# terms

id: GO:0003421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the columnar cartilage along the axis of a long bone that contributes to bone growth.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage axis specification","synonyms":[{"name":"growth plate cartilage axis determination","type":"related"}],"termid":"GO:0003421"}


id: PBO:0064224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 1","termid":"PBO:0064224"}


id: PBO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 6","termid":"PBO:0051096"}


id: PBO:0028507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_splicing_at_cryptic_splice_sites","termid":"PBO:0028507"}


id: PBO:0066273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member G, pseudogene","termid":"PBO:0066273"}


id: FYECO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing trehalose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose MM","synonyms":[{"name":"trehalose minimal medium","type":"exact"}],"termid":"FYECO:0000146"}


id: GO:0070347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brown fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"brown fat cell proliferation","termid":"GO:0070342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of brown fat cell proliferation","synonyms":[{"name":"regulation of brown adipocyte proliferation","type":"exact"},{"name":"regulation of brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070347"}


id: PBO:0077459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184B","termid":"PBO:0077459"}


id: PBO:0076088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3A antisense RNA 1","termid":"PBO:0076088"}


id: MOD:00182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to L-bromohistidine.","definition_xrefs":["PubMed:9033387","Unimod:340#H","PubMed:2076468","RESID:AA0173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-bromohistidine","synonyms":[{"name":"Br1His","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-bromohistidine","type":"exact"},{"name":"MOD_RES Bromohistidine","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00182"}


id: GO:0045094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to beta subunit of interleukin-18. IL-18b is a ligand non-binding chain and is required for signaling of IL-18 that binds with IL-18a.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 beta subunit binding (obsolete GO:0045094)","synonyms":[{"name":"IL-18Rb binding","type":"exact"}],"termid":"GO:0045094"}


id: GO:2000315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0045743"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"positive regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000315"}


id: PBO:0086458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; null mutant exhibits longer telomeres, altered Ty mobility, decreased resistance to rapamycin and wortmannin; induced in response to hydrostatic pressure; not an essential gene; YBR284W has a paralog, YJL070C, that arose from the whole genome duplication","termid":"PBO:0086458"}


id: PBO:0075549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 1","termid":"PBO:0075549"}


id: GO:0050083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-3-carboxy-3-hydroxypropanoyl-CoA = acetyl-CoA + glyoxylate.","definition_xrefs":["MetaCyc:MALYL-COA-LYASE-RXN","EC:4.1.3.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"malyl-CoA lyase activity","secondary_identifiers":["RHEA:16629"],"synonyms":[{"name":"(3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-3-carboxy-3-hydroxypropanoyl-CoA glyoxylate-lyase activity","type":"related"},{"name":"malyl-coenzyme A lyase activity","type":"related"}],"termid":"GO:0050083"}


id: PBO:0057977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3692","termid":"PBO:0057977"}


id: PBO:0074137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A2","termid":"PBO:0074137"}


id: PBO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031026"}


id: GO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase kinase (MAPKKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKKK activity (obsolete GO:0051390)","synonyms":[{"name":"inactivation of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase kinase activity","type":"exact"},{"name":"termination of MAPKKK activity","type":"exact"}],"termid":"GO:0051390"}


id: PBO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 1","termid":"PBO:0050877"}


id: MOD:00687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and either an alkyl C as in lanthionine, or an aryl C as 2'-(S-cysteinyl)-L-histidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioether crosslinked residues","termid":"MOD:00687"}


id: GO:2000812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of barbed-end actin filament capping","synonyms":[{"name":"regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"regulation of barbed-end actin capping activity","type":"exact"},{"name":"regulation of plus-end F-actin capping activity","type":"exact"},{"name":"regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000812"}


id: PBO:0057433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 551a","termid":"PBO:0057433"}


id: FYPO:0000312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination with normal, septated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, septated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, septated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, septated germ tube morphology","type":"exact"}],"termid":"FYPO:0000312"}


id: PBO:0038272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_deletion_and_mutation","termid":"PBO:0038272"}


id: GO:0102461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + UDP-L-rhamnose = kaempferol 3-O-rhamnosyl(1->2)glucoside-7-O-rhamnoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kaempferol 3-sophoroside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14009"],"termid":"GO:0102461"}


id: GO:0072274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular basement membrane over time, from its formation to the mature structure. The metanephric glomerular basement membrane is the basal laminal portion of the metanephric glomerulus which performs the actual filtration.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular basement membrane development","termid":"GO:0032836"},{"relation_name":"part_of","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular basement membrane development","termid":"GO:0072274"}


id: FYPO:0003108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere","termid":"FYPO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to telomere during vegetative growth","synonyms":[{"name":"abnormal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abnormal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abnormal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003108"}


id: PBO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor Overexpression Elongated","termid":"PBO:0013439"}


id: GO:0034798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen (2R,3S)-3-methyloxiran-2-ylphosphonic acid + L-cysteine = hydrogen (1R,2R)-1-L-cysteine-2-hydroxypropylphosphonic acid.","definition_xrefs":["UM-BBD_reactionID:r1074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"fosfomycin 2-L-cysteine ligase activity","termid":"GO:0034798"}


id: PBO:0066653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 1","termid":"PBO:0066653"}


id: SO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Imprinted genes are epigenetically modified genes that are expressed monoallelically according to their parent of origin.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"},{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_imprinted","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Genomic_imprinting"],"synonyms":[{"name":"genomically imprinted","type":"exact"},{"name":"imprinted","type":"broad"}],"termid":"SO:0000134"}


id: PBO:0069193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 447, pseudogene","termid":"PBO:0069193"}


id: PBO:0085023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nim1p-related protein kinase; septin-binding kinase that localizes to the bud neck septin ring and regulates the morphogenesis checkpoint; phosphorylates Hsl7p and cooperates with Elm1p to recruit Hsl7p to the mother-bud neck, as a prerequisite for the subsequent recruitment, phosphorylation, and degradation of Swe1p; autophosphorylation enhances interactions with Hsl7p","termid":"PBO:0085023"}


id: GO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine = (S)-4,5-dihydroxypentane-2,3-dione + L-homocysteine.","definition_xrefs":["RHEA:17753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-ribosylhomocysteine lyase activity","secondary_identifiers":["GO:0019138","EC:4.4.1.21","KEGG_REACTION:R01291","MetaCyc:RIBOSYLHOMOCYSTEINASE-RXN"],"synonyms":[{"name":"LuxS","type":"related"},{"name":"S-(5-deoxy-D-ribos-5-yl)-L-homocysteine homocysteine-lyase [(4S)-4,5-dihydroxypentan-2,3-dione-forming]","type":"related"},{"name":"S-ribosylhomocysteinase activity","type":"exact"},{"name":"ribosylhomocysteinase activity","type":"exact"}],"termid":"GO:0043768"}


id: MOD:00132
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-lysine residue to release water and form 2-amino-6-(2-amino-2-carboxyethylamino)hexanoic acid.","definition_xrefs":["DeltaMass:0","PubMed:2544544","RESID:AA0123#KSX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys-Ser)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Lysinoalanine (Ser-Lys)","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"Lysinoalanine (from Cysteine)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"XLNK-N6Lys-3Dha(Ser)","type":"exact"},{"name":"alaninolysine","type":"exact"}],"termid":"MOD:00132"}


id: GO:0140460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-negative bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-negative bacterium","termid":"GO:0140460"}


id: PBO:0028692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_doxorubicin","termid":"PBO:0028692"}


id: FYPO:0007639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured at ribosomal DNA in a cell is greater than normal during G0 phase. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at rDNA during G0","synonyms":[{"name":"increased DNA damage at rDNA during cell quiescence","type":"exact"},{"name":"increased DNA damage at rDNA during quiescence","type":"exact"},{"name":"increased DNA damage at ribosomal DNA","type":"exact"}],"termid":"FYPO:0007639"}


id: GO:0018506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxoadipate + NAD(P)+ = 2-maleylacetate + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"maleylacetate reductase activity","secondary_identifiers":["MetaCyc:MALEYLACETATE-REDUCTASE-RXN","UM-BBD_enzymeID:e0063"],"synonyms":[{"name":"3-oxoadipate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"maleolylacetate reductase activity","type":"related"}],"termid":"GO:0018506"}


id: GO:0006390
data:
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id: PBO:0083555
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id: PBO:0012245
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id: PBO:0005901
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id: PBO:0077590
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id: PBO:0030699
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id: PBO:0079740
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id: PBO:0053995
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id: GO:0008757
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id: GO:0004747
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id: PBO:0039709
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id: PR:P17608
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id: FYPO:0005597
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id: PBO:0003545
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id: GO:1990595
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id: FYPO:0006559
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id: PBO:0070621
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id: PATO:0000368
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id: GO:1900094
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id: GO:0007495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of cell-cell signaling between visceral mesoderm cells and endoderm cells that is involved in the differentiation of cells in the midgut.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"visceral mesoderm-endoderm interaction involved in midgut development","synonyms":[{"name":"visceral mesoderm/endoderm interaction","type":"exact"}],"termid":"GO:0007495"}


id: GO:0009198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009198"}


id: PBO:0077428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 165","termid":"PBO:0077428"}


id: GO:0006826
data:
  {"annotated_genes":["SJAG_02457","SJAG_02834","SJAG_02735","SJAG_04737","SJAG_04743","SJAG_02473","SJAG_04675","SJAG_01007","SJAG_02968","SJAG_04867","SJAG_04677","SJAG_04260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110416,94235,70347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[88412,88416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[109361,100112,109817,74914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[85138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[88417,109362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[107273,107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[109363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[107275,107276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"iron ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015682","GO:0033216","GO:0015681","GO:0015684","GO:0097286"],"synonyms":[{"name":"ferric ion import","type":"narrow"},{"name":"ferric ion transport","type":"narrow"},{"name":"ferric iron import","type":"narrow"},{"name":"ferric iron transport","type":"narrow"},{"name":"ferric iron uptake","type":"narrow"},{"name":"ferrous ion transport","type":"narrow"},{"name":"ferrous iron transport","type":"narrow"},{"name":"iron ion import","type":"related"},{"name":"iron transport","type":"exact"}],"termid":"GO:0006826","terms_by_termid":{"GO:0015891":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0044718":null,"GO:0048250":null,"GO:0098711":null,"GO:0140466":null}}


id: PBO:0084292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock","termid":"PBO:0084292"}


id: PBO:0089362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase","termid":"PBO:0089362"}


id: FYPO:0000502
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[115825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle","termid":"FYPO:0000059"},{"relation_name":"is_a","term_name":"abnormally arrested cell cycle progression","termid":"FYPO:0000407"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormally arrested mitotic cell cycle progression","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_04332","SJAG_04284"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta"],"synonyms":[{"name":"abnormal mitotic cell cycle arrest","type":"related"},{"name":"abnormally arrested mitotic cell cycle","type":"exact"},{"name":"abnormally arrested mitotic cell cycle progression during mitotic cell cycle","type":"related"},{"name":"abnormally arrested mitotic cell cycle progression during vegetative growth","type":"exact"},{"name":"mitotic cell cycle abnormally arrested","type":"exact"},{"name":"mitotic cell cycle: arrested","type":"related"}],"termid":"FYPO:0000502","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0080536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 1","termid":"PBO:0080536"}


id: GO:0070064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proline-rich region, i.e. a region that contains a high proportion of proline residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proline-rich region binding","termid":"GO:0070064"}


id: PBO:0061205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnin","termid":"PBO:0061205"}


id: PBO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1","termid":"PBO:0034707"}


id: GO:1903856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:25535363","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytokinin dehydrogenase activity","synonyms":[{"name":"regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903856"}


id: GO:0075316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"negatively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of basidium development","termid":"GO:0075316"}


id: PBO:0063436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 10","termid":"PBO:0063436"}


id: GO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on a neuromedin U receptor.","definition_xrefs":["PMID:10899166","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuromedin U receptor binding","termid":"GO:0042922"}


id: PBO:0061172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 2-1","termid":"PBO:0061172"}


id: GO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + glycine = L-ornithine + guanidinoacetate.","definition_xrefs":["RHEA:13201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidinotransferase activity","termid":"GO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycine amidinotransferase activity","secondary_identifiers":["EC:2.1.4.1","MetaCyc:GLYCINE-AMIDINOTRANSFERASE-RXN","Reactome:R-HSA-71275"],"synonyms":[{"name":"L-arginine:glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine transamidinase activity","type":"related"},{"name":"glycine transamidinase activity","type":"related"}],"termid":"GO:0015068"}


id: GO:1904906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","GOC:bc","GOC:BHF","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"positively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"activation of endothelial cell-matrix adhesion via fibronectin","type":"narrow"},{"name":"up regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"up-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"upregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"}],"termid":"GO:1904906"}


id: FYPO:0005980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is decreased.","definition_xrefs":["PomBase:mah","PMID:27075176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament bundle assembly","termid":"FYPO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"decreased actin filament bundle assembly","synonyms":[{"name":"actin bundling decreased","type":"exact"},{"name":"decreased actin bundling","type":"exact"},{"name":"decreased actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"decreased actin filament bundle assembly during vegetative growth","type":"exact"},{"name":"reduced filament bundle assembly","type":"exact"}],"termid":"FYPO:0005980"}


id: GO:0099159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of synaptic structure","termid":"GO:1905244"},{"relation_name":"regulates","term_name":"modification of postsynaptic structure","termid":"GO:0099010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic structure","synonyms":[{"name":"regulation of postsynapse remodelling","type":"exact"}],"termid":"GO:0099159"}


id: PBO:0059309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51","termid":"PBO:0059309"}


id: FYPO:0004151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular pyridoxine level","synonyms":[{"name":"decreased cellular pyridoxine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pyridoxine level during vegetative growth","type":"exact"},{"name":"decreased pyridoxine accumulation","type":"related"},{"name":"reduced cellular pyridoxine level","type":"exact"}],"termid":"FYPO:0004151"}


id: FYPO:0003375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal ubiquinone binding","synonyms":[{"name":"normal coenzyme Q binding","type":"exact"}],"termid":"FYPO:0003375"}


id: GO:1903839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:als","PMID:19575011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA binding","termid":"GO:1902416"},{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA 3'-UTR binding","synonyms":[{"name":"activation of mRNA 3' UTR binding","type":"narrow"},{"name":"activation of mRNA 3'-UTR binding","type":"narrow"},{"name":"positive regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"upregulation of mRNA 3' UTR binding","type":"exact"},{"name":"upregulation of mRNA 3'-UTR binding","type":"exact"}],"termid":"GO:1903839"}


id: PBO:0073332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 7 pseudogene 1","termid":"PBO:0073332"}


id: GO:0004106
data:
  {"annotated_genes":["SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74351],"is_not":false,"summary":null,"term":"GO:0004106"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = prephenate.","definition_xrefs":["EC:5.4.99.5","RHEA:13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"chorismate mutase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:CHORISMATEMUT-RXN","KEGG_REACTION:R01715"],"synonyms":[{"name":"chorismate pyruvatemutase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"}],"termid":"GO:0004106","terms_by_termid":{"GO:0004106":null}}


id: GO:1901402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole metabolic process","synonyms":[{"name":"down regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down regulation of tetrapyrrole metabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"down-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"downregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"downregulation of tetrapyrrole metabolism","type":"exact"},{"name":"inhibition of tetrapyrrole metabolic process","type":"narrow"},{"name":"inhibition of tetrapyrrole metabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901402"}


id: FYPO:0006587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PMID:29134248","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to shmoo tip membrane","synonyms":[{"name":"decreased protein localisation to shmoo tip membrane","type":"exact"},{"name":"decreased protein localization to mating projection tip membrane","type":"exact"},{"name":"decreased protein localization to plasma membrane at shmoo tip","type":"exact"},{"name":"decreased protein localization to shmoo membrane fusion domain","type":"exact"},{"name":"decreased protein localization to shmoo projection membrane","type":"related"},{"name":"reduced protein localization to shmoo tip membrane","type":"exact"}],"termid":"FYPO:0006587"}


id: PBO:0043866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 3 pseudogene 1","termid":"PBO:0043866"}


id: GO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell proliferation","termid":"GO:0060011"}


id: PATO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased size","secondary_identifiers":["PATO:0001202"],"synonyms":[{"name":"big","type":"related"},{"name":"enlarged","type":"related"},{"name":"expanded","type":"related"},{"name":"great","type":"related"},{"name":"large","type":"related"}],"termid":"PATO:0000586"}


id: GO:0042052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of a rhabdomere within a cell. The rhabdomere is the organelle on the apical surface of a photoreceptor cell that contains the visual pigments.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhabdomere development","synonyms":[{"name":"rhabdomere organization","type":"exact"}],"termid":"GO:0042052"}


id: PBO:0075036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-47","termid":"PBO:0075036"}


id: PBO:0059403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33","termid":"PBO:0059403"}


id: PBO:0049680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHB pseudogene 1","termid":"PBO:0049680"}


id: PBO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxyphenylpyruvate dioxygenase","termid":"PBO:0050531"}


id: GO:0033683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in the endonucleolytic cleavage of the damaged strand of DNA. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound.","definition_xrefs":["GOC:elh","PMID:8631896"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision (obsolete GO:0033683)","synonyms":[{"name":"DNA incision involved in nucleotide-excision repair","type":"exact"},{"name":"nucleic acid cleavage involved in nucleotide-excision repair","type":"exact"}],"termid":"GO:0033683"}


id: GO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"membrane potential driven uniporter activity","synonyms":[{"name":"porter","type":"broad"}],"termid":"GO:0022810"}


id: GO:0034447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"very-low-density lipoprotein particle clearance","synonyms":[{"name":"VLDL clearance","type":"exact"}],"termid":"GO:0034447"}


id: PBO:0028181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_selenite_ion","termid":"PBO:0028181"}


id: GO:0098910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"}


id: GO:0110092
data:
  {"annotated_genes":["SJAG_00113","SJAG_03092","SJAG_05260","SJAG_00140","SJAG_01370","SJAG_01777","SJAG_03287","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83196,85638,86901,91286,93722,96052,96114,101440],"is_not":false,"summary":null,"term":"GO:0110092"}]},"cv_name":"cellular_component","definition":"The area of a motile nucleus closest to the direction of movement.","definition_xrefs":["GOC:vw","PMID:15030757","GOC:mah","GOC:al","PMID:24335254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_01370":null,"SJAG_01777":null,"SJAG_02246":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nucleus leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail nucleus leading edge","type":"narrow"}],"termid":"GO:0110092","terms_by_termid":{"GO:0110092":null}}


id: PBO:0082683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression","termid":"PBO:0082683"}


id: GO:0001544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primordial follicles including proliferation and shape changes of granulosa and/or theca cells until oocyte is surrounded by one layer of cuboidal shaped granulosa cells (primary follicle).","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of primordial ovarian follicle growth","termid":"GO:0001544"}


id: PATO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's possessing a small, spike-like shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spur shaped","termid":"PATO:0002540"}


id: PR:Q9P7H8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome-associated protein ECM29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component ecm29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.01","secondary_identifiers":["UniProtKB:Q9P7H8"],"synonyms":[{"name":"SPAC1782.01","type":"related"},{"name":"Spom972h-ECM29","type":"exact"}],"termid":"PR:Q9P7H8"}


id: PBO:0074640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 32","termid":"PBO:0074640"}


id: GO:0048104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of hairs or sensory bristles that cover the body surface of an adult, such that they all point in a uniform direction along the plane of the epithelium from which they project.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of body hair or bristle planar orientation","termid":"GO:0048104"}


id: PBO:0042111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC183 antisense RNA 1","termid":"PBO:0042111"}


id: GO:1905262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["PMID:26653857","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic DNA double-strand break formation","termid":"GO:1903342"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0140013","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"negative regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","synonyms":[{"name":"down regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"downregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"inhibition of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"}],"termid":"GO:1905262"}


id: GO:0031234
data:
  {"annotated_genes":["SJAG_02233","SJAG_02605","SJAG_02444","SJAG_03081","SJAG_04266","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107015],"is_not":false,"summary":null,"term":"GO:0031234"},{"annotations":[110454,90272,102869,103528,105452],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The component of a plasma membrane consisting of gene products and protein complexes that are loosely bound to its cytoplasmic surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"},{"relation_name":"part_of","term_name":"cytoplasmic side of plasma membrane","termid":"GO:0009898"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to cytoplasmic side of plasma membrane","type":"narrow"},{"name":"extrinsic to internal leaflet of plasma membrane","type":"exact"},{"name":"extrinsic to internal side of plasma membrane","type":"exact"}],"termid":"GO:0031234","terms_by_termid":{"GO:0005834":null,"GO:0031234":null}}


id: GO:0140780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism effects a change in an anatomical system process of its host organism.","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host system process (obsolete GO:0140780)","termid":"GO:0140780"}


id: PBO:0013452
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AceTaldehyde Dehydrogenase","termid":"PBO:0013452"}


id: SO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is not divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift"],"termid":"SO:0000865"}


id: PBO:0036172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036172"}


id: GO:0062213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peroxynitrite = nitrate.","definition_xrefs":["PMID:30524950","RHEA:63116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"peroxynitrite isomerase activity","termid":"GO:0062213"}


id: PBO:0078933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 1-1","termid":"PBO:0078933"}


id: GO:0046478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactosylceramides, Gal-beta-(1->4)-Glc-beta-(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group. They are the precursors of both gangliosides and globosides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide metabolic process","termid":"GO:0006672"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lactosylceramide metabolic process","synonyms":[{"name":"lactosylceramide metabolism","type":"exact"}],"termid":"GO:0046478"}


id: PBO:0081876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 818, pseudogene","termid":"PBO:0081876"}


id: MOD:00212
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["PubMed:7981196","PubMed:7947803","RESID:AA0207","Unimod:407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-4-hydroxycinnamyl-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2E)-3-(4-hydroxyphenyl)prop-2-enoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"Hydroxycinnamyl","type":"related"},{"name":"MOD_RES S-(4-hydroxycinnamyl)cysteine","type":"exact"},{"name":"S-4-hydroxycinnamyl-L-cysteine","type":"exact"},{"name":"S-para-coumaryl-L-cysteine","type":"exact"},{"name":"cinnamate cysteine thioester","type":"exact"},{"name":"hydroxycinnamyl","type":"related"}],"termid":"MOD:00212"}


id: GO:0021742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the abducens nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nucleus development","termid":"GO:0021742"}


id: GO:0005702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the polytene chromosome where the diameter is considerably decreased, probably resulting from local differences in chromosome organization.","definition_xrefs":["ISBN:0120649012","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome weak point","synonyms":[{"name":"constriction","type":"broad"}],"termid":"GO:0005702"}


id: GO:0102925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-galactose + solanidine = H+ + gamma-solanine + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"solanine UDP-galactose galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8875"],"termid":"GO:0102925"}


id: FYPO:0000455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"increased number of double-strand break sites","termid":"FYPO:0003543"},{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites during vegetative growth","synonyms":[{"name":"accumulation of DNA damage foci during vegetative growth","type":"related"},{"name":"accumulation of double-strand break sites during vegetative growth","type":"exact"},{"name":"increased number of DNA damage foci during vegetative growth","type":"related"},{"name":"increased number of double-strand break sites during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000455"}


id: PR:P87216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vip1 gene.","definition_xrefs":["UniProtKB:P87216","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.06","synonyms":[{"name":"Spom972h-vip1","type":"exact"}],"termid":"PR:P87216"}


id: PBO:0043876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 4","termid":"PBO:0043876"}


id: FYPO:0004672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"inviable elongated vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004672"}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: PBO:0073536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2A","termid":"PBO:0073536"}


id: PR:O74439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggc1 gene.","definition_xrefs":["UniProtKB:O74439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1682.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.09c","synonyms":[{"name":"Spom972h-ggc1","type":"exact"}],"termid":"PR:O74439"}


id: GO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of a peptide-linked thiazoline to thiazole.","definition_xrefs":["GOC:mah","PMID:19058272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptidyl-thiazoline dehydrogenase activity","termid":"GO:0018136"}


id: PBO:0083920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; major enzyme of polyprenol synthesis in both the endoplasmic reticulum (ER) and in lipid droplets; participates in ER protein sorting; human ortholog DHDDS functionally complements the heat sensitive growth defect of a ts allele, and is associated with retinitis pigmentosa","termid":"PBO:0083920"}


id: PBO:0004625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo-family BRCT domain protein (predicted)","termid":"PBO:0004625"}


id: GO:0043155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the light-dependent reaction of photosynthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis","termid":"GO:1905156"},{"relation_name":"negatively_regulates","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of photosynthesis, light reaction","synonyms":[{"name":"down regulation of photosynthesis, light reaction","type":"exact"},{"name":"down-regulation of photosynthesis, light reaction","type":"exact"},{"name":"downregulation of photosynthesis, light reaction","type":"exact"},{"name":"inhibition of photosynthesis, light reaction","type":"narrow"}],"termid":"GO:0043155"}


id: GO:0016162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.91-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-glucan cellobiosidase activity","type":"related"},{"name":"C1 cellulase activity","type":"related"},{"name":"CBH 1","type":"related"},{"name":"avicelase activity","type":"broad"},{"name":"beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"beta-1,4-glucan cellobiosylhydrolase activity","type":"related"},{"name":"cellobiohydrolase I","type":"related"},{"name":"cellobiohydrolase activity","type":"related"},{"name":"cellobiosidase activity","type":"related"},{"name":"exo-1,4-beta-D-glucanase activity","type":"related"},{"name":"exo-beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"exo-cellobiohydrolase activity","type":"related"},{"name":"exocellobiohydrolase activity","type":"related"},{"name":"exoglucanase activity","type":"related"}],"termid":"GO:0016162"}


id: SO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of nucleotides that has been algorithmically derived from an alignment of two or more different sequences.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly","termid":"SO:0001248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_assembly","secondary_identifiers":["http://en.wikipedia.org/wiki/Sequence_assembly"],"synonyms":[{"name":"sequence assembly","type":"exact"}],"termid":"SO:0000353"}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:di","PMID:21489137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: GO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the cells in the petal epidermis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal epidermis patterning","termid":"GO:0080172"}


id: GO:0002722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell mediated immunity","termid":"GO:0002713"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"negatively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell cytokine production","synonyms":[{"name":"down regulation of B cell cytokine production","type":"exact"},{"name":"down-regulation of B cell cytokine production","type":"exact"},{"name":"downregulation of B cell cytokine production","type":"exact"},{"name":"inhibition of B cell cytokine production","type":"narrow"},{"name":"negative regulation of B lymphocyte cytokine production","type":"exact"},{"name":"negative regulation of B-cell cytokine production","type":"exact"},{"name":"negative regulation of B-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002722"}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0063159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 5","termid":"PBO:0063159"}


id: PBO:0059262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L28","termid":"PBO:0059262"}


id: PBO:0089097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog, unknown biological role","termid":"PBO:0089097"}


id: PBO:0048390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 1","termid":"PBO:0048390"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: PBO:0078458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 10 (non-functional)","termid":"PBO:0078458"}


id: PATO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000752 mating value (obsolete PATO:0000752)","termid":"PATO:0000752"}


id: PR:Q10317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.05","synonyms":[{"name":"Spom972h-med20","type":"exact"},{"name":"mediator complex subunit 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10317"}


id: PBO:0067700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 8","termid":"PBO:0067700"}


id: GO:0018809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: E-phenylitaconyl-CoA + H2O = (hydroxymethylphenyl)succinyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"E-phenylitaconyl-CoA hydratase activity","termid":"GO:0018809"}


id: PBO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC82 ortholog","termid":"PBO:0036279"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00183","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: GO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell","termid":"GO:0043657"}


id: PBO:0027909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_hydroxyurea","termid":"PBO:0027909"}


id: PR:O74883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12069:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.13","secondary_identifiers":["UniProtKB:O74883"],"synonyms":[{"name":"RNA polymerase III subunit C37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC330.13","type":"related"},{"name":"Spom972h-POLR3E","type":"exact"}],"termid":"PR:O74883"}


id: GO:0047103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestan-26-al = NADH + 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanate.","definition_xrefs":["RHEA:34627","PMID:8496170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-alpha,7-alpha,12-alpha-trihydroxycholestan-26-al 26-oxidoreductase activity","secondary_identifiers":["MetaCyc:1.2.1.40-RXN","EC:1.14.15.15"],"synonyms":[{"name":"3-alpha,7-alpha,12-alpha-trihydroxycholestan-26-al 26-dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-al dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-al:NAD+ 26-oxidoreductase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-dehydrogenase activity","type":"exact"},{"name":"3alpha,7alpha,12alpha-trihydroxycholestan-26-al 26-oxidoreductase activity","type":"exact"},{"name":"THAL-NAD oxidoreductase activity","type":"exact"},{"name":"cholestanetriol-26-al 26-dehydrogenase activity","type":"related"},{"name":"trihydroxydeoxycoprostanal dehydrogenase activity","type":"exact"}],"termid":"GO:0047103"}


id: PBO:0064901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit alpha","termid":"PBO:0064901"}


id: PBO:0063429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 3","termid":"PBO:0063429"}


id: GO:0046236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandelate metabolic process","termid":"GO:0018924"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mandelate biosynthetic process","synonyms":[{"name":"mandelate anabolism","type":"exact"},{"name":"mandelate biosynthesis","type":"exact"},{"name":"mandelate formation","type":"exact"},{"name":"mandelate synthesis","type":"exact"}],"termid":"GO:0046236"}


id: PBO:0030758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_miconazole","termid":"PBO:0030758"}


id: PBO:0062818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 11","termid":"PBO:0062818"}


id: PBO:0059823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 3","termid":"PBO:0059823"}


id: PBO:0058016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3942","termid":"PBO:0058016"}


id: GO:0102556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dammarenediol-II + NADPH + H+ + O2 = (20S)-protopanaxadiol + NADP + H2O.","definition_xrefs":["EC:1.14.14.120","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dammarenediol 12-hydroxylase activity","secondary_identifiers":["RHEA:38579","MetaCyc:RXN-14975"],"termid":"GO:0102556"}


id: GO:0015930
data:
  {"annotated_genes":["SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of L-glutamine and 2-oxoglutarate from L-glutamate, using NADH, NADPH or ferredoxin as hydrogen acceptors.","definition_xrefs":["EC:1.4.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glutamate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015930","terms_by_termid":{"GO:0016040":null}}


id: FYPO:0001245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to cobalt","synonyms":[{"name":"hypersensitive to cobalt","type":"exact"},{"name":"sensitive to cobalt during mitotic cell cycle","type":"related"},{"name":"sensitive to cobalt during vegetative growth","type":"exact"},{"name":"sensitive to cobalt ions","type":"exact"}],"termid":"FYPO:0001245"}


id: FYPO:0007096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is decreased.","definition_xrefs":["PMID:31495586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to actin fusion focus","synonyms":[{"name":"decreased protein localisation to actin fusion focus","type":"exact"},{"name":"reduced protein localization to actin fusion focus","type":"exact"}],"termid":"FYPO:0007096"}


id: PBO:0081238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 7","termid":"PBO:0081238"}


id: GO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:jl","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of vacuolar membrane (obsolete GO:0000306)","synonyms":[{"name":"extrinsic to vacuolar membrane","type":"exact"}],"termid":"GO:0000306"}


id: PBO:0047320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 4","termid":"PBO:0047320"}


id: FYPO:0000768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valinomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to valinomycin","synonyms":[{"name":"resistance to valinomycin during mitotic cell cycle","type":"related"},{"name":"resistance to valinomycin during vegetative growth","type":"exact"},{"name":"resistant to valinomycin","type":"exact"}],"termid":"FYPO:0000768"}


id: SO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to decide a sequence of nucleotides, nucleotide analogs, or amino acids that has been designed by an experimenter and which may, or may not, correspond with any natural sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_sequence","synonyms":[{"name":"synthetic sequence","type":"exact"}],"termid":"SO:0000351"}


id: GO:0099172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynapse organization","synonyms":[{"name":"presynapse development","type":"exact"},{"name":"presynapse morphogenesis","type":"related"},{"name":"presynapse organisation","type":"exact"},{"name":"presynapse organization and biogenesis","type":"related"}],"termid":"GO:0099172"}


id: PBO:0090979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric monoester hydrolase Ptf1","termid":"PBO:0090979"}


id: PBO:0085440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polynucleotide kinase present on rDNA; required for efficient transcription termination by RNA polymerase I; functions with Las1p in a conserved mechanism to cleave pre-rRNA at a specific site during rRNA processing and ribosome biogenesis; required for cell growth; mRNA is cell-cycle regulated","termid":"PBO:0085440"}


id: GO:0018876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzonitrile. Benzonitrile is used as a solvent and chemical intermediate in the pharmaceutical, dyestuffs and rubber industries. It is highly toxic and harmful in contact with skin.","definition_xrefs":["UM-BBD_pathwayID:bzn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzonitrile metabolic process","synonyms":[{"name":"benzonitrile metabolism","type":"exact"}],"termid":"GO:0018876"}


id: GO:0120062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any gastric emptying process, the process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of gastric emptying","termid":"GO:0120060"},{"relation_name":"positively_regulates","term_name":"gastric emptying","termid":"GO:0035483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric emptying","termid":"GO:0120062"}


id: GO:0099586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into postsynaptic cytosol","termid":"GO:0099586"}


id: PBO:0087480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p; chromatin assembly by CAF-1 is important for multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure, deactivation of the DNA damage checkpoint after DNA repair, chromatin dynamics during transcription; and repression of divergent transcription; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087480"}


id: FYPO:0003259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal proline import","synonyms":[{"name":"normal L-proline import","type":"exact"},{"name":"normal L-proline import across plasma membrane","type":"exact"},{"name":"normal proline import during mitotic cell cycle","type":"related"},{"name":"normal proline import during vegetative growth","type":"exact"},{"name":"normal proline import into cell","type":"exact"},{"name":"normal proline uptake","type":"exact"}],"termid":"FYPO:0003259"}


id: GO:0034407
data:
  {"annotated_genes":["SJAG_01288","SJAG_01835","SJAG_04483","SJAG_02222","SJAG_04771","SJAG_00876","SJAG_04666","SJAG_04668","SJAG_01290","SJAG_03705","SJAG_00218","SJAG_03587","SJAG_01787","SJAG_04462","SJAG_00610","SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[109765,83883,104194,112503,87507,105758,87517,102473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83315,88383],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[99120,88369,86675,101690,114620],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"cell wall (1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-beta-D-glucan metabolic process","type":"exact"},{"name":"cell wall 1,3-beta-glucan metabolic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan metabolism","type":"exact"},{"name":"cell wall beta-1,3 glucan metabolic process","type":"exact"},{"name":"cell wall beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0034407","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0120066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal part of the pylorus between the pyloric antrum and the pyloric sphincter.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric canal smooth muscle contraction","termid":"GO:0120066"}


id: PBO:0046021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 2","termid":"PBO:0046021"}


id: PR:O13987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mga2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and IPT/TIG repeat-containing protein C26H5.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.05","synonyms":[{"name":"Spom972h-mga2","type":"exact"}],"termid":"PR:O13987"}


id: PBO:0067407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 517, pseudogene","termid":"PBO:0067407"}


id: GO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of N-terminal peptidyl-cysteine, or peptidyl-serine, to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-amino acid deamination to pyruvic acid","termid":"GO:0018387"}


id: PBO:0091759
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2108180_2108181insA","termid":"PBO:0091759"}


id: GO:0033199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = 4,5-bisdiphosphoinositol-1D-myoinositol (1,2,3,6)tetrakisphosphate, and ATP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate = 5,6-bisdiphosphoinositol-1D-myoinositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol heptakisphosphate 4-kinase or 6-kinase activity (obsolete GO:0033199)","synonyms":[{"name":"inositol heptakisphosphate 4-kinase or 6-kinase activity","type":"exact"}],"termid":"GO:0033199"}


id: GO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell expansion that results in an increase in cell size along the axis of an organ in a polarized fashion.","definition_xrefs":["PMID:11978864"],"gene_count":0,"genotype_count":0,"name":"obsolete polar cell elongation (obsolete GO:0010153)","synonyms":[{"name":"polar cell elongation","type":"exact"},{"name":"polarity-dependent cell elongation","type":"narrow"}],"termid":"GO:0010153"}


id: PBO:0067060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 82, pseudogene","termid":"PBO:0067060"}


id: PBO:0064437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 2","termid":"PBO:0064437"}


id: PBO:0040475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATRX chromatin remodeler","termid":"PBO:0040475"}


id: SO:0000680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon that is not the usual AUG sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"start_codon","termid":"SO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_start_codon","synonyms":[{"name":"non ATG start codon","type":"exact"},{"name":"non canonical start codon","type":"exact"},{"name":"non-canonical start codon","type":"exact"}],"termid":"SO:0000680"}


id: PBO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 68","termid":"PBO:0050365"}


id: GO:0010712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen metabolic process","synonyms":[{"name":"regulation of collagen metabolism","type":"exact"}],"termid":"GO:0010712"}


id: GO:1903368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of foraging behavior.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:8677262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of foraging behavior","termid":"GO:1903368"}


id: PBO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric ester hydrolase Ssu72 (predicted)","termid":"PBO:0001917"}


id: GO:0004450
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73344],"is_not":false,"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH.","definition_xrefs":["RHEA:19629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.1.42","Reactome:R-HSA-389540","Reactome:R-HSA-389550","Reactome:R-HSA-450984","MetaCyc:ISOCITDEH-RXN"],"synonyms":[{"name":"NADP isocitric dehydrogenase activity","type":"exact"},{"name":"NADP(+)-ICDH activity","type":"related"},{"name":"NADP(+)-IDH activity","type":"related"},{"name":"NADP(+)-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-dependent isocitric dehydrogenase activity","type":"exact"},{"name":"NADP-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"dual-cofactor-specific isocitrate dehydrogenase activity","type":"related"},{"name":"isocitrate (NADP) dehydrogenase activity","type":"exact"},{"name":"isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NADP) activity","type":"exact"},{"name":"isocitrate dehydrogenase (NADP-dependent) activity","type":"exact"},{"name":"isocitrate:NADP+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"triphosphopyridine nucleotide-linked isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004450","terms_by_termid":{"GO:0004450":null}}


id: PBO:0065385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSG11, PSG2 and PSG5 antisense RNA 1","termid":"PBO:0065385"}


id: GO:0061776
data:
  {"annotated_genes":["SJAG_03698","SJAG_05019","SJAG_01831","SJAG_03682","SJAG_03436","SJAG_03161","SJAG_03418","SJAG_03926","SJAG_02545","SJAG_00871","SJAG_01067","SJAG_01332","SJAG_03832","SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83631,84911,86839,99467,102675,104163,104248,108598,110000,112605,113232,113582,113776,114299],"is_not":false,"summary":null,"term":"GO:0061776"}]},"cv_name":"molecular_function","definition":"A DNA binding activity in which a protein complex interacts with more than one DNA duplex to encircle the DNA molecules with a loose fitting ring.","definition_xrefs":["PMID:16179255","PMID:26687354","PMID:27797071","GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00768":null,"SJAG_00871":null,"SJAG_01067":null,"SJAG_01332":null,"SJAG_01831":null,"SJAG_02545":null,"SJAG_03161":null,"SJAG_03418":null,"SJAG_03436":null,"SJAG_03682":null,"SJAG_03698":null,"SJAG_03832":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"topological DNA co-entrapment activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"topological DNA entrapment activity","type":"related"}],"termid":"GO:0061776","terms_by_termid":{"GO:0061776":null}}


id: PBO:0017035
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nus1 can form a catalytically active complex with human DHDS (hCIT)","termid":"PBO:0017035"}


id: PBO:0027705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_ATPase_activity","termid":"PBO:0027705"}


id: PBO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition","termid":"PBO:0006715"}


id: PBO:0062883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVCA2 serine hydrolase domain containing","termid":"PBO:0062883"}


id: GO:0047970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanidinoacetate + H2O = glycine + urea.","definition_xrefs":["EC:3.5.3.2","RHEA:23268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"guanidinoacetase activity","secondary_identifiers":["MetaCyc:GUANIDINOACETASE-RXN","KEGG_REACTION:R00775"],"synonyms":[{"name":"glycocyaminase activity","type":"related"},{"name":"guanidinoacetate amidinohydrolase activity","type":"related"}],"termid":"GO:0047970"}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: PBO:0055967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and death domain containing 1","termid":"PBO:0055967"}


id: GO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear receptor protein. Nuclear receptor proteins are DNA-binding transcription factors which are regulated by binding to a ligand.","definition_xrefs":["PMID:7776974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"nuclear receptor binding","secondary_identifiers":["GO:0035258","GO:0035257"],"synonyms":[{"name":"ligand-dependent nuclear receptor binding","type":"exact"},{"name":"ligand-dependent nuclear receptor interactor activity","type":"related"},{"name":"nuclear hormone receptor binding","type":"exact"},{"name":"steroid hormone receptor binding","type":"broad"}],"termid":"GO:0016922"}


id: GO:0004129
data:
  {"annotated_genes":["SJAG_05629","SJAG_MIT13","SJAG_01355","SJAG_03337","SJAG_07007","SJAG_00976","SJAG_MIT20","SJAG_01190","SJAG_02504","SJAG_MIT04","SJAG_01077"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84012,85088,87887,104718,110857,111297,112114,113528,115751,115772,115796],"is_not":false,"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["RHEA:11436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0016491","GO:0005215","GO:0003674","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"cytochrome-c oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.1.1.9","MetaCyc:CYTOCHROME-C-OXIDASE-RXN","Reactome:R-HSA-163214"],"synonyms":[{"name":"Warburg's respiratory enzyme activity","type":"related"},{"name":"aa3-type cytochrome c oxidase","type":"narrow"},{"name":"ba3-type cytochrome c oxidase","type":"narrow"},{"name":"caa3-type cytochrome c oxidase","type":"narrow"},{"name":"cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"cytochrome a3 activity","type":"narrow"},{"name":"cytochrome aa3 activity","type":"narrow"},{"name":"cytochrome c oxidase activity","type":"exact"},{"name":"cytochrome oxidase activity","type":"related"},{"name":"indophenol oxidase","type":"narrow"},{"name":"indophenolase","type":"narrow"}],"termid":"GO:0004129","terms_by_termid":{"GO:0004129":null}}


id: PBO:0088020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topo I and topo II; mutations in the human homolog, TDP1, result in the a neurodegenerative disease, spinocerebellar ataxia with axonal neuropathy (SCAN1); yeast cells and human rhabdomyosarcoma lines that overexpress TDP1 both exhibit elevated dosage chromosomal instability (dCIN)","termid":"PBO:0088020"}


id: PBO:0069594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 869, pseudogene","termid":"PBO:0069594"}


id: PBO:0076645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 2","termid":"PBO:0076645"}


id: GO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + terephthalate = (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+.","definition_xrefs":["EC:1.14.12.15","RHEA:10312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"terephthalate 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05148","MetaCyc:1.14.12.15-RXN","UM-BBD_reactionID:r0150"],"synonyms":[{"name":"1,4-dicarboxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018628"}


id: PBO:0072118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 7","termid":"PBO:0072118"}


id: PR:O74740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02729","PRO:DNx","PANTHER:PTHR11203:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor two protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.15c","secondary_identifiers":["UniProtKB:O74740"],"synonyms":[{"name":"Spom972h-CPSF2","type":"exact"}],"termid":"PR:O74740"}


id: PBO:0072590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 36","termid":"PBO:0072590"}


id: PBO:0059840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR2 pseudogene 2","termid":"PBO:0059840"}


id: FYPO:0007310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0002382"},{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation at centromere during vegetative growth","termid":"FYPO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K12 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K12 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007310"}


id: GO:1904297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["PMID:18279313","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of osmolarity-sensing cation channel activity","termid":"GO:1904295"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of osmolarity-sensing cation channel activity","synonyms":[{"name":"activation of osmolarity-sensing cation channel activity","type":"narrow"},{"name":"up regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"up-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"upregulation of osmolarity-sensing cation channel activity","type":"exact"}],"termid":"GO:1904297"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: GO:0009765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthesis, light harvesting","synonyms":[{"name":"energy dissipation","type":"related"}],"termid":"GO:0009765"}


id: GO:0033333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin development","termid":"GO:0033333"}


id: FYPO:0001862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost due to abnormal meiotic chromosome segregation at a higher frequency than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss during meiotic cell cycle","termid":"FYPO:0001860"},{"relation_name":"output_of","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased minichromosome loss upon segregation during meiotic cell cycle","synonyms":[{"name":"increased plasmid loss upon segregation during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001862"}


id: GO:0005047
data:
  {"annotated_genes":["SJAG_00360","SJAG_01759","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72151,78322,90333],"is_not":false,"summary":null,"term":"GO:0005047"}]},"cv_name":"molecular_function","definition":"Binding to a signal recognition particle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_01558":null,"SJAG_01759":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"signal recognition particle binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"docking protein","type":"broad"},{"name":"signal recognition particle receptor","type":"narrow"}],"termid":"GO:0005047","terms_by_termid":{"GO:0005047":null}}


id: CHEBI:32588
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal chloride salt with a K(+) counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium chloride","termid":"CHEBI:32588"}


id: GO:0009842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid that contains unstacked, phycobilisome-bearing thylakoid membranes and is surrounded by a double membrane with a peptidoglycan layer in the intermembrane space between the two envelope membranes. Cyanelles are characteristic of algae in the class Glaucophyta, and may represent an ancestral form of plastid.","definition_xrefs":["ISBN:1402001894","ISBN:0521316871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle","synonyms":[{"name":"cyanoplast","type":"exact"},{"name":"muroplast","type":"exact"}],"termid":"GO:0009842"}


id: PR:Q10668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.03c","synonyms":[{"name":"Spom972h-swi2","type":"exact"}],"termid":"PR:Q10668"}


id: PBO:0109476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (truncated) Wtf1","termid":"PBO:0109476"}


id: PR:O74512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf14 gene.","definition_xrefs":["UniProtKB:O74512","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.02","synonyms":[{"name":"Spom972h-wtf14","type":"exact"}],"termid":"PR:O74512"}


id: PBO:0059332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 1","termid":"PBO:0059332"}


id: GO:0040037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of FGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of FGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040037"}


id: GO:0110033
data:
  {"annotated_genes":["SJAG_02311","SJAG_02426","SJAG_00266","SJAG_01245","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104396,96654,88031,113081,88776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway, the series of molecular signals generated as a consequence of glucose binding to a G protein-coupled receptor, where the pathway proceeds with activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP (cAMP).","definition_xrefs":["PMID:24297439","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106070"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"regulates","term_name":"adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0010619"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of adenylate cyclase-activating glucose-activated G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0110033","terms_by_termid":{"GO:0110034":null}}


id: GO:0060930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to sinoatrial (SA) node cell fates and their capacity to differentiate into SA node cells. SA node cells are pacemaker cells that are found in the sinoatrial node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell fate commitment","termid":"GO:0060927"},{"relation_name":"part_of","term_name":"sinoatrial node cell differentiation","termid":"GO:0060921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node cell fate commitment","synonyms":[{"name":"SA node cell commitment","type":"exact"},{"name":"SAN cell commitment","type":"exact"},{"name":"sinus node cell commitment","type":"narrow"}],"termid":"GO:0060930"}


id: FYPO:0001408
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116127],"is_not":false,"summary":null,"term":"FYPO:0001408"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells show increased sensitivity to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth at high temperature","termid":"FYPO:0000082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"sensitive to heat shock","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased growth during cellular response to heat shock","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to heat shock","type":"exact"},{"name":"hypersensitive to heat shock","type":"exact"},{"name":"sensitive to heat shock during mitotic cell cycle","type":"related"},{"name":"sensitive to heat shock during vegetative growth","type":"exact"},{"name":"thermo-sensitive","type":"related"},{"name":"thermosensitive","type":"related"}],"termid":"FYPO:0001408","terms_by_termid":{"FYECO:0000117":null,"FYPO:0001408":null}}


id: PBO:0047305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl-tRNA synthetase subunit beta","termid":"PBO:0047305"}


id: FYPO:0004574
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[116319],"is_not":false,"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from sub-telomeric regions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:25398909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased subtelomere-derived RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"accumulation of subtelomere-derived RNA transcripts","type":"related"},{"name":"increased subtelomere-derived RNA accumulation","type":"related"},{"name":"increased subtelomere-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased subtelomere-derived RNA level during vegetative growth","type":"exact"},{"name":"increased subtelomere-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0004574","terms_by_termid":{"FYPO:0004574":null}}


id: PR:Q9USL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm18 gene.","definition_xrefs":["UniProtKB:Q9USL7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein rsm18, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.04","synonyms":[{"name":"Spom972h-rsm18","type":"exact"}],"termid":"PR:Q9USL7"}


id: PBO:0048418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 6","termid":"PBO:0048418"}


id: GO:0004055
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70578],"is_not":false,"summary":null,"term":"GO:0004055"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.","definition_xrefs":["EC:6.3.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"argininosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70577","RHEA:10932","MetaCyc:ARGSUCCINSYN-RXN"],"synonyms":[{"name":"L-citrulline:L-aspartate ligase (AMP-forming)","type":"related"},{"name":"arginine succinate synthetase activity","type":"related"},{"name":"argininosuccinate synthetase activity","type":"related"},{"name":"argininosuccinic acid synthetase activity","type":"related"},{"name":"arginosuccinate synthetase activity","type":"related"},{"name":"citrulline--aspartate ligase activity","type":"related"}],"termid":"GO:0004055","terms_by_termid":{"GO:0004055":null}}


id: PBO:0061749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 2","termid":"PBO:0061749"}


id: PBO:0029712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_5-fluorouracil","termid":"PBO:0029712"}


id: PBO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12","termid":"PBO:0061221"}


id: GO:1990498
data:
  {"annotated_genes":["SJAG_02761","SJAG_02624","SJAG_01613","SJAG_03540","SJAG_00918","SJAG_01224","SJAG_01330","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96586,97660,102686,115370],"is_not":false,"summary":null,"term":"GO:1990498"},{"annotations":[103900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[114842,95408,103901,94787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"}]},"cv_name":"cellular_component","definition":"Any microtubule that is part of a mitotic spindle; anchored at one spindle pole.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01330":null,"SJAG_01613":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0072686"],"is_obsolete":false,"name":"mitotic spindle microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990498","terms_by_termid":{"GO:1990498":null,"GO:1990537":null,"GO:1990941":null}}


id: GO:0062085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"},{"relation_name":"is_a","term_name":"positive regulation of capsule organization","termid":"GO:1901915"},{"relation_name":"positively_regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062085"}


id: GO:0102909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD + 2-hydroxyglutarate = H+ + 2-oxoglutarate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ketoglutarate reductase activity (NADH-dependent) (obsolete GO:0102909)","termid":"GO:0102909"}


id: PBO:0061984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 3","termid":"PBO:0061984"}


id: PBO:0041344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 52","termid":"PBO:0041344"}


id: FYPO:0005363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle kinetochore microtubule depolymerization, occurs to a lesser extent than normal during mitotic chromosome recapture.","definition_xrefs":["PomBase:mah","PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000337","FYPO:0000054","FYPO:0000631"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased kinetochore microtubule catastrophe during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased kinetochore microtubule depolymerisation during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased kinetochore microtubule shrinkage during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during kinetochore retrieval","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to SPB","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during sister kinetochore recapture","type":"exact"},{"name":"reduced kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0005363"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["PubMed:5490222","RESID:AA0151#var","PubMed:111247","PubMed:1694179","Unimod:137#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: PBO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family, Sea2 (predicted)","termid":"PBO:0017663"}


id: PBO:0076709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 7 like 2","termid":"PBO:0076709"}


id: PBO:0047433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 4","termid":"PBO:0047433"}


id: FYPO:0001150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methylamine. Cells stop growing (and may die) at a concentration of methylamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to methylamine","synonyms":[{"name":"hypersensitive to methylamine","type":"exact"},{"name":"sensitive to methylamine during mitotic cell cycle","type":"related"},{"name":"sensitive to methylamine during vegetative growth","type":"exact"}],"termid":"FYPO:0001150"}


id: PR:O59668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RMD5 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LisH domain-containing protein C29A3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.03c","secondary_identifiers":["UniProtKB:O59668"],"synonyms":[{"name":"Spom972h-RMND5A","type":"exact"}],"termid":"PR:O59668"}


id: PBO:0028297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_old_growing_cell_tip","termid":"PBO:0028297"}


id: PBO:0028687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028687"}


id: PBO:0041578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C21orf91 overlapping transcript 1","termid":"PBO:0041578"}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: MOD:00224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to 1-chondroitin sulfate-L-aspartic acid ester","definition_xrefs":["PubMed:1898736","RESID:AA0219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-chondroitin sulfate-L-aspartic acid ester","synonyms":[{"name":"1-aspartic acid ester with 6-chondroitin 4-sulfate","type":"exact"},{"name":"1-chondroitin sulfate-L-aspartic acid ester","type":"exact"},{"name":"MOD_RES Aspartate 1-(chondroitin 4-sulfate)-ester","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-6-(1-L-aspartyl)-D-galactose)","type":"exact"},{"name":"protein-glycosaminoglycan-protein cross-link","type":"exact"}],"termid":"MOD:00224"}


id: PBO:0042781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 112","termid":"PBO:0042781"}


id: PBO:0041280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 6","termid":"PBO:0041280"}


id: FYPO:0002543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea (obsolete FYPO:0002543)","synonyms":[{"name":"decreased protein threonine phosphorylation at TP site during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to HU","type":"exact"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased protein threonine phosphorylation at threonine-proline site during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein threonine phosphorylation at Thr-Pro site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002543"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: PBO:0045730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E4F transcription factor 1","termid":"PBO:0045730"}


id: GO:0007409
data:
  {"annotated_genes":["SJAG_00845","SJAG_02566","SJAG_04232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114527],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0048671"},{"annotations":[97999],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045773"},{"annotations":[100014],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0050770"}]},"cv_name":"biological_process","definition":"De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0198506732","GOC:pg","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"axon development","termid":"GO:0061564"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02566":null,"SJAG_04232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axonogenesis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007410"],"synonyms":[{"name":"axon growth","type":"narrow"},{"name":"axon morphogenesis","type":"exact"},{"name":"neuron long process generation","type":"exact"}],"termid":"GO:0007409","terms_by_termid":{"GO:0045773":null,"GO:0048671":null,"GO:0050770":null}}


id: PBO:0038371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_application_role","termid":"PBO:0038371"}


id: GO:0010956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vitamin D biosynthetic process","termid":"GO:0010957"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of calcidiol 1-monooxygenase activity","termid":"GO:0060558"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcidiol 1-monooxygenase activity","termid":"GO:0010956"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: PBO:0088294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, zeta catalytic subunit Rev3","termid":"PBO:0088294"}


id: GO:0050402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylono-1,4-lactone + H2O = D-xylonate.","definition_xrefs":["MetaCyc:XYLONO-14-LACTONASE-RXN","EC:3.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"xylono-1,4-lactonase activity","secondary_identifiers":["MetaCyc:RXN-19753","RHEA:18341"],"synonyms":[{"name":"D-xylono-1,4-lactone lactonohydrolase activity","type":"related"},{"name":"xylono-g-lactonase activity","type":"related"},{"name":"xylonolactonase activity","type":"related"}],"termid":"GO:0050402"}


id: PBO:0005164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec8","termid":"PBO:0005164"}


id: PBO:0059760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 34","termid":"PBO:0059760"}


id: GO:0103044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + ATP + a [protein] C-terminal L-glutamate = ADP + hydrogenphosphate + H+ + a [protein] with C-terminal alpha-L-glutamate-alpha-L-glutamate.","definition_xrefs":["GOC:pz","EC:6.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal S6-glutamic acid ligase activity","termid":"GO:0018169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ribosomal protein S6 glutamate-glutamate ligase activity","secondary_identifiers":["MetaCyc:RXN0-6726"],"termid":"GO:0103044"}


id: GO:0150094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by cell surface receptor-mediated endocytosis, followed by intracellular degradation.","definition_xrefs":["PMID:18289866","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"amyloid-beta clearance by cellular catabolic process","synonyms":[{"name":"amyloid-beta clearance by phagocytosis","type":"narrow"}],"termid":"GO:0150094"}


id: GO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A lectin that exhibits calcium independent binding of beta-galactoside sugars.","definition_xrefs":["PMID:9786891"],"gene_count":0,"genotype_count":0,"name":"obsolete galectin (obsolete GO:0001577)","synonyms":[{"name":"S-type lectin","type":"exact"},{"name":"galectin","type":"exact"}],"termid":"GO:0001577"}


id: GO:0009146
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate breakdown","type":"exact"},{"name":"purine nucleoside triphosphate catabolism","type":"exact"},{"name":"purine nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009146","terms_by_termid":{"GO:0035863":null}}


id: PBO:0053571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 589","termid":"PBO:0053571"}


id: SO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases the level of mature, spliced and processed RNA with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"level_of_transcript_variant","termid":"SO:0001540"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcript_level_variant","synonyms":[{"name":"increased transcript level variant","type":"exact"}],"termid":"SO:0001542"}


id: GO:0022401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative adaptation of signaling pathway","synonyms":[{"name":"negative adaptation of signal transduction pathway","type":"exact"},{"name":"negative adaptation of signalling pathway","type":"exact"}],"termid":"GO:0022401"}


id: PATO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000023 relative compatability (obsolete PATO:0000023)","termid":"PATO:0000023"}


id: GO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that affects platelet aggregation in another organism. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:bf","GOC:fj","PMID:15922770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of blood coagulation in another organism","termid":"GO:0035806"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"perturbation of platelet aggregation in another organism","synonyms":[{"name":"modulation by organism of platelet aggregation in other organism","type":"exact"},{"name":"modulation of platelet aggregation in another organism","type":"exact"},{"name":"modulation of platelet aggregation in other organism","type":"exact"},{"name":"regulation of platelet aggregation in other organism","type":"related"}],"termid":"GO:0035892"}


id: PBO:0059729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 3","termid":"PBO:0059729"}


id: GO:1902574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in negative regulation of leucine import.","definition_xrefs":["PMID:22992726","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine import by regulation of transcription from RNA polymerase II promoter (obsolete GO:1902574)","termid":"GO:1902574"}


id: PBO:0089247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like","termid":"PBO:0089247"}


id: FYPO:0001497
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and elongated, and progression through the mitotic cell cycle is arrested in interphase. The cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"},{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable elongated cell with mitotic cell cycle arrest in interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"elongated inviable cell with mitotic cell cycle arrest in interphase during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell with mitotic cell cycle arrest in interphase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic interphase","type":"exact"},{"name":"inviable elongated vegetative cell with cell cycle arrest in interphase during mitotic cell cycle","type":"exact"},{"name":"inviable elongated vegetative cell with mitotic cell cycle arrest in interphase","type":"exact"},{"name":"inviable elongated vegetative cell with mitotic interphase arrest","type":"exact"},{"name":"lethal; elongated vegetative cell with mitotic cell cycle arrest in interphase","type":"exact"},{"name":"mitotic cell cycle arrest in interphase with elongated inviable cell","type":"exact"},{"name":"mitotic interphase arrested elongated inviable vegetative cell","type":"exact"}],"termid":"FYPO:0001497","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0050992
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98130],"is_not":false,"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dimethylallyl diphosphate metabolic process","termid":"GO:0050993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dimethylallyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPP biosynthesis","type":"exact"},{"name":"DPP biosynthetic process","type":"exact"},{"name":"dimethylallyl diphosphate anabolism","type":"exact"},{"name":"dimethylallyl diphosphate biosynthesis","type":"exact"},{"name":"dimethylallyl diphosphate formation","type":"exact"},{"name":"dimethylallyl diphosphate synthesis","type":"exact"},{"name":"dimethylallyl pyrophosphate biosynthesis","type":"exact"},{"name":"dimethylallyl pyrophosphate biosynthetic process","type":"exact"}],"termid":"GO:0050992","terms_by_termid":{"GO:0050992":null}}


id: GO:2000241
data:
  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s":[113385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"},{"annotations":[105489,91239],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110046"},{"annotations":[112934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":66,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00145":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00457":null,"SJAG_00514":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00987":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01000":null,"SJAG_01082":null,"SJAG_01113":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01345":null,"SJAG_01401":null,"SJAG_01515":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01794":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_01978":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02404":null,"SJAG_02481":null,"SJAG_02486":null,"SJAG_02592":null,"SJAG_02712":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_03048":null,"SJAG_03327":null,"SJAG_03371":null,"SJAG_03438":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03525":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03854":null,"SJAG_03887":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04205":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04457":null,"SJAG_04509":null,"SJAG_04655":null,"SJAG_04666":null,"SJAG_04682":null,"SJAG_04771":null,"SJAG_04813":null,"SJAG_04853":null,"SJAG_05153":null,"SJAG_05288":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000241","terms_by_termid":{"GO:0010520":null,"GO:0010845":null,"GO:0010846":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0040020":null,"GO:0045128":null,"GO:0045836":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051598":null,"GO:0051728":null,"GO:0060629":null,"GO:0062038":null,"GO:0062123":null,"GO:0062209":null,"GO:0075296":null,"GO:0075297":null,"GO:0090006":null,"GO:0090029":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0110046":null,"GO:0140434":null,"GO:0140648":null,"GO:0140748":null,"GO:1901993":null,"GO:1902103":null,"GO:1902917":null,"GO:1903024":null,"GO:1904514":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0033080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an immature T cell population by cell division in the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature T cell proliferation","termid":"GO:0033079"},{"relation_name":"part_of","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature T cell proliferation in thymus","synonyms":[{"name":"thymic T cell proliferation","type":"exact"},{"name":"thymocyte cell proliferation","type":"exact"},{"name":"thymocyte proliferation","type":"exact"}],"termid":"GO:0033080"}


id: PBO:0083432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YHR131C","termid":"PBO:0083432"}


id: PBO:0076747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 2","termid":"PBO:0076747"}


id: MOD:01514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}


id: GO:0061111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling involved in lung development","synonyms":[{"name":"epithelial-mesenchymal cell signalling involved in lung development","type":"exact"}],"termid":"GO:0061111"}


id: PBO:0040673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31 pseudogene 1","termid":"PBO:0040673"}


id: MOD:02041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-arginine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-arginine residue","synonyms":[{"name":"XlnkArg","type":"exact"}],"termid":"MOD:02041"}


id: GO:0106214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["GOC:se","PMID:26195667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"regulation of Golgi organization","termid":"GO:1903358"},{"relation_name":"regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"}


id: GO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phlobaphene metabolic process","termid":"GO:0051558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene biosynthetic process","termid":"GO:0051559"}


id: PBO:0089708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Utp15","termid":"PBO:0089708"}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: GO:0046168
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90027,102878],"is_not":false,"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate metabolic process","termid":"GO:0006072"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycerol-3-phosphate breakdown","type":"exact"},{"name":"glycerol-3-phosphate catabolism","type":"exact"},{"name":"glycerol-3-phosphate degradation","type":"exact"}],"termid":"GO:0046168","terms_by_termid":{"GO:0046168":null}}


id: GO:0005338
data:
  {"annotated_genes":["SJAG_01960","SJAG_04162","SJAG_04697","SJAG_01177","SJAG_00434","SJAG_00339"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84834,89370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[71667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[75186,74245,84199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[75187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[76570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[76571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleotide-sugar from one side of a membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729","PMID:15034926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-744230","GO:0005339","Reactome:R-HSA-744231","Reactome:R-HSA-9792608"],"termid":"GO:0005338","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null}}


id: GO:0033452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GUG codon-amino acid adaptor activity","synonyms":[{"name":"GTG codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033452"}


id: PBO:0069755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1038, pseudogene","termid":"PBO:0069755"}


id: PBO:0067636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 809, pseudogene","termid":"PBO:0067636"}


id: PBO:0085173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-mannosylated heat shock protein; secreted and covalently attached to the cell wall via beta-1,3-glucan and disulfide bridges; required for cell wall stability; induced by heat shock, oxidative stress, and nitrogen limitation; HSP150 has a paralog, PIR3, that arose from the whole genome duplication","termid":"PBO:0085173"}


id: PBO:0066922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 224","termid":"PBO:0066922"}


id: PBO:0046128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 2","termid":"PBO:0046128"}


id: PBO:0089716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9","termid":"PBO:0089716"}


id: PBO:0068092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 399","termid":"PBO:0068092"}


id: FYPO:0006337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the spindle pole body (SPB) occurs to a lesser extent than normal during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the SPB.","definition_xrefs":["PMID:8834801","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased interphase microtubule nucleation","termid":"FYPO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased interphase microtubule nucleation from spindle pole body","synonyms":[{"name":"decreased cytoplasmic microtubule nucleation from spindle pole body during mitotic interphase","type":"exact"},{"name":"decreased interphase microtubule nucleation by spindle pole body","type":"exact"},{"name":"decreased interphase microtubule nucleation from SPB","type":"exact"},{"name":"decreased interphase microtubule nucleation from spindle pole body during vegetative growth","type":"exact"},{"name":"decreased microtubule nucleation from spindle pole body during interphase of mitotic cell cycle","type":"exact"},{"name":"reduced interphase microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0006337"}


id: PBO:0057271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 495","termid":"PBO:0057271"}


id: PBO:0077877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 4","termid":"PBO:0077877"}


id: PBO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC144NL antisense RNA 1","termid":"PBO:0042078"}


id: PBO:0073142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog C, vesicle trafficking protein","termid":"PBO:0073142"}


id: GO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by endosomal resident proteases contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"proteolysis within endosome associated with antigen processing and presentation","synonyms":[{"name":"endosomal proteolysis associated with antigen processing and presentation","type":"exact"}],"termid":"GO:0002499"}


id: GO:0050044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose 6-phosphate = D-tagatose 6-phosphate.","definition_xrefs":["EC:5.3.1.26","RHEA:13033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"galactose-6-phosphate isomerase activity","secondary_identifiers":["KEGG_REACTION:R03240","MetaCyc:LACTOSE-6-PHOSPHATE-ISOMERASE-RXN"],"synonyms":[{"name":"D-galactose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-galactose-6-phosphate ketol-isomerase activity","type":"related"}],"termid":"GO:0050044"}


id: GO:0032961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inositol phosphate biosynthetic process","termid":"GO:0010920"},{"relation_name":"is_a","term_name":"regulation of inositol trisphosphate biosynthetic process","termid":"GO:0032960"},{"relation_name":"negatively_regulates","term_name":"inositol trisphosphate biosynthetic process","termid":"GO:0032959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inositol trisphosphate biosynthetic process","synonyms":[{"name":"negative regulation of IP3 biosynthesis","type":"exact"},{"name":"negative regulation of IP3 biosynthetic process","type":"exact"},{"name":"negative regulation of inositol trisphosphate anabolism","type":"exact"},{"name":"negative regulation of inositol trisphosphate biosynthesis","type":"exact"},{"name":"negative regulation of inositol trisphosphate formation","type":"exact"},{"name":"negative regulation of inositol trisphosphate synthesis","type":"exact"},{"name":"negative regulation of myo-inositol trisphosphate biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032961"}


id: GO:0047203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 13-hydroxylupanine + 2-methylcrotonoyl-CoA = 13-(2-methylcrotonoyloxy)lupanine + CoA.","definition_xrefs":["RHEA:12360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"13-hydroxylupinine O-tigloyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8694","KEGG_REACTION:R04205","EC:2.3.1.93"],"synonyms":[{"name":"(E)-2-methylcrotonoyl-CoA:13-hydroxylupinine O-2-methylcrotonoyltransferase activity","type":"related"},{"name":"13-hydroxylupanine acyltransferase activity","type":"related"},{"name":"tigloyl-CoA:13-hydroxylupanine O-tigloyltransferase activity","type":"related"}],"termid":"GO:0047203"}


id: GO:0101007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under salt stress. The stress is usually an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mec"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to salt stress (obsolete GO:0101007)","termid":"GO:0101007"}


id: PR:O74306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.09c","synonyms":[{"name":"Spom972h-rpl502","type":"exact"}],"termid":"PR:O74306"}


id: FYPO:0004023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle","type":"exact"},{"name":"increased duration of protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0004023"}


id: FYPO:0007914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation occurs during mitotic metaphase.","definition_xrefs":["PomBase:vw","PMID:10398680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic sister chromatid separation","termid":"FYPO:0000416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mitotic sister chromatid separation during metaphase","termid":"FYPO:0007914"}


id: PBO:0067550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 700, pseudogene","termid":"PBO:0067550"}


id: GO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological enlargement or overgrowth of all or part of the heart muscle due to an increase in size (not length) of individual cardiac muscle fibers, without cell division, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy in response to stress","termid":"GO:0003299"},{"relation_name":"is_a","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"},{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}


id: PR:Q9USX2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1921.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1921.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.04c","synonyms":[{"name":"Spom972h-SPBC1921.04c","type":"exact"}],"termid":"PR:Q9USX2"}


id: PBO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL4 pseudogene 1","termid":"PBO:0047464"}


id: SO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proplastid sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proplastid_sequence","termid":"SO:0000748"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_gene","synonyms":[{"name":"proplastid gene","type":"exact"}],"termid":"SO:0000096"}


id: PBO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP51A1 antisense RNA 1","termid":"PBO:0044492"}


id: FYPO:0003012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells attempt to undergo mitosis before they have begun to replicate genomic DNA.","definition_xrefs":["PomBase:mah","PMID:11988741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitosis","termid":"FYPO:0001046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"mitosis with unreplicated DNA","termid":"FYPO:0003012"}


id: GO:0044318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + fumarate = alpha-iminosuccinate + succinate.","definition_xrefs":["PMID:20149100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-aspartate:fumarate oxidoreductase activity","secondary_identifiers":["EC:1.4.3.16"],"termid":"GO:0044318"}


id: GO:0102787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-beta-D-caffeoylglucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"caffeoyl-CoA:pelargonidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7997"],"termid":"GO:0102787"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: PBO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 1","termid":"PBO:0060685"}


id: PBO:0054129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1495","termid":"PBO:0054129"}


id: PR:O94481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor TFIIIB component B'' that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22929:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB component B'' (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.14c","secondary_identifiers":["UniProtKB:O94481"],"synonyms":[{"name":"SPCC1919.14c","type":"related"},{"name":"Spom972h-BDP1","type":"exact"},{"name":"tfc5","type":"related"},{"name":"transcription factor TFIIIB complex subunit bdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94481"}


id: PBO:0084206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication","termid":"PBO:0084206"}


id: PBO:0060604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit H2","termid":"PBO:0060604"}


id: PBO:0087982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; catalyzes modification of wobble bases in tRNA anticodons to 2, 5-methoxycarbonylmethyluridine and 5-methoxycarbonylmethyl-2-thiouridine; may act as part of a complex with Trm112p; deletion mutation increases translational infidelity, including amino acid misincorporation and -1 frameshifting, and also confers resistance to zymocin; null mutant displays activation of stress responses","termid":"PBO:0087982"}


id: SO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Ngaro retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in Ngaro are arranged in A-pol-B-A-B order where A and B represent ITRs.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ngaro_YR_retrotransposon","synonyms":[{"name":"Ngaro YR retrotransposon","type":"exact"},{"name":"Ngaro retrotransposon","type":"exact"},{"name":"RYN retrotransposon","type":"exact"}],"termid":"SO:0002288"}


id: PBO:0038308
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation","termid":"PBO:0038308"}


id: PBO:0055258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2685","termid":"PBO:0055258"}


id: GO:0034515
data:
  {"annotated_genes":["SJAG_03638","SJAG_04088"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72752,78418],"is_not":false,"summary":null,"term":"GO:0034515"}]},"cv_name":"cellular_component","definition":"An aggregation of proteasome core protease (CP) and regulatory particle (RP) complexes that localizes in the cytoplasm as dot-like structures when cells are in a quiescent state.","definition_xrefs":["GOC:rb","PMID:30204036","PMID:18504300","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03638":null,"SJAG_04088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proteasome storage granule","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PSG","type":"related"}],"termid":"GO:0034515","terms_by_termid":{"GO:0034515":null}}


id: GO:0035773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin, in response to a glucose stimulus.","definition_xrefs":["PMID:8492079","GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin secretion","termid":"GO:0030073"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"cellular response to glucose stimulus","termid":"GO:0071333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0035773"}


id: PBO:0070141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 55 pseudogene","termid":"PBO:0070141"}


id: FYECO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3'5'-cyclic AMP was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["CHEBI:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,5-cyclic AMP","termid":"FYECO:0000056"}


id: PBO:0091327
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CMD1","termid":"PBO:0091327"}


id: GO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ala and Arg-Val bonds in factor IX to form factor IXa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor XIa activity (obsolete GO:0003805)","synonyms":[{"name":"activated blood-coagulation factor XI","type":"related"},{"name":"activated plasma thromboplastin antecedent","type":"related"},{"name":"blood coagulation factor XI activity","type":"exact"},{"name":"blood-coagulation factor XIa","type":"related"},{"name":"coagulation factor XIa activity","type":"exact"},{"name":"plasma thromboplastin antecedent activity","type":"related"}],"termid":"GO:0003805"}


id: PBO:0004561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf29","termid":"PBO:0004561"}


id: PBO:0003658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z, Pht1","termid":"PBO:0003658"}


id: PBO:0043001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase 3 like 2","termid":"PBO:0043001"}


id: PBO:0055316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2744","termid":"PBO:0055316"}


id: PBO:0085736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription; interacts with RNA polymerase II subunits Rpb2p, Rpb3, and Rpb11p; has similarity to human RPAP1","termid":"PBO:0085736"}


id: PBO:0090687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc53","termid":"PBO:0090687"}


id: PBO:0005688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inner MTOC Attachment site","termid":"PBO:0005688"}


id: FYPO:0003690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing glycerol and ethanol as the carbon sources.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth on glycerol/ethanol carbon source","termid":"FYPO:0000442"},{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0005447","FYPO:0002060","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"abolished cell population growth on glycerol/ethanol carbon source","synonyms":[{"name":"abolished growth on glycerol/ethanol carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on glycerol/ethanol carbon source","type":"exact"},{"name":"cell population growth on glycerol/ethanol carbon source abolished","type":"exact"}],"termid":"FYPO:0003690"}


id: GO:0106300
data:
  {"annotated_genes":["SJAG_02223","SJAG_00406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94469,102461],"is_not":false,"summary":null,"term":"GO:0106300"}]},"cv_name":"biological_process","definition":"The removal of covalent cross-link between DNA and a protein.","definition_xrefs":["PMID:31921408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00406":null,"SJAG_02223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"resolution of protein-DNA covalent cross-linking","type":"exact"}],"termid":"GO:0106300","terms_by_termid":{"GO:0106300":null}}


id: PBO:0081216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MIZ-type containing 1","termid":"PBO:0081216"}


id: GO:0035121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of the tail are generated and organized. The tail is the hindmost part of some animals.","definition_xrefs":["ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete tail morphogenesis (obsolete GO:0035121)","synonyms":[{"name":"tail morphogenesis","type":"exact"}],"termid":"GO:0035121"}


id: PBO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric","termid":"PBO:0015220"}


id: GO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromate sensitivity/resistance (obsolete GO:0019831)","synonyms":[{"name":"chromate sensitivity/resistance","type":"exact"}],"termid":"GO:0019831"}


id: GO:0098642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer that forms networks.","definition_xrefs":["PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"collagen network","termid":"GO:0098645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"network-forming collagen trimer","termid":"GO:0098642"}


id: FYPO:0007661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during metaphase of meiosis I.","definition_xrefs":["PMID:11331883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic metaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic metaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I metaphase","type":"exact"}],"termid":"FYPO:0007661"}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: PBO:0060512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF attachment protein gamma","termid":"PBO:0060512"}


id: PBO:0076983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 1","termid":"PBO:0076983"}


id: GO:0060921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sinoatrial (SA) node cell. SA node cells are pacemaker cells that are found in the sinoatrial node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell differentiation","termid":"GO:0060920"},{"relation_name":"part_of","term_name":"sinoatrial node development","termid":"GO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node cell differentiation","synonyms":[{"name":"SA node cell differentiation","type":"exact"},{"name":"SAN cell differentiation","type":"exact"},{"name":"sinus node cell differentiation","type":"narrow"}],"termid":"GO:0060921"}


id: FYPO:0001293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall biogenesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall biogenesis","synonyms":[{"name":"normal cell wall biogenesis during mitotic cell cycle","type":"related"},{"name":"normal cell wall biogenesis during vegetative growth","type":"exact"},{"name":"normal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0001293"}


id: GO:0097475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.","definition_xrefs":["PMID:20711475","CL:0000100","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"motor neuron migration","termid":"GO:0097475"}


id: MOD:00409
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a formamido group.","definition_xrefs":["OMSSA:44","OMSSA:82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formylated residue","termid":"MOD:00493"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formylated residue","synonyms":[{"name":"Formyl","type":"related"},{"name":"NFoRes","type":"exact"},{"name":"ntermformyl","type":"exact"},{"name":"ntermpepformyl","type":"exact"}],"termid":"MOD:00409"}


id: PR:O74808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.17","synonyms":[{"name":"Spom972h-clr1","type":"exact"}],"termid":"PR:O74808"}


id: MOD:01372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S)-4-hydroxyleucine.","definition_xrefs":["PubMed:363352","PubMed:9164839","RESID:AA0442","ChEBI:141825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated leucine","termid":"MOD:01411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S)-4-hydroxyleucine","synonyms":[{"name":"(2S)-2-amino-4-hydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S)-4-hydroxyleucine","type":"exact"},{"name":"MOD_RES (2S)-4-hydroxyleucine","type":"exact"},{"name":"gamma-hydroxyleucine","type":"exact"}],"termid":"MOD:01372"}


id: PBO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 1","termid":"PBO:0050862"}


id: PBO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A5","termid":"PBO:0039713"}


id: PBO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L16 (predicted)","termid":"PBO:0000294"}


id: PBO:0059976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 21","termid":"PBO:0059976"}


id: PATO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow brown","termid":"PATO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light yellow brown","termid":"PATO:0002413"}


id: PBO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FH2 domain containing 1","termid":"PBO:0047598"}


id: GO:1990953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of vesicles and protein complexes carried out by molecular motors, kinesins and dynein, along the microtubule tracks within the manchette and by myosin along actin filaments.","definition_xrefs":["PMID:26792866","GOC:krc","PMID:22319670","PMID:24440897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"intramanchette transport","synonyms":[{"name":"IMT","type":"related"}],"termid":"GO:1990953"}


id: GO:1903230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any miRNA binding that is involved in posttranscriptional gene silencing.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA binding involved in posttranscriptional gene silencing (obsolete GO:1903230)","synonyms":[{"name":"miRNA binding involved in PTGS","type":"exact"},{"name":"miRNA binding involved in cosuppression","type":"related"},{"name":"miRNA binding involved in post-transcriptional gene silencing","type":"exact"},{"name":"miRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"miRNA binding involved in quelling","type":"exact"},{"name":"microRNA binding involved in PTGS","type":"exact"},{"name":"microRNA binding involved in cosuppression","type":"related"},{"name":"microRNA binding involved in post-transcriptional gene silencing","type":"exact"},{"name":"microRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"microRNA binding involved in quelling","type":"exact"}],"termid":"GO:1903230"}


id: PBO:0047128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 169 member B, pseudogene","termid":"PBO:0047128"}


id: GO:1904164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:22541436"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of triglyceride homeostasis (obsolete GO:1904164)","synonyms":[{"name":"down regulation of triacylglycerol homeostasis","type":"exact"},{"name":"down regulation of triglyceride homeostasis","type":"exact"},{"name":"down-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"down-regulation of triglyceride homeostasis","type":"exact"},{"name":"downregulation of triacylglycerol homeostasis","type":"exact"},{"name":"downregulation of triglyceride homeostasis","type":"exact"},{"name":"inhibition of triacylglycerol homeostasis","type":"narrow"},{"name":"inhibition of triglyceride homeostasis","type":"narrow"},{"name":"negative regulation of triacylglycerol homeostasis","type":"exact"}],"termid":"GO:1904164"}


id: PBO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex assembly protein Cbp6 (predicted)","termid":"PBO:0003282"}


id: PBO:0039809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF4 antisense RNA 1","termid":"PBO:0039809"}


id: CHEBI:3312
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium dichloride","termid":"CHEBI:3312"}


id: GO:0071830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a triglyceride-rich lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}


id: PBO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin ligase E3 (predicted)","termid":"PBO:0015240"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: PBO:0077481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 201","termid":"PBO:0077481"}


id: PBO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4 (predicted)","termid":"PBO:0001169"}


id: PBO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 15","termid":"PBO:0072198"}


id: GO:0038022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","PMID:21041441","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"olfactory receptor activity","termid":"GO:0004984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled olfactory receptor activity","synonyms":[{"name":"G-protein coupled odorant receptor activity","type":"exact"},{"name":"G-protein coupled olfactory receptor activity","type":"exact"},{"name":"odorant receptor activity, G-protein coupled","type":"narrow"},{"name":"olfactory receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0038022"}


id: PBO:0048749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 2","termid":"PBO:0048749"}


id: GO:0002064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell development","termid":"GO:0002064"}


id: GO:0005646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin (obsolete GO:0005646)","synonyms":[{"name":"importin","type":"exact"},{"name":"karyopherin","type":"exact"}],"termid":"GO:0005646"}


id: PBO:0043879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein like 2","termid":"PBO:0043879"}


id: FYPO:0002912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated multinucleate cell","synonyms":[{"name":"inviable after spore germination, multinucleate elongated cell","type":"exact"},{"name":"inviable after spore germination, undivided elongated multinucleate cell","type":"exact"},{"name":"inviable following spore germination, without cell division, elongated multinucleate cell","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated multinucleate cell","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated multinucleate cell","type":"exact"}],"termid":"FYPO:0002912"}


id: GO:1900692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"regulation of (+)-kotanin anabolism","type":"exact"},{"name":"regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"regulation of (+)-kotanin formation","type":"exact"},{"name":"regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900692"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["MetaCyc:SUCUTIL-PWY","GOC:dgf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: PBO:0083197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene KNS1","termid":"PBO:0083197"}


id: PBO:0069019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 263, pseudogene","termid":"PBO:0069019"}


id: PBO:0069112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 361, pseudogene","termid":"PBO:0069112"}


id: PBO:0091276
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type Cyclin Pombe","termid":"PBO:0091276"}


id: PBO:0003070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex beta subunit Tfg2 (predicted)","termid":"PBO:0003070"}


id: GO:1905548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:BHF_telomere","GOC:nc","PMID:25819580","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of subtelomeric heterochromatin assembly (obsolete GO:1905548)","synonyms":[{"name":"down regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down regulation of telomeric heterochromatin formation","type":"related"},{"name":"down-regulation of telomeric heterochromatin assembly","type":"related"},{"name":"down-regulation of telomeric heterochromatin formation","type":"related"},{"name":"downregulation of telomeric heterochromatin assembly","type":"related"},{"name":"downregulation of telomeric heterochromatin formation","type":"related"},{"name":"inhibition of telomeric heterochromatin assembly","type":"narrow"},{"name":"inhibition of telomeric heterochromatin formation","type":"narrow"},{"name":"negative regulation of telomeric heterochromatin assembly","type":"related"},{"name":"negative regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905548"}


id: PR:Q9Y820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pci2 gene.","definition_xrefs":["UniProtKB:Q9Y820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain-containing protein C1105.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.07c","synonyms":[{"name":"Spom972h-pci2","type":"exact"}],"termid":"PR:Q9Y820"}


id: PBO:0061866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteomodulin","termid":"PBO:0061866"}


id: PBO:0004420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease, predicted Meu22","termid":"PBO:0004420"}


id: _global:finished_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Xy is finished_by Y if Y part of X, and X and Y share a 3' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_by","termid":"_global:finished_by"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: PBO:0058795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR7515 host gene","termid":"PBO:0058795"}


id: PBO:0059092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC family CW-type zinc finger 4","termid":"PBO:0059092"}


id: PR:O94570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A valine--pyruvate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C1773.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.13","secondary_identifiers":["UniProtKB:O94570"],"synonyms":[{"name":"Spom972h-avtA","type":"exact"}],"termid":"PR:O94570"}


id: PBO:0053486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 461","termid":"PBO:0053486"}


id: PBO:0012262
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPM1","termid":"PBO:0012262"}


id: PBO:0078436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-6","termid":"PBO:0078436"}


id: PBO:0081401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF248 antisense RNA 1","termid":"PBO:0081401"}


id: PBO:0058187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4480","termid":"PBO:0058187"}


id: PR:Q10305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rab GDP dissociation inhibitor beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway GDP dissociation inhibitor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.12c","secondary_identifiers":["UniProtKB:Q10305"],"synonyms":[{"name":"SPAC22H10.12c","type":"related"},{"name":"Spom972h-GDI2","type":"exact"},{"name":"sec19","type":"related"}],"termid":"PR:Q10305"}


id: PBO:0056151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MACC1 antisense RNA 1","termid":"PBO:0056151"}


id: PBO:0017909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter (predicted)","termid":"PBO:0017909"}


id: PBO:0059670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 36","termid":"PBO:0059670"}


id: PBO:0080315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 79 pseudogene","termid":"PBO:0080315"}


id: PBO:0087805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tap42p-interacting protein; negative regulator of the TORC1 signaling pathway that activates the type 2A-related phosphatase Sit4p by binding and antagonizing Tap42p, a SIT4 inhibitor; proposed to be part of a feedback loop to amplify Sit4p activity when TORC1 is inactivated; protein abundance increases in response to DNA replication stress","termid":"PBO:0087805"}


id: PBO:0073470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 5","termid":"PBO:0073470"}


id: PATO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of single process inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity of occurrent","termid":"PATO:0001637"}


id: GO:0033522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of one or more ubiquitin groups.","definition_xrefs":["PMID:16473935","PMID:15509584","GOC:mah","PMID:18430235","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A ubiquitination (obsolete GO:0033522)","termid":"GO:0033522"}


id: PBO:0087361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation protein required for prospore membrane formation; required for prospore membrane formation at selected spindle poles; ensures functionality of all four spindle pole bodies during meiosis II; not required for meiotic recombination or meiotic chromosome segregation","termid":"PBO:0087361"}


id: PBO:0052952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KTI12 chromatin associated homolog","termid":"PBO:0052952"}


id: GO:0030958
data:
  {"annotated_genes":["SJAG_02621","SJAG_03916","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87178,108753,114797],"is_not":false,"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"A protein complex required for heterochromatin assembly; contains an Argonaute homolog, a chromodomain protein, and at least one additional protein; named for RNA-induced initiation of transcriptional gene silencing.","definition_xrefs":["PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi effector complex","termid":"GO:0031332"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_03916":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RITS complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030958","terms_by_termid":{"GO:0030958":null}}


id: GO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular polysaccharide biosynthetic process","termid":"GO:0045226"},{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"capsule polysaccharide biosynthetic process","synonyms":[{"name":"capsular polysaccharide biosynthesis","type":"exact"},{"name":"capsular polysaccharide biosynthetic process","type":"exact"},{"name":"capsule polysaccharide anabolism","type":"exact"},{"name":"capsule polysaccharide biosynthesis","type":"exact"},{"name":"capsule polysaccharide formation","type":"exact"},{"name":"capsule polysaccharide synthesis","type":"exact"}],"termid":"GO:0045227"}


id: CHEBI:26710
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An inorganic chloride salt having sodium(1+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium chloride","termid":"CHEBI:26710"}


id: PBO:0055672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase B, lysosomal acid type","termid":"PBO:0055672"}


id: GO:0008046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger and transmitting the signal from one side of the membrane to the other to results in a change in cellular activity involved in axon guidance.","definition_xrefs":["PMID:15339666","GOC:dph","GOC:tb","GOC:signaling","PMID:15107857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"axon guidance receptor activity","synonyms":[{"name":"receptor activity involved in axon guidance","type":"exact"}],"termid":"GO:0008046"}


id: MOD:00190
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to dehydrobutyrine.","definition_xrefs":["OMSSA:141","Unimod:23#T","RESID:AA0182","PubMed:3769923","DeltaMass:0","OMSSA:97","OMSSA:164","PubMed:1547888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","termid":"MOD:00416"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"dehydrobutyrine","termid":"MOD:01703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"Dhb(Thr)","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"beta-elim-t","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"},{"name":"phospholosst","type":"exact"}],"termid":"MOD:00190"}


id: PBO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIb","termid":"PBO:0047449"}


id: PBO:0075344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin 1","termid":"PBO:0075344"}


id: FYPO:0006149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to idarubicin. Cells stop growing (and may die) at a concentration of idarubicin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to idarubicin","synonyms":[{"name":"hypersensitive to idarubicin","type":"exact"},{"name":"sensitive to idarubicin during mitotic cell cycle","type":"related"},{"name":"sensitive to idarubicin during vegetative growth","type":"exact"}],"termid":"FYPO:0006149"}


id: GO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triethanolamine = diethanolamine + acetaldehyde.","definition_xrefs":["UM-BBD_enzymeID:e0421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"triethanolamine lyase activity","termid":"GO:0018825"}


id: FYPO:0002714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the Golgi apparatus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to Golgi apparatus","synonyms":[{"name":"ectopic protein localization to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus during vegetative growth","type":"exact"},{"name":"protein mislocalized to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002714"}


id: SO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a glutamic acid anticodon, and a 3' glutamic acid binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"glutamine_tRNA_primary_transcript","termid":"SO:0000217"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl_tRNA","synonyms":[{"name":"glutamyl tRNA","type":"exact"},{"name":"glutamyl-transfer RNA","type":"related"},{"name":"glutamyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000260"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PBO:0064025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 59","termid":"PBO:0064025"}


id: PBO:0072479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 8","termid":"PBO:0072479"}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: GO:0008363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based larval cuticle. The insect larval cuticle is a secretion from epidermal cells that is shed at each molt. An example of this is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development involved in chitin-based cuticle molting cycle","termid":"GO:0042337"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval chitin-based cuticle development","synonyms":[{"name":"larval cuticle anabolism","type":"broad"},{"name":"larval cuticle biosynthetic process","type":"broad"},{"name":"larval cuticle formation","type":"broad"},{"name":"larval cuticle synthesis","type":"broad"}],"termid":"GO:0008363"}


id: PBO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6","termid":"PBO:0048142"}


id: PBO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 1","termid":"PBO:0044527"}


id: PBO:0056216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEB17 antisense RNA 1","termid":"PBO:0056216"}


id: PBO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035711"}


id: PBO:0052997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2","termid":"PBO:0052997"}


id: GO:0038203
data:
  {"annotated_genes":["SJAG_04206","SJAG_01320","SJAG_04460","SJAG_05030","SJAG_00117","SJAG_04987","SJAG_03067","SJAG_06588","SJAG_00143","SJAG_01020"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76049,76535,95571,98010,103070,105013],"is_not":false,"summary":null,"term":"GO:0038203"},{"annotations":[112970],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903940"},{"annotations":[93895,103385,87099],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"A series of intracellular molecular signals mediated by TORC2; TOR (rapamycin-insensitive companion of TOR) in complex with at least Rictor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00143":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_03067":null,"SJAG_04206":null,"SJAG_04460":null,"SJAG_04987":null,"SJAG_05030":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TORC2 signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TORC2 signal transduction","type":"exact"}],"termid":"GO:0038203","terms_by_termid":{"GO:0038203":null,"GO:1903940":null,"GO:1904515":null}}


id: PBO:0055771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 1","termid":"PBO:0055771"}


id: GO:0010901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"regulation of VLDL remodeling","type":"exact"},{"name":"regulation of VLDL remodelling","type":"exact"},{"name":"regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010901"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: FYPO:0001585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cell tip during vegetative growth","synonyms":[{"name":"abolished protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell end during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"protein localization to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001585"}


id: PBO:0066258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 1","termid":"PBO:0066258"}


id: MOD:00250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-lysine residue to form L-lysine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,5-diaminopentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,5-bis(azanyl)pentyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"L-lysine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00250"}


id: GO:0097634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of phagophore assembly site membrane (obsolete GO:0097634)","synonyms":[{"name":"integral to phagophore assembly site membrane","type":"narrow"},{"name":"phagophore assembly site integral membrane protein","type":"related"}],"termid":"GO:0097634"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: PBO:0003568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane receptor Wsc1 (predicted)","termid":"PBO:0003568"}


id: GO:1905182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urease activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:16244137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of urease activity","termid":"GO:1905181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urease activity","synonyms":[{"name":"activation of urea amidohydrolase activity","type":"narrow"},{"name":"activation of urease activity","type":"narrow"},{"name":"positive regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urease activity","type":"exact"},{"name":"up-regulation of urea amidohydrolase activity","type":"exact"},{"name":"up-regulation of urease activity","type":"exact"},{"name":"upregulation of urea amidohydrolase activity","type":"exact"},{"name":"upregulation of urease activity","type":"exact"}],"termid":"GO:1905182"}


id: PBO:0061368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 28","termid":"PBO:0061368"}


id: GO:1900324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltotriulose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltotriulose transport","termid":"GO:2001090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of maltotriulose transport","termid":"GO:1900324"}


id: GO:0045004
data:
  {"annotated_genes":["SJAG_02908","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73704,74457],"is_not":false,"summary":null,"term":"GO:0045004"}]},"cv_name":"biological_process","definition":"Correction of replication errors by DNA polymerase using a 3'-5' exonuclease activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA replication proofreading","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0045004","terms_by_termid":{"GO:0045004":null}}


id: GO:0046308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Z-phenylacetaldoxime metabolic process","termid":"GO:0018983"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Z-phenylacetaldoxime catabolic process","synonyms":[{"name":"Z-phenylacetaldoxime breakdown","type":"exact"},{"name":"Z-phenylacetaldoxime catabolism","type":"exact"},{"name":"Z-phenylacetaldoxime degradation","type":"exact"}],"termid":"GO:0046308"}


id: PBO:0030572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_phenylalanine_level","termid":"PBO:0030572"}


id: PBO:0077815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 11","termid":"PBO:0077815"}


id: MOD:01173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:12626404","RESID:AA0425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAsn","type":"exact"},{"name":"LIPID GPI-like-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01173"}


id: PBO:0079077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-5","termid":"PBO:0079077"}


id: MOD:01164
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a riboflavin phosphate (flavin mononucleotide, FMN) group through a phosphodiester bond.","definition_xrefs":["Unimod:442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin-phosphoryl","synonyms":[{"name":"FMN","type":"related"},{"name":"O3-(riboflavin phosphoryl)","type":"related"}],"termid":"MOD:01164"}


id: PBO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0004186"}


id: GO:0015121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:inorganic phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transporter activity","termid":"GO:0089721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"phosphoenolpyruvate:phosphate antiporter activity","synonyms":[{"name":"PPT","type":"broad"},{"name":"phosphoenolpyruvate/phosphate translocator","type":"exact"}],"termid":"GO:0015121"}


id: GO:1905144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21238497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acetylcholine","termid":"GO:1905144"}


id: GO:0050277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + sedoheptulose = ADP + 2 H+ + sedoheptulose 7-phosphate.","definition_xrefs":["EC:2.7.1.14","RHEA:23844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"sedoheptulokinase activity","secondary_identifiers":["KEGG_REACTION:R01844","MetaCyc:SEDOHEPTULOKINASE-RXN","Reactome:R-HSA-8959719"],"synonyms":[{"name":"ATP:sedoheptulose 7-phosphotransferase activity","type":"related"},{"name":"heptulokinase activity","type":"related"},{"name":"sedoheptulokinase (phosphorylating)","type":"related"}],"termid":"GO:0050277"}


id: PBO:0042146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4 like 2","termid":"PBO:0042146"}


id: GO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated protein kinase signaling cascade","termid":"GO:0070302"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress-activated protein kinase signaling cascade","synonyms":[{"name":"activation of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"positive regulation of SAPK signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"positive regulation of stress-activated protein kinase signalling pathway","type":"exact"},{"name":"stimulation of stress-activated protein kinase signaling pathway","type":"narrow"},{"name":"up regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"up-regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"upregulation of stress-activated protein kinase signaling pathway","type":"exact"}],"termid":"GO:0070304"}


id: SO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the T7 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T7_RNA_Polymerase_Promoter","synonyms":[{"name":"T7 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001207"}


id: FYPO:0000705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein-protein interaction","synonyms":[{"name":"abolished protein binding","type":"exact"},{"name":"protein binding abolished","type":"exact"}],"termid":"FYPO:0000705"}


id: GO:0031035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a filament composed of myosin molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"myosin filament disassembly","synonyms":[{"name":"myosin depolymerization","type":"related"}],"termid":"GO:0031035"}


id: PBO:0075701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1IP1 pseudogene 1","termid":"PBO:0075701"}


id: FYECO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3MB-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3MB-PP1","termid":"FYECO:0000244"}


id: PBO:0029191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_intracellular_endomembrane_system_present","termid":"PBO:0029191"}


id: PBO:0013749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tuberous Sclerosis Complex","termid":"PBO:0013749"}


id: PBO:0082485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carnitine acetyl-CoA transferase; present in both mitochondria and peroxisomes; transfers activated acetyl groups to carnitine to form acetylcarnitine which can be shuttled across membranes","termid":"PBO:0082485"}


id: PBO:0044150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCCTC-binding factor like","termid":"PBO:0044150"}


id: PBO:0109620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 14 pseudogene","termid":"PBO:0109620"}


id: GO:0052862
data:
  {"annotated_genes":["SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90076,96349],"is_not":false,"summary":null,"term":"GO:0052862"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3.","definition_xrefs":["EC:3.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.6-RXN"],"synonyms":[{"name":"1,3-(1,4)-beta-D-glucan 4-glucanohydrolase activity","type":"related"},{"name":"laminaranase activity","type":"related"},{"name":"laminarinase activity","type":"related"}],"termid":"GO:0052862","terms_by_termid":{"GO:0052862":null}}


id: PR:Q09822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.05c","synonyms":[{"name":"Spom972h-cdc15","type":"exact"}],"termid":"PR:Q09822"}


id: GO:0070871
data:
  {"annotated_genes":["SJAG_01888","SJAG_01171","SJAG_00667","SJAG_01017","SJAG_05001","SJAG_03444","SJAG_02718","SJAG_03646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90072,84100,98202,98203,84955,104499,107831,96343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A process of cell wall organization that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0000747","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall organization involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall organisation involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0070871","terms_by_termid":{"GO:1904541":null}}


id: PBO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 1","termid":"PBO:0050958"}


id: PBO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd2","termid":"PBO:0002443"}


id: PBO:0012062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of Ofd1, Nro1","termid":"PBO:0012062"}


id: GO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=3 symmetry. The T=3 capsid is composed of 12 pentameric and 20 hexameric capsomeres.","definition_xrefs":["VZ:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=3 icosahedral viral capsid","termid":"GO:0039617"}


id: FYPO:0006317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the second meiotic nuclear division.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis II","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0006317"}


id: GO:0019072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral genome within the capsid.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome packaging","termid":"GO:0019072"}


id: GO:0141053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2A substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0016740","GO:0004842","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}


id: GO:1990001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of an inactive cysteine-type endopeptidase involved in an apoptotic process.","definition_xrefs":["PMID:11943137","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043154"},{"relation_name":"is_a","term_name":"inhibition of cysteine-type endopeptidase activity","termid":"GO:0097340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"inhibition of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:1990001"}


id: GO:1901697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of olivetolic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"olivetolic acid biosynthetic process","synonyms":[{"name":"olivetolic acid anabolism","type":"exact"},{"name":"olivetolic acid biosynthesis","type":"exact"},{"name":"olivetolic acid formation","type":"exact"},{"name":"olivetolic acid synthesis","type":"exact"}],"termid":"GO:1901697"}


id: PBO:0081104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 2 pseudogene 1","termid":"PBO:0081104"}


id: PBO:0053552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 559","termid":"PBO:0053552"}


id: PBO:0045432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like 2","termid":"PBO:0045432"}


id: GO:0043202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the lysosomal membrane.","definition_xrefs":["PMID:15213228","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"lysosomal lumen","termid":"GO:0043202"}


id: PBO:0068876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 116, pseudogene","termid":"PBO:0068876"}


id: PBO:0062697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 1 pseudogene","termid":"PBO:0062697"}


id: PBO:0039360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 2","termid":"PBO:0039360"}


id: GO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of crotonyl-CoA to butyryl-CoA.","definition_xrefs":["InterPro:IPR010085","PMID:11162231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"crotonyl-CoA reductase activity","synonyms":[{"name":"CCR","type":"exact"},{"name":"crotonyl-coenzyme A reductase activity","type":"exact"}],"termid":"GO:0043880"}


id: PBO:0042530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 pseudogene 1","termid":"PBO:0042530"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: PBO:0055801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 3","termid":"PBO:0055801"}


id: PR:Q09766
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 63C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C24H6.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.13","secondary_identifiers":["UniProtKB:Q09766"],"synonyms":[{"name":"Spom972h-TMEM63C","type":"exact"}],"termid":"PR:Q09766"}


id: PBO:0088987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane anchored ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0088987"}


id: GO:0099532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which synaptic vesicles fuse to the presynaptic endosome followed by sorting of synaptic vesicle components and budding of new synaptic vesicles.","definition_xrefs":["GOC:bc","GOC:aruk","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle endosomal processing","synonyms":[{"name":"synaptic vesicle processing via endosome","type":"exact"}],"termid":"GO:0099532"}


id: GO:0033443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AAA codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033443"}


id: PBO:0072435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 9","termid":"PBO:0072435"}


id: PBO:0045063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 3","termid":"PBO:0045063"}


id: FYPO:0003011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased.","definition_xrefs":["PMID:23936074","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin","synonyms":[{"name":"increased protein localisation to chromatin","type":"exact"},{"name":"increased protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003011"}


id: MOD:00395
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioester bond between a cysteine thiol and either an alpha-carbonyl, as in S-(L-methionyl-L-cysteine), or a sidechain carbonyl, as in S-(L-isoglutamyl)-L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioester crosslinked residues","termid":"MOD:00395"}


id: PBO:0048461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase 1","termid":"PBO:0048461"}


id: RO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","termid":"RO:0000091"}


id: PBO:0071585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 1","termid":"PBO:0071585"}


id: PBO:0061372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 32","termid":"PBO:0061372"}


id: PBO:0028142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0028142"}


id: PR:Q9P6P0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf3 gene.","definition_xrefs":["UniProtKB:Q9P6P0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.06","synonyms":[{"name":"Spom972h-taf3","type":"exact"},{"name":"TBP-associated factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P0"}


id: GO:2000973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pro-B cell differentiation","synonyms":[{"name":"regulation of pro-B cell development","type":"related"},{"name":"regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000973"}


id: PBO:0068107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 414","termid":"PBO:0068107"}


id: RO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is partially an endoparasite and partially an ectoparasite","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoparasite_of","termid":"RO:0002636"}


id: FYPO:0005903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins, but stops before the ring completely constricts and is disassembled.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"incomplete actomyosin contractile ring contraction","synonyms":[{"name":"incomplete actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"incomplete actomyosin contractile ring contraction during vegetative growth","type":"exact"}],"termid":"FYPO:0005903"}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: PBO:0040060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 5","termid":"PBO:0040060"}


id: GO:0061835
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The surface of a migrating cell that is in contact with the substratum or cell layer.","definition_xrefs":["PMID:11598004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"ventral surface of cell","termid":"GO:0061835"}


id: GO:0018560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-sulfocatechol + O2 = 3-sulfomuconate.","definition_xrefs":["UM-BBD_reactionID:r0581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protocatechuate 3,4-dioxygenase type II activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018560"}


id: PBO:0045114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublesex and mab-3 related transcription factor 1","termid":"PBO:0045114"}


id: GO:0043442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"},{"relation_name":"is_a","term_name":"acetoacetic acid metabolic process","termid":"GO:0043438"},{"relation_name":"is_a","term_name":"ketone body catabolic process","termid":"GO:0046952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0006091","GO:0044248"],"is_obsolete":false,"name":"acetoacetic acid catabolic process","synonyms":[{"name":"acetoacetic acid breakdown","type":"exact"},{"name":"acetoacetic acid catabolism","type":"exact"},{"name":"acetoacetic acid degradation","type":"exact"}],"termid":"GO:0043442"}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:TermGenie","PMID:20179351","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type peptidase activity","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: PBO:0072424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 29","termid":"PBO:0072424"}


id: PBO:0074862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 48","termid":"PBO:0074862"}


id: PBO:0053242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 6","termid":"PBO:0053242"}


id: GO:0031455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine betaine, N-trimethylglycine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycine betaine metabolic process","synonyms":[{"name":"N-trimethylglycine metabolic process","type":"exact"},{"name":"N-trimethylglycine metabolism","type":"exact"},{"name":"glycine betaine metabolism","type":"exact"}],"termid":"GO:0031455"}


id: PBO:0081796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726","termid":"PBO:0081796"}


id: PBO:0039890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP44 and MYOCD antisense RNA 1","termid":"PBO:0039890"}


id: PBO:0069481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 748, pseudogene","termid":"PBO:0069481"}


id: FYPO:0004534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ascospore release from an ascus begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:16751704","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature ascospore release from ascus","synonyms":[{"name":"advanced ascospore release from ascus","type":"exact"},{"name":"accelerated ascospore release from ascus","type":"related"}],"termid":"FYPO:0004534"}


id: GO:0032600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor out of a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"chemokine receptor transport within lipid bilayer","termid":"GO:0033606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chemokine receptor transport out of membrane raft","synonyms":[{"name":"chemokine receptor translocation out of membrane raft","type":"exact"},{"name":"chemokine receptor transport out of lipid raft","type":"exact"}],"termid":"GO:0032600"}


id: GO:0097105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:15797875","PMID:18550748","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"presynaptic membrane organization","termid":"GO:0097090"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynaptic membrane assembly","synonyms":[{"name":"pre-synaptic membrane assembly","type":"exact"}],"termid":"GO:0097105"}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: GO:0055037
data:
  {"annotated_genes":["SJAG_04343","SJAG_01448","SJAG_04616","SJAG_03915","SJAG_00521","SJAG_01645","SJAG_01456"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70926,76489,85184,85703,98927],"is_not":false,"summary":null,"term":"GO:0055037"},{"annotations":[93278],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990745"},{"annotations":[99788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055038"}]},"cv_name":"cellular_component","definition":"An organelle consisting of a network of tubules that functions in targeting molecules, such as receptors transporters and lipids, to the plasma membrane.","definition_xrefs":["PMID:21562044","GOC:dph","PMID:10930469","PMID:21556374","GOC:rph","GOC:jid","GOC:kmv","PMID:15601896","PMID:16246101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00521":null,"SJAG_01448":null,"SJAG_01456":null,"SJAG_01645":null,"SJAG_03915":null,"SJAG_04343":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"recycling endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ERC","type":"related"},{"name":"endosomal recycling compartment","type":"exact"},{"name":"endosome recycling compartment","type":"related"}],"termid":"GO:0055037","terms_by_termid":{"GO:0055037":null,"GO:0055038":null,"GO:1990745":null}}


id: PBO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase subunit Emi5 (predicted)","termid":"PBO:0002591"}


id: GO:0042395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old collagen and cuticulin-based cuticle fragments during the molting cycle. Examples of this process are found in invertebrates.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, collagen and cuticulin-based cuticle","termid":"GO:0042395"}


id: PBO:0065881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB31, member RAS oncogene family","termid":"PBO:0065881"}


id: PBO:0083247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified based on homology to hemiascomycetous yeasts","termid":"PBO:0083247"}


id: PBO:0087487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C); a complex which methylates histone H3 on lysine 4 and is required in telomeric transcriptional silencing; promotes meiotic DSB formation by interacting with H3K4me3 and Rec107p, a protein required for Spo11p-catalyzed DSB formation located on chromosome axes; interacts with Orc2p; PHD finger domain protein similar to human CGBP, an unmethylated CpG binding protein; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087487"}


id: PBO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRM-containing cyclophilin regulating transcription Rct1","termid":"PBO:0003942"}


id: PBO:0044709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10","termid":"PBO:0044709"}


id: PR:O94292
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L38, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.07","secondary_identifiers":["UniProtKB:O94292"],"synonyms":[{"name":"Spom972h-rplN","type":"exact"}],"termid":"PR:O94292"}


id: GO:0043243
data:
  {"annotated_genes":["SJAG_02812","SJAG_05265","SJAG_02433","SJAG_04312","SJAG_03126","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[98102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[108497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[66684,90871,68629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02433":null,"SJAG_02812":null,"SJAG_03126":null,"SJAG_04312":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex disassembly","type":"narrow"},{"name":"positive regulation of protein complex disassembly","type":"related"},{"name":"stimulation of protein complex disassembly","type":"narrow"},{"name":"up regulation of protein complex disassembly","type":"exact"},{"name":"up-regulation of protein complex disassembly","type":"exact"},{"name":"upregulation of protein complex disassembly","type":"exact"}],"termid":"GO:0043243","terms_by_termid":{"GO:0031117":null,"GO:0045905":null,"GO:1901098":null,"GO:1904595":null}}


id: GO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"spermidine:coumaroyl CoA N-acyltransferase activity","termid":"GO:0080073"}


id: PBO:0070684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 55","termid":"PBO:0070684"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: FYPO:0001931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to gamma radiation is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to gamma radiation. The most common abnormality is for the cell cycle to progress as in the absence of gamma radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to gamma radiation","termid":"FYPO:0001930"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to gamma radiation","synonyms":[{"name":"abnormal mitotic cell cycle delay following gamma radiation","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to gamma radiation","type":"exact"}],"termid":"FYPO:0001931"}


id: PBO:0062821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive serine rich 1","termid":"PBO:0062821"}


id: PBO:0079031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-4","termid":"PBO:0079031"}


id: PATO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000832 relative visual acuity value (obsolete PATO:0000832)","termid":"PATO:0000832"}


id: PR:Q09802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cum1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C22G7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.11c","synonyms":[{"name":"Spom972h-cum1","type":"exact"}],"termid":"PR:Q09802"}


id: PBO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 2","termid":"PBO:0043588"}


id: GO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipopolysaccharide transport","secondary_identifiers":["GO:0015921"],"synonyms":[{"name":"LPS export","type":"narrow"},{"name":"LPS transport","type":"exact"},{"name":"lipopolysaccharide export","type":"narrow"}],"termid":"GO:0015920"}


id: GO:1900847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900846"},{"relation_name":"negatively_regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"down regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"down-regulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"downregulation of naphtho-gamma-pyrone biosynthetic process","type":"exact"},{"name":"inhibition of naphtho-gamma-pyrone biosynthetic process","type":"narrow"}],"termid":"GO:1900847"}


id: PBO:0056087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 96","termid":"PBO:0056087"}


id: PR:Q9UTJ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu1-1 gene.","definition_xrefs":["UniProtKB:Q9UTJ3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 1/2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.06","synonyms":[{"name":"Spom972h-meu1-1","type":"exact"}],"termid":"PR:Q9UTJ3"}


id: GO:0061767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that decreases the force with which blood travels through the lungs.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:bc","GOC:dph","PMID:22161164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lung blood pressure","termid":"GO:0014916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung blood pressure","synonyms":[{"name":"negative regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0061767"}


id: PBO:0056424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCO like","termid":"PBO:0056424"}


id: PR:Q92370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp1 gene.","definition_xrefs":["UniProtKB:Q92370","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional tryptophan biosynthesis protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.09c","synonyms":[{"name":"Spom972h-trp1","type":"exact"}],"termid":"PR:Q92370"}


id: PBO:0038401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property_(not_for_use_in_curation)","termid":"PBO:0038401"}


id: PBO:0027672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore_with_abnormal_shape","termid":"PBO:0027672"}


id: PBO:0079333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 19","termid":"PBO:0079333"}


id: PBO:0039784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 11","termid":"PBO:0039784"}


id: FYPO:0000303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased conjugation frequency","synonyms":[{"name":"decreased conjugation efficiency","type":"related"},{"name":"decreased mating frequency","type":"exact"},{"name":"decreased occurrence of mating","type":"exact"},{"name":"reduced conjugation efficiency","type":"related"},{"name":"reduced conjugation frequency","type":"exact"},{"name":"reduced zygote formation","type":"related"}],"termid":"FYPO:0000303"}


id: PBO:0048120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 1 (H blood group)","termid":"PBO:0048120"}


id: PBO:0061840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxoguanine DNA glycosylase","termid":"PBO:0061840"}


id: GO:1903780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac conduction.","definition_xrefs":["PMID:12967627","GOC:rph","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"negatively_regulates","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac conduction","synonyms":[{"name":"down regulation of cardiac conduction","type":"exact"},{"name":"down-regulation of cardiac conduction","type":"exact"},{"name":"downregulation of cardiac conduction","type":"exact"},{"name":"inhibition of cardiac conduction","type":"narrow"}],"termid":"GO:1903780"}


id: PBO:0065014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 1","termid":"PBO:0065014"}


id: PBO:0067041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 58, pseudogene","termid":"PBO:0067041"}


id: PBO:0091859
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the S. japonicus gene is about 500 amino acids longer...possibly a gene merge in S. japonicus as this does not splice to adjacent gene","termid":"PBO:0091859"}


id: GO:0043058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the speed, mechanical force, or rhythm of the posterior movement of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of backward locomotion","termid":"GO:0043058"}


id: PBO:0065398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 3","termid":"PBO:0065398"}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["PMID:17564681","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


