"2-aminobenzenesulfonate biosynthetic process","type":"exact"},{"name":"2-aminobenzenesulfonate formation","type":"exact"},{"name":"2-aminobenzenesulfonate synthesis","type":"exact"},{"name":"2-aminobenzenesulphonate biosynthesis","type":"exact"},{"name":"2-aminobenzenesulphonate biosynthetic process","type":"exact"}],"termid":"GO:0046229"}


id: GO:0002753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand from another organism to a cytoplasmic pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:add","PMID:18272355","PMID:19531363","ISBN:0781735149","PMID:15199967","GOC:ar","PMID:17328678","PMID:21187438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cytoplasmic pattern recognition receptor signaling pathway","secondary_identifiers":["GO:0039528"],"synonyms":[{"name":"cytoplasmic PRR signaling pathway","type":"exact"},{"name":"cytoplasmic caspase-recruiting domain (CARD) helicase signaling pathway","type":"narrow"},{"name":"cytoplasmic pathogen receptor signaling pathway","type":"exact"},{"name":"cytoplasmic pattern recognition receptor signalling pathway","type":"exact"},{"name":"cytosolic PAMP receptor signaling pathway","type":"exact"},{"name":"cytosolic pattern recognition receptor signaling pathway","type":"exact"}],"termid":"GO:0002753"}


id: PBO:0080853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 2","termid":"PBO:0080853"}


id: SO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A location where a gene is rearranged due to recombination during mitosis or meiosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_feature_of_rearranged_gene","synonyms":[{"name":"recombination feature of rearranged gene","type":"exact"}],"termid":"SO:0000300"}


id: GO:0015742
data:
  {"annotated_genes":["SJAG_00275","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71425],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[92678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: PBO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily R member 1, pseudogene","termid":"PBO:0062029"}


id: PBO:0057555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR670 host gene","termid":"PBO:0057555"}


id: GO:0015642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts as to cause lysis of bacterial cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriolytic toxin activity (obsolete GO:0015642)","synonyms":[{"name":"bacteriolytic toxin activity","type":"exact"}],"termid":"GO:0015642"}


id: PBO:0088569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3a","termid":"PBO:0088569"}


id: GO:0097118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:12796785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"postsynaptic membrane assembly","termid":"GO:0097104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"neuroligin clustering involved in postsynaptic membrane assembly","synonyms":[{"name":"Nlgn clustering","type":"broad"},{"name":"neuroligin clustering","type":"broad"},{"name":"postsynaptic neuroligin clustering","type":"exact"}],"termid":"GO:0097118"}


id: GO:0070692
data:
  {"annotated_genes":["SJAG_03967","SJAG_02057","SJAG_01149"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77990,91896,107404],"is_not":false,"summary":null,"term":"GO:0070692"}]},"cv_name":"cellular_component","definition":"A positive transcription elongation factor complex that comprises the CDK kinase CTK1 (in budding yeast), Lsk1 (in fission yeast) (corresponding to the Panther PTHR24056:SF39 family), a cyclin and an additional gamma subunit (corresponding to the InterPRO entry IPR024638).","definition_xrefs":["GOC:mah","PMID:16721054","GOC:vw","PMID:19328067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin/CDK positive transcription elongation factor complex","termid":"GO:0008024"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_02057":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CTDK-1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal domain kinase I complex","type":"exact"},{"name":"CTDK-I complex","type":"exact"},{"name":"Ctk complex","type":"exact"},{"name":"trimeric positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0070692","terms_by_termid":{"GO:0070692":null}}


id: PBO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific protein kinase Mug27/Slk1","termid":"PBO:0005592"}


id: PATO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of time that a viviparous organism has given birth.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parity","termid":"PATO:0002370"}


id: PR:Q9P7H9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C105.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.03c","synonyms":[{"name":"Spom972h-SPAC105.03c","type":"exact"}],"termid":"PR:Q9P7H9"}


id: FYPO:0004690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 at the silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004690"}


id: PBO:0035704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Zeocin","termid":"PBO:0035704"}


id: GO:0032797
data:
  {"annotated_genes":["SJAG_03894","SJAG_05195","SJAG_03323","SJAG_01217"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92078,97540,100878,105426],"is_not":false,"summary":null,"term":"GO:0032797"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and Unrip proteins; the complex is found in the cytoplasm and in nuclear Gems, and is involved in spliceosomal snRNP assembly in the cytoplasm and in pre-mRNA splicing in the nucleus.","definition_xrefs":["PMID:17023415","PMID:16434402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01217":null,"SJAG_03323":null,"SJAG_03894":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"SMN complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SMN core complex","type":"exact"},{"name":"survival motor neuron complex","type":"exact"}],"termid":"GO:0032797","terms_by_termid":{"GO:0032797":null}}


id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: PBO:0067121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 166, pseudogene","termid":"PBO:0067121"}


id: PBO:0070650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 21","termid":"PBO:0070650"}


id: PBO:0048598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone releasing hormone","termid":"PBO:0048598"}


id: PBO:0053693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 891","termid":"PBO:0053693"}


id: PBO:0072865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 3","termid":"PBO:0072865"}


id: PBO:0089931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc15","termid":"PBO:0089931"}


id: PBO:0073874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 2","termid":"PBO:0073874"}


id: GO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of C-23 of any form of vitamin D.","definition_xrefs":["PMID:22100522","PMID:30205156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}


id: GO:0010221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the vernalization response, by which induction of flowering is normally caused by extended exposure to cold temperatures.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vernalization response","termid":"GO:0010219"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"vernalization response","termid":"GO:0010048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vernalization response","synonyms":[{"name":"down regulation of vernalization response","type":"exact"},{"name":"down-regulation of vernalization response","type":"exact"},{"name":"downregulation of vernalization response","type":"exact"},{"name":"inhibition of vernalization response","type":"narrow"}],"termid":"GO:0010221"}


id: PBO:0076723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional and immune response regulator","termid":"PBO:0076723"}


id: GO:1900322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of maltotetraose transport","termid":"GO:1900321"},{"relation_name":"negatively_regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maltotetraose transport","synonyms":[{"name":"down regulation of maltotetraose transport","type":"exact"},{"name":"down-regulation of maltotetraose transport","type":"exact"},{"name":"downregulation of maltotetraose transport","type":"exact"},{"name":"inhibition of maltotetraose transport","type":"narrow"}],"termid":"GO:1900322"}


id: PBO:0090449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [acyl-carrier protein] S-malonyltransferase Mct1","termid":"PBO:0090449"}


id: PBO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisA","termid":"PBO:0013076"}


id: PBO:0053014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1","termid":"PBO:0053014"}


id: PBO:0014312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0014312"}


id: GO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-glycosidic bonds in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"RNA glycosylase activity","termid":"GO:0030597"}


id: FYPO:0005449
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"},{"annotations":[116306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[115834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[116243,116260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115811,115812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"},{"annotations":[115900,116283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"},{"annotations":[115831,115823,115824,115835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115933,115941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01330":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_02252":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03143":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03892":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04551":null},"genotype_count":11,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_02392","SJAG_00028","SJAG_01143","SJAG_01050","SJAG_04522"],"name":"abolished cellular process","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_02252","SJAG_03143","SJAG_02592","SJAG_00610","SJAG_00514","SJAG_01330","SJAG_01143","SJAG_04551"],"single_locus_genotype_uniquenames":["sep1delta","scd1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","mad2delta","mid1delta","sty1delta","pck2delta","ace2delta"],"synonyms":[{"name":"cellular process abolished","type":"exact"}],"termid":"FYPO:0005449","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYPO:0001132":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002998":null,"FYPO:0004105":null,"FYPO:0004318":null,"FYPO:0006557":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0160155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The autophagic process which involves the direct fusion of abnormal, excess or obsolete secretory granules with lysosomes. This pathway is often associated with maintaining homeostasis in endocrine and exocrine cells.","definition_xrefs":["PMID:35452619","PMID:29066608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"crinophagy","termid":"GO:0160155"}


